##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM321347v1 #!genome-build-accession NCBI_Assembly:GCF_003213475.1 #!annotation-date 10/05/2022 17:57:43 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP029015.1 1 244201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=336810 NZ_CP029015.1 RefSeq region 1 244201 . + . ID=NZ_CP029015.1:1..244201;Dbxref=taxon:336810;Is_circular=true;Name=ANONYMOUS;collected-by=Takashi Kanbe;collection-date=2014-09-07;country=Japan: Hokkaido%2C Sapporo;gbkey=Src;genome=chromosome;isolate=SMKOSYEZ;mol_type=genomic DNA;nat-host=Kosemia yezoensis NZ_CP029015.1 RefSeq gene 1 675 . + . ID=gene-DDE69_RS00005;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=DDE69_RS00005 NZ_CP029015.1 Protein Homology CDS 1 675 . + 0 ID=cds-WP_110480510.1;Parent=gene-DDE69_RS00005;Dbxref=Genbank:WP_110480510.1;Name=WP_110480510.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038468.1;locus_tag=DDE69_RS00005;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_110480510.1;transl_table=11 NZ_CP029015.1 RefSeq gene 778 999 . - . ID=gene-DDE69_RS00010;Name=DDE69_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00010 NZ_CP029015.1 Protein Homology CDS 778 999 . - 0 ID=cds-WP_262494485.1;Parent=gene-DDE69_RS00010;Dbxref=Genbank:WP_262494485.1;Name=WP_262494485.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012432.2;locus_tag=DDE69_RS00010;product=hypothetical protein;protein_id=WP_262494485.1;transl_table=11 NZ_CP029015.1 RefSeq gene 1135 1344 . + . ID=gene-DDE69_RS00015;Name=DDE69_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00015 NZ_CP029015.1 GeneMarkS-2+ CDS 1135 1344 . + 0 ID=cds-WP_162616548.1;Parent=gene-DDE69_RS00015;Dbxref=Genbank:WP_162616548.1;Name=WP_162616548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00015;product=YidC/Oxa1 family membrane protein insertase;protein_id=WP_162616548.1;transl_table=11 NZ_CP029015.1 RefSeq gene 1486 1854 . + . ID=gene-DDE69_RS00020;Name=DDE69_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00020 NZ_CP029015.1 GeneMarkS-2+ CDS 1486 1854 . + 0 ID=cds-WP_110480513.1;Parent=gene-DDE69_RS00020;Dbxref=Genbank:WP_110480513.1;Name=WP_110480513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00020;product=hypothetical protein;protein_id=WP_110480513.1;transl_table=11 NZ_CP029015.1 RefSeq gene 2263 4884 . + . ID=gene-DDE69_RS00030;Name=DDE69_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00030 NZ_CP029015.1 Protein Homology CDS 2263 4884 . + 0 ID=cds-WP_110480515.1;Parent=gene-DDE69_RS00030;Dbxref=Genbank:WP_110480515.1;Name=WP_110480515.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840972.1;locus_tag=DDE69_RS00030;product=valine--tRNA ligase;protein_id=WP_110480515.1;transl_table=11 NZ_CP029015.1 RefSeq gene 4881 5996 . + . ID=gene-DDE69_RS00035;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=DDE69_RS00035 NZ_CP029015.1 Protein Homology CDS 4881 5996 . + 0 ID=cds-WP_110480516.1;Parent=gene-DDE69_RS00035;Dbxref=Genbank:WP_110480516.1;Name=WP_110480516.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783985.1;locus_tag=DDE69_RS00035;product=DNA polymerase III subunit beta;protein_id=WP_110480516.1;transl_table=11 NZ_CP029015.1 RefSeq gene 5993 8035 . + . ID=gene-DDE69_RS00040;Name=DDE69_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00040 NZ_CP029015.1 Protein Homology CDS 5993 8035 . + 0 ID=cds-WP_110480517.1;Parent=gene-DDE69_RS00040;Dbxref=Genbank:WP_110480517.1;Name=WP_110480517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783986.1;locus_tag=DDE69_RS00040;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_110480517.1;transl_table=11 NZ_CP029015.1 RefSeq gene 8045 9124 . + . ID=gene-DDE69_RS00045;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=DDE69_RS00045 NZ_CP029015.1 Protein Homology CDS 8045 9124 . + 0 ID=cds-WP_110480518.1;Parent=gene-DDE69_RS00045;Dbxref=Genbank:WP_110480518.1;Name=WP_110480518.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783987.1;locus_tag=DDE69_RS00045;product=3-dehydroquinate synthase;protein_id=WP_110480518.1;transl_table=11 NZ_CP029015.1 RefSeq gene 10025 11905 . + . ID=gene-DDE69_RS00050;Name=DDE69_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00050 NZ_CP029015.1 Protein Homology CDS 10025 11905 . + 0 ID=cds-WP_204352357.1;Parent=gene-DDE69_RS00050;Dbxref=Genbank:WP_204352357.1;Name=WP_204352357.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783989.1;locus_tag=DDE69_RS00050;product=S1 RNA-binding domain-containing protein;protein_id=WP_204352357.1;transl_table=11 NZ_CP029015.1 RefSeq pseudogene 11909 12493 . + . ID=gene-DDE69_RS00055;Name=DDE69_RS00055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE69_RS00055;pseudo=true NZ_CP029015.1 Protein Homology CDS 11909 12493 . + 0 ID=cds-DDE69_RS00055;Parent=gene-DDE69_RS00055;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013742.2;locus_tag=DDE69_RS00055;product=O-methyltransferase;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq pseudogene 13416 14600 . - . ID=gene-DDE69_RS00065;Name=rho;end_range=14600,.;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=DDE69_RS00065;partial=true;pseudo=true NZ_CP029015.1 Protein Homology CDS 13416 14600 . - 0 ID=cds-DDE69_RS00065;Parent=gene-DDE69_RS00065;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;end_range=14600,.;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013305029.1;locus_tag=DDE69_RS00065;partial=true;product=transcription termination factor Rho;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq gene 14683 15735 . + . ID=gene-DDE69_RS00070;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DDE69_RS00070 NZ_CP029015.1 Protein Homology CDS 14683 15735 . + 0 ID=cds-WP_110480520.1;Parent=gene-DDE69_RS00070;Dbxref=Genbank:WP_110480520.1;Name=WP_110480520.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783993.1;locus_tag=DDE69_RS00070;product=peptide chain release factor 1;protein_id=WP_110480520.1;transl_table=11 NZ_CP029015.1 RefSeq gene 15806 16234 . + . ID=gene-DDE69_RS00075;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=DDE69_RS00075 NZ_CP029015.1 Protein Homology CDS 15806 16234 . + 0 ID=cds-WP_110480700.1;Parent=gene-DDE69_RS00075;Dbxref=Genbank:WP_110480700.1;Name=WP_110480700.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821681.1;locus_tag=DDE69_RS00075;product=type II 3-dehydroquinate dehydratase;protein_id=WP_110480700.1;transl_table=11 NZ_CP029015.1 RefSeq gene 16258 16548 . - . ID=gene-DDE69_RS00080;Name=DDE69_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00080 NZ_CP029015.1 Protein Homology CDS 16258 16548 . - 0 ID=cds-WP_110480521.1;Parent=gene-DDE69_RS00080;Dbxref=Genbank:WP_110480521.1;Name=WP_110480521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783995.1;locus_tag=DDE69_RS00080;product=ATP synthase F1 subunit epsilon;protein_id=WP_110480521.1;transl_table=11 NZ_CP029015.1 RefSeq gene 16562 18142 . - . ID=gene-DDE69_RS00085;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=DDE69_RS00085 NZ_CP029015.1 Protein Homology CDS 16562 18142 . - 0 ID=cds-WP_110480522.1;Parent=gene-DDE69_RS00085;Dbxref=Genbank:WP_110480522.1;Name=WP_110480522.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783996.1;locus_tag=DDE69_RS00085;product=F0F1 ATP synthase subunit beta;protein_id=WP_110480522.1;transl_table=11 NZ_CP029015.1 RefSeq gene 18271 18492 . - . ID=gene-DDE69_RS01380;Name=DDE69_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01380 NZ_CP029015.1 GeneMarkS-2+ CDS 18271 18492 . - 0 ID=cds-WP_162616549.1;Parent=gene-DDE69_RS01380;Dbxref=Genbank:WP_162616549.1;Name=WP_162616549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01380;product=hypothetical protein;protein_id=WP_162616549.1;transl_table=11 NZ_CP029015.1 RefSeq gene 18718 18790 . + . ID=gene-DDE69_RS00095;Name=DDE69_RS00095;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00095 NZ_CP029015.1 tRNAscan-SE tRNA 18718 18790 . + . ID=rna-DDE69_RS00095;Parent=gene-DDE69_RS00095;anticodon=(pos:18751..18753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00095;product=tRNA-Met NZ_CP029015.1 tRNAscan-SE exon 18718 18790 . + . ID=exon-DDE69_RS00095-1;Parent=rna-DDE69_RS00095;anticodon=(pos:18751..18753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00095;product=tRNA-Met NZ_CP029015.1 RefSeq gene 18834 22202 . + . ID=gene-DDE69_RS00100;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DDE69_RS00100 NZ_CP029015.1 Protein Homology CDS 18834 22202 . + 0 ID=cds-WP_204352358.1;Parent=gene-DDE69_RS00100;Dbxref=Genbank:WP_204352358.1;Name=WP_204352358.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821605.1;locus_tag=DDE69_RS00100;product=isoleucine--tRNA ligase;protein_id=WP_204352358.1;transl_table=11 NZ_CP029015.1 RefSeq gene 22556 22630 . - . ID=gene-DDE69_RS00105;Name=DDE69_RS00105;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00105 NZ_CP029015.1 tRNAscan-SE tRNA 22556 22630 . - . ID=rna-DDE69_RS00105;Parent=gene-DDE69_RS00105;anticodon=(pos:complement(22593..22595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00105;product=tRNA-Asn NZ_CP029015.1 tRNAscan-SE exon 22556 22630 . - . ID=exon-DDE69_RS00105-1;Parent=rna-DDE69_RS00105;anticodon=(pos:complement(22593..22595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00105;product=tRNA-Asn NZ_CP029015.1 RefSeq pseudogene 22647 24424 . - . ID=gene-DDE69_RS00110;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=pseudogene;locus_tag=DDE69_RS00110;pseudo=true NZ_CP029015.1 Protein Homology CDS 22647 24424 . - 0 ID=cds-DDE69_RS00110;Parent=gene-DDE69_RS00110;Note=frameshifted%3B internal stop;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315488.1;locus_tag=DDE69_RS00110;product=translation elongation factor 4;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq gene 24426 25517 . - . ID=gene-DDE69_RS00115;Name=DDE69_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00115 NZ_CP029015.1 Protein Homology CDS 24426 25517 . - 0 ID=cds-WP_110480523.1;Parent=gene-DDE69_RS00115;Dbxref=Genbank:WP_110480523.1;Name=WP_110480523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784001.1;locus_tag=DDE69_RS00115;product=DNA polymerase III subunit delta';protein_id=WP_110480523.1;transl_table=11 NZ_CP029015.1 RefSeq gene 25538 26791 . + . ID=gene-DDE69_RS00120;Name=DDE69_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00120 NZ_CP029015.1 Protein Homology CDS 25538 26791 . + 0 ID=cds-WP_110480524.1;Parent=gene-DDE69_RS00120;Dbxref=Genbank:WP_110480524.1;Name=WP_110480524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784002.1;locus_tag=DDE69_RS00120;product=U32 family peptidase;protein_id=WP_110480524.1;transl_table=11 NZ_CP029015.1 RefSeq gene 26791 27015 . + . ID=gene-DDE69_RS00125;Name=DDE69_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00125 NZ_CP029015.1 Protein Homology CDS 26791 27015 . + 0 ID=cds-WP_110480525.1;Parent=gene-DDE69_RS00125;Dbxref=Genbank:WP_110480525.1;Name=WP_110480525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784003.1;locus_tag=DDE69_RS00125;product=ferredoxin;protein_id=WP_110480525.1;transl_table=11 NZ_CP029015.1 RefSeq gene 27022 28653 . - . ID=gene-DDE69_RS00130;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=DDE69_RS00130 NZ_CP029015.1 Protein Homology CDS 27022 28653 . - 0 ID=cds-WP_110480526.1;Parent=gene-DDE69_RS00130;Dbxref=Genbank:WP_110480526.1;Name=WP_110480526.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784004.1;locus_tag=DDE69_RS00130;product=glutamine--tRNA ligase;protein_id=WP_110480526.1;transl_table=11 NZ_CP029015.1 RefSeq gene 28656 30518 . - . ID=gene-DDE69_RS00135;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=DDE69_RS00135 NZ_CP029015.1 Protein Homology CDS 28656 30518 . - 0 ID=cds-WP_110480527.1;Parent=gene-DDE69_RS00135;Dbxref=Genbank:WP_110480527.1;Name=WP_110480527.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784005.1;locus_tag=DDE69_RS00135;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_110480527.1;transl_table=11 NZ_CP029015.1 RefSeq gene 30511 30951 . - . ID=gene-DDE69_RS00140;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=DDE69_RS00140 NZ_CP029015.1 Protein Homology CDS 30511 30951 . - 0 ID=cds-WP_110480528.1;Parent=gene-DDE69_RS00140;Dbxref=Genbank:WP_110480528.1;Name=WP_110480528.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015360462.1;locus_tag=DDE69_RS00140;product=rRNA maturation RNase YbeY;protein_id=WP_110480528.1;transl_table=11 NZ_CP029015.1 RefSeq gene 30968 31633 . + . ID=gene-DDE69_RS00145;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=DDE69_RS00145 NZ_CP029015.1 Protein Homology CDS 30968 31633 . + 0 ID=cds-WP_110480529.1;Parent=gene-DDE69_RS00145;Dbxref=Genbank:WP_110480529.1;Name=WP_110480529.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784007.1;locus_tag=DDE69_RS00145;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_110480529.1;transl_table=11 NZ_CP029015.1 RefSeq gene 31637 31707 . - . ID=gene-DDE69_RS00150;Name=DDE69_RS00150;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00150 NZ_CP029015.1 tRNAscan-SE tRNA 31637 31707 . - . ID=rna-DDE69_RS00150;Parent=gene-DDE69_RS00150;anticodon=(pos:complement(31673..31675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00150;product=tRNA-Cys NZ_CP029015.1 tRNAscan-SE exon 31637 31707 . - . ID=exon-DDE69_RS00150-1;Parent=rna-DDE69_RS00150;anticodon=(pos:complement(31673..31675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00150;product=tRNA-Cys NZ_CP029015.1 RefSeq gene 31745 32650 . + . ID=gene-DDE69_RS00155;Name=DDE69_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00155 NZ_CP029015.1 Protein Homology CDS 31745 32650 . + 0 ID=cds-WP_110480530.1;Parent=gene-DDE69_RS00155;Dbxref=Genbank:WP_110480530.1;Name=WP_110480530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784008.1;locus_tag=DDE69_RS00155;product=ribose-phosphate pyrophosphokinase;protein_id=WP_110480530.1;transl_table=11 NZ_CP029015.1 RefSeq gene 32663 33256 . + . ID=gene-DDE69_RS00160;Name=DDE69_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00160 NZ_CP029015.1 Protein Homology CDS 32663 33256 . + 0 ID=cds-WP_110480531.1;Parent=gene-DDE69_RS00160;Dbxref=Genbank:WP_110480531.1;Name=WP_110480531.1;Ontology_term=GO:0006412,GO:0006950,GO:0003735,GO:0008097,GO:0000315,GO:0022625;gbkey=CDS;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784009.1;locus_tag=DDE69_RS00160;product=50S ribosomal protein L25;protein_id=WP_110480531.1;transl_table=11 NZ_CP029015.1 RefSeq gene 33257 34921 . + . ID=gene-DDE69_RS00165;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DDE69_RS00165 NZ_CP029015.1 Protein Homology CDS 33257 34921 . + 0 ID=cds-WP_110480532.1;Parent=gene-DDE69_RS00165;Dbxref=Genbank:WP_110480532.1;Name=WP_110480532.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784010.1;locus_tag=DDE69_RS00165;product=methionine--tRNA ligase;protein_id=WP_110480532.1;transl_table=11 NZ_CP029015.1 RefSeq gene 35130 36587 . - . ID=gene-DDE69_RS00170;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DDE69_RS00170 NZ_CP029015.1 Protein Homology CDS 35130 36587 . - 0 ID=cds-WP_110480533.1;Parent=gene-DDE69_RS00170;Dbxref=Genbank:WP_110480533.1;Name=WP_110480533.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784012.1;locus_tag=DDE69_RS00170;product=glutamate--tRNA ligase;protein_id=WP_110480533.1;transl_table=11 NZ_CP029015.1 RefSeq gene 36594 37442 . - . ID=gene-DDE69_RS00175;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=DDE69_RS00175 NZ_CP029015.1 Protein Homology CDS 36594 37442 . - 0 ID=cds-WP_110480534.1;Parent=gene-DDE69_RS00175;Dbxref=Genbank:WP_110480534.1;Name=WP_110480534.