locus-tag	class	description
SOPEG_RS00005	COG0445	tRNA wobble uridine modification
SOPEG_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
SOPEG_RS00015	COG3312	ion transport
SOPEG_RS00020	COG0356	it plays a direct role in the translocation of protons across the membrane
SOPEG_RS00030	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SOPEG_RS00035	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SOPEG_RS00040	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
SOPEG_RS00045	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
SOPEG_RS00050	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
SOPEG_RS00055	COG0355	proton-transporting ATP synthase activity, rotational mechanism
SOPEG_RS00060	COG3328	transposase activity
SOPEG_RS00065	COG4584	PFAM Integrase catalytic
SOPEG_RS00080	COG3328	transposase activity
SOPEG_RS00085	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SOPEG_RS00090	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SOPEG_RS00150	COG3328	transposase activity
SOPEG_RS00165	COG1783	phage Terminase large subunit
SOPEG_RS00260	COG1484	DNA-dependent DNA replication
SOPEG_RS00265	COG4584	PFAM Integrase catalytic
SOPEG_RS00270	COG3328	transposase activity
SOPEG_RS00275	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SOPEG_RS00300	COG3772	lysozyme
SOPEG_RS00315	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SOPEG_RS00315	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SOPEG_RS00330	COG3036	rescue of stalled ribosome
SOPEG_RS00350	COG3328	transposase activity
SOPEG_RS00355	COG3328	transposase activity
SOPEG_RS00375	COG0203	ribosomal protein L17
SOPEG_RS00385	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
SOPEG_RS00390	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
SOPEG_RS00395	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SOPEG_RS00400	COG0201	protein transport
SOPEG_RS00405	COG0200	Binds to the 23S rRNA
SOPEG_RS00410	COG1841	ribosomal large subunit assembly
SOPEG_RS00415	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
SOPEG_RS00420	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
SOPEG_RS00425	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SOPEG_RS00430	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SOPEG_RS00435	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
SOPEG_RS00440	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SOPEG_RS00445	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
SOPEG_RS00450	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SOPEG_RS00455	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
SOPEG_RS00460	COG0255	Belongs to the universal ribosomal protein uL29 family
SOPEG_RS00465	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
SOPEG_RS00470	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SOPEG_RS00475	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
SOPEG_RS00480	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
SOPEG_RS00485	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SOPEG_RS00490	COG0089	rRNA binding
SOPEG_RS00495	COG0088	Forms part of the polypeptide exit tunnel
SOPEG_RS00500	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SOPEG_RS00505	COG0051	transcription antitermination factor activity, RNA binding
SOPEG_RS00535	COG2390	Transcriptional regulator
SOPEG_RS00535	COG4584	PFAM Integrase catalytic
SOPEG_RS00550	COG3423	Transcriptional regulator
SOPEG_RS00580	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
SOPEG_RS00585	COG3117	lipopolysaccharide transmembrane transporter activity
SOPEG_RS00590	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
SOPEG_RS00595	COG1137	ATPase activity
SOPEG_RS00605	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SOPEG_RS00615	COG1660	Displays ATPase and GTPase activities
SOPEG_RS00620	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS00630	COG3328	transposase activity
SOPEG_RS00635	COG3328	transposase activity
SOPEG_RS00650	COG4584	PFAM Integrase catalytic
SOPEG_RS00660	COG1484	DNA-dependent DNA replication
SOPEG_RS00685	COG5301	cellulose 1,4-beta-cellobiosidase activity
SOPEG_RS00765	COG3328	transposase activity
SOPEG_RS00770	COG3328	transposase activity
SOPEG_RS00785	COG3328	transposase activity
SOPEG_RS00830	COG0517	IMP dehydrogenase activity
SOPEG_RS00830	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
SOPEG_RS00835	COG0530	calcium, potassium:sodium antiporter activity
SOPEG_RS00840	COG1127	ABC transporter
SOPEG_RS00845	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
SOPEG_RS00850	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
SOPEG_RS00855	COG2854	intermembrane phospholipid transfer
SOPEG_RS00860	COG3113	response to antibiotic
SOPEG_RS00865	COG5007	Belongs to the BolA IbaG family
SOPEG_RS00870	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SOPEG_RS00880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SOPEG_RS00885	COG3105	Protein conserved in bacteria
SOPEG_RS00890	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
SOPEG_RS00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SOPEG_RS00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SOPEG_RS00905	COG0625	glutathione transferase activity
SOPEG_RS00910	COG2969	positive regulation of protein catabolic process
SOPEG_RS00915	COG0493	'glutamate synthase
SOPEG_RS00930	COG0784	Response regulator, receiver
SOPEG_RS00930	COG2198	Histidine kinase
SOPEG_RS00930	COG5002	protein histidine kinase activity
SOPEG_RS00935	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
SOPEG_RS00945	COG2823	Periplasmic or secreted lipoprotein
SOPEG_RS00950	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
SOPEG_RS00960	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SOPEG_RS00965	COG1741	Belongs to the pirin family
SOPEG_RS00970	COG0583	DNA-binding transcription factor activity
SOPEG_RS00975	COG0435	Glutathione S-transferase
SOPEG_RS00980	COG2259	Doxx family
SOPEG_RS00985	COG1309	transcriptional regulator
SOPEG_RS00995	COG3328	transposase activity
SOPEG_RS01000	COG3328	transposase activity
SOPEG_RS01010	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
SOPEG_RS01015	COG4575	ribosome binding
SOPEG_RS01020	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SOPEG_RS01025	COG0586	Pfam SNARE associated Golgi protein
SOPEG_RS01040	COG3328	transposase activity
SOPEG_RS01045	COG1484	DNA-dependent DNA replication
SOPEG_RS01050	COG4584	PFAM Integrase catalytic
SOPEG_RS01120	COG3787	Belongs to the UPF0306 family
SOPEG_RS01140	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SOPEG_RS01140	COG2755	lipolytic protein G-D-S-L family
SOPEG_RS01165	COG2271	Major facilitator Superfamily
SOPEG_RS01170	COG1904	glucuronate isomerase
SOPEG_RS01180	COG3423	Transcriptional regulator
SOPEG_RS01190	COG2842	Transposition protein
SOPEG_RS01215	COG1484	DNA-dependent DNA replication
SOPEG_RS01220	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SOPEG_RS01225	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SOPEG_RS01230	COG0049	tRNA binding
SOPEG_RS01235	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
SOPEG_RS01240	COG2168	tRNA wobble position uridine thiolation
SOPEG_RS01245	COG2923	Belongs to the DsrF TusC family
SOPEG_RS01250	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
SOPEG_RS01260	COG0545	Peptidyl-prolyl cis-trans isomerase
SOPEG_RS01265	COG2900	Belongs to the SlyX family
SOPEG_RS01270	COG1047	Peptidyl-prolyl cis-trans
SOPEG_RS01285	COG2249	NAD(P)H dehydrogenase (quinone) activity
SOPEG_RS01290	COG0488	(ABC) transporter
SOPEG_RS01295	COG3954	Phosphoribulokinase
SOPEG_RS01315	COG1484	DNA-dependent DNA replication
SOPEG_RS01340	COG3328	transposase activity
SOPEG_RS01350	COG0738	Major facilitator superfamily
SOPEG_RS01380	COG0546	phosphoglycolate phosphatase activity
SOPEG_RS01385	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SOPEG_RS01400	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SOPEG_RS01405	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SOPEG_RS01435	COG0494	nUDIX hydrolase
SOPEG_RS01450	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SOPEG_RS01455	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
SOPEG_RS01460	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
SOPEG_RS01475	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SOPEG_RS01480	COG2183	response to ionizing radiation
SOPEG_RS01485	COG1918	ferrous iron import across plasma membrane
SOPEG_RS01490	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
SOPEG_RS01505	COG2267	carboxylic ester hydrolase activity
SOPEG_RS01510	COG1040	competence protein
SOPEG_RS01515	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
SOPEG_RS01515	COG0316	Belongs to the HesB IscA family
SOPEG_RS01520	COG1640	4-alpha-glucanotransferase
SOPEG_RS01525	COG0058	SHG alpha-glucan phosphorylase activity
SOPEG_RS01530	COG1349	DNA-binding transcription factor activity
SOPEG_RS01535	COG0705	Rhomboid family
SOPEG_RS01540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SOPEG_RS01550	COG0058	SHG alpha-glucan phosphorylase activity
SOPEG_RS01560	COG0058	SHG alpha-glucan phosphorylase activity
SOPEG_RS01590	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SOPEG_RS01595	COG2095	MarC family integral membrane protein
SOPEG_RS01600	COG2610	gluconate transmembrane transporter activity
SOPEG_RS01605	COG1609	Transcriptional regulator
SOPEG_RS01635	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
SOPEG_RS01640	COG2050	protein possibly involved in aromatic compounds catabolism
SOPEG_RS01650	COG3180	Ammonia monooxygenase
SOPEG_RS01655	COG0598	Magnesium transport protein CorA
SOPEG_RS01660	COG0210	DNA helicase
SOPEG_RS01670	COG1011	Hydrolase
SOPEG_RS01685	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
SOPEG_RS01690	COG5567	small periplasmic lipoprotein
SOPEG_RS01700	COG0181	hydroxymethylbilane synthase activity
SOPEG_RS01710	COG2959	enzyme of heme biosynthesis
SOPEG_RS01715	COG3071	HemY protein
SOPEG_RS01720	COG0179	Fumarylacetoacetate (FAA) hydrolase
SOPEG_RS01760	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SOPEG_RS01760	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SOPEG_RS01760	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS01775	COG4584	PFAM Integrase catalytic
SOPEG_RS01785	COG1484	DNA-dependent DNA replication
SOPEG_RS01790	COG3328	transposase activity
SOPEG_RS01795	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SOPEG_RS01800	COG0009	L-threonylcarbamoyladenylate synthase
SOPEG_RS01805	COG0551	DNA topoisomerase type I activity
SOPEG_RS01810	COG2922	Belongs to the Smg family
SOPEG_RS01820	COG0242	peptide deformylase activity
SOPEG_RS01825	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SOPEG_RS01835	COG3328	transposase activity
SOPEG_RS01845	COG0581	inorganic phosphate transmembrane transporter activity
SOPEG_RS01855	COG0494	nUDIX hydrolase
SOPEG_RS01875	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SOPEG_RS01905	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
SOPEG_RS01915	COG2244	polysaccharide biosynthetic process
SOPEG_RS01920	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SOPEG_RS01925	COG0456	acetyltransferase
SOPEG_RS01930	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SOPEG_RS01935	COG1088	dTDP-glucose 4,6-dehydratase activity
SOPEG_RS01940	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
SOPEG_RS01945	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SOPEG_RS01950	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SOPEG_RS01955	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SOPEG_RS01960	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SOPEG_RS01965	COG3118	belongs to the thioredoxin family
SOPEG_RS01970	COG0513	Belongs to the DEAD box helicase family
SOPEG_RS01975	COG0248	Ppx GppA phosphatase
SOPEG_RS01980	COG0210	DNA helicase
SOPEG_RS01985	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
SOPEG_RS01990	COG0583	DNA-binding transcription factor activity
SOPEG_RS02000	COG0129	dihydroxy-acid dehydratase activity
SOPEG_RS02005	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SOPEG_RS02010	COG3978	acetolactate synthase activity
SOPEG_RS02020	COG3328	transposase activity
SOPEG_RS02070	COG1677	Flagellar hook-basal body complex protein FliE
SOPEG_RS02085	COG1317	bacterial-type flagellum organization
SOPEG_RS02110	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SOPEG_RS02145	COG3951	Flagellar rod assembly protein muramidase FlgJ
SOPEG_RS02145	COG1705	Flagellar rod assembly protein muramidase FlgJ
SOPEG_RS02150	COG1706	bacterial-type flagellum-dependent cell motility
SOPEG_RS02170	COG1749	Flagellar hook protein flgE
SOPEG_RS02175	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
SOPEG_RS02205	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SOPEG_RS02220	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
SOPEG_RS02275	COG0601	transmembrane transport
SOPEG_RS02280	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SOPEG_RS02285	COG0444	Belongs to the ABC transporter superfamily
SOPEG_RS02335	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
SOPEG_RS02340	COG2181	nitrate reductase activity
SOPEG_RS02355	COG2181	nitrate reductase activity
SOPEG_RS02370	COG3328	transposase activity
SOPEG_RS02375	COG2181	nitrate reductase activity
SOPEG_RS02390	COG0457	Tetratricopeptide repeat
SOPEG_RS02435	COG3328	transposase activity
SOPEG_RS02455	COG3328	transposase activity
