CKBE_RS00060	SM00479	CKBE_RS00060
CKBE_RS00070	SM00849	Metallo-beta-lactamase superfamily
CKBE_RS00075	SM00257	Lysin motif
CKBE_RS00085	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS00110	SM00363	S4 RNA-binding domain
CKBE_RS00125	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CKBE_RS00175	SM00878	Biotin carboxylase C-terminal domain
CKBE_RS00190	SM00955	CKBE_RS00190
CKBE_RS00210	SM00732	Likely ribonuclease with RNase H fold.
CKBE_RS00255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CKBE_RS00255	SM00245	tail specific protease
CKBE_RS00260	SM00855	Phosphoglycerate mutase family
CKBE_RS00265	SM00450	Rhodanese Homology Domain
CKBE_RS00290	SM00448	cheY-homologous receiver domain
CKBE_RS00320	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS00325	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS00340	SM00116	Domain in cystathionine beta-synthase and other proteins.
CKBE_RS00440	SM00845	GatB domain
CKBE_RS00460	SM00986	Uracil DNA glycosylase superfamily
CKBE_RS00460	SM00987	UreE urease accessory protein, C-terminal domain 
CKBE_RS00465	SM00487	DEAD-like helicases superfamily
CKBE_RS00465	SM00490	helicase superfamily c-terminal domain
CKBE_RS00510	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CKBE_RS00525	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS00525	SM01086	C-terminal, D2-small domain, of ClpB protein
CKBE_RS00535	SM00936	Penicillin-binding protein 5, C-terminal domain 
CKBE_RS00610	SM01219	CKBE_RS00610
CKBE_RS00625	SM01004	Delta-aminolevulinic acid dehydratase
CKBE_RS00635	SM00662	RNA polymerases D
CKBE_RS00640	SM00363	S4 RNA-binding domain
CKBE_RS00640	SM01390	CKBE_RS00640
CKBE_RS00710	SM01374	CKBE_RS00710
CKBE_RS00730	SM00322	K homology RNA-binding domain
CKBE_RS00745	SM01382	CKBE_RS00745
CKBE_RS00745	SM01383	CKBE_RS00745
CKBE_RS00765	SM01403	CKBE_RS00765
CKBE_RS00775	SM00838	Elongation factor G C-terminus
CKBE_RS00775	SM00889	Elongation factor G, domain IV
CKBE_RS00790	SM00663	RNA polymerase I subunit A N-terminus
CKBE_RS00815	SM00649	Ribosomal protein L11/L12
CKBE_RS00820	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CKBE_RS00820	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CKBE_RS00860	SM01228	CKBE_RS00860
CKBE_RS00875	SM01234	CKBE_RS00875
CKBE_RS00885	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS00885	SM00760	Bacterial dnaA protein helix-turn-helix domain
CKBE_RS00890	SM00480	DNA polymerase III beta subunit
CKBE_RS00895	SM00387	Histidine kinase-like ATPases
CKBE_RS00895	SM00433	TopoisomeraseII
CKBE_RS00905	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CKBE_RS00905	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CKBE_RS00905	SM00493	CKBE_RS00905
CKBE_RS00920	SM00836	DALR anticodon binding domain
CKBE_RS00920	SM01016	Arginyl tRNA synthetase N terminal dom
CKBE_RS00925	SM00917	LeuA allosteric (dimerisation) domain
CKBE_RS01025	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01050	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01060	SM00100	Cyclic nucleotide-monophosphate binding domain
CKBE_RS01120	SM00905	Dihydroneopterin aldolase
CKBE_RS01165	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01180	SM00487	DEAD-like helicases superfamily
CKBE_RS01180	SM00490	helicase superfamily c-terminal domain
CKBE_RS01205	SM00978	CKBE_RS01205
CKBE_RS01250	SM00937	CKBE_RS01250
CKBE_RS01270	SM00947	Carbonic anhydrase
CKBE_RS01300	SM00387	Histidine kinase-like ATPases
CKBE_RS01305	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01305	SM00962	SRP54-type protein, GTPase domain
CKBE_RS01305	SM00963	SRP54-type protein, helical bundle domain
CKBE_RS01365	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CKBE_RS01365	SM01232	CKBE_RS01365
CKBE_RS01385	SM01400	CKBE_RS01385
CKBE_RS01420	SM00883	Chaperonin 10 Kd subunit
CKBE_RS01440	SM00650	Ribosomal RNA adenine dimethylases
CKBE_RS01445	SM00116	Domain in cystathionine beta-synthase and other proteins.
CKBE_RS01445	SM00924	MgtE intracellular N domain
CKBE_RS01485	SM00116	Domain in cystathionine beta-synthase and other proteins.