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784013.1;locus_tag=DDE69_RS00175;product=ATP synthase F1 subunit gamma;protein_id=WP_110480534.1;transl_table=11 NZ_CP029015.1 RefSeq gene 37435 39021 . - . ID=gene-DDE69_RS00180;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=DDE69_RS00180 NZ_CP029015.1 Protein Homology CDS 37435 39021 . - 0 ID=cds-WP_110480535.1;Parent=gene-DDE69_RS00180;Dbxref=Genbank:WP_110480535.1;Name=WP_110480535.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784014.1;locus_tag=DDE69_RS00180;product=F0F1 ATP synthase subunit alpha;protein_id=WP_110480535.1;transl_table=11 NZ_CP029015.1 RefSeq gene 39028 39567 . - . ID=gene-DDE69_RS00185;Name=DDE69_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00185 NZ_CP029015.1 Protein Homology CDS 39028 39567 . - 0 ID=cds-WP_110480536.1;Parent=gene-DDE69_RS00185;Dbxref=Genbank:WP_110480536.1;Name=WP_110480536.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012439.2;locus_tag=DDE69_RS00185;product=F0F1 ATP synthase subunit delta;protein_id=WP_110480536.1;transl_table=11 NZ_CP029015.1 RefSeq gene 39570 40052 . - . ID=gene-DDE69_RS00190;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=DDE69_RS00190 NZ_CP029015.1 Protein Homology CDS 39570 40052 . - 0 ID=cds-WP_110480537.1;Parent=gene-DDE69_RS00190;Dbxref=Genbank:WP_110480537.1;Name=WP_110480537.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784016.1;locus_tag=DDE69_RS00190;product=F0F1 ATP synthase subunit B;protein_id=WP_110480537.1;transl_table=11 NZ_CP029015.1 RefSeq gene 40069 40296 . - . ID=gene-DDE69_RS00195;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DDE69_RS00195 NZ_CP029015.1 Protein Homology CDS 40069 40296 . - 0 ID=cds-WP_110467202.1;Parent=gene-DDE69_RS00195;Dbxref=Genbank:WP_110467202.1;Name=WP_110467202.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821237.1;locus_tag=DDE69_RS00195;product=ATP synthase F0 subunit C;protein_id=WP_110467202.1;transl_table=11 NZ_CP029015.1 RefSeq gene 40422 41459 . - . ID=gene-DDE69_RS00200;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DDE69_RS00200 NZ_CP029015.1 Protein Homology CDS 40422 41459 . - 0 ID=cds-WP_110480538.1;Parent=gene-DDE69_RS00200;Dbxref=Genbank:WP_110480538.1;Name=WP_110480538.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784018.1;locus_tag=DDE69_RS00200;product=F0F1 ATP synthase subunit A;protein_id=WP_110480538.1;transl_table=11 NZ_CP029015.1 RefSeq gene 41716 42948 . - . ID=gene-DDE69_RS00205;Name=DDE69_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00205 NZ_CP029015.1 Protein Homology CDS 41716 42948 . - 0 ID=cds-WP_110480539.1;Parent=gene-DDE69_RS00205;Dbxref=Genbank:WP_110480539.1;Name=WP_110480539.1;Ontology_term=GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784019.1;locus_tag=DDE69_RS00205;product=aspartate kinase;protein_id=WP_110480539.1;transl_table=11 NZ_CP029015.1 RefSeq gene 43039 43641 . - . ID=gene-DDE69_RS00210;Name=DDE69_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00210 NZ_CP029015.1 Protein Homology CDS 43039 43641 . - 0 ID=cds-WP_110480540.1;Parent=gene-DDE69_RS00210;Dbxref=Genbank:WP_110480540.1;Name=WP_110480540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784020.1;locus_tag=DDE69_RS00210;product=MarC family protein;protein_id=WP_110480540.1;transl_table=11 NZ_CP029015.1 RefSeq gene 43704 44378 . - . ID=gene-DDE69_RS00215;Name=DDE69_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00215 NZ_CP029015.1 Protein Homology CDS 43704 44378 . - 0 ID=cds-WP_110480541.1;Parent=gene-DDE69_RS00215;Dbxref=Genbank:WP_110480541.1;Name=WP_110480541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246402.1;locus_tag=DDE69_RS00215;product=RNA methyltransferase;protein_id=WP_110480541.1;transl_table=11 NZ_CP029015.1 RefSeq gene 44500 45552 . - . ID=gene-DDE69_RS00220;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=DDE69_RS00220 NZ_CP029015.1 Protein Homology CDS 44500 45552 . - 0 ID=cds-WP_110480542.1;Parent=gene-DDE69_RS00220;Dbxref=Genbank:WP_110480542.1;Name=WP_110480542.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784021.1;locus_tag=DDE69_RS00220;product=3-isopropylmalate dehydrogenase;protein_id=WP_110480542.1;transl_table=11 NZ_CP029015.1 RefSeq gene 45556 46143 . - . ID=gene-DDE69_RS00225;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=DDE69_RS00225 NZ_CP029015.1 Protein Homology CDS 45556 46143 . - 0 ID=cds-WP_110480543.1;Parent=gene-DDE69_RS00225;Dbxref=Genbank:WP_110480543.1;Name=WP_110480543.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784022.1;locus_tag=DDE69_RS00225;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_110480543.1;transl_table=11 NZ_CP029015.1 RefSeq gene 46150 47559 . - . ID=gene-DDE69_RS00230;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=DDE69_RS00230 NZ_CP029015.1 Protein Homology CDS 46150 47559 . - 0 ID=cds-WP_110480544.1;Parent=gene-DDE69_RS00230;Dbxref=Genbank:WP_110480544.1;Name=WP_110480544.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784023.1;locus_tag=DDE69_RS00230;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_110480544.1;transl_table=11 NZ_CP029015.1 RefSeq gene 47552 48718 . - . ID=gene-DDE69_RS00235;Name=DDE69_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00235 NZ_CP029015.1 Protein Homology CDS 47552 48718 . - 0 ID=cds-WP_110480545.1;Parent=gene-DDE69_RS00235;Dbxref=Genbank:WP_110480545.1;Name=WP_110480545.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784024.1;locus_tag=DDE69_RS00235;product=2-isopropylmalate synthase;protein_id=WP_110480545.1;transl_table=11 NZ_CP029015.1 RefSeq gene 48699 49028 . - . ID=gene-DDE69_RS00240;Name=DDE69_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00240 NZ_CP029015.1 GeneMarkS-2+ CDS 48699 49028 . - 0 ID=cds-WP_162616550.1;Parent=gene-DDE69_RS00240;Dbxref=Genbank:WP_162616550.1;Name=WP_162616550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00240;product=hypothetical protein;protein_id=WP_162616550.1;transl_table=11 NZ_CP029015.1 RefSeq gene 49066 50349 . + . ID=gene-DDE69_RS00245;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=DDE69_RS00245 NZ_CP029015.1 Protein Homology CDS 49066 50349 . + 0 ID=cds-WP_110480702.1;Parent=gene-DDE69_RS00245;Dbxref=Genbank:WP_110480702.1;Name=WP_110480702.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784026.1;locus_tag=DDE69_RS00245;product=tyrosine--tRNA ligase;protein_id=WP_110480702.1;transl_table=11 NZ_CP029015.1 RefSeq gene 50379 53141 . + . ID=gene-DDE69_RS00250;Name=DDE69_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00250 NZ_CP029015.1 Protein Homology CDS 50379 53141 . + 0 ID=cds-WP_110480547.1;Parent=gene-DDE69_RS00250;Dbxref=Genbank:WP_110480547.1;Name=WP_110480547.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784027.1;locus_tag=DDE69_RS00250;product=class I tRNA ligase family protein;protein_id=WP_110480547.1;transl_table=11 NZ_CP029015.1 RefSeq gene 53230 54081 . + . ID=gene-DDE69_RS00255;Name=DDE69_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00255 NZ_CP029015.1 Protein Homology CDS 53230 54081 . + 0 ID=cds-WP_110480548.1;Parent=gene-DDE69_RS00255;Dbxref=Genbank:WP_110480548.1;Name=WP_110480548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726552.1;locus_tag=DDE69_RS00255;product=transketolase;protein_id=WP_110480548.1;transl_table=11 NZ_CP029015.1 RefSeq gene 54088 55062 . + . ID=gene-DDE69_RS00260;Name=DDE69_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00260 NZ_CP029015.1 Protein Homology CDS 54088 55062 . + 0 ID=cds-WP_110480549.1;Parent=gene-DDE69_RS00260;Dbxref=Genbank:WP_110480549.1;Name=WP_110480549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370771.1;locus_tag=DDE69_RS00260;product=transketolase family protein;protein_id=WP_110480549.1;transl_table=11 NZ_CP029015.1 RefSeq gene 55053 55124 . + . ID=gene-DDE69_RS00265;Name=DDE69_RS00265;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00265 NZ_CP029015.1 tRNAscan-SE tRNA 55053 55124 . + . ID=rna-DDE69_RS00265;Parent=gene-DDE69_RS00265;anticodon=(pos:55086..55088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00265;product=tRNA-Phe NZ_CP029015.1 tRNAscan-SE exon 55053 55124 . + . ID=exon-DDE69_RS00265-1;Parent=rna-DDE69_RS00265;anticodon=(pos:55086..55088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00265;product=tRNA-Phe NZ_CP029015.1 RefSeq gene 55161 56441 . + . ID=gene-DDE69_RS00270;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=DDE69_RS00270 NZ_CP029015.1 Protein Homology CDS 55161 56441 . + 0 ID=cds-WP_110480550.1;Parent=gene-DDE69_RS00270;Dbxref=Genbank:WP_110480550.1;Name=WP_110480550.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784030.1;locus_tag=DDE69_RS00270;product=serine--tRNA ligase;protein_id=WP_110480550.1;transl_table=11 NZ_CP029015.1 RefSeq gene 56420 56659 . + . ID=gene-DDE69_RS00275;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DDE69_RS00275 NZ_CP029015.1 Protein Homology CDS 56420 56659 . + 0 ID=cds-WP_110480551.1;Parent=gene-DDE69_RS00275;Dbxref=Genbank:WP_110480551.1;Name=WP_110480551.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013598566.1;locus_tag=DDE69_RS00275;product=50S ribosomal protein L28;protein_id=WP_110480551.1;transl_table=11 NZ_CP029015.1 RefSeq gene 56629 56811 . + . ID=gene-DDE69_RS00280;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DDE69_RS00280 NZ_CP029015.1 Protein Homology CDS 56629 56811 . + 0 ID=cds-WP_012784032.1;Parent=gene-DDE69_RS00280;Dbxref=Genbank:WP_012784032.1;Name=WP_012784032.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011963553.1;locus_tag=DDE69_RS00280;product=50S ribosomal protein L33;protein_id=WP_012784032.1;transl_table=11 NZ_CP029015.1 RefSeq gene 56813 56986 . + . ID=gene-DDE69_RS00285;Name=DDE69_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00285 NZ_CP029015.1 Protein Homology CDS 56813 56986 . + 0 ID=cds-WP_110480552.1;Parent=gene-DDE69_RS00285;Dbxref=Genbank:WP_110480552.1;Name=WP_110480552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315525.1;locus_tag=DDE69_RS00285;product=DUF4295 domain-containing protein;protein_id=WP_110480552.1;transl_table=11 NZ_CP029015.1 RefSeq gene 57000 57073 . - . ID=gene-DDE69_RS00290;Name=DDE69_RS00290;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00290 NZ_CP029015.1 tRNAscan-SE tRNA 57000 57073 . - . ID=rna-DDE69_RS00290;Parent=gene-DDE69_RS00290;anticodon=(pos:complement(57037..57039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00290;product=tRNA-His NZ_CP029015.1 tRNAscan-SE exon 57000 57073 . - . ID=exon-DDE69_RS00290-1;Parent=rna-DDE69_RS00290;anticodon=(pos:complement(57037..57039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00290;product=tRNA-His NZ_CP029015.1 RefSeq gene 57083 58033 . - . ID=gene-DDE69_RS00295;Name=DDE69_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00295 NZ_CP029015.1 Protein Homology CDS 57083 58033 . - 0 ID=cds-WP_110480553.1;Parent=gene-DDE69_RS00295;Dbxref=Genbank:WP_110480553.1;Name=WP_110480553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038506.1;locus_tag=DDE69_RS00295;product=RluA family pseudouridine synthase;protein_id=WP_110480553.1;transl_table=11 NZ_CP029015.1 RefSeq gene 58049 58795 . + . ID=gene-DDE69_RS00300;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=DDE69_RS00300 NZ_CP029015.1 Protein Homology CDS 58049 58795 . + 0 ID=cds-WP_110480554.1;Parent=gene-DDE69_RS00300;Dbxref=Genbank:WP_110480554.1;Name=WP_110480554.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784034.1;locus_tag=DDE69_RS00300;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_110480554.1;transl_table=11 NZ_CP029015.1 RefSeq gene 58792 63099 . - . ID=gene-DDE69_RS00305;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=DDE69_RS00305 NZ_CP029015.1 Protein Homology CDS 58792 63099 . - 0 ID=cds-WP_110480555.1;Parent=gene-DDE69_RS00305;Dbxref=Genbank:WP_110480555.1;Name=WP_110480555.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784035.1;locus_tag=DDE69_RS00305;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_110480555.1;transl_table=11 NZ_CP029015.1 RefSeq gene 63125 67021 . - . ID=gene-DDE69_RS00310;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DDE69_RS00310 NZ_CP029015.1 Protein Homology CDS 63125 67021 . - 0 ID=cds-WP_239493744.1;Parent=gene-DDE69_RS00310;Dbxref=Genbank:WP_239493744.1;Name=WP_239493744.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784036.1;locus_tag=DDE69_RS00310;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_239493744.1;transl_table=11 NZ_CP029015.1 RefSeq gene 67026 67394 . - . ID=gene-DDE69_RS00315;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DDE69_RS00315 NZ_CP029015.1 Protein Homology CDS 67026 67394 . - 0 ID=cds-WP_110480704.1;Parent=gene-DDE69_RS00315;Dbxref=Genbank:WP_110480704.1;Name=WP_110480704.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315529.1;locus_tag=DDE69_RS00315;product=50S ribosomal protein L7/L12;protein_id=WP_110480704.1;transl_table=11 NZ_CP029015.1 RefSeq gene 67414 67929 . - . ID=gene-DDE69_RS00320;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DDE69_RS00320 NZ_CP029015.1 Protein Homology CDS 67414 67929 . - 0 ID=cds-WP_110480556.1;Parent=gene-DDE69_RS00320;Dbxref=Genbank:WP_110480556.1;Name=WP_110480556.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784038.1;locus_tag=DDE69_RS00320;product=50S ribosomal protein L10;protein_id=WP_110480556.1;transl_table=11 NZ_CP029015.1 RefSeq gene 67941 68612 . - . ID=gene-DDE69_RS00325;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=DDE69_RS00325 NZ_CP029015.1 Protein Homology CDS 67941 68612 . - 0 ID=cds-WP_110480557.1;Parent=gene-DDE69_RS00325;Dbxref=Genbank:WP_110480557.1;Name=WP_110480557.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784039.1;locus_tag=DDE69_RS00325;product=50S ribosomal protein L1;protein_id=WP_110480557.1;transl_table=11 NZ_CP029015.1 RefSeq gene 68632 69054 . - . ID=gene-DDE69_RS00330;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=DDE69_RS00330 NZ_CP029015.1 Protein Homology CDS 68632 69054 . - 0 ID=cds-WP_110480558.1;Parent=gene-DDE69_RS00330;Dbxref=Genbank:WP_110480558.1;Name=WP_110480558.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315532.1;locus_tag=DDE69_RS00330;product=50S ribosomal protein L11;protein_id=WP_110480558.1;transl_table=11 NZ_CP029015.1 RefSeq gene 69073 69315 . - . ID=gene-DDE69_RS00335;Name=DDE69_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00335 NZ_CP029015.1 GeneMarkS-2+ CDS 69073 69315 . - 0 ID=cds-WP_110480559.1;Parent=gene-DDE69_RS00335;Dbxref=Genbank:WP_110480559.1;Name=WP_110480559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00335;product=hypothetical protein;protein_id=WP_110480559.1;transl_table=11 NZ_CP029015.1 RefSeq gene 69326 69399 . - . ID=gene-DDE69_RS00340;Name=DDE69_RS00340;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00340 NZ_CP029015.1 tRNAscan-SE tRNA 69326 69399 . - . ID=rna-DDE69_RS00340;Parent=gene-DDE69_RS00340;anticodon=(pos:complement(69363..69365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00340;product=tRNA-Trp NZ_CP029015.1 tRNAscan-SE exon 69326 69399 . - . ID=exon-DDE69_RS00340-1;Parent=rna-DDE69_RS00340;anticodon=(pos:complement(69363..69365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00340;product=tRNA-Trp NZ_CP029015.1 RefSeq gene 69402 70589 . - . ID=gene-DDE69_RS00345;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DDE69_RS00345 NZ_CP029015.1 Protein Homology CDS 69402 70589 . - 0 ID=cds-WP_110480560.1;Parent=gene-DDE69_RS00345;Dbxref=Genbank:WP_110480560.1;Name=WP_110480560.