SOPEG_RS02480	COG0588	phosphoglycerate mutase activity
SOPEG_RS02495	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SOPEG_RS02500	COG1119	ATPase activity
SOPEG_RS02515	COG1181	Belongs to the D-alanine--D-alanine ligase family
SOPEG_RS02525	COG2706	6-phosphogluconolactonase activity
SOPEG_RS02545	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
SOPEG_RS02550	COG0156	8-amino-7-oxononanoate synthase activity
SOPEG_RS02575	COG0556	nucleotide-excision repair
SOPEG_RS02580	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SOPEG_RS02595	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
SOPEG_RS02600	COG0314	molybdopterin synthase activity
SOPEG_RS02605	COG0670	Belongs to the BI1 family
SOPEG_RS02620	COG0513	Belongs to the DEAD box helicase family
SOPEG_RS02635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SOPEG_RS02645	COG4597	amino acid ABC transporter
SOPEG_RS02650	COG0765	amino acid transport
SOPEG_RS02680	COG1484	DNA-dependent DNA replication
SOPEG_RS02690	COG2814	Major facilitator Superfamily
SOPEG_RS02730	COG1174	glycine betaine transport
SOPEG_RS02740	COG1174	glycine betaine transport
SOPEG_RS02785	COG4584	PFAM Integrase catalytic
SOPEG_RS02790	COG1484	DNA-dependent DNA replication
SOPEG_RS02810	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SOPEG_RS02815	COG0783	Belongs to the Dps family
SOPEG_RS02820	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
SOPEG_RS02825	COG0488	(ABC) transporter
SOPEG_RS02865	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SOPEG_RS02870	COG1484	DNA-dependent DNA replication
SOPEG_RS02875	COG2390	Transcriptional regulator
SOPEG_RS02875	COG4584	PFAM Integrase catalytic
SOPEG_RS02880	COG4584	PFAM Integrase catalytic
SOPEG_RS02890	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SOPEG_RS02895	COG2133	pyrroloquinoline quinone binding
SOPEG_RS02905	COG3328	transposase activity
SOPEG_RS02925	COG1686	Belongs to the peptidase S11 family
SOPEG_RS02965	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SOPEG_RS02970	COG3842	ATPase activity
SOPEG_RS02975	COG1176	ABC-type spermidine putrescine transport system, permease component I
SOPEG_RS02980	COG1177	transmembrane transport
SOPEG_RS02995	COG4160	amino acid transport
SOPEG_RS03005	COG3328	transposase activity
SOPEG_RS03175	COG3328	transposase activity
SOPEG_RS03250	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SOPEG_RS03280	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
SOPEG_RS03305	COG4122	O-methyltransferase activity
SOPEG_RS03340	COG3328	transposase activity
SOPEG_RS03345	COG1484	DNA-dependent DNA replication
SOPEG_RS03350	COG4584	PFAM Integrase catalytic
SOPEG_RS03385	COG3916	Acyl-homoserine-lactone synthase
SOPEG_RS03390	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS03395	COG3328	transposase activity
SOPEG_RS03400	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS03410	COG4584	PFAM Integrase catalytic
SOPEG_RS03415	COG0848	biopolymer transport protein
SOPEG_RS03450	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SOPEG_RS03460	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
SOPEG_RS03475	COG3328	transposase activity
SOPEG_RS03525	COG0367	asparagine synthase
SOPEG_RS03530	COG1940	carbohydrate kinase activity
SOPEG_RS03530	COG1846	Transcriptional regulator
SOPEG_RS03535	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SOPEG_RS03545	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SOPEG_RS03545	COG1263	PTS System
SOPEG_RS03545	COG2190	(PTS) system
SOPEG_RS03550	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
SOPEG_RS03565	COG0735	belongs to the Fur family
SOPEG_RS03570	COG0716	FMN binding
SOPEG_RS03585	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
SOPEG_RS03595	COG3272	Protein of unknown function (DUF1722)
SOPEG_RS03605	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SOPEG_RS03610	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SOPEG_RS03615	COG1984	allophanate hydrolase subunit 2
SOPEG_RS03630	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
SOPEG_RS03635	COG1053	succinate dehydrogenase
SOPEG_RS03640	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SOPEG_RS03645	COG0567	Dehydrogenase, E1 component
SOPEG_RS03650	COG0508	dehydrogenase complex catalyzes the overall conversion of
SOPEG_RS03655	COG0045	succinate-CoA ligase (ADP-forming) activity
SOPEG_RS03660	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SOPEG_RS03665	COG3328	transposase activity
SOPEG_RS03670	COG1271	oxidase subunit
SOPEG_RS03675	COG1294	oxidase, subunit
SOPEG_RS03680	COG3790	cyd operon protein YbgE
SOPEG_RS03690	COG0811	peptide transport
SOPEG_RS03695	COG0848	biopolymer transport protein
SOPEG_RS03700	COG3064	Membrane
SOPEG_RS03700	COG3064	Membrane
SOPEG_RS03705	COG0823	Involved in the tonB-independent uptake of proteins
SOPEG_RS03710	COG2885	chlorophyll binding
SOPEG_RS03715	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
SOPEG_RS03725	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
SOPEG_RS03740	COG3328	transposase activity
SOPEG_RS03785	COG2149	membrane
SOPEG_RS03790	COG4584	PFAM Integrase catalytic
SOPEG_RS03795	COG2390	Transcriptional regulator
SOPEG_RS03795	COG4584	PFAM Integrase catalytic
SOPEG_RS03800	COG1484	DNA-dependent DNA replication
SOPEG_RS03810	COG5464	transposase or invertase
SOPEG_RS03815	COG3328	transposase activity
SOPEG_RS03820	COG3328	transposase activity
SOPEG_RS03825	COG0582	viral genome integration into host DNA
SOPEG_RS03835	COG1309	transcriptional regulator
SOPEG_RS03840	COG4232	protein-disulfide reductase activity
SOPEG_RS03845	COG1027	Aspartate ammonia-lyase
SOPEG_RS03860	COG3030	protein affecting phage T7 exclusion by the F plasmid
SOPEG_RS03865	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
SOPEG_RS03870	COG0459	protein refolding
SOPEG_RS03885	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
SOPEG_RS03890	COG3328	transposase activity
SOPEG_RS03900	COG3328	transposase activity
SOPEG_RS03930	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SOPEG_RS03935	COG1605	Chorismate mutase
SOPEG_RS03935	COG0287	Prephenate dehydrogenase
SOPEG_RS03940	COG1605	Chorismate mutase
SOPEG_RS03940	COG0077	Prephenate dehydratase
SOPEG_RS03945	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SOPEG_RS03950	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS03955	COG0564	pseudouridine synthase activity
SOPEG_RS03965	COG0542	response to heat
SOPEG_RS03975	COG3328	transposase activity
SOPEG_RS03980	COG3328	transposase activity
SOPEG_RS04000	COG0741	lytic transglycosylase activity
SOPEG_RS04000	COG1388	LysM domain
SOPEG_RS04005	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SOPEG_RS04010	COG2226	methyltransferase
SOPEG_RS04015	COG0328	RNA-DNA hybrid ribonuclease activity
SOPEG_RS04020	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SOPEG_RS04055	COG3328	transposase activity
SOPEG_RS04060	COG4584	PFAM Integrase catalytic
SOPEG_RS04065	COG2353	YceI-like domain
SOPEG_RS04070	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
SOPEG_RS04075	COG0121	glutamine amidotransferase
SOPEG_RS04090	COG1172	Belongs to the binding-protein-dependent transport system permease family
SOPEG_RS04115	COG4584	PFAM Integrase catalytic
SOPEG_RS04120	COG1484	DNA-dependent DNA replication
SOPEG_RS04145	COG3328	transposase activity
SOPEG_RS04170	COG1388	LysM domain
SOPEG_RS04170	COG1470	cell adhesion involved in biofilm formation
SOPEG_RS04190	COG3328	transposase activity
SOPEG_RS04200	COG3328	transposase activity
SOPEG_RS04225	COG4584	PFAM Integrase catalytic
SOPEG_RS04240	COG3328	transposase activity
SOPEG_RS04255	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
SOPEG_RS04260	COG2195	Cleaves the N-terminal amino acid of tripeptides
SOPEG_RS04265	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SOPEG_RS04275	COG4584	PFAM Integrase catalytic
SOPEG_RS04280	COG3328	transposase activity
SOPEG_RS04285	COG3328	transposase activity
SOPEG_RS04295	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SOPEG_RS04300	COG2223	nitrite transmembrane transporter activity
SOPEG_RS04310	COG2223	nitrite transmembrane transporter activity
SOPEG_RS04320	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SOPEG_RS04345	COG2974	May be involved in recombination
SOPEG_RS04375	COG4584	PFAM Integrase catalytic
SOPEG_RS04380	COG1484	DNA-dependent DNA replication
SOPEG_RS04385	COG0420	3'-5' exonuclease activity
SOPEG_RS04390	COG3328	transposase activity
SOPEG_RS04395	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS04400	COG5002	protein histidine kinase activity
SOPEG_RS04415	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SOPEG_RS04435	COG0450	alkyl hydroperoxide reductase
SOPEG_RS04450	COG3328	transposase activity
SOPEG_RS04485	COG4948	Mandelate Racemase Muconate Lactonizing
SOPEG_RS04520	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SOPEG_RS04545	COG3328	transposase activity
SOPEG_RS04550	COG1484	DNA-dependent DNA replication
SOPEG_RS04555	COG4584	PFAM Integrase catalytic
SOPEG_RS04565	COG3328	transposase activity
SOPEG_RS04575	COG3328	transposase activity
SOPEG_RS04585	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
SOPEG_RS04590	COG1309	transcriptional regulator
SOPEG_RS04595	COG0756	dUTP diphosphatase activity
SOPEG_RS04600	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SOPEG_RS04610	COG0227	Belongs to the bacterial ribosomal protein bL28 family
SOPEG_RS04615	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SOPEG_RS04620	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
SOPEG_RS04625	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SOPEG_RS04635	COG1519	Transferase
SOPEG_RS04640	COG0438	transferase activity, transferring glycosyl groups
SOPEG_RS04650	COG4584	PFAM Integrase catalytic
SOPEG_RS04660	COG1484	DNA-dependent DNA replication
SOPEG_RS04665	COG1216	Glycosyl transferase, family 2
SOPEG_RS04670	COG0438	transferase activity, transferring glycosyl groups
SOPEG_RS04695	COG0859	PFAM glycosyl transferase family 9
SOPEG_RS04705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SOPEG_RS04715	COG0438	transferase activity, transferring glycosyl groups
SOPEG_RS04725	COG4942	peptidase
SOPEG_RS04730	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SOPEG_RS04735	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SOPEG_RS04740	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
SOPEG_RS04745	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
SOPEG_RS04750	COG1045	serine acetyltransferase
SOPEG_RS04755	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
SOPEG_RS04760	COG2205	protein histidine kinase activity
SOPEG_RS04765	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS04770	COG3678	ATP-independent chaperone mediated protein folding
SOPEG_RS04815	COG0205	6-phosphofructokinase activity
SOPEG_RS04820	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
SOPEG_RS04825	COG0149	triose-phosphate isomerase activity
SOPEG_RS04840	COG2814	Major facilitator Superfamily
SOPEG_RS04860	COG3074	FtsZ-dependent cytokinesis
SOPEG_RS04875	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
SOPEG_RS04880	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
SOPEG_RS04885	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SOPEG_RS04895	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SOPEG_RS04900	COG0254	rRNA binding
SOPEG_RS04915	COG1484	DNA-dependent DNA replication
SOPEG_RS04920	COG4584	PFAM Integrase catalytic
SOPEG_RS04950	COG3112	Uncharacterised protein family (UPF0231)
SOPEG_RS04985	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SOPEG_RS05020	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
SOPEG_RS05025	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
SOPEG_RS05030	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
SOPEG_RS05045	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SOPEG_RS05050	COG0617	tRNA 3'-terminal CCA addition
SOPEG_RS05065	COG1489	DNA binding
SOPEG_RS05080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SOPEG_RS05115	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SOPEG_RS05140	COG1024	Enoyl-CoA hydratase
SOPEG_RS05150	COG4584	PFAM Integrase catalytic
SOPEG_RS05155	COG1484	DNA-dependent DNA replication
SOPEG_RS05175	COG3328	transposase activity
SOPEG_RS05185	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SOPEG_RS05200	COG3328	transposase activity
SOPEG_RS05220	COG3328	transposase activity
SOPEG_RS05230	COG1120	ATPase activity
SOPEG_RS05245	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SOPEG_RS05250	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
SOPEG_RS05260	COG4584	PFAM Integrase catalytic
SOPEG_RS05270	COG0316	Belongs to the HesB IscA family
SOPEG_RS05275	COG2860	membrane
SOPEG_RS05285	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SOPEG_RS05290	COG0232	Belongs to the dGTPase family. Type 2 subfamily
SOPEG_RS05295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SOPEG_RS05310	COG3328	transposase activity
SOPEG_RS05320	COG0667	Aldo Keto reductase
SOPEG_RS05325	COG2207	Transcriptional regulator
SOPEG_RS05330	COG2721	sulfolactate sulfo-lyase activity
SOPEG_RS05335	COG2271	Major facilitator Superfamily
SOPEG_RS05345	COG2084	Dehydrogenase
SOPEG_RS05365	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SOPEG_RS05370	COG3956	TIGRFAM MazG family protein
SOPEG_RS05375	COG0504	CTP synthase activity