CKBE_RS01485	SM01091	Transporter associated domain
CKBE_RS01500	SM00729	Elongator protein 3, MiaB family, Radical SAM
CKBE_RS01515	SM01323	CKBE_RS01515
CKBE_RS01540	SM00861	Transketolase, pyrimidine binding domain
CKBE_RS01545	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CKBE_RS01570	SM01001	AIR carboxylase
CKBE_RS01605	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01615	SM00493	CKBE_RS01615
CKBE_RS01625	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CKBE_RS01630	SM00851	MGS-like domain
CKBE_RS01630	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CKBE_RS01640	SM01103	CKBE_RS01640
CKBE_RS01650	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01685	SM01130	CKBE_RS01685
CKBE_RS01690	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CKBE_RS01690	SM00534	ATPase domain of DNA mismatch repair MUTS family
CKBE_RS01705	SM01091	Transporter associated domain
CKBE_RS01730	SM00840	CKBE_RS01730
CKBE_RS01735	SM00478	endonuclease III
CKBE_RS01770	SM00841	Elongation factor P, C-terminal
CKBE_RS01770	SM01185	CKBE_RS01770
CKBE_RS01820	SM01209	CKBE_RS01820
CKBE_RS01820	SM01210	CKBE_RS01820
CKBE_RS01840	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS01855	SM00881	CoA binding domain
CKBE_RS01905	SM01329	CKBE_RS01905
CKBE_RS01910	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CKBE_RS01930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CKBE_RS01970	SM00904	Riboflavin kinase
CKBE_RS02010	SM00357	Cold shock protein domain
CKBE_RS02025	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS02025	SM00994	ClpX C4-type zinc finger
CKBE_RS02025	SM01086	C-terminal, D2-small domain, of ClpB protein
CKBE_RS02030	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS02030	SM00464	Found in ATP-dependent protease La (LON)
CKBE_RS02040	SM00487	DEAD-like helicases superfamily
CKBE_RS02040	SM00490	helicase superfamily c-terminal domain
CKBE_RS02045	SM00226	Low molecular weight phosphatase family
CKBE_RS02070	SM00271	DnaJ molecular chaperone homology domain
CKBE_RS02090	SM00937	CKBE_RS02090
CKBE_RS02125	SM01207	CKBE_RS02125
CKBE_RS02135	SM00257	Lysin motif
CKBE_RS02160	SM00962	SRP54-type protein, GTPase domain
CKBE_RS02160	SM00963	SRP54-type protein, helical bundle domain
CKBE_RS02185	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CKBE_RS02190	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CKBE_RS02190	SM00954	Region found in RelA / SpoT proteins
CKBE_RS02195	SM01409	CKBE_RS02195
CKBE_RS02200	SM00072	Guanylate kinase homologues.
CKBE_RS02255	SM00357	Cold shock protein domain
CKBE_RS02280	SM00873	B3/4 domain
CKBE_RS02280	SM00874	tRNA synthetase B5 domain
CKBE_RS02280	SM00896	Ferredoxin-fold anticodon binding domain
CKBE_RS02285	SM00411	bacterial (prokaryotic) histone like domain
CKBE_RS02290	SM00422	helix_turn_helix, mercury resistance
CKBE_RS02345	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS02355	SM01211	CKBE_RS02355
CKBE_RS02435	SM00935	Outer membrane protein (OmpH-like)
CKBE_RS02530	SM00116	Domain in cystathionine beta-synthase and other proteins.