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743802.1;locus_tag=DDE69_RS00345;product=elongation factor Tu;protein_id=WP_110480560.1;transl_table=11 NZ_CP029015.1 RefSeq gene 70607 70679 . - . ID=gene-DDE69_RS00350;Name=DDE69_RS00350;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00350 NZ_CP029015.1 tRNAscan-SE tRNA 70607 70679 . - . ID=rna-DDE69_RS00350;Parent=gene-DDE69_RS00350;anticodon=(pos:complement(70644..70646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00350;product=tRNA-Thr NZ_CP029015.1 tRNAscan-SE exon 70607 70679 . - . ID=exon-DDE69_RS00350-1;Parent=rna-DDE69_RS00350;anticodon=(pos:complement(70644..70646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00350;product=tRNA-Thr NZ_CP029015.1 RefSeq gene 70700 70775 . - . ID=gene-DDE69_RS00355;Name=DDE69_RS00355;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00355 NZ_CP029015.1 tRNAscan-SE tRNA 70700 70775 . - . ID=rna-DDE69_RS00355;Parent=gene-DDE69_RS00355;anticodon=(pos:complement(70740..70742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00355;product=tRNA-Gly NZ_CP029015.1 tRNAscan-SE exon 70700 70775 . - . ID=exon-DDE69_RS00355-1;Parent=rna-DDE69_RS00355;anticodon=(pos:complement(70740..70742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00355;product=tRNA-Gly NZ_CP029015.1 RefSeq gene 70782 70864 . - . ID=gene-DDE69_RS00360;Name=DDE69_RS00360;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00360 NZ_CP029015.1 tRNAscan-SE tRNA 70782 70864 . - . ID=rna-DDE69_RS00360;Parent=gene-DDE69_RS00360;anticodon=(pos:complement(70828..70830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00360;product=tRNA-Tyr NZ_CP029015.1 tRNAscan-SE exon 70782 70864 . - . ID=exon-DDE69_RS00360-1;Parent=rna-DDE69_RS00360;anticodon=(pos:complement(70828..70830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00360;product=tRNA-Tyr NZ_CP029015.1 RefSeq gene 70902 70975 . - . ID=gene-DDE69_RS00365;Name=DDE69_RS00365;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00365 NZ_CP029015.1 tRNAscan-SE tRNA 70902 70975 . - . ID=rna-DDE69_RS00365;Parent=gene-DDE69_RS00365;anticodon=(pos:complement(70939..70941));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00365;product=tRNA-Thr NZ_CP029015.1 tRNAscan-SE exon 70902 70975 . - . ID=exon-DDE69_RS00365-1;Parent=rna-DDE69_RS00365;anticodon=(pos:complement(70939..70941));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00365;product=tRNA-Thr NZ_CP029015.1 RefSeq pseudogene 71734 71966 . + . ID=gene-DDE69_RS01385;Name=DDE69_RS01385;end_range=71966,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE69_RS01385;partial=true;pseudo=true;start_range=.,71734 NZ_CP029015.1 Protein Homology CDS 71734 71966 . + 0 ID=cds-DDE69_RS01385;Parent=gene-DDE69_RS01385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=71966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784043.1;locus_tag=DDE69_RS01385;partial=true;product=hypothetical protein;pseudo=true;start_range=.,71734;transl_table=11 NZ_CP029015.1 RefSeq gene 72227 72637 . - . ID=gene-DDE69_RS00375;Name=DDE69_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00375 NZ_CP029015.1 Protein Homology CDS 72227 72637 . - 0 ID=cds-WP_110480561.1;Parent=gene-DDE69_RS00375;Dbxref=Genbank:WP_110480561.1;Name=WP_110480561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784048.1;locus_tag=DDE69_RS00375;product=SufE family protein;protein_id=WP_110480561.1;transl_table=11 NZ_CP029015.1 RefSeq gene 73060 74607 . + . ID=gene-DDE69_RS00380;Name=DDE69_RS00380;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE69_RS00380 NZ_CP029015.1 cmsearch rRNA 73060 74607 . + . ID=rna-DDE69_RS00380;Parent=gene-DDE69_RS00380;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00380;product=16S ribosomal RNA NZ_CP029015.1 cmsearch exon 73060 74607 . + . ID=exon-DDE69_RS00380-1;Parent=rna-DDE69_RS00380;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00380;product=16S ribosomal RNA NZ_CP029015.1 RefSeq gene 74720 74793 . + . ID=gene-DDE69_RS00385;Name=DDE69_RS00385;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00385 NZ_CP029015.1 tRNAscan-SE tRNA 74720 74793 . + . ID=rna-DDE69_RS00385;Parent=gene-DDE69_RS00385;anticodon=(pos:74754..74756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00385;product=tRNA-Ile NZ_CP029015.1 tRNAscan-SE exon 74720 74793 . + . ID=exon-DDE69_RS00385-1;Parent=rna-DDE69_RS00385;anticodon=(pos:74754..74756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00385;product=tRNA-Ile NZ_CP029015.1 RefSeq gene 74809 74882 . + . ID=gene-DDE69_RS00390;Name=DDE69_RS00390;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00390 NZ_CP029015.1 tRNAscan-SE tRNA 74809 74882 . + . ID=rna-DDE69_RS00390;Parent=gene-DDE69_RS00390;anticodon=(pos:74843..74845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00390;product=tRNA-Ala NZ_CP029015.1 tRNAscan-SE exon 74809 74882 . + . ID=exon-DDE69_RS00390-1;Parent=rna-DDE69_RS00390;anticodon=(pos:74843..74845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00390;product=tRNA-Ala NZ_CP029015.1 RefSeq gene 74970 77872 . + . ID=gene-DDE69_RS00395;Name=DDE69_RS00395;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE69_RS00395 NZ_CP029015.1 cmsearch rRNA 74970 77872 . + . ID=rna-DDE69_RS00395;Parent=gene-DDE69_RS00395;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00395;product=23S ribosomal RNA NZ_CP029015.1 cmsearch exon 74970 77872 . + . ID=exon-DDE69_RS00395-1;Parent=rna-DDE69_RS00395;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00395;product=23S ribosomal RNA NZ_CP029015.1 RefSeq gene 77927 78036 . + . ID=gene-DDE69_RS00400;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=DDE69_RS00400 NZ_CP029015.1 cmsearch rRNA 77927 78036 . + . ID=rna-DDE69_RS00400;Parent=gene-DDE69_RS00400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00400;product=5S ribosomal RNA NZ_CP029015.1 cmsearch exon 77927 78036 . + . ID=exon-DDE69_RS00400-1;Parent=rna-DDE69_RS00400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00400;product=5S ribosomal RNA NZ_CP029015.1 RefSeq gene 78253 79296 . + . ID=gene-DDE69_RS00405;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=DDE69_RS00405 NZ_CP029015.1 Protein Homology CDS 78253 79296 . + 0 ID=cds-WP_110480562.1;Parent=gene-DDE69_RS00405;Dbxref=Genbank:WP_110480562.1;Name=WP_110480562.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784051.1;locus_tag=DDE69_RS00405;product=DNA polymerase III subunit gamma/tau;protein_id=WP_110480562.1;transl_table=11 NZ_CP029015.1 RefSeq gene 79453 79605 . + . ID=gene-DDE69_RS01390;Name=DDE69_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01390 NZ_CP029015.1 GeneMarkS-2+ CDS 79453 79605 . + 0 ID=cds-WP_239493745.1;Parent=gene-DDE69_RS01390;Dbxref=Genbank:WP_239493745.1;Name=WP_239493745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01390;product=hypothetical protein;protein_id=WP_239493745.1;transl_table=11 NZ_CP029015.1 RefSeq pseudogene 79656 80175 . + . ID=gene-DDE69_RS00410;Name=DDE69_RS00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE69_RS00410;pseudo=true NZ_CP029015.1 Protein Homology CDS 79656 80175 . + 0 ID=cds-DDE69_RS00410;Parent=gene-DDE69_RS00410;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019344.2;locus_tag=DDE69_RS00410;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq gene 80177 82711 . + . ID=gene-DDE69_RS00415;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=DDE69_RS00415 NZ_CP029015.1 Protein Homology CDS 80177 82711 . + 0 ID=cds-WP_110480705.1;Parent=gene-DDE69_RS00415;Dbxref=Genbank:WP_110480705.1;Name=WP_110480705.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784053.1;locus_tag=DDE69_RS00415;product=DNA mismatch repair protein MutS;protein_id=WP_110480705.1;transl_table=11 NZ_CP029015.1 RefSeq gene 82715 82787 . + . ID=gene-DDE69_RS00420;Name=DDE69_RS00420;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00420 NZ_CP029015.1 tRNAscan-SE tRNA 82715 82787 . + . ID=rna-DDE69_RS00420;Parent=gene-DDE69_RS00420;anticodon=(pos:82748..82750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00420;product=tRNA-Gly NZ_CP029015.1 tRNAscan-SE exon 82715 82787 . + . ID=exon-DDE69_RS00420-1;Parent=rna-DDE69_RS00420;anticodon=(pos:82748..82750);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00420;product=tRNA-Gly NZ_CP029015.1 RefSeq gene 82793 82879 . + . ID=gene-DDE69_RS00425;Name=DDE69_RS00425;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00425 NZ_CP029015.1 tRNAscan-SE tRNA 82793 82879 . + . ID=rna-DDE69_RS00425;Parent=gene-DDE69_RS00425;anticodon=(pos:82827..82829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00425;product=tRNA-Leu NZ_CP029015.1 tRNAscan-SE exon 82793 82879 . + . ID=exon-DDE69_RS00425-1;Parent=rna-DDE69_RS00425;anticodon=(pos:82827..82829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00425;product=tRNA-Leu NZ_CP029015.1 RefSeq gene 82880 83686 . - . ID=gene-DDE69_RS00430;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DDE69_RS00430 NZ_CP029015.1 Protein Homology CDS 82880 83686 . - 0 ID=cds-WP_110480563.1;Parent=gene-DDE69_RS00430;Dbxref=Genbank:WP_110480563.1;Name=WP_110480563.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315548.1;locus_tag=DDE69_RS00430;product=translation elongation factor Ts;protein_id=WP_110480563.1;transl_table=11 NZ_CP029015.1 RefSeq gene 83659 84405 . - . ID=gene-DDE69_RS00435;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=DDE69_RS00435 NZ_CP029015.1 Protein Homology CDS 83659 84405 . - 0 ID=cds-WP_110480706.1;Parent=gene-DDE69_RS00435;Dbxref=Genbank:WP_110480706.1;Name=WP_110480706.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784055.1;locus_tag=DDE69_RS00435;product=30S ribosomal protein S2;protein_id=WP_110480706.1;transl_table=11 NZ_CP029015.1 RefSeq gene 84410 84799 . - . ID=gene-DDE69_RS00440;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=DDE69_RS00440 NZ_CP029015.1 Protein Homology CDS 84410 84799 . - 0 ID=cds-WP_110480564.1;Parent=gene-DDE69_RS00440;Dbxref=Genbank:WP_110480564.1;Name=WP_110480564.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315550.1;locus_tag=DDE69_RS00440;product=30S ribosomal protein S9;protein_id=WP_110480564.1;transl_table=11 NZ_CP029015.1 RefSeq gene 84802 85257 . - . ID=gene-DDE69_RS00445;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=DDE69_RS00445 NZ_CP029015.1 Protein Homology CDS 84802 85257 . - 0 ID=cds-WP_110480565.1;Parent=gene-DDE69_RS00445;Dbxref=Genbank:WP_110480565.1;Name=WP_110480565.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784057.1;locus_tag=DDE69_RS00445;product=50S ribosomal protein L13;protein_id=WP_110480565.1;transl_table=11 NZ_CP029015.1 RefSeq gene 85380 87272 . + . ID=gene-DDE69_RS00450;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DDE69_RS00450 NZ_CP029015.1 Protein Homology CDS 85380 87272 . + 0 ID=cds-WP_110480566.1;Parent=gene-DDE69_RS00450;Dbxref=Genbank:WP_110480566.1;Name=WP_110480566.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246159.1;locus_tag=DDE69_RS00450;product=molecular chaperone DnaK;protein_id=WP_110480566.1;transl_table=11 NZ_CP029015.1 RefSeq gene 87282 87803 . + . ID=gene-DDE69_RS00455;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=DDE69_RS00455 NZ_CP029015.1 Protein Homology CDS 87282 87803 . + 0 ID=cds-WP_110480567.1;Parent=gene-DDE69_RS00455;Dbxref=Genbank:WP_110480567.1;Name=WP_110480567.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784059.1;locus_tag=DDE69_RS00455;product=translation initiation factor IF-3;protein_id=WP_110480567.1;transl_table=11 NZ_CP029015.1 RefSeq gene 87809 88003 . + . ID=gene-DDE69_RS00460;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=DDE69_RS00460 NZ_CP029015.1 Protein Homology CDS 87809 88003 . + 0 ID=cds-WP_110480568.1;Parent=gene-DDE69_RS00460;Dbxref=Genbank:WP_110480568.1;Name=WP_110480568.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784060.1;locus_tag=DDE69_RS00460;product=50S ribosomal protein L35;protein_id=WP_110480568.1;transl_table=11 NZ_CP029015.1 RefSeq gene 87996 88340 . + . ID=gene-DDE69_RS00465;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DDE69_RS00465 NZ_CP029015.1 Protein Homology CDS 87996 88340 . + 0 ID=cds-WP_110480569.1;Parent=gene-DDE69_RS00465;Dbxref=Genbank:WP_110480569.1;Name=WP_110480569.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784061.1;locus_tag=DDE69_RS00465;product=50S ribosomal protein L20;protein_id=WP_110480569.1;transl_table=11 NZ_CP029015.1 RefSeq gene 88312 88836 . - . ID=gene-DDE69_RS00470;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=DDE69_RS00470 NZ_CP029015.1 Protein Homology CDS 88312 88836 . - 0 ID=cds-WP_110480570.1;Parent=gene-DDE69_RS00470;Dbxref=Genbank:WP_110480570.1;Name=WP_110480570.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784062.1;locus_tag=DDE69_RS00470;product=peptide deformylase;protein_id=WP_110480570.1;transl_table=11 NZ_CP029015.1 RefSeq gene 88842 89258 . - . ID=gene-DDE69_RS00475;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=DDE69_RS00475 NZ_CP029015.1 Protein Homology CDS 88842 89258 . - 0 ID=cds-WP_110480571.1;Parent=gene-DDE69_RS00475;Dbxref=Genbank:WP_110480571.1;Name=WP_110480571.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784063.1;locus_tag=DDE69_RS00475;product=Holliday junction resolvase RuvX;protein_id=WP_110480571.1;transl_table=11 NZ_CP029015.1 RefSeq gene 89306 90145 . + . ID=gene-DDE69_RS00480;Name=DDE69_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00480 NZ_CP029015.1 Protein Homology CDS 89306 90145 . + 0 ID=cds-WP_110480572.1;Parent=gene-DDE69_RS00480;Dbxref=Genbank:WP_110480572.1;Name=WP_110480572.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784064.1;locus_tag=DDE69_RS00480;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_110480572.1;transl_table=11 NZ_CP029015.1 RefSeq gene 90155 91207 . + . ID=gene-DDE69_RS00485;Name=DDE69_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00485 NZ_CP029015.1 Protein Homology CDS 90155 91207 . + 0 ID=cds-WP_110480573.1;Parent=gene-DDE69_RS00485;Dbxref=Genbank:WP_110480573.1;Name=WP_110480573.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784065.1;locus_tag=DDE69_RS00485;product=branched-chain amino acid aminotransferase;protein_id=WP_110480573.1;transl_table=11 NZ_CP029015.1 RefSeq gene 91233 92114 . - . ID=gene-DDE69_RS00490;Name=DDE69_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00490 NZ_CP029015.1 Protein Homology CDS 91233 92114 . - 0 ID=cds-WP_110480574.1;Parent=gene-DDE69_RS00490;Dbxref=Genbank:WP_110480574.1;Name=WP_110480574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DDE69_RS00490;product=HD domain-containing protein;protein_id=WP_110480574.1;transl_table=11 NZ_CP029015.1 RefSeq gene 92139 93233 . - . ID=gene-DDE69_RS00495;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DDE69_RS00495 NZ_CP029015.1 Protein Homology CDS 92139 93233 . - 0 ID=cds-WP_110480575.1;Parent=gene-DDE69_RS00495;Dbxref=Genbank:WP_110480575.1;Name=WP_110480575.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315562.1;locus_tag=DDE69_RS00495;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_110480575.1;transl_table=11 NZ_CP029015.1 RefSeq gene 93230 94315 . - . ID=gene-DDE69_RS00500;Name=DDE69_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00500 NZ_CP029015.1 Protein Homology CDS 93230 94315 . - 0 ID=cds-WP_110480576.1;Parent=gene-DDE69_RS00500;Dbxref=Genbank:WP_110480576.1;Name=WP_110480576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784068.1;locus_tag=DDE69_RS00500;product=DnaJ domain-containing protein;protein_id=WP_110480576.1;transl_table=11 NZ_CP029015.1 RefSeq gene 94701 94856 . + . ID=gene-DDE69_RS01395;Name=DDE69_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01395 NZ_CP029015.1 GeneMarkS-2+ CDS 94701 94856 . + 0 ID=cds-WP_239493746.1;Parent=gene-DDE69_RS01395;Dbxref=Genbank:WP_239493746.1;Name=WP_239493746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01395;product=hypothetical protein;protein_id=WP_239493746.1;transl_table=11 NZ_CP029015.1 RefSeq gene 94947 95681 . + . ID=gene-DDE69_RS01400;Name=DDE69_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01400 NZ_CP029015.1 Protein Homology CDS 94947 95681 . + 0 ID=cds-WP_239493747.1;Parent=gene-DDE69_RS01400;Dbxref=Genbank:WP_239493747.1;Name=WP_239493747.