SOPEG_RS05380	COG0148	phosphopyruvate hydratase activity
SOPEG_RS05385	COG0602	queuosine metabolic process
SOPEG_RS05395	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
SOPEG_RS05400	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SOPEG_RS05405	COG0175	sulfate reduction
SOPEG_RS05410	COG2234	aminopeptidase activity
SOPEG_RS05415	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
SOPEG_RS05415	COG1648	precorrin-2 dehydrogenase activity
SOPEG_RS05420	COG0175	sulfate reduction
SOPEG_RS05425	COG2895	sulfate adenylyltransferase (ATP) activity
SOPEG_RS05440	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
SOPEG_RS05445	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
SOPEG_RS05450	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
SOPEG_RS05460	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
SOPEG_RS05465	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
SOPEG_RS05470	COG1388	LysM domain
SOPEG_RS05470	COG4942	peptidase
SOPEG_RS05475	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SOPEG_RS05480	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SOPEG_RS05485	COG0582	viral genome integration into host DNA
SOPEG_RS05500	COG3328	transposase activity
SOPEG_RS05520	COG3328	transposase activity
SOPEG_RS05560	COG3328	transposase activity
SOPEG_RS05570	COG3328	transposase activity
SOPEG_RS05585	COG0765	amino acid transport
SOPEG_RS05600	COG0765	amino acid transport
SOPEG_RS05605	COG3328	transposase activity
SOPEG_RS05615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SOPEG_RS05620	COG1546	Belongs to the CinA family
SOPEG_RS05635	COG2137	regulation of response to DNA damage stimulus
SOPEG_RS05640	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SOPEG_RS05645	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
SOPEG_RS05665	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SOPEG_RS05670	COG2918	glutathione biosynthetic process
SOPEG_RS05685	COG4137	Cytochrome C assembly protein
SOPEG_RS05690	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SOPEG_RS05695	COG0228	four-way junction DNA binding
SOPEG_RS05700	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SOPEG_RS05705	COG0336	Belongs to the RNA methyltransferase TrmD family
SOPEG_RS05710	COG0335	large ribosomal subunit rRNA binding
SOPEG_RS05720	COG3328	transposase activity
SOPEG_RS05725	COG0582	viral genome integration into host DNA
SOPEG_RS05735	COG1309	transcriptional regulator
SOPEG_RS05740	COG4232	protein-disulfide reductase activity
SOPEG_RS05745	COG1324	tolerance protein
SOPEG_RS05750	COG1027	Aspartate ammonia-lyase
SOPEG_RS05765	COG3030	protein affecting phage T7 exclusion by the F plasmid
SOPEG_RS05770	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
SOPEG_RS05775	COG0459	protein refolding
SOPEG_RS05790	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
SOPEG_RS05795	COG3328	transposase activity
SOPEG_RS05845	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
SOPEG_RS05850	COG1162	GTPase activity
SOPEG_RS05855	COG0688	phosphatidylethanolamine metabolic process
SOPEG_RS05860	COG1511	domain protein
SOPEG_RS05860	COG3264	Mechanosensitive ion channel
SOPEG_RS05865	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
SOPEG_RS05870	COG3328	transposase activity
SOPEG_RS05920	COG0697	spore germination
SOPEG_RS05925	COG3423	Transcriptional regulator
SOPEG_RS06010	COG3023	N-Acetylmuramoyl-L-alanine amidase
SOPEG_RS06025	COG4584	PFAM Integrase catalytic
SOPEG_RS06030	COG1484	DNA-dependent DNA replication
SOPEG_RS06035	COG1560	Kdo2-lipid A biosynthetic process
SOPEG_RS06055	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SOPEG_RS06060	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
SOPEG_RS06065	COG0321	lipoyl(octanoyl) transferase activity
SOPEG_RS06070	COG2921	Belongs to the UPF0250 family
SOPEG_RS06075	COG1686	Belongs to the peptidase S11 family
SOPEG_RS06080	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SOPEG_RS06085	COG0772	Belongs to the SEDS family
SOPEG_RS06090	COG0768	penicillin binding
SOPEG_RS06095	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
SOPEG_RS06100	COG0799	negative regulation of ribosome biogenesis
SOPEG_RS06105	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
SOPEG_RS06110	COG1466	dna polymerase III delta subunit
SOPEG_RS06115	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
SOPEG_RS06120	COG0495	leucyl-tRNA aminoacylation
SOPEG_RS06125	COG2888	peptidyl-tyrosine sulfation
SOPEG_RS06130	COG1126	abc transporter atp-binding protein
SOPEG_RS06135	COG0765	amino acid transport
SOPEG_RS06140	COG0765	amino acid transport
SOPEG_RS06155	COG4584	PFAM Integrase catalytic
SOPEG_RS06160	COG1484	DNA-dependent DNA replication
SOPEG_RS06165	COG3328	transposase activity
SOPEG_RS06180	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
SOPEG_RS06195	COG0187	DNA topoisomerase II activity
SOPEG_RS06200	COG3150	esterase
SOPEG_RS06205	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
SOPEG_RS06210	COG3151	Protein conserved in bacteria
SOPEG_RS06215	COG0494	nUDIX hydrolase
SOPEG_RS06225	COG5463	Belongs to the UPF0441 family
SOPEG_RS06230	COG0754	glutathionylspermidine amidase activity
SOPEG_RS06245	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
SOPEG_RS06255	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
SOPEG_RS06255	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
SOPEG_RS06270	COG4991	sh3 domain protein
SOPEG_RS06275	COG0617	tRNA 3'-terminal CCA addition
SOPEG_RS06280	COG1968	undecaprenyl-diphosphatase activity
SOPEG_RS06285	COG3328	transposase activity
SOPEG_RS06295	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SOPEG_RS06300	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
SOPEG_RS06305	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
SOPEG_RS06310	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SOPEG_RS06315	COG0358	DNA primase activity
SOPEG_RS06385	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
SOPEG_RS06390	COG0583	DNA-binding transcription factor activity
SOPEG_RS06420	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SOPEG_RS06420	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
SOPEG_RS06425	COG0802	atpase or kinase
SOPEG_RS06435	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
SOPEG_RS06440	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
SOPEG_RS06445	COG1923	regulation of RNA biosynthetic process
SOPEG_RS06455	COG0330	HflC and HflK could
SOPEG_RS06460	COG0330	HflC and HflK could
SOPEG_RS06475	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
SOPEG_RS06480	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
SOPEG_RS06490	COG0557	exoribonuclease II activity
SOPEG_RS06495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SOPEG_RS06505	COG1073	alpha beta
SOPEG_RS06510	COG0360	Binds together with S18 to 16S ribosomal RNA
SOPEG_RS06520	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SOPEG_RS06525	COG0359	binds to the 23S rRNA
SOPEG_RS06535	COG1484	DNA-dependent DNA replication
SOPEG_RS06545	COG0545	Peptidyl-prolyl cis-trans isomerase
SOPEG_RS06555	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
SOPEG_RS06570	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SOPEG_RS06575	COG0729	surface antigen
SOPEG_RS06585	COG2105	PFAM AIG2 family protein
SOPEG_RS06600	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SOPEG_RS06610	COG1438	arginine binding
SOPEG_RS06625	COG3423	Transcriptional regulator
SOPEG_RS06635	COG0142	geranyltranstransferase activity
SOPEG_RS06640	COG0261	This protein binds to 23S rRNA in the presence of protein L20
SOPEG_RS06645	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SOPEG_RS06655	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
SOPEG_RS06680	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SOPEG_RS06685	COG1534	Rna-binding protein
SOPEG_RS06690	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
SOPEG_RS06695	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SOPEG_RS06700	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SOPEG_RS06705	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SOPEG_RS06715	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SOPEG_RS06730	COG0779	Required for maturation of 30S ribosomal subunits
SOPEG_RS06735	COG0195	Participates in both transcription termination and antitermination
SOPEG_RS06740	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
SOPEG_RS06745	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SOPEG_RS06750	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SOPEG_RS06755	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
SOPEG_RS06760	COG1185	polyribonucleotide nucleotidyltransferase activity
SOPEG_RS06785	COG1484	DNA-dependent DNA replication
SOPEG_RS06790	COG3328	transposase activity
SOPEG_RS06795	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
SOPEG_RS06805	COG0488	(ABC) transporter
SOPEG_RS06820	COG0560	Phosphoserine phosphatase
SOPEG_RS06825	COG3726	membrane protein affecting hemolysin expression
SOPEG_RS06835	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
SOPEG_RS06845	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
SOPEG_RS06850	COG0084	hydrolase, TatD family'
SOPEG_RS06870	COG2823	Periplasmic or secreted lipoprotein
SOPEG_RS06880	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
SOPEG_RS06885	COG0456	acetyltransferase
SOPEG_RS06890	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
SOPEG_RS06895	COG2813	Specifically methylates the guanine in position
SOPEG_RS06905	COG3706	GGDEF domain
SOPEG_RS06930	COG2827	Endonuclease containing a URI domain
SOPEG_RS06935	COG3153	acetyltransferase
SOPEG_RS06945	COG0826	peptidase U32
SOPEG_RS06955	COG4584	PFAM Integrase catalytic
SOPEG_RS06960	COG1484	DNA-dependent DNA replication
SOPEG_RS06965	COG3328	transposase activity
SOPEG_RS06970	COG0735	belongs to the Fur family
SOPEG_RS06980	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SOPEG_RS07005	COG0604	alcohol dehydrogenase
SOPEG_RS07015	COG1448	Aminotransferase
SOPEG_RS07020	COG3328	transposase activity
SOPEG_RS07040	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SOPEG_RS07045	COG0629	single-stranded DNA binding
SOPEG_RS07070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SOPEG_RS07085	COG3328	transposase activity
SOPEG_RS07095	COG0583	DNA-binding transcription factor activity
SOPEG_RS07100	COG1484	DNA-dependent DNA replication
SOPEG_RS07105	COG4584	PFAM Integrase catalytic
SOPEG_RS07120	COG0025	NhaP-type Na H and K H
SOPEG_RS07125	COG0583	DNA-binding transcription factor activity
SOPEG_RS07130	COG1380	Effector of murein hydrolase LrgA
SOPEG_RS07145	COG3162	membrane
SOPEG_RS07155	COG1301	dicarboxylic acid transport
SOPEG_RS07160	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SOPEG_RS07165	COG4584	PFAM Integrase catalytic
SOPEG_RS07175	COG3328	transposase activity
SOPEG_RS07180	COG3328	transposase activity
SOPEG_RS07195	COG3045	CreA protein
SOPEG_RS07200	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS07210	COG0083	homoserine kinase activity
SOPEG_RS07220	COG3022	response to hydroperoxide
SOPEG_RS07225	COG1115	amino acid carrier protein
SOPEG_RS07245	COG0443	Heat shock 70 kDa protein
SOPEG_RS07250	COG0484	heat shock protein binding
SOPEG_RS07255	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
SOPEG_RS07260	COG0268	Binds directly to 16S ribosomal RNA
SOPEG_RS07265	COG0196	riboflavin kinase activity
SOPEG_RS07270	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
SOPEG_RS07275	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
SOPEG_RS07285	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
SOPEG_RS07295	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
SOPEG_RS07305	COG0505	Belongs to the CarA family
SOPEG_RS07310	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
SOPEG_RS07315	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SOPEG_RS07320	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SOPEG_RS07325	COG2967	ApaG domain
SOPEG_RS07330	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
SOPEG_RS07335	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
SOPEG_RS07340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SOPEG_RS07345	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SOPEG_RS07350	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
SOPEG_RS07360	COG0564	pseudouridine synthase activity
SOPEG_RS07380	COG1484	DNA-dependent DNA replication
SOPEG_RS07390	COG3328	transposase activity
SOPEG_RS07395	COG1484	DNA-dependent DNA replication
SOPEG_RS07410	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
SOPEG_RS07415	COG4575	ribosome binding
SOPEG_RS07420	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SOPEG_RS07425	COG0586	Pfam SNARE associated Golgi protein
SOPEG_RS07470	COG1904	glucuronate isomerase
SOPEG_RS07475	COG0246	Mannitol dehydrogenase
SOPEG_RS07480	COG2721	sulfolactate sulfo-lyase activity
SOPEG_RS07500	COG2813	Specifically methylates the guanine in position
SOPEG_RS07540	COG3328	transposase activity
SOPEG_RS07555	COG1560	Kdo2-lipid A biosynthetic process
SOPEG_RS07560	COG2814	Major facilitator Superfamily
SOPEG_RS07570	COG5645	(Lipo)protein
SOPEG_RS07585	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
SOPEG_RS07605	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS07620	COG3328	transposase activity
SOPEG_RS07625	COG3328	transposase activity
SOPEG_RS07680	COG3328	transposase activity