CKBE_RS02530	SM01240	CKBE_RS02530
CKBE_RS02545	SM00487	DEAD-like helicases superfamily
CKBE_RS02545	SM00490	helicase superfamily c-terminal domain
CKBE_RS02560	SM00729	Elongator protein 3, MiaB family, Radical SAM
CKBE_RS02580	SM00411	bacterial (prokaryotic) histone like domain
CKBE_RS02585	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CKBE_RS02590	SM00955	CKBE_RS02590
CKBE_RS02655	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS02685	SM00861	Transketolase, pyrimidine binding domain
CKBE_RS02715	SM00400	zinc finger
CKBE_RS02715	SM00493	CKBE_RS02715
CKBE_RS02725	SM00788	Adenylosuccinate synthetase
CKBE_RS02735	SM00244	prohibitin homologues
CKBE_RS02740	SM00244	prohibitin homologues
CKBE_RS02780	SM00562	CKBE_RS02780
CKBE_RS02810	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CKBE_RS02820	SM00357	Cold shock protein domain
CKBE_RS02820	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS02820	SM00959	Rho termination factor, N-terminal domain
CKBE_RS02835	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CKBE_RS02835	SM00474	3'-5' exonuclease
CKBE_RS02835	SM00475	5'-3' exonuclease
CKBE_RS02835	SM00482	DNA polymerase A domain
CKBE_RS02860	SM00316	Ribosomal protein S1-like RNA-binding domain
CKBE_RS02870	SM00363	S4 RNA-binding domain
CKBE_RS02895	SM00479	CKBE_RS02895
CKBE_RS02910	SM00893	Electron transfer flavoprotein domain
CKBE_RS02915	SM00893	Electron transfer flavoprotein domain
CKBE_RS02925	SM00411	bacterial (prokaryotic) histone like domain
CKBE_RS02930	SM00316	Ribosomal protein S1-like RNA-binding domain
CKBE_RS02955	SM00830	Chorismate mutase type II
CKBE_RS02965	SM00434	DNA Topoisomerase IV
CKBE_RS02980	SM00363	S4 RNA-binding domain
CKBE_RS03005	SM00861	Transketolase, pyrimidine binding domain
CKBE_RS03010	SM00919	Malic enzyme, NAD binding domain
CKBE_RS03010	SM01274	CKBE_RS03010
CKBE_RS03015	SM00981	CKBE_RS03015
CKBE_RS03020	SM01192	CKBE_RS03020
CKBE_RS03020	SM01193	CKBE_RS03020
CKBE_RS03085	SM00358	Double-stranded RNA binding motif
CKBE_RS03085	SM00535	Ribonuclease III family
CKBE_RS03095	SM00838	Elongation factor G C-terminus
CKBE_RS03100	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CKBE_RS03105	SM00825	Beta-ketoacyl synthase
CKBE_RS03115	SM00822	CKBE_RS03115
CKBE_RS03120	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CKBE_RS03150	SM00363	S4 RNA-binding domain
CKBE_RS03155	SM00316	Ribosomal protein S1-like RNA-binding domain
CKBE_RS03175	SM00954	Region found in RelA / SpoT proteins
CKBE_RS03200	SM00478	endonuclease III
CKBE_RS03200	SM00525	CKBE_RS03200
CKBE_RS03220	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CKBE_RS03220	SM00292	breast cancer carboxy-terminal domain
CKBE_RS03220	SM00532	Ligase N family
CKBE_RS03230	SM00986	Uracil DNA glycosylase superfamily
CKBE_RS03230	SM00987	UreE urease accessory protein, C-terminal domain 
CKBE_RS03255	SM00487	DEAD-like helicases superfamily
CKBE_RS03255	SM00490	helicase superfamily c-terminal domain
CKBE_RS03255	SM00982	CKBE_RS03255
CKBE_RS03255	SM01058	CarD-like/TRCF domain
CKBE_RS03295	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CKBE_RS03300	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CKBE_RS03350	SM00829	Enoylreductase
CKBE_RS03365	SM00316	Ribosomal protein S1-like RNA-binding domain
CKBE_RS03365	SM00322	K homology RNA-binding domain
CKBE_RS03370	SM01387	CKBE_RS03370
CKBE_RS03405	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03415	SM00843	CKBE_RS03415
CKBE_RS03425	SM00463	Small MutS-related domain
CKBE_RS03440	SM00271	DnaJ molecular chaperone homology domain
CKBE_RS03505	SM00487	DEAD-like helicases superfamily
CKBE_RS03505	SM00490	helicase superfamily c-terminal domain
CKBE_RS03530	SM00798	AICARFT/IMPCHase bienzyme
CKBE_RS03530	SM00851	MGS-like domain
CKBE_RS03540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CKBE_RS03545	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03570	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03590	SM00903	Flavin reductase like domain
CKBE_RS03605	SM00853	MutL C terminal dimerisation domain
CKBE_RS03605	SM01340	CKBE_RS03605
CKBE_RS03650	SM00563	Phosphate acyltransferases
CKBE_RS03655	SM00957	SecA DEAD-like domain
CKBE_RS03655	SM00958	SecA preprotein cross-linking domain
CKBE_RS03670	SM00864	Tubulin/FtsZ family, GTPase domain
CKBE_RS03670	SM00865	Tubulin/FtsZ family, C-terminal domain
CKBE_RS03710	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03750	SM00316	Ribosomal protein S1-like RNA-binding domain
CKBE_RS03755	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03760	SM00481	DNA polymerase alpha chain like domain
CKBE_RS03790	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03800	SM00382	ATPases associated with a variety of cellular activities
CKBE_RS03800	SM01086	C-terminal, D2-small domain, of ClpB protein
CKBE_RS03825	SM00465	GIY-YIG type nucleases (URI domain)