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DDE69_RS01400;product=HDIG domain-containing protein;protein_id=WP_239493747.1;transl_table=11 NZ_CP029015.1 RefSeq gene 95738 97141 . + . ID=gene-DDE69_RS00510;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DDE69_RS00510 NZ_CP029015.1 Protein Homology CDS 95738 97141 . + 0 ID=cds-WP_110480707.1;Parent=gene-DDE69_RS00510;Dbxref=Genbank:WP_110480707.1;Name=WP_110480707.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220989.1;locus_tag=DDE69_RS00510;product=dihydrolipoyl dehydrogenase;protein_id=WP_110480707.1;transl_table=11 NZ_CP029015.1 RefSeq gene 97152 98498 . + . ID=gene-DDE69_RS00515;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=DDE69_RS00515 NZ_CP029015.1 Protein Homology CDS 97152 98498 . + 0 ID=cds-WP_110480577.1;Parent=gene-DDE69_RS00515;Dbxref=Genbank:WP_110480577.1;Name=WP_110480577.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=dnaB;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784071.1;locus_tag=DDE69_RS00515;product=replicative DNA helicase;protein_id=WP_110480577.1;transl_table=11 NZ_CP029015.1 RefSeq gene 98504 99478 . + . ID=gene-DDE69_RS00520;Name=DDE69_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00520 NZ_CP029015.1 Protein Homology CDS 98504 99478 . + 0 ID=cds-WP_110480578.1;Parent=gene-DDE69_RS00520;Dbxref=Genbank:WP_110480578.1;Name=WP_110480578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784072.1;locus_tag=DDE69_RS00520;product=M42 family peptidase;protein_id=WP_110480578.1;transl_table=11 NZ_CP029015.1 RefSeq gene 99499 99909 . - . ID=gene-DDE69_RS00525;Name=DDE69_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00525 NZ_CP029015.1 Protein Homology CDS 99499 99909 . - 0 ID=cds-WP_110480708.1;Parent=gene-DDE69_RS00525;Dbxref=Genbank:WP_110480708.1;Name=WP_110480708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014130.2;locus_tag=DDE69_RS00525;product=ribosome-binding factor A;protein_id=WP_110480708.1;transl_table=11 NZ_CP029015.1 RefSeq gene 100678 100941 . + . ID=gene-DDE69_RS01405;Name=DDE69_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01405 NZ_CP029015.1 Protein Homology CDS 100678 100941 . + 0 ID=cds-WP_239493750.1;Parent=gene-DDE69_RS01405;Dbxref=Genbank:WP_239493750.1;Name=WP_239493750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013067.2;locus_tag=DDE69_RS01405;product=hypothetical protein;protein_id=WP_239493750.1;transl_table=11 NZ_CP029015.1 RefSeq gene 101141 101293 . + . ID=gene-DDE69_RS01410;Name=DDE69_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01410 NZ_CP029015.1 Protein Homology CDS 101141 101293 . + 0 ID=cds-WP_239493748.1;Parent=gene-DDE69_RS01410;Dbxref=Genbank:WP_239493748.1;Name=WP_239493748.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013067.2;locus_tag=DDE69_RS01410;product=hypothetical protein;protein_id=WP_239493748.1;transl_table=11 NZ_CP029015.1 RefSeq gene 101321 102712 . + . ID=gene-DDE69_RS00540;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=DDE69_RS00540 NZ_CP029015.1 Protein Homology CDS 101321 102712 . + 0 ID=cds-WP_110480579.1;Parent=gene-DDE69_RS00540;Dbxref=Genbank:WP_110480579.1;Name=WP_110480579.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220986.1;locus_tag=DDE69_RS00540;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_110480579.1;transl_table=11 NZ_CP029015.1 RefSeq gene 102728 102802 . + . ID=gene-DDE69_RS00545;Name=DDE69_RS00545;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00545 NZ_CP029015.1 tRNAscan-SE tRNA 102728 102802 . + . ID=rna-DDE69_RS00545;Parent=gene-DDE69_RS00545;anticodon=(pos:102763..102765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00545;product=tRNA-Val NZ_CP029015.1 tRNAscan-SE exon 102728 102802 . + . ID=exon-DDE69_RS00545-1;Parent=rna-DDE69_RS00545;anticodon=(pos:102763..102765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00545;product=tRNA-Val NZ_CP029015.1 RefSeq gene 102837 107084 . + . ID=gene-DDE69_RS00550;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DDE69_RS00550 NZ_CP029015.1 Protein Homology CDS 102837 107084 . + 0 ID=cds-WP_110480580.1;Parent=gene-DDE69_RS00550;Dbxref=Genbank:WP_110480580.1;Name=WP_110480580.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784077.1;locus_tag=DDE69_RS00550;product=DNA polymerase III subunit alpha;protein_id=WP_110480580.1;transl_table=11 NZ_CP029015.1 RefSeq gene 107106 108845 . + . ID=gene-DDE69_RS00555;Name=DDE69_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00555 NZ_CP029015.1 Protein Homology CDS 107106 108845 . + 0 ID=cds-WP_110480581.1;Parent=gene-DDE69_RS00555;Dbxref=Genbank:WP_110480581.1;Name=WP_110480581.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038540.1;locus_tag=DDE69_RS00555;product=argininosuccinate synthase;protein_id=WP_110480581.1;transl_table=11 NZ_CP029015.1 RefSeq gene 108838 109824 . + . ID=gene-DDE69_RS00560;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=DDE69_RS00560 NZ_CP029015.1 Protein Homology CDS 108838 109824 . + 0 ID=cds-WP_110480582.1;Parent=gene-DDE69_RS00560;Dbxref=Genbank:WP_110480582.1;Name=WP_110480582.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220983.1;locus_tag=DDE69_RS00560;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_110480582.1;transl_table=11 NZ_CP029015.1 RefSeq gene 109839 110984 . + . ID=gene-DDE69_RS00565;Name=DDE69_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00565 NZ_CP029015.1 Protein Homology CDS 109839 110984 . + 0 ID=cds-WP_110480583.1;Parent=gene-DDE69_RS00565;Dbxref=Genbank:WP_110480583.1;Name=WP_110480583.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315576.1;locus_tag=DDE69_RS00565;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110480583.1;transl_table=11 NZ_CP029015.1 RefSeq gene 110974 112047 . + . ID=gene-DDE69_RS00570;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=DDE69_RS00570 NZ_CP029015.1 Protein Homology CDS 110974 112047 . + 0 ID=cds-WP_110480584.1;Parent=gene-DDE69_RS00570;Dbxref=Genbank:WP_110480584.1;Name=WP_110480584.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038543.1;locus_tag=DDE69_RS00570;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_110480584.1;transl_table=11 NZ_CP029015.1 RefSeq gene 112044 115235 . + . ID=gene-DDE69_RS00575;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DDE69_RS00575 NZ_CP029015.1 Protein Homology CDS 112044 115235 . + 0 ID=cds-WP_110480585.1;Parent=gene-DDE69_RS00575;Dbxref=Genbank:WP_110480585.1;Name=WP_110480585.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840845.1;locus_tag=DDE69_RS00575;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=WP_110480585.1;transl_table=11 NZ_CP029015.1 RefSeq gene 115243 116187 . + . ID=gene-DDE69_RS00580;Name=DDE69_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00580 NZ_CP029015.1 Protein Homology CDS 115243 116187 . + 0 ID=cds-WP_110480586.1;Parent=gene-DDE69_RS00580;Dbxref=Genbank:WP_110480586.1;Name=WP_110480586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784083.1;locus_tag=DDE69_RS00580;product=acetylornithine carbamoyltransferase;protein_id=WP_110480586.1;transl_table=11 NZ_CP029015.1 RefSeq gene 116184 116960 . + . ID=gene-DDE69_RS00585;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=DDE69_RS00585 NZ_CP029015.1 Protein Homology CDS 116184 116960 . + 0 ID=cds-WP_110480587.1;Parent=gene-DDE69_RS00585;Dbxref=Genbank:WP_110480587.1;Name=WP_110480587.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784084.1;locus_tag=DDE69_RS00585;product=acetylglutamate kinase;protein_id=WP_110480587.1;transl_table=11 NZ_CP029015.1 RefSeq gene 116948 118027 . + . ID=gene-DDE69_RS00590;Name=DDE69_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00590 NZ_CP029015.1 Protein Homology CDS 116948 118027 . + 0 ID=cds-WP_110480588.1;Parent=gene-DDE69_RS00590;Dbxref=Genbank:WP_110480588.1;Name=WP_110480588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784085.1;locus_tag=DDE69_RS00590;product=M20 family metallo-hydrolase;protein_id=WP_110480588.1;transl_table=11 NZ_CP029015.1 RefSeq gene 118018 118091 . + . ID=gene-DDE69_RS00595;Name=DDE69_RS00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00595 NZ_CP029015.1 tRNAscan-SE tRNA 118018 118091 . + . ID=rna-DDE69_RS00595;Parent=gene-DDE69_RS00595;anticodon=(pos:118052..118054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00595;product=tRNA-Asp NZ_CP029015.1 tRNAscan-SE exon 118018 118091 . + . ID=exon-DDE69_RS00595-1;Parent=rna-DDE69_RS00595;anticodon=(pos:118052..118054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00595;product=tRNA-Asp NZ_CP029015.1 RefSeq gene 118136 118208 . - . ID=gene-DDE69_RS00600;Name=DDE69_RS00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00600 NZ_CP029015.1 tRNAscan-SE tRNA 118136 118208 . - . ID=rna-DDE69_RS00600;Parent=gene-DDE69_RS00600;anticodon=(pos:complement(118173..118175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00600;product=tRNA-Lys NZ_CP029015.1 tRNAscan-SE exon 118136 118208 . - . ID=exon-DDE69_RS00600-1;Parent=rna-DDE69_RS00600;anticodon=(pos:complement(118173..118175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00600;product=tRNA-Lys NZ_CP029015.1 RefSeq gene 118257 118772 . + . ID=gene-DDE69_RS00605;Name=DDE69_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00605 NZ_CP029015.1 Protein Homology CDS 118257 118772 . + 0 ID=cds-WP_110480589.1;Parent=gene-DDE69_RS00605;Dbxref=Genbank:WP_110480589.1;Name=WP_110480589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784086.1;locus_tag=DDE69_RS00605;product=shikimate kinase;protein_id=WP_110480589.1;transl_table=11 NZ_CP029015.1 RefSeq gene 118762 120084 . + . ID=gene-DDE69_RS00610;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DDE69_RS00610 NZ_CP029015.1 Protein Homology CDS 118762 120084 . + 0 ID=cds-WP_110480590.1;Parent=gene-DDE69_RS00610;Dbxref=Genbank:WP_110480590.1;Name=WP_110480590.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784087.1;locus_tag=DDE69_RS00610;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_110480590.1;transl_table=11 NZ_CP029015.1 RefSeq gene 120061 120819 . - . ID=gene-DDE69_RS00615;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=DDE69_RS00615 NZ_CP029015.1 Protein Homology CDS 120061 120819 . - 0 ID=cds-WP_110480591.1;Parent=gene-DDE69_RS00615;Dbxref=Genbank:WP_110480591.1;Name=WP_110480591.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220978.1;locus_tag=DDE69_RS00615;product=tryptophan synthase subunit alpha;protein_id=WP_110480591.1;transl_table=11 NZ_CP029015.1 RefSeq gene 120816 122603 . - . ID=gene-DDE69_RS00620;Name=DDE69_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00620 NZ_CP029015.1 Protein Homology CDS 120816 122603 . - 0 ID=cds-WP_110480592.1;Parent=gene-DDE69_RS00620;Dbxref=Genbank:WP_110480592.1;Name=WP_110480592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784089.1;locus_tag=DDE69_RS00620;product=bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta;protein_id=WP_110480592.1;transl_table=11 NZ_CP029015.1 RefSeq gene 122563 123372 . - . ID=gene-DDE69_RS00625;Name=DDE69_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00625 NZ_CP029015.1 Protein Homology CDS 122563 123372 . - 0 ID=cds-WP_110480593.1;Parent=gene-DDE69_RS00625;Dbxref=Genbank:WP_110480593.1;Name=WP_110480593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784090.1;locus_tag=DDE69_RS00625;product=indole-3-glycerol-phosphate synthase;protein_id=WP_110480593.1;transl_table=11 NZ_CP029015.1 RefSeq gene 123383 124369 . - . ID=gene-DDE69_RS00630;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=DDE69_RS00630 NZ_CP029015.1 Protein Homology CDS 123383 124369 . - 0 ID=cds-WP_110480709.1;Parent=gene-DDE69_RS00630;Dbxref=Genbank:WP_110480709.1;Name=WP_110480709.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784091.1;locus_tag=DDE69_RS00630;product=anthranilate phosphoribosyltransferase;protein_id=WP_110480709.1;transl_table=11 NZ_CP029015.1 RefSeq gene 124366 124938 . - . ID=gene-DDE69_RS00635;Name=DDE69_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00635 NZ_CP029015.1 Protein Homology CDS 124366 124938 . - 0 ID=cds-WP_110480594.1;Parent=gene-DDE69_RS00635;Dbxref=Genbank:WP_110480594.1;Name=WP_110480594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784092.1;locus_tag=DDE69_RS00635;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_110480594.1;transl_table=11 NZ_CP029015.1 RefSeq gene 124935 126350 . - . ID=gene-DDE69_RS00640;Name=DDE69_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00640 NZ_CP029015.1 Protein Homology CDS 124935 126350 . - 0 ID=cds-WP_110480595.1;Parent=gene-DDE69_RS00640;Dbxref=Genbank:WP_110480595.1;Name=WP_110480595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784093.1;locus_tag=DDE69_RS00640;product=anthranilate synthase component I family protein;protein_id=WP_110480595.1;transl_table=11 NZ_CP029015.1 RefSeq gene 126358 127842 . - . ID=gene-DDE69_RS00645;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=DDE69_RS00645 NZ_CP029015.1 Protein Homology CDS 126358 127842 . - 0 ID=cds-WP_239493739.1;Parent=gene-DDE69_RS00645;Dbxref=Genbank:WP_239493739.1;Name=WP_239493739.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784094.1;locus_tag=DDE69_RS00645;product=proline--tRNA ligase;protein_id=WP_239493739.1;transl_table=11 NZ_CP029015.1 RefSeq gene 127886 130288 . + . ID=gene-DDE69_RS00650;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DDE69_RS00650 NZ_CP029015.1 Protein Homology CDS 127886 130288 . + 0 ID=cds-WP_110480711.1;Parent=gene-DDE69_RS00650;Dbxref=Genbank:WP_110480711.1;Name=WP_110480711.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799416.1;locus_tag=DDE69_RS00650;product=endopeptidase La;protein_id=WP_110480711.1;transl_table=11 NZ_CP029015.1 RefSeq gene 130308 131516 . + . ID=gene-DDE69_RS00655;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=DDE69_RS00655 NZ_CP029015.1 Protein Homology CDS 130308 131516 . + 0 ID=cds-WP_110480596.1;Parent=gene-DDE69_RS00655;Dbxref=Genbank:WP_110480596.1;Name=WP_110480596.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799417.1;locus_tag=DDE69_RS00655;product=diaminopimelate decarboxylase;protein_id=WP_110480596.1;transl_table=11 NZ_CP029015.1 RefSeq gene 131522 131607 . + . ID=gene-DDE69_RS00660;Name=DDE69_RS00660;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00660 NZ_CP029015.1 tRNAscan-SE tRNA 131522 131607 . + . ID=rna-DDE69_RS00660;Parent=gene-DDE69_RS00660;anticodon=(pos:131556..131558);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00660;product=tRNA-Ser NZ_CP029015.1 tRNAscan-SE exon 131522 131607 . + . ID=exon-DDE69_RS00660-1;Parent=rna-DDE69_RS00660;anticodon=(pos:131556..131558);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00660;product=tRNA-Ser NZ_CP029015.1 RefSeq gene 131658 132743 . + . ID=gene-DDE69_RS00665;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=DDE69_RS00665 NZ_CP029015.1 Protein Homology CDS 131658 132743 . + 0 ID=cds-WP_110480712.1;Parent=gene-DDE69_RS00665;Dbxref=Genbank:WP_110480712.1;Name=WP_110480712.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799418.1;locus_tag=DDE69_RS00665;product=chorismate synthase;protein_id=WP_110480712.1;transl_table=11 NZ_CP029015.1 RefSeq gene 132793 134649 . + . ID=gene-DDE69_RS00670;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=DDE69_RS00670 NZ_CP029015.1 Protein Homology CDS 132793 134649 . + 0 ID=cds-WP_110480597.1;Parent=gene-DDE69_RS00670;Dbxref=Genbank:WP_110480597.1;Name=WP_110480597.