SOPEG_RS07710	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SOPEG_RS07725	COG0788	formyltetrahydrofolate deformylase activity
SOPEG_RS07735	COG0708	Exodeoxyribonuclease III
SOPEG_RS07750	COG0778	Nitroreductase
SOPEG_RS07755	COG0616	signal peptide processing
SOPEG_RS07760	COG0252	asparaginase activity
SOPEG_RS07770	COG3139	Protein of unknown function (DUF1315)
SOPEG_RS07775	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SOPEG_RS07790	COG0656	L-ascorbic acid biosynthetic process
SOPEG_RS07800	COG2766	serine protein kinase
SOPEG_RS07810	COG3263	regulation of cellular component size
SOPEG_RS07865	COG3328	transposase activity
SOPEG_RS07875	COG3328	transposase activity
SOPEG_RS07890	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS07895	COG1484	DNA-dependent DNA replication
SOPEG_RS07900	COG4584	PFAM Integrase catalytic
SOPEG_RS07905	COG1175	transmembrane transport
SOPEG_RS07910	COG0395	ABC-type sugar transport system, permease component
SOPEG_RS07920	COG3842	ATPase activity
SOPEG_RS07925	COG1653	transport
SOPEG_RS07940	COG2031	fatty acid transporter
SOPEG_RS07955	COG1309	transcriptional regulator
SOPEG_RS07980	COG2271	Major facilitator Superfamily
SOPEG_RS07995	COG3328	transposase activity
SOPEG_RS08010	COG4584	PFAM Integrase catalytic
SOPEG_RS08025	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SOPEG_RS08030	COG3328	transposase activity
SOPEG_RS08040	COG0113	porphobilinogen synthase activity
SOPEG_RS08055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SOPEG_RS08070	COG5001	Diguanylate cyclase
SOPEG_RS08070	COG3300	MHYT domain
SOPEG_RS08090	COG4558	Periplasmic binding protein
SOPEG_RS08095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SOPEG_RS08105	COG4221	oxidoreductase activity
SOPEG_RS08150	COG3328	transposase activity
SOPEG_RS08155	COG0604	alcohol dehydrogenase
SOPEG_RS08165	COG4584	PFAM Integrase catalytic
SOPEG_RS08165	COG2390	Transcriptional regulator
SOPEG_RS08170	COG4584	PFAM Integrase catalytic
SOPEG_RS08175	COG1309	transcriptional regulator
SOPEG_RS08190	COG1846	Transcriptional regulator
SOPEG_RS08195	COG1132	(ABC) transporter
SOPEG_RS08200	COG3328	transposase activity
SOPEG_RS08205	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SOPEG_RS08225	COG3328	transposase activity
SOPEG_RS08230	COG1484	DNA-dependent DNA replication
SOPEG_RS08235	COG4584	PFAM Integrase catalytic
SOPEG_RS08250	COG0477	Major facilitator Superfamily
SOPEG_RS08260	COG0477	Major facilitator Superfamily
SOPEG_RS08280	COG2271	Major facilitator Superfamily
SOPEG_RS08285	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SOPEG_RS08300	COG1414	Transcriptional regulator
SOPEG_RS08305	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SOPEG_RS08310	COG1116	anion transmembrane transporter activity
SOPEG_RS08315	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SOPEG_RS08320	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SOPEG_RS08360	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
SOPEG_RS08370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SOPEG_RS08390	COG1484	DNA-dependent DNA replication
SOPEG_RS08395	COG3328	transposase activity
SOPEG_RS08400	COG3328	transposase activity
SOPEG_RS08410	COG4584	PFAM Integrase catalytic
SOPEG_RS08455	COG2990	Protein conserved in bacteria
SOPEG_RS08465	COG1376	ErfK ybiS ycfS ynhG family protein
SOPEG_RS08470	COG0583	DNA-binding transcription factor activity
SOPEG_RS08485	COG3328	transposase activity
SOPEG_RS08500	COG0670	Belongs to the BI1 family
SOPEG_RS08505	COG2920	part of a sulfur-relay system
SOPEG_RS08510	COG1254	Belongs to the acylphosphatase family
SOPEG_RS08515	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SOPEG_RS08520	COG3785	DNA binding
SOPEG_RS08525	COG1832	CoA-binding protein
SOPEG_RS08540	COG3328	transposase activity
SOPEG_RS08545	COG0210	DNA helicase
SOPEG_RS08555	COG1289	transmembrane transporter activity
SOPEG_RS08560	COG1484	DNA-dependent DNA replication
SOPEG_RS08565	COG4584	PFAM Integrase catalytic
SOPEG_RS08575	COG3070	regulator of competence-specific genes
SOPEG_RS08610	COG3328	transposase activity
SOPEG_RS08620	COG1067	ATP-dependent peptidase activity
SOPEG_RS08625	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
SOPEG_RS08630	COG3009	Protein conserved in bacteria
SOPEG_RS08645	COG0488	(ABC) transporter
SOPEG_RS08650	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SOPEG_RS08650	COG0116	Belongs to the methyltransferase superfamily
SOPEG_RS08655	COG3217	Mosc domain protein beta barrel domain protein
SOPEG_RS08655	COG0633	Ferredoxin
SOPEG_RS08665	COG0167	dihydroorotate dehydrogenase activity
SOPEG_RS08670	COG0308	aminopeptidase N
SOPEG_RS08680	COG0017	Asparaginyl-tRNA synthetase
SOPEG_RS08725	COG2989	Protein conserved in bacteria
SOPEG_RS08795	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SOPEG_RS08810	COG2186	Transcriptional regulator
SOPEG_RS08815	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
SOPEG_RS08825	COG2983	Belongs to the UPF0260 family
SOPEG_RS08830	COG0179	Fumarylacetoacetate (FAA) hydrolase
SOPEG_RS08835	COG4584	PFAM Integrase catalytic
SOPEG_RS08840	COG1484	DNA-dependent DNA replication
SOPEG_RS08845	COG3328	transposase activity
SOPEG_RS08850	COG0179	Fumarylacetoacetate (FAA) hydrolase
SOPEG_RS08855	COG3100	YcgL domain-containing protein
SOPEG_RS08860	COG0850	regulation of cytokinetic process
SOPEG_RS08865	COG2894	cell division
SOPEG_RS08870	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
SOPEG_RS08880	COG3065	identical protein binding
SOPEG_RS08895	COG0251	oxidation-reduction process
SOPEG_RS08910	COG0494	nUDIX hydrolase
SOPEG_RS08915	COG1760	l-serine dehydratase
SOPEG_RS08920	COG3328	transposase activity
SOPEG_RS08925	COG1253	flavin adenine dinucleotide binding
SOPEG_RS08940	COG3715	PTS system
SOPEG_RS08960	COG1971	Probably functions as a manganese efflux pump
SOPEG_RS08975	COG3328	transposase activity
SOPEG_RS08980	COG3328	transposase activity
SOPEG_RS09000	COG3328	transposase activity
SOPEG_RS09005	COG4584	PFAM Integrase catalytic
SOPEG_RS09010	COG1484	DNA-dependent DNA replication
SOPEG_RS09020	COG3328	transposase activity
SOPEG_RS09055	COG1484	DNA-dependent DNA replication
SOPEG_RS09060	COG4584	PFAM Integrase catalytic
SOPEG_RS09085	COG2995	paraquat-inducible protein a
SOPEG_RS09090	COG1956	GAF domain-containing protein
SOPEG_RS09095	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
SOPEG_RS09105	COG0501	Belongs to the peptidase M48B family
SOPEG_RS09145	COG3328	transposase activity
SOPEG_RS09355	COG3328	transposase activity
SOPEG_RS09360	COG1192	Involved in chromosome partitioning
SOPEG_RS09370	COG3328	transposase activity
SOPEG_RS09390	COG4608	Belongs to the ABC transporter superfamily
SOPEG_RS09430	COG4584	PFAM Integrase catalytic
SOPEG_RS09435	COG1484	DNA-dependent DNA replication
SOPEG_RS09440	COG3328	transposase activity
SOPEG_RS09445	COG1505	serine-type exopeptidase activity
SOPEG_RS09455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SOPEG_RS09460	COG1472	Belongs to the glycosyl hydrolase 3 family
SOPEG_RS09465	COG1649	PFAM Uncharacterised BCR, COG1649
SOPEG_RS09470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SOPEG_RS09505	COG3328	transposase activity
SOPEG_RS09570	COG3328	transposase activity
SOPEG_RS09580	COG3328	transposase activity
SOPEG_RS09585	COG3328	transposase activity
SOPEG_RS09595	COG1276	copper resistance
SOPEG_RS09600	COG2372	response to copper ion
SOPEG_RS09635	COG2807	transmembrane transport
SOPEG_RS09640	COG2207	Transcriptional regulator
SOPEG_RS09650	COG3328	transposase activity
SOPEG_RS09705	COG3328	transposase activity
SOPEG_RS09750	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SOPEG_RS09755	COG0322	excinuclease ABC activity
SOPEG_RS09760	COG2197	response regulator
SOPEG_RS09790	COG3328	transposase activity
SOPEG_RS09895	COG3328	transposase activity
SOPEG_RS09910	COG3328	transposase activity
SOPEG_RS09930	COG4584	PFAM Integrase catalytic
SOPEG_RS09975	COG3328	transposase activity
SOPEG_RS10035	COG3328	transposase activity
SOPEG_RS10040	COG1484	DNA-dependent DNA replication
SOPEG_RS10060	COG3328	transposase activity
SOPEG_RS10075	COG3328	transposase activity
SOPEG_RS10095	COG3328	transposase activity
SOPEG_RS10100	COG1484	DNA-dependent DNA replication
SOPEG_RS10105	COG4584	PFAM Integrase catalytic
SOPEG_RS10135	COG3228	Belongs to the MtfA family
SOPEG_RS10175	COG1025	Belongs to the peptidase M16 family
SOPEG_RS10210	COG4584	PFAM Integrase catalytic
SOPEG_RS10215	COG1484	DNA-dependent DNA replication
SOPEG_RS10225	COG3328	transposase activity
SOPEG_RS10235	COG2223	nitrite transmembrane transporter activity
SOPEG_RS10245	COG2252	PERMEase
SOPEG_RS10265	COG2926	Belongs to the UPF0265 family
SOPEG_RS10275	COG2390	Transcriptional regulator
SOPEG_RS10275	COG4584	PFAM Integrase catalytic
SOPEG_RS10285	COG3328	transposase activity
SOPEG_RS10315	COG2925	Exonuclease
SOPEG_RS10340	COG3617	BRO family, N-terminal domain
SOPEG_RS10355	COG3328	transposase activity
SOPEG_RS10385	COG3328	transposase activity
SOPEG_RS10415	COG4584	PFAM Integrase catalytic
SOPEG_RS10420	COG1484	DNA-dependent DNA replication
SOPEG_RS10425	COG3328	transposase activity
SOPEG_RS10430	COG3328	transposase activity
SOPEG_RS10480	COG0438	transferase activity, transferring glycosyl groups
SOPEG_RS10490	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SOPEG_RS10505	COG4584	PFAM Integrase catalytic
SOPEG_RS10510	COG1484	DNA-dependent DNA replication
SOPEG_RS10515	COG3328	transposase activity
SOPEG_RS10540	COG2190	(PTS) system
SOPEG_RS10540	COG1263	PTS System
SOPEG_RS10540	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SOPEG_RS10545	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
SOPEG_RS10550	COG5544	Lipoprotein
SOPEG_RS10555	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SOPEG_RS10565	COG3148	PFAM DTW domain containing protein
SOPEG_RS10575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SOPEG_RS10580	COG1846	Transcriptional regulator
SOPEG_RS10585	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
SOPEG_RS10590	COG2814	Major facilitator Superfamily
SOPEG_RS10595	COG2113	Glycine betaine
SOPEG_RS10605	COG4176	ABC-type proline glycine betaine transport system permease component
SOPEG_RS10630	COG1780	Probably involved in ribonucleotide reductase function
SOPEG_RS10635	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SOPEG_RS10655	COG3328	transposase activity
SOPEG_RS10675	COG2842	Transposition protein
SOPEG_RS10690	COG3328	transposase activity
SOPEG_RS10700	COG0815	Transfers the fatty acyl group on membrane lipoproteins
SOPEG_RS10710	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
SOPEG_RS10715	COG1702	phosphate starvation-inducible protein PhoH
SOPEG_RS10720	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SOPEG_RS10725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SOPEG_RS10730	COG3328	transposase activity
SOPEG_RS10735	COG3328	transposase activity
SOPEG_RS10750	COG4974	Belongs to the 'phage' integrase family
SOPEG_RS10760	COG4160	amino acid transport
SOPEG_RS10770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SOPEG_RS10775	COG1126	abc transporter atp-binding protein
SOPEG_RS10785	COG3023	N-Acetylmuramoyl-L-alanine amidase
SOPEG_RS10795	COG0028	Belongs to the TPP enzyme family
SOPEG_RS10805	COG1278	Cold shock
SOPEG_RS10810	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
SOPEG_RS10815	COG0542	response to heat
SOPEG_RS10820	COG3328	transposase activity
SOPEG_RS10825	COG3328	transposase activity
SOPEG_RS10835	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
SOPEG_RS10840	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
SOPEG_RS10845	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SOPEG_RS10850	COG4988	ABC transporter
SOPEG_RS10855	COG0492	ferredoxin-NADP+ reductase activity
SOPEG_RS10865	COG1674	ftsk spoiiie
SOPEG_RS10865	COG3107	peptidoglycan biosynthetic process
SOPEG_RS10870	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
SOPEG_RS10880	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
SOPEG_RS10885	COG2814	Major facilitator Superfamily
SOPEG_RS10895	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SOPEG_RS10920	COG3328	transposase activity
SOPEG_RS10935	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
SOPEG_RS10940	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
SOPEG_RS10945	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SOPEG_RS10950	COG0539	negative regulation of cytoplasmic translation
SOPEG_RS10955	COG0776	regulation of translation
SOPEG_RS10965	COG0516	GMP reductase activity
SOPEG_RS10970	COG0237	dephospho-CoA kinase activity
SOPEG_RS10975	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
SOPEG_RS10980	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
SOPEG_RS10985	COG3328	transposase activity
SOPEG_RS10990	COG1484	DNA-dependent DNA replication
SOPEG_RS10995	COG4584	PFAM Integrase catalytic
SOPEG_RS11000	COG0494	nUDIX hydrolase
SOPEG_RS11005	COG0653	protein targeting
SOPEG_RS11020	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
SOPEG_RS11030	COG0849	cell division
SOPEG_RS11035	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SOPEG_RS11040	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SOPEG_RS11045	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SOPEG_RS11050	COG0772	Belongs to the SEDS family