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799419.1;locus_tag=DDE69_RS00670;product=molecular chaperone HtpG;protein_id=WP_110480597.1;transl_table=11 NZ_CP029015.1 RefSeq gene 134646 135950 . - . ID=gene-DDE69_RS00675;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=DDE69_RS00675 NZ_CP029015.1 Protein Homology CDS 134646 135950 . - 0 ID=cds-WP_110480598.1;Parent=gene-DDE69_RS00675;Dbxref=Genbank:WP_110480598.1;Name=WP_110480598.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799420.1;locus_tag=DDE69_RS00675;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_110480598.1;transl_table=11 NZ_CP029015.1 RefSeq gene 135963 139082 . - . ID=gene-DDE69_RS00680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=DDE69_RS00680 NZ_CP029015.1 Protein Homology CDS 135963 139082 . - 0 ID=cds-WP_110480599.1;Parent=gene-DDE69_RS00680;Dbxref=Genbank:WP_110480599.1;Name=WP_110480599.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799421.1;locus_tag=DDE69_RS00680;product=preprotein translocase subunit SecA;protein_id=WP_110480599.1;transl_table=11 NZ_CP029015.1 RefSeq gene 139161 139529 . + . ID=gene-DDE69_RS00685;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=DDE69_RS00685 NZ_CP029015.1 Protein Homology CDS 139161 139529 . + 0 ID=cds-WP_110480600.1;Parent=gene-DDE69_RS00685;Dbxref=Genbank:WP_110480600.1;Name=WP_110480600.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799422.1;locus_tag=DDE69_RS00685;product=50S ribosomal protein L19;protein_id=WP_110480600.1;transl_table=11 NZ_CP029015.1 RefSeq gene 139498 139860 . + . ID=gene-DDE69_RS00690;Name=DDE69_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00690 NZ_CP029015.1 Protein Homology CDS 139498 139860 . + 0 ID=cds-WP_110480601.1;Parent=gene-DDE69_RS00690;Dbxref=Genbank:WP_110480601.1;Name=WP_110480601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799423.1;locus_tag=DDE69_RS00690;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_110480601.1;transl_table=11 NZ_CP029015.1 RefSeq gene 139890 141395 . + . ID=gene-DDE69_RS00695;Name=DDE69_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00695 NZ_CP029015.1 Protein Homology CDS 139890 141395 . + 0 ID=cds-WP_110480602.1;Parent=gene-DDE69_RS00695;Dbxref=Genbank:WP_110480602.1;Name=WP_110480602.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014937545.1;locus_tag=DDE69_RS00695;product=glycine--tRNA ligase;protein_id=WP_110480602.1;transl_table=11 NZ_CP029015.1 RefSeq gene 141592 142902 . - . ID=gene-DDE69_RS00705;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=DDE69_RS00705 NZ_CP029015.1 Protein Homology CDS 141592 142902 . - 0 ID=cds-WP_110480603.1;Parent=gene-DDE69_RS00705;Dbxref=Genbank:WP_110480603.1;Name=WP_110480603.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220961.1;locus_tag=DDE69_RS00705;product=threonine synthase;protein_id=WP_110480603.1;transl_table=11 NZ_CP029015.1 RefSeq gene 142929 143855 . - . ID=gene-DDE69_RS00710;Name=DDE69_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00710 NZ_CP029015.1 Protein Homology CDS 142929 143855 . - 0 ID=cds-WP_110480604.1;Parent=gene-DDE69_RS00710;Dbxref=Genbank:WP_110480604.1;Name=WP_110480604.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799427.1;locus_tag=DDE69_RS00710;product=homoserine kinase;protein_id=WP_110480604.1;transl_table=11 NZ_CP029015.1 RefSeq gene 143857 146310 . - . ID=gene-DDE69_RS00715;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=DDE69_RS00715 NZ_CP029015.1 Protein Homology CDS 143857 146310 . - 0 ID=cds-WP_110480605.1;Parent=gene-DDE69_RS00715;Dbxref=Genbank:WP_110480605.1;Name=WP_110480605.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315598.1;locus_tag=DDE69_RS00715;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_110480605.1;transl_table=11 NZ_CP029015.1 RefSeq gene 146342 146414 . - . ID=gene-DDE69_RS00720;Name=DDE69_RS00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00720 NZ_CP029015.1 tRNAscan-SE tRNA 146342 146414 . - . ID=rna-DDE69_RS00720;Parent=gene-DDE69_RS00720;anticodon=(pos:complement(146379..146381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00720;product=tRNA-Arg NZ_CP029015.1 tRNAscan-SE exon 146342 146414 . - . ID=exon-DDE69_RS00720-1;Parent=rna-DDE69_RS00720;anticodon=(pos:complement(146379..146381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00720;product=tRNA-Arg NZ_CP029015.1 RefSeq gene 146422 146496 . - . ID=gene-DDE69_RS00725;Name=DDE69_RS00725;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00725 NZ_CP029015.1 tRNAscan-SE tRNA 146422 146496 . - . ID=rna-DDE69_RS00725;Parent=gene-DDE69_RS00725;anticodon=(pos:complement(146459..146461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00725;product=tRNA-Pro NZ_CP029015.1 tRNAscan-SE exon 146422 146496 . - . ID=exon-DDE69_RS00725-1;Parent=rna-DDE69_RS00725;anticodon=(pos:complement(146459..146461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00725;product=tRNA-Pro NZ_CP029015.1 RefSeq gene 146500 146581 . - . ID=gene-DDE69_RS00730;Name=DDE69_RS00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00730 NZ_CP029015.1 tRNAscan-SE tRNA 146500 146581 . - . ID=rna-DDE69_RS00730;Parent=gene-DDE69_RS00730;anticodon=(pos:complement(146546..146548));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00730;product=tRNA-Ser NZ_CP029015.1 tRNAscan-SE exon 146500 146581 . - . ID=exon-DDE69_RS00730-1;Parent=rna-DDE69_RS00730;anticodon=(pos:complement(146546..146548));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00730;product=tRNA-Ser NZ_CP029015.1 RefSeq pseudogene 147578 147958 . - . ID=gene-DDE69_RS01415;Name=DDE69_RS01415;end_range=147958,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE69_RS01415;partial=true;pseudo=true;start_range=.,147578 NZ_CP029015.1 Protein Homology CDS 147578 147958 . - 0 ID=cds-DDE69_RS01415;Parent=gene-DDE69_RS01415;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009055,GO:0020037;end_range=147958,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799431.1;locus_tag=DDE69_RS01415;partial=true;product=c-type cytochrome;pseudo=true;start_range=.,147578;transl_table=11 NZ_CP029015.1 RefSeq gene 148023 149333 . - . ID=gene-DDE69_RS00755;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=DDE69_RS00755 NZ_CP029015.1 Protein Homology CDS 148023 149333 . - 0 ID=cds-WP_110480608.1;Parent=gene-DDE69_RS00755;Dbxref=Genbank:WP_110480608.1;Name=WP_110480608.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220952.1;locus_tag=DDE69_RS00755;product=ribosome biogenesis GTPase Der;protein_id=WP_110480608.1;transl_table=11 NZ_CP029015.1 RefSeq gene 149334 150185 . - . ID=gene-DDE69_RS00760;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=DDE69_RS00760 NZ_CP029015.1 Protein Homology CDS 149334 150185 . - 0 ID=cds-WP_110480609.1;Parent=gene-DDE69_RS00760;Dbxref=Genbank:WP_110480609.1;Name=WP_110480609.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315604.1;locus_tag=DDE69_RS00760;product=lipoyl synthase;protein_id=WP_110480609.1;transl_table=11 NZ_CP029015.1 RefSeq gene 150166 150339 . - . ID=gene-DDE69_RS00765;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DDE69_RS00765 NZ_CP029015.1 Protein Homology CDS 150166 150339 . - 0 ID=cds-WP_110480610.1;Parent=gene-DDE69_RS00765;Dbxref=Genbank:WP_110480610.1;Name=WP_110480610.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799436.1;locus_tag=DDE69_RS00765;product=50S ribosomal protein L34;protein_id=WP_110480610.1;transl_table=11 NZ_CP029015.1 RefSeq gene 150399 150554 . + . ID=gene-DDE69_RS01420;Name=DDE69_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01420 NZ_CP029015.1 GeneMarkS-2+ CDS 150399 150554 . + 0 ID=cds-WP_239493740.1;Parent=gene-DDE69_RS01420;Dbxref=Genbank:WP_239493740.1;Name=WP_239493740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01420;product=hypothetical protein;protein_id=WP_239493740.1;transl_table=11 NZ_CP029015.1 RefSeq gene 150606 150782 . + . ID=gene-DDE69_RS01425;Name=DDE69_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01425 NZ_CP029015.1 GeneMarkS-2+ CDS 150606 150782 . + 0 ID=cds-WP_239493741.1;Parent=gene-DDE69_RS01425;Dbxref=Genbank:WP_239493741.1;Name=WP_239493741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01425;product=hypothetical protein;protein_id=WP_239493741.1;transl_table=11 NZ_CP029015.1 RefSeq gene 150892 150976 . - . ID=gene-DDE69_RS00775;Name=DDE69_RS00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00775 NZ_CP029015.1 tRNAscan-SE tRNA 150892 150976 . - . ID=rna-DDE69_RS00775;Parent=gene-DDE69_RS00775;anticodon=(pos:complement(150940..150942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00775;product=tRNA-Leu NZ_CP029015.1 tRNAscan-SE exon 150892 150976 . - . ID=exon-DDE69_RS00775-1;Parent=rna-DDE69_RS00775;anticodon=(pos:complement(150940..150942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00775;product=tRNA-Leu NZ_CP029015.1 RefSeq gene 150983 151066 . - . ID=gene-DDE69_RS00780;Name=DDE69_RS00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00780 NZ_CP029015.1 tRNAscan-SE tRNA 150983 151066 . - . ID=rna-DDE69_RS00780;Parent=gene-DDE69_RS00780;anticodon=(pos:complement(151030..151032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00780;product=tRNA-Leu NZ_CP029015.1 tRNAscan-SE exon 150983 151066 . - . ID=exon-DDE69_RS00780-1;Parent=rna-DDE69_RS00780;anticodon=(pos:complement(151030..151032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00780;product=tRNA-Leu NZ_CP029015.1 RefSeq gene 151215 152189 . - . ID=gene-DDE69_RS00785;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=DDE69_RS00785 NZ_CP029015.1 Protein Homology CDS 151215 152189 . - 0 ID=cds-WP_110480611.1;Parent=gene-DDE69_RS00785;Dbxref=Genbank:WP_110480611.1;Name=WP_110480611.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799439.1;locus_tag=DDE69_RS00785;product=tryptophan--tRNA ligase;protein_id=WP_110480611.1;transl_table=11 NZ_CP029015.1 RefSeq gene 152582 154834 . - . ID=gene-DDE69_RS00790;Name=DDE69_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00790 NZ_CP029015.1 Protein Homology CDS 152582 154834 . - 0 ID=cds-WP_162616551.1;Parent=gene-DDE69_RS00790;Dbxref=Genbank:WP_162616551.1;Name=WP_162616551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018899.2;locus_tag=DDE69_RS00790;product=hypothetical protein;protein_id=WP_162616551.1;transl_table=11 NZ_CP029015.1 RefSeq gene 154912 155460 . + . ID=gene-DDE69_RS00795;Name=DDE69_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00795 NZ_CP029015.1 Protein Homology CDS 154912 155460 . + 0 ID=cds-WP_110480613.1;Parent=gene-DDE69_RS00795;Dbxref=Genbank:WP_110480613.1;Name=WP_110480613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013891.2;locus_tag=DDE69_RS00795;product=ribosome-recycling factor;protein_id=WP_110480613.1;transl_table=11 NZ_CP029015.1 RefSeq gene 155469 156875 . + . ID=gene-DDE69_RS00800;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=DDE69_RS00800 NZ_CP029015.1 Protein Homology CDS 155469 156875 . + 0 ID=cds-WP_110480614.1;Parent=gene-DDE69_RS00800;Dbxref=Genbank:WP_110480614.1;Name=WP_110480614.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799442.1;locus_tag=DDE69_RS00800;product=asparagine--tRNA ligase;protein_id=WP_110480614.1;transl_table=11 NZ_CP029015.1 RefSeq gene 156887 156973 . + . ID=gene-DDE69_RS00805;Name=DDE69_RS00805;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00805 NZ_CP029015.1 tRNAscan-SE tRNA 156887 156973 . + . ID=rna-DDE69_RS00805;Parent=gene-DDE69_RS00805;anticodon=(pos:156921..156923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00805;product=tRNA-Ser NZ_CP029015.1 tRNAscan-SE exon 156887 156973 . + . ID=exon-DDE69_RS00805-1;Parent=rna-DDE69_RS00805;anticodon=(pos:156921..156923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00805;product=tRNA-Ser NZ_CP029015.1 RefSeq gene 156980 157053 . + . ID=gene-DDE69_RS00810;Name=DDE69_RS00810;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00810 NZ_CP029015.1 tRNAscan-SE tRNA 156980 157053 . + . ID=rna-DDE69_RS00810;Parent=gene-DDE69_RS00810;anticodon=(pos:157014..157016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00810;product=tRNA-Ile NZ_CP029015.1 tRNAscan-SE exon 156980 157053 . + . ID=exon-DDE69_RS00810-1;Parent=rna-DDE69_RS00810;anticodon=(pos:157014..157016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00810;product=tRNA-Ile NZ_CP029015.1 RefSeq gene 157074 157394 . + . ID=gene-DDE69_RS00815;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DDE69_RS00815 NZ_CP029015.1 Protein Homology CDS 157074 157394 . + 0 ID=cds-WP_110480615.1;Parent=gene-DDE69_RS00815;Dbxref=Genbank:WP_110480615.1;Name=WP_110480615.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF013025.2;locus_tag=DDE69_RS00815;product=50S ribosomal protein L21;protein_id=WP_110480615.1;transl_table=11 NZ_CP029015.1 RefSeq gene 157397 157651 . + . ID=gene-DDE69_RS00820;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DDE69_RS00820 NZ_CP029015.1 Protein Homology CDS 157397 157651 . + 0 ID=cds-WP_015799444.1;Parent=gene-DDE69_RS00820;Dbxref=Genbank:WP_015799444.1;Name=WP_015799444.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743953.1;locus_tag=DDE69_RS00820;product=50S ribosomal protein L27;protein_id=WP_015799444.1;transl_table=11 NZ_CP029015.1 RefSeq gene 157662 157994 . + . ID=gene-DDE69_RS00825;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=DDE69_RS00825 NZ_CP029015.1 cmsearch tmRNA 157662 157994 . + . ID=rna-DDE69_RS00825;Parent=gene-DDE69_RS00825;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00825;product=transfer-messenger RNA NZ_CP029015.1 cmsearch exon 157662 157994 . + . ID=exon-DDE69_RS00825-1;Parent=rna-DDE69_RS00825;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS00825;product=transfer-messenger RNA NZ_CP029015.1 RefSeq gene 158010 158381 . + . ID=gene-DDE69_RS00830;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DDE69_RS00830 NZ_CP029015.1 Protein Homology CDS 158010 158381 . + 0 ID=cds-WP_110480616.1;Parent=gene-DDE69_RS00830;Dbxref=Genbank:WP_110480616.1;Name=WP_110480616.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799445.1;locus_tag=DDE69_RS00830;product=30S ribosomal protein S6;protein_id=WP_110480616.1;transl_table=11 NZ_CP029015.1 RefSeq gene 158568 158819 . + . ID=gene-DDE69_RS01430;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DDE69_RS01430 NZ_CP029015.1 Protein Homology CDS 158568 158819 . + 0 ID=cds-WP_239493548.1;Parent=gene-DDE69_RS01430;Dbxref=Genbank:WP_239493548.1;Name=WP_239493548.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009414867.1;locus_tag=DDE69_RS01430;product=30S ribosomal protein S18;protein_id=WP_239493548.1;transl_table=11 NZ_CP029015.1 RefSeq gene 158831 159283 . + . ID=gene-DDE69_RS00840;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DDE69_RS00840 NZ_CP029015.1 Protein Homology CDS 158831 159283 . + 0 ID=cds-WP_110480618.1;Parent=gene-DDE69_RS00840;Dbxref=Genbank:WP_110480618.1;Name=WP_110480618.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00158.1;locus_tag=DDE69_RS00840;product=50S ribosomal protein L9;protein_id=WP_110480618.1;transl_table=11 NZ_CP029015.1 RefSeq gene 159294 159911 . - . ID=gene-DDE69_RS00845;Name=DDE69_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00845 NZ_CP029015.1 GeneMarkS-2+ CDS 159294 159911 . - 0 ID=cds-WP_110480619.1;Parent=gene-DDE69_RS00845;Dbxref=Genbank:WP_110480619.1;Name=WP_110480619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00845;product=hypothetical protein;protein_id=WP_110480619.1;transl_table=11 NZ_CP029015.1 RefSeq gene 159892 161580 . - . ID=gene-DDE69_RS00850;Name=DDE69_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00850 NZ_CP029015.1 Protein Homology CDS 159892 161580 . - 0 ID=cds-WP_110480620.1;Parent=gene-DDE69_RS00850;Dbxref=Genbank:WP_110480620.1;Name=WP_110480620.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024915.2;locus_tag=DDE69_RS00850;product=tetratricopeptide repeat protein;protein_id=WP_110480620.1;transl_table=11 NZ_CP029015.1 RefSeq gene 161585 162469 . - . ID=gene-DDE69_RS00855;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=DDE69_RS00855 NZ_CP029015.1 Protein Homology CDS 161585 162469 . - 0 ID=cds-WP_110480713.1;Parent=gene-DDE69_RS00855;Dbxref=Genbank:WP_110480713.1;Name=WP_110480713.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799450.1;locus_tag=DDE69_RS00855;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_110480713.1;transl_table=11 NZ_CP029015.1 RefSeq gene 162576 163664 . + . ID=gene-DDE69_RS00860;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=DDE69_RS00860 NZ_CP029015.1 Protein Homology CDS 162576 163664 . + 0 ID=cds-WP_110480621.1;Parent=gene-DDE69_RS00860;Dbxref=Genbank:WP_110480621.1;Name=WP_110480621.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110483047.1;locus_tag=DDE69_RS00860;product=peptide chain release factor 2;protein_id=WP_110480621.1;transl_table=11 NZ_CP029015.1 RefSeq gene 163709 164422 . + . ID=gene-DDE69_RS00865;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=DDE69_RS00865 NZ_CP029015.1 Protein Homology CDS 163709 164422 . + 0 ID=cds-WP_110480622.1;Parent=gene-DDE69_RS00865;Dbxref=Genbank:WP_110480622.1;Name=WP_110480622.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315624.1;locus_tag=DDE69_RS00865;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_110480622.1;transl_table=11 NZ_CP029015.1 RefSeq gene 164424 165665 . + . ID=gene-DDE69_RS00870;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DDE69_RS00870 NZ_CP029015.1 Protein Homology CDS 164424 165665 . + 0 ID=cds-WP_110480623.1;Parent=gene-DDE69_RS00870;Dbxref=Genbank:WP_110480623.1;Name=WP_110480623.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799453.1;locus_tag=DDE69_RS00870;product=signal peptidase I;protein_id=WP_110480623.1;transl_table=11 NZ_CP029015.1 RefSeq gene 165724 165936 . + . ID=gene-DDE69_RS00875;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=DDE69_RS00875 NZ_CP029015.1 Protein Homology CDS 165724 165936 . + 0 ID=cds-WP_110480714.1;Parent=gene-DDE69_RS00875;Dbxref=Genbank:WP_110480714.1;Name=WP_110480714.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821626.1;locus_tag=DDE69_RS00875;product=30S ribosomal protein S21;protein_id=WP_110480714.1;transl_table=11 NZ_CP029015.1 RefSeq gene 165938 166690 . + . ID=gene-DDE69_RS00880;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=DDE69_RS00880 NZ_CP029015.1 Protein Homology CDS 165938 166690 . + 0 ID=cds-WP_110480624.1;Parent=gene-DDE69_RS00880;Dbxref=Genbank:WP_110480624.1;Name=WP_110480624.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799455.1;locus_tag=DDE69_RS00880;product=shikimate dehydrogenase;protein_id=WP_110480624.1;transl_table=11 NZ_CP029015.1 RefSeq gene 166695 167663 . - . ID=gene-DDE69_RS00885;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=DDE69_RS00885 NZ_CP029015.1 Protein Homology CDS 166695 167663 . - 0 ID=cds-WP_110480625.1;Parent=gene-DDE69_RS00885;Dbxref=Genbank:WP_110480625.1;Name=WP_110480625.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840753.1;locus_tag=DDE69_RS00885;product=GTPase ObgE;protein_id=WP_110480625.1;transl_table=11 NZ_CP029015.1 RefSeq gene 167667 168632 . - . ID=gene-DDE69_RS00890;Name=DDE69_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00890 NZ_CP029015.1 Protein Homology CDS 167667 168632 . - 0 ID=cds-WP_110480626.1;Parent=gene-DDE69_RS00890;Dbxref=Genbank:WP_110480626.1;Name=WP_110480626.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743889.1;locus_tag=DDE69_RS00890;product=FAD-dependent oxidoreductase;protein_id=WP_110480626.1;transl_table=11 NZ_CP029015.1 RefSeq gene 168659 168743 . - . ID=gene-DDE69_RS00895;Name=DDE69_RS00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00895 NZ_CP029015.1 tRNAscan-SE tRNA 168659 168743 . - . ID=rna-DDE69_RS00895;Parent=gene-DDE69_RS00895;anticodon=(pos:complement(168707..168709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00895;product=tRNA-Leu NZ_CP029015.1 tRNAscan-SE exon 168659 168743 . - . ID=exon-DDE69_RS00895-1;Parent=rna-DDE69_RS00895;anticodon=(pos:complement(168707..168709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00895;product=tRNA-Leu NZ_CP029015.1 RefSeq gene 168752 169129 . - . ID=gene-DDE69_RS00900;Name=DDE69_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00900 NZ_CP029015.1 Protein Homology CDS 168752 169129 . - 0 ID=cds-WP_110480627.1;Parent=gene-DDE69_RS00900;Dbxref=Genbank:WP_110480627.1;Name=WP_110480627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799458.1;locus_tag=DDE69_RS00900;product=START-like domain-containing protein;protein_id=WP_110480627.1;transl_table=11 NZ_CP029015.1 RefSeq gene 169211 169284 . + . ID=gene-DDE69_RS00905;Name=DDE69_RS00905;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS00905 NZ_CP029015.1 tRNAscan-SE tRNA 169211 169284 . + . ID=rna-DDE69_RS00905;Parent=gene-DDE69_RS00905;anticodon=(pos:169245..169247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00905;product=tRNA-Met NZ_CP029015.1 tRNAscan-SE exon 169211 169284 . + . ID=exon-DDE69_RS00905-1;Parent=rna-DDE69_RS00905;anticodon=(pos:169245..169247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS00905;product=tRNA-Met NZ_CP029015.1 RefSeq gene 169318 170661 . + . ID=gene-DDE69_RS00910;Name=DDE69_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00910 NZ_CP029015.1 Protein Homology CDS 169318 170661 . + 0 ID=cds-WP_110480628.1;Parent=gene-DDE69_RS00910;Dbxref=Genbank:WP_110480628.1;Name=WP_110480628.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: protein motif:HMM:NF013570.2;locus_tag=DDE69_RS00910;product=alanine--tRNA ligase-related protein;protein_id=WP_110480628.1;transl_table=11 NZ_CP029015.1 RefSeq gene 170654 173350 . + . ID=gene-DDE69_RS00915;Name=DDE69_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00915 NZ_CP029015.1 Protein Homology CDS 170654 173350 . + 0 ID=cds-WP_110480629.1;Parent=gene-DDE69_RS00915;Dbxref=Genbank:WP_110480629.1;Name=WP_110480629.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799460.1;locus_tag=DDE69_RS00915;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_110480629.1;transl_table=11 NZ_CP029015.1 RefSeq gene 173392 174516 . + . ID=gene-DDE69_RS00920;Name=DDE69_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00920 NZ_CP029015.1 Protein Homology CDS 173392 174516 . + 0 ID=cds-WP_110480630.1;Parent=gene-DDE69_RS00920;Dbxref=Genbank:WP_110480630.1;Name=WP_110480630.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799461.1;locus_tag=DDE69_RS00920;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110480630.1;transl_table=11 NZ_CP029015.1 RefSeq gene 174890 175336 . - . ID=gene-DDE69_RS00930;Name=DDE69_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00930 NZ_CP029015.1 Protein Homology CDS 174890 175336 . - 0 ID=cds-WP_110480631.1;Parent=gene-DDE69_RS00930;Dbxref=Genbank:WP_110480631.1;Name=WP_110480631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799463.1;locus_tag=DDE69_RS00930;product=SsrA-binding protein;protein_id=WP_110480631.1;transl_table=11 NZ_CP029015.1 RefSeq gene 175350 176963 . + . ID=gene-DDE69_RS00935;Name=DDE69_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00935 NZ_CP029015.1 Protein Homology CDS 175350 176963 . + 0 ID=cds-WP_110480632.1;Parent=gene-DDE69_RS00935;Dbxref=Genbank:WP_110480632.1;Name=WP_110480632.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799464.1;locus_tag=DDE69_RS00935;product=ATP-binding cassette domain-containing protein;protein_id=WP_110480632.1;transl_table=11 NZ_CP029015.1 RefSeq gene 176950 177252 . + . ID=gene-DDE69_RS00940;Name=DDE69_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00940 NZ_CP029015.1 Protein Homology CDS 176950 177252 . + 0 ID=cds-WP_110480633.1;Parent=gene-DDE69_RS00940;Dbxref=Genbank:WP_110480633.1;Name=WP_110480633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799465.1;locus_tag=DDE69_RS00940;product=iron-sulfur cluster assembly protein;protein_id=WP_110480633.1;transl_table=11 NZ_CP029015.1 RefSeq gene 177318 177653 . + . ID=gene-DDE69_RS00945;Name=DDE69_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00945 NZ_CP029015.1 Protein Homology CDS 177318 177653 . + 0 ID=cds-WP_110480634.1;Parent=gene-DDE69_RS00945;Dbxref=Genbank:WP_110480634.1;Name=WP_110480634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799466.1;locus_tag=DDE69_RS00945;product=DUF3127 domain-containing protein;protein_id=WP_110480634.1;transl_table=11 NZ_CP029015.1 RefSeq gene 177721 179355 . - . ID=gene-DDE69_RS00950;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DDE69_RS00950 NZ_CP029015.1 Protein Homology CDS 177721 179355 . - 0 ID=cds-WP_110480635.1;Parent=gene-DDE69_RS00950;Dbxref=Genbank:WP_110480635.1;Name=WP_110480635.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743854.1;locus_tag=DDE69_RS00950;product=chaperonin GroEL;protein_id=WP_110480635.1;transl_table=11 NZ_CP029015.1 RefSeq gene 179384 179668 . - . ID=gene-DDE69_RS00955;Name=DDE69_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00955 NZ_CP029015.1 Protein Homology CDS 179384 179668 . - 0 ID=cds-WP_110480636.1;Parent=gene-DDE69_RS00955;Dbxref=Genbank:WP_110480636.1;Name=WP_110480636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799468.1;locus_tag=DDE69_RS00955;product=co-chaperone GroES;protein_id=WP_110480636.1;transl_table=11 NZ_CP029015.1 RefSeq gene 179891 181255 . - . ID=gene-DDE69_RS00960;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=DDE69_RS00960 NZ_CP029015.1 Protein Homology CDS 179891 181255 . - 0 ID=cds-WP_110480637.1;Parent=gene-DDE69_RS00960;Dbxref=Genbank:WP_110480637.1;Name=WP_110480637.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799469.1;locus_tag=DDE69_RS00960;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_110480637.1;transl_table=11 NZ_CP029015.1 RefSeq gene 181299 182711 . + . ID=gene-DDE69_RS00965;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=DDE69_RS00965 NZ_CP029015.1 Protein Homology CDS 181299 182711 . + 0 ID=cds-WP_110480638.1;Parent=gene-DDE69_RS00965;Dbxref=Genbank:WP_110480638.1;Name=WP_110480638.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799470.1;locus_tag=DDE69_RS00965;product=Fe-S cluster assembly protein SufB;protein_id=WP_110480638.1;transl_table=11 NZ_CP029015.1 RefSeq gene 182728 183486 . + . ID=gene-DDE69_RS00970;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=DDE69_RS00970 NZ_CP029015.1 Protein Homology CDS 182728 183486 . + 0 ID=cds-WP_110480639.1;Parent=gene-DDE69_RS00970;Dbxref=Genbank:WP_110480639.1;Name=WP_110480639.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799471.1;locus_tag=DDE69_RS00970;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_110480639.1;transl_table=11 NZ_CP029015.1 RefSeq gene 183473 184765 . + . ID=gene-DDE69_RS00975;Name=DDE69_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00975 NZ_CP029015.1 Protein Homology CDS 183473 184765 . + 0 ID=cds-WP_110480715.1;Parent=gene-DDE69_RS00975;Dbxref=Genbank:WP_110480715.1;Name=WP_110480715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799472.1;locus_tag=DDE69_RS00975;product=SufD family Fe-S cluster assembly protein;protein_id=WP_110480715.1;transl_table=11 NZ_CP029015.1 RefSeq gene 184755 185969 . + . ID=gene-DDE69_RS00980;Name=DDE69_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00980 NZ_CP029015.1 Protein Homology CDS 184755 185969 . + 0 ID=cds-WP_110480640.1;Parent=gene-DDE69_RS00980;Dbxref=Genbank:WP_110480640.1;Name=WP_110480640.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799473.1;locus_tag=DDE69_RS00980;product=SufS family cysteine desulfurase;protein_id=WP_110480640.1;transl_table=11 NZ_CP029015.1 RefSeq gene 186265 186507 . + . ID=gene-DDE69_RS00985;Name=DDE69_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS00985 NZ_CP029015.1 GeneMarkS-2+ CDS 186265 186507 . + 0 ID=cds-WP_110480641.1;Parent=gene-DDE69_RS00985;Dbxref=Genbank:WP_110480641.1;Name=WP_110480641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS00985;product=hypothetical protein;protein_id=WP_110480641.1;transl_table=11 NZ_CP029015.1 RefSeq gene 186932 188536 . + . ID=gene-DDE69_RS00995;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DDE69_RS00995 NZ_CP029015.1 Protein Homology CDS 186932 188536 . + 0 ID=cds-WP_110480642.1;Parent=gene-DDE69_RS00995;Dbxref=Genbank:WP_110480642.1;Name=WP_110480642.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799475.1;locus_tag=DDE69_RS00995;product=translation initiation factor IF-2;protein_id=WP_110480642.1;transl_table=11 NZ_CP029015.1 RefSeq gene 188555 189655 . - . ID=gene-DDE69_RS01000;Name=DDE69_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01000 NZ_CP029015.1 Protein Homology CDS 188555 189655 . - 0 ID=cds-WP_110480643.1;Parent=gene-DDE69_RS01000;Dbxref=Genbank:WP_110480643.1;Name=WP_110480643.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799476.1;locus_tag=DDE69_RS01000;product=chorismate mutase;protein_id=WP_110480643.1;transl_table=11 NZ_CP029015.1 RefSeq gene 189699 190751 . - . ID=gene-DDE69_RS01005;Name=DDE69_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01005 NZ_CP029015.1 Protein Homology CDS 189699 190751 . - 0 ID=cds-WP_110480644.1;Parent=gene-DDE69_RS01005;Dbxref=Genbank:WP_110480644.1;Name=WP_110480644.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799477.1;locus_tag=DDE69_RS01005;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110480644.1;transl_table=11 NZ_CP029015.1 RefSeq gene 190748 191575 . - . ID=gene-DDE69_RS01010;Name=DDE69_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01010 NZ_CP029015.1 Protein Homology CDS 190748 191575 . - 0 ID=cds-WP_110480717.1;Parent=gene-DDE69_RS01010;Dbxref=Genbank:WP_110480717.1;Name=WP_110480717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799478.1;locus_tag=DDE69_RS01010;product=prephenate dehydratase;protein_id=WP_110480717.1;transl_table=11 NZ_CP029015.1 RefSeq gene 191585 192580 . - . ID=gene-DDE69_RS01015;Name=DDE69_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01015 NZ_CP029015.1 Protein Homology CDS 191585 192580 . - 0 ID=cds-WP_110480645.1;Parent=gene-DDE69_RS01015;Dbxref=Genbank:WP_110480645.1;Name=WP_110480645.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799479.1;locus_tag=DDE69_RS01015;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_110480645.1;transl_table=11 NZ_CP029015.1 RefSeq gene 192629 192871 . - . ID=gene-DDE69_RS01020;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DDE69_RS01020 NZ_CP029015.1 Protein Homology CDS 192629 192871 . - 0 ID=cds-WP_110480646.1;Parent=gene-DDE69_RS01020;Dbxref=Genbank:WP_110480646.1;Name=WP_110480646.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799480.1;locus_tag=DDE69_RS01020;product=30S ribosomal protein S20;protein_id=WP_110480646.1;transl_table=11 NZ_CP029015.1 RefSeq gene 192894 192965 . - . ID=gene-DDE69_RS01025;Name=DDE69_RS01025;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS01025 NZ_CP029015.1 tRNAscan-SE tRNA 192894 192965 . - . ID=rna-DDE69_RS01025;Parent=gene-DDE69_RS01025;anticodon=(pos:complement(192930..192932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01025;product=tRNA-Glu NZ_CP029015.1 tRNAscan-SE exon 192894 192965 . - . ID=exon-DDE69_RS01025-1;Parent=rna-DDE69_RS01025;anticodon=(pos:complement(192930..192932));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01025;product=tRNA-Glu NZ_CP029015.1 RefSeq pseudogene 192972 194210 . - . ID=gene-DDE69_RS01030;Name=DDE69_RS01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE69_RS01030;pseudo=true NZ_CP029015.1 Protein Homology CDS 192972 194210 . - 0 ID=cds-DDE69_RS01030;Parent=gene-DDE69_RS01030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038611.1;locus_tag=DDE69_RS01030;product=3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq gene 194319 194888 . - . ID=gene-DDE69_RS01035;Name=DDE69_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01035 NZ_CP029015.1 GeneMarkS-2+ CDS 194319 194888 . - 0 ID=cds-WP_110480647.1;Parent=gene-DDE69_RS01035;Dbxref=Genbank:WP_110480647.1;Name=WP_110480647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01035;product=hypothetical protein;protein_id=WP_110480647.1;transl_table=11 NZ_CP029015.1 RefSeq gene 194858 195202 . - . ID=gene-DDE69_RS01040;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DDE69_RS01040 NZ_CP029015.1 Protein Homology CDS 194858 195202 . - 0 ID=cds-WP_110480648.1;Parent=gene-DDE69_RS01040;Dbxref=Genbank:WP_110480648.1;Name=WP_110480648.