SOPEG_RS11055	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
SOPEG_RS11060	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SOPEG_RS11065	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SOPEG_RS11070	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SOPEG_RS11075	COG0768	penicillin binding
SOPEG_RS11080	COG3116	cell division
SOPEG_RS11085	COG0275	rRNA processing
SOPEG_RS11090	COG2001	Belongs to the MraZ family
SOPEG_RS11095	COG1609	Transcriptional regulator
SOPEG_RS11115	COG0473	3-isopropylmalate dehydrogenase activity
SOPEG_RS11125	COG0066	3-isopropylmalate dehydratase activity
SOPEG_RS11145	COG3328	transposase activity
SOPEG_RS11240	COG1484	DNA-dependent DNA replication
SOPEG_RS11245	COG2390	Transcriptional regulator
SOPEG_RS11245	COG4584	PFAM Integrase catalytic
SOPEG_RS11255	COG3328	transposase activity
SOPEG_RS11280	COG0827	DNA restriction-modification system
SOPEG_RS11285	COG0827	DNA restriction-modification system
SOPEG_RS11295	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
SOPEG_RS11300	COG0540	Belongs to the ATCase OTCase family
SOPEG_RS11305	COG2731	YhcH YjgK YiaL family protein
SOPEG_RS11310	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SOPEG_RS11315	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
SOPEG_RS11320	COG3328	transposase activity
SOPEG_RS11335	COG2927	DNA polymerase III (CHI subunit)
SOPEG_RS11340	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
SOPEG_RS11345	COG0795	lipopolysaccharide-transporting ATPase activity
SOPEG_RS11350	COG0795	lipopolysaccharide-transporting ATPase activity
SOPEG_RS11360	COG0582	viral genome integration into host DNA
SOPEG_RS11420	COG3328	transposase activity
SOPEG_RS11425	COG1530	ribonuclease E activity
SOPEG_RS11430	COG0564	pseudouridine synthase activity
SOPEG_RS11440	COG1399	metal-binding, possibly nucleic acid-binding protein
SOPEG_RS11445	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SOPEG_RS11450	COG0416	fatty acid biosynthetic process
SOPEG_RS11455	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SOPEG_RS11460	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SOPEG_RS11465	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS11470	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SOPEG_RS11475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SOPEG_RS11480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SOPEG_RS11485	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SOPEG_RS11490	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SOPEG_RS11495	COG0470	DNA polymerase III
SOPEG_RS11500	COG0084	hydrolase, TatD family'
SOPEG_RS11510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SOPEG_RS11510	COG1263	PTS System
SOPEG_RS11600	COG3328	transposase activity
SOPEG_RS11610	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SOPEG_RS11615	COG3099	Belongs to the UPF0263 family
SOPEG_RS11645	COG0601	transmembrane transport
SOPEG_RS11720	COG2842	Transposition protein
SOPEG_RS11755	COG3328	transposase activity
SOPEG_RS11760	COG3328	transposase activity
SOPEG_RS11765	COG3328	transposase activity
SOPEG_RS11770	COG3328	transposase activity
SOPEG_RS11810	COG3328	transposase activity
SOPEG_RS11825	COG0537	adenosine 5'-monophosphoramidase activity
SOPEG_RS11830	COG5633	Lipoprotein
SOPEG_RS11835	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
SOPEG_RS11845	COG1484	DNA-dependent DNA replication
SOPEG_RS11850	COG4584	PFAM Integrase catalytic
SOPEG_RS12025	COG3291	Pkd domain containing protein
SOPEG_RS12030	COG3328	transposase activity
SOPEG_RS12060	COG2911	Protein conserved in bacteria
SOPEG_RS12065	COG2911	Protein conserved in bacteria
SOPEG_RS12070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
SOPEG_RS12075	COG1643	Atp-dependent helicase
SOPEG_RS12115	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
SOPEG_RS12120	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
SOPEG_RS12150	COG3328	transposase activity
SOPEG_RS12165	COG3678	ATP-independent chaperone mediated protein folding
SOPEG_RS12185	COG1484	DNA-dependent DNA replication
SOPEG_RS12195	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SOPEG_RS12200	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS12220	COG1309	transcriptional regulator
SOPEG_RS12225	COG1309	transcriptional regulator
SOPEG_RS12230	COG0753	catalase activity
SOPEG_RS12240	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS12255	COG3328	transposase activity
SOPEG_RS12260	COG0338	D12 class N6 adenine-specific DNA methyltransferase
SOPEG_RS12290	COG5301	cellulose 1,4-beta-cellobiosidase activity
SOPEG_RS12295	COG3328	transposase activity
SOPEG_RS12330	COG1252	NADH dehydrogenase
SOPEG_RS12340	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SOPEG_RS12345	COG4591	ABC-type transport system involved in lipoprotein release permease component
SOPEG_RS12350	COG1136	(ABC) transporter
SOPEG_RS12355	COG4591	ABC-type transport system involved in lipoprotein release permease component
SOPEG_RS12365	COG2195	Cleaves the N-terminal amino acid of tripeptides
SOPEG_RS12385	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SOPEG_RS12390	COG2915	High frequency lysogenization protein hflD homolog
SOPEG_RS12395	COG0482	sulfurtransferase activity
SOPEG_RS12410	COG3328	transposase activity
SOPEG_RS12445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SOPEG_RS12465	COG0137	argininosuccinate synthase activity
SOPEG_RS12485	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SOPEG_RS12500	COG1321	iron dependent repressor
SOPEG_RS12505	COG3328	transposase activity
SOPEG_RS12510	COG2814	Major facilitator Superfamily
SOPEG_RS12520	COG0114	fumarate hydratase activity
SOPEG_RS12525	COG1482	cell wall glycoprotein biosynthetic process
SOPEG_RS12535	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
SOPEG_RS12560	COG3328	transposase activity
SOPEG_RS12575	COG1879	ABC-type sugar transport system periplasmic component
SOPEG_RS12605	COG4657	Part of a membrane complex involved in electron transport
SOPEG_RS12610	COG2878	Part of a membrane complex involved in electron transport
SOPEG_RS12615	COG4656	Part of a membrane complex involved in electron transport
SOPEG_RS12620	COG4658	electron transport chain
SOPEG_RS12625	COG4659	FMN binding
SOPEG_RS12630	COG4660	Part of a membrane complex involved in electron transport
SOPEG_RS12635	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SOPEG_RS12640	COG3104	oligopeptide transport
SOPEG_RS12645	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
SOPEG_RS12650	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
SOPEG_RS12655	COG0259	pyridoxamine-phosphate oxidase activity
SOPEG_RS12660	COG3895	Periplasmic Protein
SOPEG_RS12675	COG1846	Transcriptional regulator
SOPEG_RS12680	COG0346	lactoylglutathione lyase activity
SOPEG_RS12685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SOPEG_RS12690	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
SOPEG_RS12705	COG1609	Transcriptional regulator
SOPEG_RS12715	COG0307	riboflavin synthase, alpha
SOPEG_RS12760	COG3328	transposase activity
SOPEG_RS12770	COG4584	PFAM Integrase catalytic
SOPEG_RS12780	COG2166	iron-sulfur cluster assembly
SOPEG_RS12785	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SOPEG_RS12790	COG0719	Fe-S assembly protein
SOPEG_RS12795	COG0396	ATPase activity
SOPEG_RS12800	COG0719	Fe-S assembly protein
SOPEG_RS12805	COG0316	Belongs to the HesB IscA family
SOPEG_RS12820	COG0247	lactate metabolic process
SOPEG_RS12820	COG0277	FAD linked oxidase domain protein
SOPEG_RS12825	COG0628	permease
SOPEG_RS12830	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SOPEG_RS12830	COG0574	Belongs to the PEP-utilizing enzyme family
SOPEG_RS12850	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
SOPEG_RS12855	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SOPEG_RS12870	COG1484	DNA-dependent DNA replication
SOPEG_RS12875	COG4584	PFAM Integrase catalytic
SOPEG_RS12885	COG0095	Lipoate-protein ligase
SOPEG_RS12890	COG0791	NLP P60 protein
SOPEG_RS12895	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
SOPEG_RS12900	COG0386	Belongs to the glutathione peroxidase family
SOPEG_RS12905	COG4139	cobalamin transport
SOPEG_RS12920	COG0776	regulation of translation
SOPEG_RS12925	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SOPEG_RS12925	COG0072	phenylalanine-tRNA ligase activity
SOPEG_RS12930	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
SOPEG_RS12935	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
SOPEG_RS12940	COG0291	Belongs to the bacterial ribosomal protein bL35 family
SOPEG_RS12945	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
SOPEG_RS12950	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SOPEG_RS12975	COG2831	hemolysin activation secretion protein
SOPEG_RS12990	COG3001	Fructosamine kinase
SOPEG_RS13000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SOPEG_RS13005	COG1917	Cupin 2, conserved barrel domain protein
SOPEG_RS13020	COG3328	transposase activity
SOPEG_RS13045	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
SOPEG_RS13050	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
SOPEG_RS13095	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
SOPEG_RS13115	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS13115	COG1013	pyruvate-flavodoxin oxidoreductase activity
SOPEG_RS13115	COG0674	pyruvate-flavodoxin oxidoreductase activity
SOPEG_RS13115	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SOPEG_RS13130	COG3291	Pkd domain containing protein
SOPEG_RS13140	COG0037	tRNA processing
SOPEG_RS13195	COG3328	transposase activity
SOPEG_RS13210	COG3328	transposase activity
SOPEG_RS13215	COG3328	transposase activity
SOPEG_RS13230	COG3328	transposase activity
SOPEG_RS13235	COG3328	transposase activity
SOPEG_RS13245	COG3328	transposase activity
SOPEG_RS13280	COG3328	transposase activity
SOPEG_RS13305	COG2877	3-deoxy-8-phosphooctulonate synthase activity
SOPEG_RS13320	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
SOPEG_RS13325	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
SOPEG_RS13330	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
SOPEG_RS13335	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
SOPEG_RS13340	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SOPEG_RS13350	COG0193	aminoacyl-tRNA hydrolase activity
SOPEG_RS13355	COG0012	GTP binding
SOPEG_RS13375	COG2226	methyltransferase
SOPEG_RS13390	COG1201	RNA secondary structure unwinding
SOPEG_RS13400	COG3423	Transcriptional regulator
SOPEG_RS13420	COG3328	transposase activity
SOPEG_RS13425	COG3328	transposase activity
SOPEG_RS13440	COG4948	Mandelate Racemase Muconate Lactonizing
SOPEG_RS13445	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SOPEG_RS13455	COG3768	UPF0283 membrane protein
SOPEG_RS13460	COG3106	COG3106 Predicted ATPase
SOPEG_RS13465	COG3328	transposase activity
SOPEG_RS13480	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
SOPEG_RS13490	COG2917	probably involved in intracellular septation
SOPEG_RS13500	COG0727	PFAM Uncharacterised protein family (UPF0153)
SOPEG_RS13505	COG3047	cAMP biosynthetic process
SOPEG_RS13510	COG4584	PFAM Integrase catalytic
SOPEG_RS13515	COG1484	DNA-dependent DNA replication
SOPEG_RS13520	COG3328	transposase activity
SOPEG_RS13530	COG0159	tryptophan synthase activity
SOPEG_RS13545	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SOPEG_RS13560	COG0613	PHP domain protein
SOPEG_RS13565	COG0009	L-threonylcarbamoyladenylate synthase
SOPEG_RS13570	COG1187	pseudouridine synthase activity
SOPEG_RS13575	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
SOPEG_RS13585	COG0616	signal peptide processing
SOPEG_RS13600	COG0583	DNA-binding transcription factor activity
SOPEG_RS13630	COG0671	phosphoesterase, PA-phosphatase related
SOPEG_RS13635	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
SOPEG_RS13640	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
SOPEG_RS13645	COG0284	orotidine-5'-phosphate decarboxylase activity
SOPEG_RS13675	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
SOPEG_RS13700	COG4172	Belongs to the ABC transporter superfamily
SOPEG_RS13710	COG4171	peptide transport system, permease
SOPEG_RS13740	COG3328	transposase activity
SOPEG_RS13780	COG3328	transposase activity
SOPEG_RS13785	COG2842	Transposition protein
SOPEG_RS13810	COG0800	Aldolase
SOPEG_RS13815	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SOPEG_RS13820	COG1737	Transcriptional regulator
SOPEG_RS13825	COG0469	pyruvate kinase activity
SOPEG_RS13840	COG3328	transposase activity
SOPEG_RS13845	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
SOPEG_RS13870	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SOPEG_RS13870	COG0506	proline dehydrogenase activity
SOPEG_RS13870	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SOPEG_RS13920	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS13935	COG3381	protein complex oligomerization
SOPEG_RS13945	COG2999	glutathione oxidoreductase activity
SOPEG_RS13950	COG0477	Major facilitator Superfamily
SOPEG_RS13955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SOPEG_RS13965	COG4584	PFAM Integrase catalytic
SOPEG_RS13975	COG0018	arginyl-trna synthetase
SOPEG_RS13980	COG3102	Protein conserved in bacteria
SOPEG_RS13990	COG3142	Participates in the control of copper homeostasis
SOPEG_RS13995	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SOPEG_RS14005	COG3788	relative of glutathione S-transferase, MAPEG superfamily