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799483.1;locus_tag=DDE69_RS01040;product=30S ribosomal protein S16;protein_id=WP_110480648.1;transl_table=11 NZ_CP029015.1 RefSeq gene 195266 195336 . + . ID=gene-DDE69_RS01045;Name=DDE69_RS01045;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS01045 NZ_CP029015.1 tRNAscan-SE tRNA 195266 195336 . + . ID=rna-DDE69_RS01045;Parent=gene-DDE69_RS01045;anticodon=(pos:195298..195300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01045;product=tRNA-Gln NZ_CP029015.1 tRNAscan-SE exon 195266 195336 . + . ID=exon-DDE69_RS01045-1;Parent=rna-DDE69_RS01045;anticodon=(pos:195298..195300);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01045;product=tRNA-Gln NZ_CP029015.1 RefSeq gene 195326 195730 . - . ID=gene-DDE69_RS01050;Name=DDE69_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01050 NZ_CP029015.1 Protein Homology CDS 195326 195730 . - 0 ID=cds-WP_239493751.1;Parent=gene-DDE69_RS01050;Dbxref=Genbank:WP_239493751.1;Name=WP_239493751.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014791362.1;locus_tag=DDE69_RS01050;product=GreA/GreB family elongation factor;protein_id=WP_239493751.1;transl_table=11 NZ_CP029015.1 RefSeq gene 196176 196274 . - . ID=gene-DDE69_RS01435;Name=DDE69_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01435 NZ_CP029015.1 Protein Homology CDS 196176 196274 . - 0 ID=cds-WP_239493752.1;Parent=gene-DDE69_RS01435;Dbxref=Genbank:WP_239493752.1;Name=WP_239493752.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012430.2;locus_tag=DDE69_RS01435;product=hypothetical protein;protein_id=WP_239493752.1;transl_table=11 NZ_CP029015.1 RefSeq gene 196719 197351 . - . ID=gene-DDE69_RS01060;Name=DDE69_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01060 NZ_CP029015.1 Protein Homology CDS 196719 197351 . - 0 ID=cds-WP_110480649.1;Parent=gene-DDE69_RS01060;Dbxref=Genbank:WP_110480649.1;Name=WP_110480649.1;Ontology_term=GO:0006364,GO:0008649,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315653.1;locus_tag=DDE69_RS01060;product=class I SAM-dependent methyltransferase;protein_id=WP_110480649.1;transl_table=11 NZ_CP029015.1 RefSeq gene 197363 198541 . + . ID=gene-DDE69_RS01065;Name=DDE69_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01065 NZ_CP029015.1 Protein Homology CDS 197363 198541 . + 0 ID=cds-WP_110480650.1;Parent=gene-DDE69_RS01065;Dbxref=Genbank:WP_110480650.1;Name=WP_110480650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799487.1;locus_tag=DDE69_RS01065;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_110480650.1;transl_table=11 NZ_CP029015.1 RefSeq gene 198816 199007 . + . ID=gene-DDE69_RS01070;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DDE69_RS01070 NZ_CP029015.1 Protein Homology CDS 198816 199007 . + 0 ID=cds-WP_110467401.1;Parent=gene-DDE69_RS01070;Dbxref=Genbank:WP_110467401.1;Name=WP_110467401.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799488.1;locus_tag=DDE69_RS01070;product=50S ribosomal protein L32;protein_id=WP_110467401.1;transl_table=11 NZ_CP029015.1 RefSeq gene 198979 199962 . - . ID=gene-DDE69_RS01075;Name=DDE69_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01075 NZ_CP029015.1 Protein Homology CDS 198979 199962 . - 0 ID=cds-WP_110480651.1;Parent=gene-DDE69_RS01075;Dbxref=Genbank:WP_110480651.1;Name=WP_110480651.1;Ontology_term=GO:0006086,GO:0004739;gbkey=CDS;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799489.1;locus_tag=DDE69_RS01075;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=WP_110480651.1;transl_table=11 NZ_CP029015.1 RefSeq gene 199964 201034 . - . ID=gene-DDE69_RS01080;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=DDE69_RS01080 NZ_CP029015.1 Protein Homology CDS 199964 201034 . - 0 ID=cds-WP_110480652.1;Parent=gene-DDE69_RS01080;Dbxref=Genbank:WP_110480652.1;Name=WP_110480652.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799490.1;locus_tag=DDE69_RS01080;product=class II fructose-bisphosphate aldolase;protein_id=WP_110480652.1;transl_table=11 NZ_CP029015.1 RefSeq gene 201391 201588 . + . ID=gene-DDE69_RS01090;Name=DDE69_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01090 NZ_CP029015.1 GeneMarkS-2+ CDS 201391 201588 . + 0 ID=cds-WP_110480654.1;Parent=gene-DDE69_RS01090;Dbxref=Genbank:WP_110480654.1;Name=WP_110480654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE69_RS01090;product=hypothetical protein;protein_id=WP_110480654.1;transl_table=11 NZ_CP029015.1 RefSeq gene 201733 202641 . - . ID=gene-DDE69_RS01095;Name=DDE69_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01095 NZ_CP029015.1 Protein Homology CDS 201733 202641 . - 0 ID=cds-WP_110480718.1;Parent=gene-DDE69_RS01095;Dbxref=Genbank:WP_110480718.1;Name=WP_110480718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038617.1;locus_tag=DDE69_RS01095;product=RNA polymerase sigma factor RpoD/SigA;protein_id=WP_110480718.1;transl_table=11 NZ_CP029015.1 RefSeq gene 202685 204757 . - . ID=gene-DDE69_RS01100;Name=DDE69_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01100 NZ_CP029015.1 Protein Homology CDS 202685 204757 . - 0 ID=cds-WP_110480655.1;Parent=gene-DDE69_RS01100;Dbxref=Genbank:WP_110480655.1;Name=WP_110480655.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799492.1;locus_tag=DDE69_RS01100;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_110480655.1;transl_table=11 NZ_CP029015.1 RefSeq gene 204800 205045 . - . ID=gene-DDE69_RS01105;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=DDE69_RS01105 NZ_CP029015.1 Protein Homology CDS 204800 205045 . - 0 ID=cds-WP_110480656.1;Parent=gene-DDE69_RS01105;Dbxref=Genbank:WP_110480656.1;Name=WP_110480656.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007096857.1;locus_tag=DDE69_RS01105;product=30S ribosomal protein S15;protein_id=WP_110480656.1;transl_table=11 NZ_CP029015.1 RefSeq gene 205411 205659 . + . ID=gene-DDE69_RS01110;Name=DDE69_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01110 NZ_CP029015.1 Protein Homology CDS 205411 205659 . + 0 ID=cds-WP_110480657.1;Parent=gene-DDE69_RS01110;Dbxref=Genbank:WP_110480657.1;Name=WP_110480657.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799495.1;locus_tag=DDE69_RS01110;product=type B 50S ribosomal protein L31;protein_id=WP_110480657.1;transl_table=11 NZ_CP029015.1 RefSeq gene 205754 206140 . + . ID=gene-DDE69_RS01115;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=DDE69_RS01115 NZ_CP029015.1 Protein Homology CDS 205754 206140 . + 0 ID=cds-WP_110480658.1;Parent=gene-DDE69_RS01115;Dbxref=Genbank:WP_110480658.1;Name=WP_110480658.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015264121.1;locus_tag=DDE69_RS01115;product=30S ribosomal protein S12;protein_id=WP_110480658.1;transl_table=11 NZ_CP029015.1 RefSeq gene 206127 206603 . + . ID=gene-DDE69_RS01120;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=DDE69_RS01120 NZ_CP029015.1 Protein Homology CDS 206127 206603 . + 0 ID=cds-WP_110480719.1;Parent=gene-DDE69_RS01120;Dbxref=Genbank:WP_110480719.1;Name=WP_110480719.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007803600.1;locus_tag=DDE69_RS01120;product=30S ribosomal protein S7;protein_id=WP_110480719.1;transl_table=11 NZ_CP029015.1 RefSeq gene 206610 208700 . + . ID=gene-DDE69_RS01125;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DDE69_RS01125 NZ_CP029015.1 Protein Homology CDS 206610 208700 . + 0 ID=cds-WP_110480659.1;Parent=gene-DDE69_RS01125;Dbxref=Genbank:WP_110480659.1;Name=WP_110480659.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038623.1;locus_tag=DDE69_RS01125;product=elongation factor G;protein_id=WP_110480659.1;transl_table=11 NZ_CP029015.1 RefSeq gene 208706 209017 . + . ID=gene-DDE69_RS01130;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=DDE69_RS01130 NZ_CP029015.1 Protein Homology CDS 208706 209017 . + 0 ID=cds-WP_204352354.1;Parent=gene-DDE69_RS01130;Dbxref=Genbank:WP_204352354.1;Name=WP_204352354.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799499.1;locus_tag=DDE69_RS01130;product=30S ribosomal protein S10;protein_id=WP_204352354.1;transl_table=11 NZ_CP029015.1 RefSeq gene 209038 209655 . + . ID=gene-DDE69_RS01135;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=DDE69_RS01135 NZ_CP029015.1 Protein Homology CDS 209038 209655 . + 0 ID=cds-WP_110480660.1;Parent=gene-DDE69_RS01135;Dbxref=Genbank:WP_110480660.1;Name=WP_110480660.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799500.1;locus_tag=DDE69_RS01135;product=50S ribosomal protein L3;protein_id=WP_110480660.1;transl_table=11 NZ_CP029015.1 RefSeq gene 209659 210279 . + . ID=gene-DDE69_RS01140;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DDE69_RS01140 NZ_CP029015.1 Protein Homology CDS 209659 210279 . + 0 ID=cds-WP_110480661.1;Parent=gene-DDE69_RS01140;Dbxref=Genbank:WP_110480661.1;Name=WP_110480661.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038625.1;locus_tag=DDE69_RS01140;product=50S ribosomal protein L4;protein_id=WP_110480661.1;transl_table=11 NZ_CP029015.1 RefSeq pseudogene 210285 210512 . + . ID=gene-DDE69_RS01440;Name=rplW;end_range=210512,.;gbkey=Gene;gene=rplW;gene_biotype=pseudogene;locus_tag=DDE69_RS01440;partial=true;pseudo=true NZ_CP029015.1 Protein Homology CDS 210285 210512 . + 0 ID=cds-DDE69_RS01440;Parent=gene-DDE69_RS01440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0005840;end_range=210512,.;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012498.2;locus_tag=DDE69_RS01440;partial=true;product=50S ribosomal protein L23;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq pseudogene 210765 211653 . + . ID=gene-DDE69_RS01150;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=pseudogene;locus_tag=DDE69_RS01150;pseudo=true NZ_CP029015.1 Protein Homology CDS 210765 211653 . + 0 ID=cds-DDE69_RS01150;Parent=gene-DDE69_RS01150;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799503.1;locus_tag=DDE69_RS01150;product=50S ribosomal protein L2;pseudo=true;transl_table=11 NZ_CP029015.1 RefSeq gene 211663 211947 . + . ID=gene-DDE69_RS01155;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=DDE69_RS01155 NZ_CP029015.1 Protein Homology CDS 211663 211947 . + 0 ID=cds-WP_110480664.1;Parent=gene-DDE69_RS01155;Dbxref=Genbank:WP_110480664.1;Name=WP_110480664.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799504.1;locus_tag=DDE69_RS01155;product=30S ribosomal protein S19;protein_id=WP_110480664.1;transl_table=11 NZ_CP029015.1 RefSeq gene 211949 212332 . + . ID=gene-DDE69_RS01160;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=DDE69_RS01160 NZ_CP029015.1 Protein Homology CDS 211949 212332 . + 0 ID=cds-WP_110480665.1;Parent=gene-DDE69_RS01160;Dbxref=Genbank:WP_110480665.1;Name=WP_110480665.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799505.1;locus_tag=DDE69_RS01160;product=50S ribosomal protein L22;protein_id=WP_110480665.1;transl_table=11 NZ_CP029015.1 RefSeq gene 212340 213056 . + . ID=gene-DDE69_RS01165;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=DDE69_RS01165 NZ_CP029015.1 Protein Homology CDS 212340 213056 . + 0 ID=cds-WP_110480721.1;Parent=gene-DDE69_RS01165;Dbxref=Genbank:WP_110480721.1;Name=WP_110480721.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799506.1;locus_tag=DDE69_RS01165;product=30S ribosomal protein S3;protein_id=WP_110480721.1;transl_table=11 NZ_CP029015.1 RefSeq gene 213069 213479 . + . ID=gene-DDE69_RS01170;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=DDE69_RS01170 NZ_CP029015.1 Protein Homology CDS 213069 213479 . + 0 ID=cds-WP_015799507.1;Parent=gene-DDE69_RS01170;Dbxref=Genbank:WP_015799507.1;Name=WP_015799507.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315674.1;locus_tag=DDE69_RS01170;product=50S ribosomal protein L16;protein_id=WP_015799507.1;transl_table=11 NZ_CP029015.1 RefSeq gene 213472 213723 . + . ID=gene-DDE69_RS01175;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=DDE69_RS01175 NZ_CP029015.1 Protein Homology CDS 213472 213723 . + 0 ID=cds-WP_110480666.1;Parent=gene-DDE69_RS01175;Dbxref=Genbank:WP_110480666.1;Name=WP_110480666.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743743.1;locus_tag=DDE69_RS01175;product=30S ribosomal protein S17;protein_id=WP_110480666.1;transl_table=11 NZ_CP029015.1 RefSeq gene 213725 214093 . + . ID=gene-DDE69_RS01180;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=DDE69_RS01180 NZ_CP029015.1 Protein Homology CDS 213725 214093 . + 0 ID=cds-WP_110480667.1;Parent=gene-DDE69_RS01180;Dbxref=Genbank:WP_110480667.1;Name=WP_110480667.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743742.1;locus_tag=DDE69_RS01180;product=50S ribosomal protein L14;protein_id=WP_110480667.1;transl_table=11 NZ_CP029015.1 RefSeq gene 214090 214356 . + . ID=gene-DDE69_RS01185;Name=DDE69_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01185 NZ_CP029015.1 Protein Homology CDS 214090 214356 . + 0 ID=cds-WP_110480668.1;Parent=gene-DDE69_RS01185;Dbxref=Genbank:WP_110480668.1;Name=WP_110480668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028446.2;locus_tag=DDE69_RS01185;product=hypothetical protein;protein_id=WP_110480668.1;transl_table=11 NZ_CP029015.1 RefSeq gene 214375 214923 . + . ID=gene-DDE69_RS01190;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=DDE69_RS01190 NZ_CP029015.1 Protein Homology CDS 214375 214923 . + 0 ID=cds-WP_110480722.1;Parent=gene-DDE69_RS01190;Dbxref=Genbank:WP_110480722.1;Name=WP_110480722.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315678.1;locus_tag=DDE69_RS01190;product=50S ribosomal protein L5;protein_id=WP_110480722.1;transl_table=11 NZ_CP029015.1 RefSeq gene 214929 215198 . + . ID=gene-DDE69_RS01195;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=DDE69_RS01195 NZ_CP029015.1 Protein Homology CDS 214929 215198 . + 0 ID=cds-WP_015799512.1;Parent=gene-DDE69_RS01195;Dbxref=Genbank:WP_015799512.1;Name=WP_015799512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738440.1;locus_tag=DDE69_RS01195;product=30S ribosomal protein S14;protein_id=WP_015799512.1;transl_table=11 NZ_CP029015.1 RefSeq gene 215240 215641 . + . ID=gene-DDE69_RS01200;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=DDE69_RS01200 NZ_CP029015.1 Protein Homology CDS 215240 215641 . + 0 ID=cds-WP_110480669.1;Parent=gene-DDE69_RS01200;Dbxref=Genbank:WP_110480669.1;Name=WP_110480669.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743739.1;locus_tag=DDE69_RS01200;product=30S ribosomal protein S8;protein_id=WP_110480669.1;transl_table=11 NZ_CP029015.1 RefSeq gene 215654 216202 . + . ID=gene-DDE69_RS01205;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=DDE69_RS01205 NZ_CP029015.1 Protein Homology CDS 215654 216202 . + 0 ID=cds-WP_110480670.1;Parent=gene-DDE69_RS01205;Dbxref=Genbank:WP_110480670.1;Name=WP_110480670.