SOPEG_RS14010	COG1801	Protein of unknown function DUF72
SOPEG_RS14015	COG1335	isochorismatase
SOPEG_RS14020	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SOPEG_RS14025	COG0494	nUDIX hydrolase
SOPEG_RS14030	COG0217	transcriptional regulatory protein
SOPEG_RS14035	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
SOPEG_RS14050	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SOPEG_RS14055	COG1121	(ABC) transporter
SOPEG_RS14060	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
SOPEG_RS14065	COG0739	heme binding
SOPEG_RS14070	COG1560	Kdo2-lipid A biosynthetic process
SOPEG_RS14090	COG3328	transposase activity
SOPEG_RS14145	COG3328	transposase activity
SOPEG_RS14150	COG3328	transposase activity
SOPEG_RS14155	COG3328	transposase activity
SOPEG_RS14190	COG0697	spore germination
SOPEG_RS14195	COG2195	Cleaves the N-terminal amino acid of tripeptides
SOPEG_RS14215	COG4584	PFAM Integrase catalytic
SOPEG_RS14255	COG3328	transposase activity
SOPEG_RS14260	COG3328	transposase activity
SOPEG_RS14265	COG1484	DNA-dependent DNA replication
SOPEG_RS14270	COG4584	PFAM Integrase catalytic
SOPEG_RS14285	COG3328	transposase activity
SOPEG_RS14290	COG3328	transposase activity
SOPEG_RS14300	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
SOPEG_RS14305	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
SOPEG_RS14310	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
SOPEG_RS14315	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SOPEG_RS14320	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SOPEG_RS14330	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
SOPEG_RS14335	COG2835	tetraacyldisaccharide 4'-kinase activity
SOPEG_RS14340	COG1663	tetraacyldisaccharide 4'-kinase activity
SOPEG_RS14345	COG1132	(ABC) transporter
SOPEG_RS14360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SOPEG_RS14365	COG0508	dehydrogenase complex catalyzes the overall conversion of
SOPEG_RS14370	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
SOPEG_RS14375	COG2186	Transcriptional regulator
SOPEG_RS14380	COG1113	amino acid transport
SOPEG_RS14385	COG1484	DNA-dependent DNA replication
SOPEG_RS14390	COG4584	PFAM Integrase catalytic
SOPEG_RS14405	COG4584	PFAM Integrase catalytic
SOPEG_RS14410	COG1484	DNA-dependent DNA replication
SOPEG_RS14420	COG3328	transposase activity
SOPEG_RS14425	COG3328	transposase activity
SOPEG_RS14430	COG3328	transposase activity
SOPEG_RS14455	COG0157	Belongs to the NadC ModD family
SOPEG_RS14460	COG4969	Belongs to the N-Me-Phe pilin family
SOPEG_RS14465	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SOPEG_RS14495	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
SOPEG_RS14500	COG0626	cystathionine gamma-synthase activity
SOPEG_RS14520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SOPEG_RS14530	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
SOPEG_RS14535	COG0165	Argininosuccinate lyase
SOPEG_RS14540	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SOPEG_RS14540	COG0678	peroxiredoxin activity
SOPEG_RS14550	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SOPEG_RS14565	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SOPEG_RS14575	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SOPEG_RS14585	COG3328	transposase activity
SOPEG_RS14610	COG4397	Mu-like prophage major head subunit gpT
SOPEG_RS14635	COG2369	cell adhesion
SOPEG_RS14660	COG3328	transposase activity
SOPEG_RS14675	COG0717	Belongs to the dCTP deaminase family
SOPEG_RS14690	COG0489	protein tyrosine kinase activity
SOPEG_RS14695	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SOPEG_RS14695	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SOPEG_RS14700	COG2814	Major facilitator Superfamily
SOPEG_RS14705	COG4584	PFAM Integrase catalytic
SOPEG_RS14710	COG1484	DNA-dependent DNA replication
SOPEG_RS14715	COG3328	transposase activity
SOPEG_RS14730	COG3328	transposase activity
SOPEG_RS14735	COG1346	cytolysis
SOPEG_RS14740	COG0295	cytidine deaminase activity
SOPEG_RS14750	COG2949	membrane
SOPEG_RS14755	COG4211	Belongs to the binding-protein-dependent transport system permease family
SOPEG_RS14780	COG1129	ABC transporter
SOPEG_RS14790	COG1129	ABC transporter
SOPEG_RS14825	COG3328	transposase activity
SOPEG_RS14830	COG3328	transposase activity
SOPEG_RS14835	COG2311	Membrane
SOPEG_RS14840	COG0302	gtp cyclohydrolase
SOPEG_RS14850	COG0583	DNA-binding transcription factor activity
SOPEG_RS14865	COG4771	TonB-dependent receptor
SOPEG_RS14875	COG4584	PFAM Integrase catalytic
SOPEG_RS14880	COG1484	DNA-dependent DNA replication
SOPEG_RS14885	COG3842	ATPase activity
SOPEG_RS14900	COG0583	DNA-binding transcription factor activity
SOPEG_RS14905	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
SOPEG_RS14915	COG1105	Belongs to the carbohydrate kinase PfkB family
SOPEG_RS14920	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS14920	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS14935	COG0246	Mannitol dehydrogenase
SOPEG_RS14950	COG0791	NLP P60 protein
SOPEG_RS14970	COG4174	ABC transporter (Permease)
SOPEG_RS14980	COG4172	Belongs to the ABC transporter superfamily
SOPEG_RS15015	COG2842	Transposition protein
SOPEG_RS15035	COG1484	DNA-dependent DNA replication
SOPEG_RS15040	COG4584	PFAM Integrase catalytic
SOPEG_RS15040	COG2390	Transcriptional regulator
SOPEG_RS15055	COG0672	)-iron permease
SOPEG_RS15060	COG2814	Major facilitator Superfamily
SOPEG_RS15065	COG1187	pseudouridine synthase activity
SOPEG_RS15075	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
SOPEG_RS15105	COG3082	Protein of unknown function (DUF1414)
SOPEG_RS15115	COG3617	BRO family, N-terminal domain
SOPEG_RS15145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SOPEG_RS15155	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SOPEG_RS15160	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SOPEG_RS15200	COG0625	glutathione transferase activity
SOPEG_RS15210	COG0583	DNA-binding transcription factor activity
SOPEG_RS15215	COG4584	PFAM Integrase catalytic
SOPEG_RS15220	COG1484	DNA-dependent DNA replication
SOPEG_RS15225	COG3328	transposase activity
SOPEG_RS15235	COG0477	Major facilitator Superfamily
SOPEG_RS15250	COG1441	menaquinone biosynthetic process
SOPEG_RS15260	COG0596	Alpha beta hydrolase
SOPEG_RS15280	COG4575	ribosome binding
SOPEG_RS15285	COG1007	ATP synthesis coupled electron transport
SOPEG_RS15290	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS15295	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SOPEG_RS15305	COG0839	Belongs to the complex I subunit 6 family
SOPEG_RS15310	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS15315	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
SOPEG_RS15325	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
SOPEG_RS15335	COG0649	NAD binding
SOPEG_RS15335	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS15340	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS15345	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SOPEG_RS15350	COG0583	DNA-binding transcription factor activity
SOPEG_RS15370	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
SOPEG_RS15375	COG3092	negative regulation of chromosome organization
SOPEG_RS15380	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SOPEG_RS15385	COG0857	belongs to the CobB CobQ family
SOPEG_RS15385	COG0280	phosphate acetyltransferase
SOPEG_RS15405	COG1090	epimerase
SOPEG_RS15440	COG3328	transposase activity
SOPEG_RS15450	COG0163	prenyltransferase activity
SOPEG_RS15455	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
SOPEG_RS15460	COG1286	toxin biosynthetic process
SOPEG_RS15465	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
SOPEG_RS15470	COG0285	dihydrofolate synthase activity
SOPEG_RS15475	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
SOPEG_RS15480	COG0586	Pfam SNARE associated Golgi protein
SOPEG_RS15485	COG1484	DNA-dependent DNA replication
SOPEG_RS15495	COG0586	Pfam SNARE associated Golgi protein
SOPEG_RS15500	COG0101	tRNA pseudouridine synthase activity
SOPEG_RS15510	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SOPEG_RS15525	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SOPEG_RS15545	COG0730	response to heat
SOPEG_RS15555	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
SOPEG_RS15560	COG2890	protein-(glutamine-N5) methyltransferase activity
SOPEG_RS15585	COG3328	transposase activity
SOPEG_RS15590	COG3328	transposase activity
SOPEG_RS15605	COG2062	phosphohistidine phosphatase, SixA
SOPEG_RS15610	COG3691	Protein conserved in bacteria
SOPEG_RS15625	COG3088	subunit of a heme lyase
SOPEG_RS15625	COG4235	cytochrome complex assembly
SOPEG_RS15630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SOPEG_RS15640	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
SOPEG_RS15645	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SOPEG_RS15650	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SOPEG_RS15660	COG4133	protoheme IX ABC transporter activity
SOPEG_RS15665	COG2116	formate transmembrane transporter activity
SOPEG_RS15680	COG3328	transposase activity
SOPEG_RS15685	COG3328	transposase activity
SOPEG_RS15690	COG3328	transposase activity
SOPEG_RS15725	COG4584	PFAM Integrase catalytic
SOPEG_RS15740	COG3729	General stress protein
SOPEG_RS15745	COG3328	transposase activity
SOPEG_RS15765	COG3275	phosphorelay sensor kinase activity
SOPEG_RS15790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SOPEG_RS15800	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
SOPEG_RS15835	COG1566	PFAM secretion protein HlyD family protein
SOPEG_RS15845	COG1846	Transcriptional regulator
SOPEG_RS15870	COG4603	Belongs to the binding-protein-dependent transport system permease family
SOPEG_RS15875	COG1079	Belongs to the binding-protein-dependent transport system permease family
SOPEG_RS15880	COG3530	Putative quorum-sensing-regulated virulence factor
SOPEG_RS15885	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
SOPEG_RS15890	COG3115	cell septum assembly
SOPEG_RS15900	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
SOPEG_RS15905	COG3328	transposase activity
SOPEG_RS15920	COG3328	transposase activity
SOPEG_RS15930	COG3328	transposase activity
SOPEG_RS15990	COG3328	transposase activity
SOPEG_RS16040	COG3328	transposase activity
SOPEG_RS16055	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS16070	COG2205	protein histidine kinase activity
SOPEG_RS16080	COG1484	DNA-dependent DNA replication
SOPEG_RS16085	COG2205	protein histidine kinase activity
SOPEG_RS16090	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS16110	COG4208	sulfate ABC transporter
SOPEG_RS16115	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
SOPEG_RS16130	COG0456	acetyltransferase
SOPEG_RS16135	COG0408	coproporphyrinogen oxidase activity
SOPEG_RS16140	COG1671	Belongs to the UPF0178 family
SOPEG_RS16145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SOPEG_RS16150	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SOPEG_RS16155	COG3328	transposase activity
SOPEG_RS16160	COG3328	transposase activity
SOPEG_RS16225	COG3328	transposase activity
SOPEG_RS16230	COG0494	nUDIX hydrolase
SOPEG_RS16245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SOPEG_RS16250	COG1393	Belongs to the ArsC family
SOPEG_RS16255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SOPEG_RS16265	COG3328	transposase activity
SOPEG_RS16270	COG1484	DNA-dependent DNA replication
SOPEG_RS16275	COG4584	PFAM Integrase catalytic
SOPEG_RS16280	COG1444	tRNA N-acetyltransferase activity
SOPEG_RS16285	COG2707	UPF0756 membrane protein
SOPEG_RS16295	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
SOPEG_RS16300	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
SOPEG_RS16305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SOPEG_RS16310	COG2716	regulation of RNA biosynthetic process
SOPEG_RS16315	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SOPEG_RS16320	COG4783	chaperone-mediated protein folding
SOPEG_RS16325	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
SOPEG_RS16330	COG2233	PERMEase
SOPEG_RS16335	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SOPEG_RS16345	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
SOPEG_RS16350	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SOPEG_RS16360	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SOPEG_RS16385	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
SOPEG_RS16395	COG0248	Ppx GppA phosphatase
SOPEG_RS16415	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS16425	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
SOPEG_RS16430	COG0830	nickel cation binding
SOPEG_RS16435	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
SOPEG_RS16445	COG0832	Belongs to the urease beta subunit family
SOPEG_RS16450	COG0831	urea catabolic process
SOPEG_RS16475	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS16485	COG0826	peptidase U32
SOPEG_RS16515	COG1484	DNA-dependent DNA replication
SOPEG_RS16520	COG4584	PFAM Integrase catalytic
SOPEG_RS16530	COG0351	phosphomethylpyrimidine kinase
SOPEG_RS16535	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
SOPEG_RS16550	COG0425	Belongs to the sulfur carrier protein TusA family
SOPEG_RS16555	COG2391	methyltransferase activity
SOPEG_RS16570	COG1288	antiporter activity
SOPEG_RS16575	COG1473	amidohydrolase
SOPEG_RS16580	COG0251	oxidation-reduction process
SOPEG_RS16585	COG0730	response to heat
SOPEG_RS16600	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SOPEG_RS16625	COG3328	transposase activity
SOPEG_RS16630	COG3328	transposase activity
SOPEG_RS16640	COG1733	regulation of RNA biosynthetic process
SOPEG_RS16670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
SOPEG_RS16670	COG0519	Catalyzes the synthesis of GMP from XMP
SOPEG_RS16675	COG0517	IMP dehydrogenase activity
SOPEG_RS16675	COG0516	GMP reductase activity
SOPEG_RS16680	COG1570	exodeoxyribonuclease VII activity
SOPEG_RS16685	COG2814	Major facilitator Superfamily
SOPEG_RS16695	COG0579	oxidoreductase
SOPEG_RS16700	COG0604	alcohol dehydrogenase
SOPEG_RS16700	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS16700	COG3321	synthase
SOPEG_RS16705	COG1609	Transcriptional regulator
SOPEG_RS16730	COG2084	Dehydrogenase
SOPEG_RS16735	COG3328	transposase activity
SOPEG_RS16740	COG3328	transposase activity
SOPEG_RS16745	COG1484	DNA-dependent DNA replication
SOPEG_RS16750	COG4584	PFAM Integrase catalytic
SOPEG_RS16755	COG3328	transposase activity
SOPEG_RS16765	COG1645	bacterial-type flagellum-dependent swarming motility
SOPEG_RS16770	COG1160	GTP binding
SOPEG_RS16775	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS16780	COG2976	Protein conserved in bacteria
SOPEG_RS16785	COG0124	histidyl-tRNA synthetase
SOPEG_RS16790	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
SOPEG_RS16805	COG0820	rRNA (adenine-C2-)-methyltransferase activity
SOPEG_RS16810	COG0105	UTP biosynthetic process
SOPEG_RS16815	COG2897	thiosulfate sulfurtransferase activity
SOPEG_RS16845	COG0483	inositol monophosphate 1-phosphatase activity
SOPEG_RS16855	COG3711	transcriptional antiterminator
SOPEG_RS16860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SOPEG_RS16865	COG0347	Belongs to the P(II) protein family
SOPEG_RS16870	COG2204	response regulator
SOPEG_RS16885	COG0047	phosphoribosylformylglycinamidine synthase activity
SOPEG_RS16885	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SOPEG_RS16890	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
SOPEG_RS16915	COG1737	Transcriptional regulator
SOPEG_RS16925	COG4584	PFAM Integrase catalytic
SOPEG_RS16930	COG4584	PFAM Integrase catalytic
SOPEG_RS16930	COG2390	Transcriptional regulator
SOPEG_RS16940	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SOPEG_RS16945	COG0736	holo-[acyl-carrier-protein] synthase activity
SOPEG_RS16950	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
SOPEG_RS16955	COG1381	Involved in DNA repair and RecF pathway recombination
SOPEG_RS16965	COG0571	ribonuclease III activity
SOPEG_RS16975	COG0481	GTPase activity
SOPEG_RS17000	COG0738	Major facilitator superfamily
SOPEG_RS17025	COG1451	nucleotide metabolic process
SOPEG_RS17045	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS17055	COG0789	Transcriptional regulator
SOPEG_RS17065	COG3328	transposase activity
SOPEG_RS17070	COG1484	DNA-dependent DNA replication
SOPEG_RS17075	COG4584	PFAM Integrase catalytic
SOPEG_RS17130	COG3328	transposase activity
SOPEG_RS17145	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS17185	COG2223	nitrite transmembrane transporter activity
SOPEG_RS17195	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SOPEG_RS17210	COG3123	guanosine phosphorylase activity
SOPEG_RS17220	COG4584	PFAM Integrase catalytic
SOPEG_RS17230	COG3328	transposase activity
SOPEG_RS17260	COG0420	3'-5' exonuclease activity
SOPEG_RS17270	COG3328	transposase activity
SOPEG_RS17280	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SOPEG_RS17290	COG1862	Preprotein translocase
SOPEG_RS17340	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SOPEG_RS17345	COG0463	Glycosyl transferase, family 2
SOPEG_RS17350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SOPEG_RS17350	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SOPEG_RS17355	COG0726	polysaccharide deacetylase
SOPEG_RS17360	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
SOPEG_RS17365	COG2076	Multidrug Resistance protein
SOPEG_RS17370	COG2076	Multidrug Resistance protein
SOPEG_RS17380	COG3328	transposase activity
SOPEG_RS17385	COG3086	response to oxidative stress
SOPEG_RS17390	COG3026	antisigma factor binding
SOPEG_RS17405	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
SOPEG_RS17435	COG0513	Belongs to the DEAD box helicase family
SOPEG_RS17445	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
SOPEG_RS17450	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
SOPEG_RS17455	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SOPEG_RS17470	COG0497	DNA recombination
SOPEG_RS17505	COG1484	DNA-dependent DNA replication
SOPEG_RS17510	COG4584	PFAM Integrase catalytic
SOPEG_RS17525	COG3328	transposase activity
SOPEG_RS17535	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS17540	COG2914	Belongs to the UPF0125 (RnfH) family
SOPEG_RS17545	COG2867	negative regulation of translational initiation
SOPEG_RS17550	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
SOPEG_RS17555	COG3328	transposase activity
SOPEG_RS17605	COG2186	Transcriptional regulator
SOPEG_RS17625	COG4774	siderophore transport
SOPEG_RS17630	COG3328	transposase activity
SOPEG_RS17635	COG4774	siderophore transport
SOPEG_RS17655	COG3328	transposase activity
SOPEG_RS17665	COG2842	Transposition protein
SOPEG_RS17680	COG4584	PFAM Integrase catalytic
SOPEG_RS17685	COG1484	DNA-dependent DNA replication
SOPEG_RS17690	COG3328	transposase activity
SOPEG_RS17695	COG1598	PFAM Uncharacterised protein family UPF0150
SOPEG_RS17745	COG1862	Preprotein translocase
SOPEG_RS17755	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SOPEG_RS17765	COG0582	viral genome integration into host DNA
SOPEG_RS17820	COG3328	transposase activity
SOPEG_RS17830	COG4584	PFAM Integrase catalytic
SOPEG_RS17860	COG4608	Belongs to the ABC transporter superfamily
SOPEG_RS17870	COG1561	YicC-like family, N-terminal region
SOPEG_RS17875	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
SOPEG_RS17885	COG3328	transposase activity
SOPEG_RS17890	COG1484	DNA-dependent DNA replication
SOPEG_RS17895	COG4584	PFAM Integrase catalytic
SOPEG_RS17930	COG3424	synthase
SOPEG_RS17940	COG0243	molybdopterin cofactor binding
SOPEG_RS18010	COG1846	Transcriptional regulator
SOPEG_RS18015	COG0194	GDP metabolic process
SOPEG_RS18020	COG1758	RNA polymerase activity
SOPEG_RS18035	COG2233	PERMEase
SOPEG_RS18040	COG2982	Protein involved in outer membrane biogenesis
SOPEG_RS18045	COG0456	acetyltransferase
SOPEG_RS18050	COG1490	D-aminoacyl-tRNA deacylase activity
SOPEG_RS18055	COG1295	ribonuclease BN
SOPEG_RS18060	COG1011	Hydrolase
SOPEG_RS18065	COG0738	Major facilitator superfamily
SOPEG_RS18075	COG1349	DNA-binding transcription factor activity
SOPEG_RS18080	COG1217	gtp-binding protein TYPA
SOPEG_RS18115	COG0218	Necessary for normal cell division and for the maintenance of normal septation
SOPEG_RS18120	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SOPEG_RS18120	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SOPEG_RS18160	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SOPEG_RS18165	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SOPEG_RS18170	COG2011	ABC-type metal ion transport system permease component
SOPEG_RS18190	COG0442	prolyl-tRNA aminoacylation
SOPEG_RS18195	COG4584	PFAM Integrase catalytic
SOPEG_RS18200	COG1484	DNA-dependent DNA replication
SOPEG_RS18205	COG3328	transposase activity
SOPEG_RS18210	COG3328	transposase activity
SOPEG_RS18215	COG3328	transposase activity
SOPEG_RS18230	COG4568	rho-dependent transcription termination
SOPEG_RS18235	COG0037	tRNA processing
SOPEG_RS18240	COG0346	lactoylglutathione lyase activity
SOPEG_RS18245	COG1982	Orn Lys Arg decarboxylase major
SOPEG_RS18250	COG0825	malonyl-CoA metabolic process
SOPEG_RS18260	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SOPEG_RS18265	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SOPEG_RS18270	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SOPEG_RS18275	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
SOPEG_RS18280	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SOPEG_RS18285	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
SOPEG_RS18290	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS18295	COG0750	zinc metalloprotease
SOPEG_RS18300	COG0575	Belongs to the CDS family
SOPEG_RS18305	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SOPEG_RS18310	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
SOPEG_RS18315	COG0233	cytoplasmic translational termination
SOPEG_RS18320	COG0528	UMP kinase activity
SOPEG_RS18325	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
SOPEG_RS18330	COG0052	Belongs to the universal ribosomal protein uS2 family
SOPEG_RS18340	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
SOPEG_RS18345	COG2171	N-acyltransferase activity
SOPEG_RS18365	COG3098	single-species biofilm formation
SOPEG_RS18375	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
SOPEG_RS18375	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
SOPEG_RS18380	COG1611	Belongs to the LOG family
SOPEG_RS18385	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SOPEG_RS18400	COG3328	transposase activity
SOPEG_RS18410	COG1484	DNA-dependent DNA replication
SOPEG_RS18415	COG4584	PFAM Integrase catalytic
SOPEG_RS18440	COG0583	DNA-binding transcription factor activity
SOPEG_RS18495	COG0860	N-Acetylmuramoyl-L-alanine amidase
SOPEG_RS18500	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
SOPEG_RS18500	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
SOPEG_RS18505	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SOPEG_RS18510	COG1074	ATP-dependent DNA helicase activity
SOPEG_RS18520	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
SOPEG_RS18540	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
SOPEG_RS18545	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
SOPEG_RS18555	COG1051	belongs to the nudix hydrolase family
SOPEG_RS18575	COG0861	Integral membrane protein TerC family
SOPEG_RS18585	COG0667	Aldo Keto reductase
SOPEG_RS18590	COG0477	Major facilitator Superfamily
SOPEG_RS18615	COG1484	DNA-dependent DNA replication
SOPEG_RS18630	COG0583	DNA-binding transcription factor activity
SOPEG_RS18635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SOPEG_RS18650	COG2814	Major facilitator Superfamily
SOPEG_RS18665	COG1028	Short-chain dehydrogenase reductase Sdr
SOPEG_RS18665	COG3321	synthase
SOPEG_RS18665	COG0604	alcohol dehydrogenase
SOPEG_RS18675	COG4584	PFAM Integrase catalytic
SOPEG_RS18680	COG1484	DNA-dependent DNA replication
SOPEG_RS18685	COG3328	transposase activity
SOPEG_RS18695	COG3842	ATPase activity
SOPEG_RS18700	COG1176	ABC-type spermidine putrescine transport system, permease component I
SOPEG_RS18715	COG0519	Catalyzes the synthesis of GMP from XMP
SOPEG_RS18715	COG0518	GMP synthase (glutamine-hydrolyzing) activity
SOPEG_RS18765	COG2755	lipolytic protein G-D-S-L family
SOPEG_RS18765	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SOPEG_RS18800	COG3328	transposase activity
SOPEG_RS18810	COG4584	PFAM Integrase catalytic
SOPEG_RS18850	COG3265	gluconokinase activity
SOPEG_RS18855	COG3328	transposase activity
SOPEG_RS18860	COG0129	dihydroxy-acid dehydratase activity
SOPEG_RS18865	COG1484	DNA-dependent DNA replication
SOPEG_RS18895	COG0583	DNA-binding transcription factor activity
SOPEG_RS18905	COG1484	DNA-dependent DNA replication
SOPEG_RS18925	COG3328	transposase activity
SOPEG_RS18940	COG3328	transposase activity
SOPEG_RS18975	COG5464	transposase or invertase
SOPEG_RS19005	COG3328	transposase activity
SOPEG_RS19010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SOPEG_RS19045	COG4597	amino acid ABC transporter
SOPEG_RS19055	COG1126	abc transporter atp-binding protein
SOPEG_RS19060	COG3328	transposase activity
SOPEG_RS19095	COG0151	Belongs to the GarS family
SOPEG_RS19115	COG1515	deoxyribonuclease V activity
SOPEG_RS19140	COG0352	thiamine-phosphate diphosphorylase activity
SOPEG_RS19150	COG2104	thiamine diphosphate biosynthetic process
SOPEG_RS19190	COG3328	transposase activity
SOPEG_RS19215	COG4695	Portal protein
SOPEG_RS19225	COG5160	protein modification by small protein removal
SOPEG_RS19270	COG3328	transposase activity
SOPEG_RS19275	COG1484	DNA-dependent DNA replication
SOPEG_RS19280	COG4584	PFAM Integrase catalytic
SOPEG_RS19285	COG3328	transposase activity
SOPEG_RS19305	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SOPEG_RS19310	COG0085	RNA polymerase activity
SOPEG_RS19315	COG0222	ribosome binding
SOPEG_RS19320	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
SOPEG_RS19325	COG0081	regulation of translation
SOPEG_RS19330	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
SOPEG_RS19335	COG0250	Participates in transcription elongation, termination and antitermination
SOPEG_RS19345	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SOPEG_RS19370	COG1072	(Pantothenic acid kinase))
SOPEG_RS19385	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SOPEG_RS19400	COG3328	transposase activity
SOPEG_RS19430	COG1739	Uncharacterized protein family UPF0029
SOPEG_RS19445	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
SOPEG_RS19455	COG0805	protein transport
SOPEG_RS19460	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SOPEG_RS19465	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SOPEG_RS19470	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