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038631.1;locus_tag=DDE69_RS01205;product=50S ribosomal protein L6;protein_id=WP_110480670.1;transl_table=11 NZ_CP029015.1 RefSeq gene 216203 216514 . + . ID=gene-DDE69_RS01210;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=DDE69_RS01210 NZ_CP029015.1 Protein Homology CDS 216203 216514 . + 0 ID=cds-WP_110480671.1;Parent=gene-DDE69_RS01210;Dbxref=Genbank:WP_110480671.1;Name=WP_110480671.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020931726.1;locus_tag=DDE69_RS01210;product=50S ribosomal protein L18;protein_id=WP_110480671.1;transl_table=11 NZ_CP029015.1 RefSeq gene 216520 217059 . + . ID=gene-DDE69_RS01215;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=DDE69_RS01215 NZ_CP029015.1 Protein Homology CDS 216520 217059 . + 0 ID=cds-WP_110480723.1;Parent=gene-DDE69_RS01215;Dbxref=Genbank:WP_110480723.1;Name=WP_110480723.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007136549.1;locus_tag=DDE69_RS01215;product=30S ribosomal protein S5;protein_id=WP_110480723.1;transl_table=11 NZ_CP029015.1 RefSeq gene 217059 217229 . + . ID=gene-DDE69_RS01220;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=DDE69_RS01220 NZ_CP029015.1 Protein Homology CDS 217059 217229 . + 0 ID=cds-WP_110480672.1;Parent=gene-DDE69_RS01220;Dbxref=Genbank:WP_110480672.1;Name=WP_110480672.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016197780.1;locus_tag=DDE69_RS01220;product=50S ribosomal protein L30;protein_id=WP_110480672.1;transl_table=11 NZ_CP029015.1 RefSeq gene 217238 217687 . + . ID=gene-DDE69_RS01225;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=DDE69_RS01225 NZ_CP029015.1 Protein Homology CDS 217238 217687 . + 0 ID=cds-WP_110480673.1;Parent=gene-DDE69_RS01225;Dbxref=Genbank:WP_110480673.1;Name=WP_110480673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799517.1;locus_tag=DDE69_RS01225;product=50S ribosomal protein L15;protein_id=WP_110480673.1;transl_table=11 NZ_CP029015.1 RefSeq gene 217684 218973 . + . ID=gene-DDE69_RS01230;Name=DDE69_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01230 NZ_CP029015.1 Protein Homology CDS 217684 218973 . + 0 ID=cds-WP_110480674.1;Parent=gene-DDE69_RS01230;Dbxref=Genbank:WP_110480674.1;Name=WP_110480674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315685.1;locus_tag=DDE69_RS01230;product=preprotein translocase subunit SecY;protein_id=WP_110480674.1;transl_table=11 NZ_CP029015.1 RefSeq gene 218987 219202 . + . ID=gene-DDE69_RS01235;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=DDE69_RS01235 NZ_CP029015.1 Protein Homology CDS 218987 219202 . + 0 ID=cds-WP_110480675.1;Parent=gene-DDE69_RS01235;Dbxref=Genbank:WP_110480675.1;Name=WP_110480675.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009779202.1;locus_tag=DDE69_RS01235;product=translation initiation factor IF-1;protein_id=WP_110480675.1;transl_table=11 NZ_CP029015.1 RefSeq gene 219220 219336 . + . ID=gene-DDE69_RS01240;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DDE69_RS01240 NZ_CP029015.1 Protein Homology CDS 219220 219336 . + 0 ID=cds-WP_110480676.1;Parent=gene-DDE69_RS01240;Dbxref=Genbank:WP_110480676.1;Name=WP_110480676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmJ;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=DDE69_RS01240;product=50S ribosomal protein L36;protein_id=WP_110480676.1;transl_table=11 NZ_CP029015.1 RefSeq gene 219341 219748 . + . ID=gene-DDE69_RS01245;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=DDE69_RS01245 NZ_CP029015.1 Protein Homology CDS 219341 219748 . + 0 ID=cds-WP_110480677.1;Parent=gene-DDE69_RS01245;Dbxref=Genbank:WP_110480677.1;Name=WP_110480677.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799520.1;locus_tag=DDE69_RS01245;product=30S ribosomal protein S13;protein_id=WP_110480677.1;transl_table=11 NZ_CP029015.1 RefSeq gene 219748 220110 . + . ID=gene-DDE69_RS01250;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=DDE69_RS01250 NZ_CP029015.1 Protein Homology CDS 219748 220110 . + 0 ID=cds-WP_110480678.1;Parent=gene-DDE69_RS01250;Dbxref=Genbank:WP_110480678.1;Name=WP_110480678.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315689.1;locus_tag=DDE69_RS01250;product=30S ribosomal protein S11;protein_id=WP_110480678.1;transl_table=11 NZ_CP029015.1 RefSeq gene 220126 220758 . + . ID=gene-DDE69_RS01255;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=DDE69_RS01255 NZ_CP029015.1 Protein Homology CDS 220126 220758 . + 0 ID=cds-WP_110480679.1;Parent=gene-DDE69_RS01255;Dbxref=Genbank:WP_110480679.1;Name=WP_110480679.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019039511.1;locus_tag=DDE69_RS01255;product=30S ribosomal protein S4;protein_id=WP_110480679.1;transl_table=11 NZ_CP029015.1 RefSeq gene 220802 221818 . + . ID=gene-DDE69_RS01260;Name=DDE69_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01260 NZ_CP029015.1 Protein Homology CDS 220802 221818 . + 0 ID=cds-WP_110480680.1;Parent=gene-DDE69_RS01260;Dbxref=Genbank:WP_110480680.1;Name=WP_110480680.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799523.1;locus_tag=DDE69_RS01260;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_110480680.1;transl_table=11 NZ_CP029015.1 RefSeq gene 221815 222183 . + . ID=gene-DDE69_RS01265;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DDE69_RS01265 NZ_CP029015.1 Protein Homology CDS 221815 222183 . + 0 ID=cds-WP_110480681.1;Parent=gene-DDE69_RS01265;Dbxref=Genbank:WP_110480681.1;Name=WP_110480681.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799524.1;locus_tag=DDE69_RS01265;product=50S ribosomal protein L17;protein_id=WP_110480681.1;transl_table=11 NZ_CP029015.1 RefSeq gene 222180 222974 . - . ID=gene-DDE69_RS01270;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DDE69_RS01270 NZ_CP029015.1 Protein Homology CDS 222180 222974 . - 0 ID=cds-WP_110480682.1;Parent=gene-DDE69_RS01270;Dbxref=Genbank:WP_110480682.1;Name=WP_110480682.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315693.1;locus_tag=DDE69_RS01270;product=diaminopimelate epimerase;protein_id=WP_110480682.1;transl_table=11 NZ_CP029015.1 RefSeq gene 223031 223948 . + . ID=gene-DDE69_RS01275;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=DDE69_RS01275 NZ_CP029015.1 Protein Homology CDS 223031 223948 . + 0 ID=cds-WP_110480683.1;Parent=gene-DDE69_RS01275;Dbxref=Genbank:WP_110480683.1;Name=WP_110480683.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743932.1;locus_tag=DDE69_RS01275;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_110480683.1;transl_table=11 NZ_CP029015.1 RefSeq gene 223938 224256 . - . ID=gene-DDE69_RS01280;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=DDE69_RS01280 NZ_CP029015.1 cmsearch RNase_P_RNA 223938 224256 . - . ID=rna-DDE69_RS01280;Parent=gene-DDE69_RS01280;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS01280;product=RNase P RNA component class A NZ_CP029015.1 cmsearch exon 223938 224256 . - . ID=exon-DDE69_RS01280-1;Parent=rna-DDE69_RS01280;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE69_RS01280;product=RNase P RNA component class A NZ_CP029015.1 RefSeq gene 224274 225635 . - . ID=gene-DDE69_RS01285;Name=DDE69_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01285 NZ_CP029015.1 Protein Homology CDS 224274 225635 . - 0 ID=cds-WP_110480684.1;Parent=gene-DDE69_RS01285;Dbxref=Genbank:WP_110480684.1;Name=WP_110480684.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799526.1;locus_tag=DDE69_RS01285;product=aldehyde dehydrogenase family protein;protein_id=WP_110480684.1;transl_table=11 NZ_CP029015.1 RefSeq gene 225636 227270 . - . ID=gene-DDE69_RS01290;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=DDE69_RS01290 NZ_CP029015.1 Protein Homology CDS 225636 227270 . - 0 ID=cds-WP_110480685.1;Parent=gene-DDE69_RS01290;Dbxref=Genbank:WP_110480685.1;Name=WP_110480685.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799527.1;locus_tag=DDE69_RS01290;product=DNA mismatch repair endonuclease MutL;protein_id=WP_110480685.1;transl_table=11 NZ_CP029015.1 RefSeq gene 227314 228651 . + . ID=gene-DDE69_RS01295;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=DDE69_RS01295 NZ_CP029015.1 Protein Homology CDS 227314 228651 . + 0 ID=cds-WP_110480686.1;Parent=gene-DDE69_RS01295;Dbxref=Genbank:WP_110480686.1;Name=WP_110480686.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220902.1;locus_tag=DDE69_RS01295;product=argininosuccinate lyase;protein_id=WP_110480686.1;transl_table=11 NZ_CP029015.1 RefSeq gene 228648 230147 . - . ID=gene-DDE69_RS01300;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DDE69_RS01300 NZ_CP029015.1 Protein Homology CDS 228648 230147 . - 0 ID=cds-WP_110480687.1;Parent=gene-DDE69_RS01300;Dbxref=Genbank:WP_110480687.1;Name=WP_110480687.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799529.1;locus_tag=DDE69_RS01300;product=lysine--tRNA ligase;protein_id=WP_110480687.1;transl_table=11 NZ_CP029015.1 RefSeq gene 230173 230246 . - . ID=gene-DDE69_RS01305;Name=DDE69_RS01305;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE69_RS01305 NZ_CP029015.1 tRNAscan-SE tRNA 230173 230246 . - . ID=rna-DDE69_RS01305;Parent=gene-DDE69_RS01305;anticodon=(pos:complement(230210..230212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01305;product=tRNA-Arg NZ_CP029015.1 tRNAscan-SE exon 230173 230246 . - . ID=exon-DDE69_RS01305-1;Parent=rna-DDE69_RS01305;anticodon=(pos:complement(230210..230212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE69_RS01305;product=tRNA-Arg NZ_CP029015.1 RefSeq gene 230298 231299 . + . ID=gene-DDE69_RS01310;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=DDE69_RS01310 NZ_CP029015.1 Protein Homology CDS 230298 231299 . + 0 ID=cds-WP_110480688.1;Parent=gene-DDE69_RS01310;Dbxref=Genbank:WP_110480688.1;Name=WP_110480688.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799530.1;locus_tag=DDE69_RS01310;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_110480688.1;transl_table=11 NZ_CP029015.1 RefSeq gene 231303 232397 . + . ID=gene-DDE69_RS01315;Name=DDE69_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01315 NZ_CP029015.1 Protein Homology CDS 231303 232397 . + 0 ID=cds-WP_110480689.1;Parent=gene-DDE69_RS01315;Dbxref=Genbank:WP_110480689.1;Name=WP_110480689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799531.1;locus_tag=DDE69_RS01315;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110480689.1;transl_table=11 NZ_CP029015.1 RefSeq gene 232721 232909 . - . ID=gene-DDE69_RS01445;Name=DDE69_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01445 NZ_CP029015.1 Protein Homology CDS 232721 232909 . - 0 ID=cds-WP_239493742.1;Parent=gene-DDE69_RS01445;Dbxref=Genbank:WP_239493742.1;Name=WP_239493742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015686.2;locus_tag=DDE69_RS01445;product=hypothetical protein;protein_id=WP_239493742.1;transl_table=11 NZ_CP029015.1 RefSeq gene 233093 234115 . + . ID=gene-DDE69_RS01325;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=DDE69_RS01325 NZ_CP029015.1 Protein Homology CDS 233093 234115 . + 0 ID=cds-WP_110480690.1;Parent=gene-DDE69_RS01325;Dbxref=Genbank:WP_110480690.1;Name=WP_110480690.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799533.1;locus_tag=DDE69_RS01325;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_110480690.1;transl_table=11 NZ_CP029015.1 RefSeq gene 234112 234531 . - . ID=gene-DDE69_RS01330;Name=DDE69_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01330 NZ_CP029015.1 Protein Homology CDS 234112 234531 . - 0 ID=cds-WP_204352356.1;Parent=gene-DDE69_RS01330;Dbxref=Genbank:WP_204352356.1;Name=WP_204352356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799534.1;locus_tag=DDE69_RS01330;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=WP_204352356.1;transl_table=11 NZ_CP029015.1 RefSeq gene 234536 235498 . + . ID=gene-DDE69_RS01335;Name=DDE69_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01335 NZ_CP029015.1 Protein Homology CDS 234536 235498 . + 0 ID=cds-WP_110480691.1;Parent=gene-DDE69_RS01335;Dbxref=Genbank:WP_110480691.1;Name=WP_110480691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017911.2;locus_tag=DDE69_RS01335;product=hypothetical protein;protein_id=WP_110480691.1;transl_table=11 NZ_CP029015.1 RefSeq gene 235495 236430 . + . ID=gene-DDE69_RS01340;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=DDE69_RS01340 NZ_CP029015.1 Protein Homology CDS 235495 236430 . + 0 ID=cds-WP_110480692.1;Parent=gene-DDE69_RS01340;Dbxref=Genbank:WP_110480692.1;Name=WP_110480692.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799536.1;locus_tag=DDE69_RS01340;product=thioredoxin-disulfide reductase;protein_id=WP_110480692.1;transl_table=11 NZ_CP029015.1 RefSeq gene 236427 237173 . + . ID=gene-DDE69_RS01345;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=DDE69_RS01345 NZ_CP029015.1 Protein Homology CDS 236427 237173 . + 0 ID=cds-WP_110480693.1;Parent=gene-DDE69_RS01345;Dbxref=Genbank:WP_110480693.1;Name=WP_110480693.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726582.1;locus_tag=DDE69_RS01345;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_110480693.1;transl_table=11 NZ_CP029015.1 RefSeq gene 237170 238165 . - . ID=gene-DDE69_RS01350;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=DDE69_RS01350 NZ_CP029015.1 Protein Homology CDS 237170 238165 . - 0 ID=cds-WP_110480694.1;Parent=gene-DDE69_RS01350;Dbxref=Genbank:WP_110480694.1;Name=WP_110480694.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220899.1;locus_tag=DDE69_RS01350;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_110480694.1;transl_table=11 NZ_CP029015.1 RefSeq gene 238169 239428 . - . ID=gene-DDE69_RS01355;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=DDE69_RS01355 NZ_CP029015.1 Protein Homology CDS 238169 239428 . - 0 ID=cds-WP_110480695.1;Parent=gene-DDE69_RS01355;Dbxref=Genbank:WP_110480695.1;Name=WP_110480695.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220898.1;locus_tag=DDE69_RS01355;product=threonine ammonia-lyase;protein_id=WP_110480695.1;transl_table=11 NZ_CP029015.1 RefSeq gene 239487 240521 . - . ID=gene-DDE69_RS01360;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=DDE69_RS01360 NZ_CP029015.1 Protein Homology CDS 239487 240521 . - 0 ID=cds-WP_110480696.1;Parent=gene-DDE69_RS01360;Dbxref=Genbank:WP_110480696.1;Name=WP_110480696.1;Ontology_term=GO:0009097,GO:0009099,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743785.1;locus_tag=DDE69_RS01360;product=ketol-acid reductoisomerase;protein_id=WP_110480696.1;transl_table=11 NZ_CP029015.1 RefSeq gene 240524 240808 . - . ID=gene-DDE69_RS01365;Name=DDE69_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE69_RS01365 NZ_CP029015.1 Protein Homology CDS 240524 240808 . - 0 ID=cds-WP_110480697.1;Parent=gene-DDE69_RS01365;Dbxref=Genbank:WP_110480697.1;Name=WP_110480697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799541.1;locus_tag=DDE69_RS01365;product=acetolactate synthase;protein_id=WP_110480697.1;transl_table=11 NZ_CP029015.1 RefSeq gene 240789 242486 . - . ID=gene-DDE69_RS01370;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=DDE69_RS01370 NZ_CP029015.1 Protein Homology CDS 240789 242486 . - 0 ID=cds-WP_110480698.1;Parent=gene-DDE69_RS01370;Dbxref=Genbank:WP_110480698.1;Name=WP_110480698.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014791290.1;locus_tag=DDE69_RS01370;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_110480698.1;transl_table=11 NZ_CP029015.1 RefSeq gene 242489 244171 . - . ID=gene-DDE69_RS01375;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=DDE69_RS01375 NZ_CP029015.1 Protein Homology CDS 242489 244171 . - 0 ID=cds-WP_110480699.1;Parent=gene-DDE69_RS01375;Dbxref=Genbank:WP_110480699.1;Name=WP_110480699.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799543.1;locus_tag=DDE69_RS01375;product=dihydroxy-acid dehydratase;protein_id=WP_110480699.1;transl_table=11 ###