SOPEG_RS19475	COG3165	ubiquinone biosynthetic process from chorismate
SOPEG_RS19485	COG1322	Protein conserved in bacteria
SOPEG_RS19490	COG0586	Pfam SNARE associated Golgi protein
SOPEG_RS19500	COG0412	Dienelactone hydrolase
SOPEG_RS19530	COG0405	Gamma-glutamyltransferase
SOPEG_RS19555	COG1175	transmembrane transport
SOPEG_RS19565	COG3328	transposase activity
SOPEG_RS19575	COG4584	PFAM Integrase catalytic
SOPEG_RS19595	COG2177	Part of the ABC transporter FtsEX involved in
SOPEG_RS19600	COG2884	Cell division ATP-binding protein ftsE
SOPEG_RS19605	COG0552	protein localization to endoplasmic reticulum
SOPEG_RS19610	COG0742	ribosomal rna small subunit methyltransferase
SOPEG_RS19615	COG3776	membrane
SOPEG_RS19625	COG3714	YhhN family
SOPEG_RS19630	COG0425	Belongs to the sulfur carrier protein TusA family
SOPEG_RS19645	COG0625	glutathione transferase activity
SOPEG_RS19650	COG3328	transposase activity
SOPEG_RS19660	COG3328	transposase activity
SOPEG_RS19665	COG3237	CsbD-like
SOPEG_RS19670	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SOPEG_RS19680	COG2937	Belongs to the GPAT DAPAT family
SOPEG_RS19685	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
SOPEG_RS19690	COG3161	chorismate lyase activity
SOPEG_RS19700	COG3328	transposase activity
SOPEG_RS19730	COG0166	Belongs to the GPI family
SOPEG_RS19785	COG4584	PFAM Integrase catalytic
SOPEG_RS19790	COG1484	DNA-dependent DNA replication
SOPEG_RS19795	COG3328	transposase activity
SOPEG_RS19820	COG3328	transposase activity
SOPEG_RS19830	COG4584	PFAM Integrase catalytic
SOPEG_RS19865	COG3328	transposase activity
SOPEG_RS19870	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
SOPEG_RS19885	COG4145	pantothenate transmembrane transporter activity
SOPEG_RS19890	COG3924	membrane
SOPEG_RS19900	COG0439	Biotin carboxylase
SOPEG_RS19905	COG0511	ligase activity, forming carbon-carbon bonds
SOPEG_RS19910	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
SOPEG_RS19915	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
SOPEG_RS19930	COG1077	Cell shape determining protein MreB Mrl
SOPEG_RS19935	COG1792	Involved in formation and maintenance of cell shape
SOPEG_RS19940	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
SOPEG_RS19950	COG1530	ribonuclease E activity
SOPEG_RS19955	COG3164	Protein of unknown function
SOPEG_RS19965	COG0583	DNA-binding transcription factor activity
SOPEG_RS19980	COG1289	transmembrane transporter activity
SOPEG_RS19990	COG2732	(Barnase) inhibitor
SOPEG_RS19995	COG3028	Belongs to the UPF0307 family
SOPEG_RS20005	COG3783	Cytochrome b(562)
SOPEG_RS20010	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SOPEG_RS20020	COG2733	membrane
SOPEG_RS20060	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
SOPEG_RS20080	COG1484	DNA-dependent DNA replication
SOPEG_RS20085	COG4584	PFAM Integrase catalytic
SOPEG_RS20095	COG0392	lysyltransferase activity
SOPEG_RS20100	COG0384	phenazine biosynthesis protein PhzF
SOPEG_RS20120	COG1309	transcriptional regulator
SOPEG_RS20150	COG2207	Transcriptional regulator
SOPEG_RS20265	COG0436	Aminotransferase
SOPEG_RS20275	COG3328	transposase activity
SOPEG_RS20280	COG1484	DNA-dependent DNA replication
SOPEG_RS20285	COG4584	PFAM Integrase catalytic
SOPEG_RS20335	COG1360	Flagellar Motor Protein
SOPEG_RS20340	COG2198	Histidine kinase
SOPEG_RS20340	COG0643	Histidine kinase
SOPEG_RS20345	COG0835	chemotaxis
SOPEG_RS20370	COG0745	RESPONSE REGULATOR receiver
SOPEG_RS20400	COG2747	anti-sigma28 factor FlgM
SOPEG_RS20405	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
SOPEG_RS20415	COG1815	bacterial-type flagellum-dependent cell motility
SOPEG_RS20420	COG1558	bacterial-type flagellum-dependent cell motility
SOPEG_RS20425	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
SOPEG_RS20440	COG4786	Flagellar basal body rod
SOPEG_RS20460	COG1256	bacterial-type flagellum assembly
SOPEG_RS20485	COG1987	bacterial-type flagellum assembly
SOPEG_RS20500	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SOPEG_RS20505	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SOPEG_RS20515	COG3144	bacterial-type flagellum assembly
SOPEG_RS20565	COG3328	transposase activity
SOPEG_RS20585	COG3328	transposase activity
SOPEG_RS20595	COG2188	Transcriptional regulator
SOPEG_RS20670	COG1349	DNA-binding transcription factor activity
SOPEG_RS20675	COG3842	ATPase activity
SOPEG_RS20685	COG0395	ABC-type sugar transport system, permease component
SOPEG_RS20690	COG1175	transmembrane transport
SOPEG_RS20710	COG3328	transposase activity
SOPEG_RS20725	COG1484	DNA-dependent DNA replication
SOPEG_RS20730	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
SOPEG_RS20735	COG3328	transposase activity
SOPEG_RS20740	COG1982	Orn Lys Arg decarboxylase major
SOPEG_RS20745	COG0741	lytic transglycosylase activity
SOPEG_RS20750	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
SOPEG_RS20755	COG1194	a g-specific adenine glycosylase
SOPEG_RS20760	COG0220	tRNA (guanine-N7-)-methyltransferase activity
SOPEG_RS20770	COG1484	DNA-dependent DNA replication
SOPEG_RS20780	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SOPEG_RS20795	COG0762	integral membrane protein
SOPEG_RS20800	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SOPEG_RS20805	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SOPEG_RS20810	COG2805	Type II/IV secretion system protein
SOPEG_RS20825	COG1917	Cupin 2, conserved barrel domain protein
SOPEG_RS20825	COG4977	sequence-specific DNA binding
SOPEG_RS20830	COG1917	Cupin 2, conserved barrel domain protein
SOPEG_RS20830	COG2169	Transcriptional regulator
SOPEG_RS20835	COG1070	Carbohydrate kinase
SOPEG_RS20855	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
SOPEG_RS20860	COG1678	Uncharacterized ACR, COG1678
SOPEG_RS20865	COG0189	ligase activity
SOPEG_RS20870	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SOPEG_RS20875	COG2356	endonuclease I
SOPEG_RS20880	COG3091	SprT-like family
SOPEG_RS20895	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
SOPEG_RS20920	COG0126	phosphoglycerate kinase activity
SOPEG_RS20950	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SOPEG_RS20955	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SOPEG_RS20960	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SOPEG_RS20965	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
SOPEG_RS20975	COG0006	proline dipeptidase activity
SOPEG_RS20980	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SOPEG_RS20985	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SOPEG_RS20990	COG0404	The glycine cleavage system catalyzes the degradation of glycine
SOPEG_RS20995	COG0509	glycine decarboxylation via glycine cleavage system
SOPEG_RS21010	COG1272	protein, Hemolysin III
SOPEG_RS21015	COG0354	folic acid binding
SOPEG_RS21020	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
SOPEG_RS21030	COG0716	FMN binding
SOPEG_RS21035	COG4974	Belongs to the 'phage' integrase family
SOPEG_RS21045	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SOPEG_RS21050	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SOPEG_RS21055	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SOPEG_RS21085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SOPEG_RS21090	COG1869	D-ribose catabolic process
SOPEG_RS21100	COG4948	Mandelate Racemase Muconate Lactonizing
SOPEG_RS21105	COG0667	Aldo Keto reductase
SOPEG_RS21135	COG4584	PFAM Integrase catalytic
SOPEG_RS21140	COG1484	DNA-dependent DNA replication
SOPEG_RS21150	COG3328	transposase activity
SOPEG_RS21155	COG3328	transposase activity
SOPEG_RS21180	COG0673	inositol 2-dehydrogenase activity
SOPEG_RS21185	COG0519	Catalyzes the synthesis of GMP from XMP
SOPEG_RS21185	COG0518	GMP synthase (glutamine-hydrolyzing) activity
SOPEG_RS21205	COG0246	Mannitol dehydrogenase
SOPEG_RS21210	COG1904	glucuronate isomerase
SOPEG_RS21240	COG3328	transposase activity
SOPEG_RS21245	COG0582	viral genome integration into host DNA
SOPEG_RS21255	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
SOPEG_RS21260	COG2501	S4 domain
SOPEG_RS21265	COG0215	cysteine-tRNA ligase activity
SOPEG_RS21270	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SOPEG_RS21275	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SOPEG_RS21285	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SOPEG_RS21290	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
SOPEG_RS21310	COG2755	lipolytic protein G-D-S-L family
SOPEG_RS21315	COG0300	oxidoreductase activity
SOPEG_RS21320	COG3118	belongs to the thioredoxin family
SOPEG_RS21325	COG0330	HflC and HflK could
SOPEG_RS21330	COG1585	Membrane protein implicated in regulation of membrane protease activity
SOPEG_RS21340	COG3735	TraB family
SOPEG_RS21345	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SOPEG_RS21350	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SOPEG_RS21350	COG4651	solute:proton antiporter activity
SOPEG_RS21355	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SOPEG_RS21365	COG0563	adenylate kinase activity
SOPEG_RS21370	COG0326	Molecular chaperone. Has ATPase activity
SOPEG_RS21375	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
SOPEG_RS21380	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
SOPEG_RS21390	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SOPEG_RS21400	COG1309	transcriptional regulator
SOPEG_RS21405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SOPEG_RS21410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SOPEG_RS21430	COG3695	enzyme binding
SOPEG_RS21435	COG3126	Type III secretion system lipoprotein chaperone (YscW)
SOPEG_RS21440	COG3328	transposase activity
SOPEG_RS21450	COG3328	transposase activity
SOPEG_RS21470	COG0347	Belongs to the P(II) protein family
SOPEG_RS21475	COG1132	(ABC) transporter
SOPEG_RS21480	COG1132	(ABC) transporter
SOPEG_RS21505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SOPEG_RS21515	COG0776	regulation of translation
SOPEG_RS21520	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
SOPEG_RS21525	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
SOPEG_RS21535	COG0544	peptidyl-prolyl cis-trans isomerase activity
SOPEG_RS21540	COG0271	Belongs to the BolA IbaG family
SOPEG_RS21545	COG3056	Lipoprotein
SOPEG_RS21560	COG1845	cytochrome c oxidase, subunit III
SOPEG_RS21565	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
SOPEG_RS21570	COG0109	protoheme IX farnesyltransferase activity
SOPEG_RS21575	COG2814	Major facilitator Superfamily
SOPEG_RS21580	COG1666	GTP binding
SOPEG_RS21595	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SOPEG_RS21595	COG0301	tRNA thio-modification
SOPEG_RS21600	COG1722	exodeoxyribonuclease VII activity
SOPEG_RS21605	COG0142	geranyltranstransferase activity
SOPEG_RS21610	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
SOPEG_RS21625	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SOPEG_RS21630	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
SOPEG_RS21635	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SOPEG_RS21640	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
SOPEG_RS21645	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SOPEG_RS21645	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SOPEG_RS21665	COG3328	transposase activity
SOPEG_RS21675	COG0306	phosphate transporter
SOPEG_RS21685	COG0589	response to stress
SOPEG_RS21695	COG3328	transposase activity
SOPEG_RS21730	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SOPEG_RS21740	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
SOPEG_RS21745	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
SOPEG_RS21750	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SOPEG_RS21790	COG3328	transposase activity
SOPEG_RS21795	COG1484	DNA-dependent DNA replication
SOPEG_RS21850	COG1215	transferase activity, transferring glycosyl groups
SOPEG_RS21855	COG0457	Tetratricopeptide repeat
SOPEG_RS21870	COG2181	nitrate reductase activity
SOPEG_RS21915	COG0583	DNA-binding transcription factor activity
SOPEG_RS21925	COG1172	Belongs to the binding-protein-dependent transport system permease family
SOPEG_RS21935	COG3328	transposase activity
SOPEG_RS21950	COG4584	PFAM Integrase catalytic
SOPEG_RS21960	COG3328	transposase activity
SOPEG_RS21965	COG3328	transposase activity
SOPEG_RS21970	COG1484	DNA-dependent DNA replication
SOPEG_RS21975	COG4584	PFAM Integrase catalytic
SOPEG_RS21980	COG3328	transposase activity
SOPEG_RS21985	COG2271	Major facilitator Superfamily
SOPEG_RS22010	COG5645	(Lipo)protein
SOPEG_RS22015	COG0071	Belongs to the small heat shock protein (HSP20) family
SOPEG_RS22020	COG0071	Belongs to the small heat shock protein (HSP20) family
SOPEG_RS22045	COG0752	glycyl-tRNA synthetase alpha subunit
SOPEG_RS22050	COG0751	glycine-tRNA ligase activity
SOPEG_RS22065	COG0246	Mannitol dehydrogenase
SOPEG_RS22070	COG3722	fumarate hydratase activity
SOPEG_RS22075	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SOPEG_RS22090	COG0625	glutathione transferase activity
SOPEG_RS22105	COG4584	PFAM Integrase catalytic
SOPEG_RS22105	COG2390	Transcriptional regulator
SOPEG_RS22110	COG1484	DNA-dependent DNA replication
SOPEG_RS22135	COG3328	transposase activity
SOPEG_RS22140	COG3328	transposase activity
SOPEG_RS22150	COG3328	transposase activity
SOPEG_RS22160	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SOPEG_RS22165	COG0706	membrane insertase activity
SOPEG_RS22170	COG0594	ribonuclease P activity
SOPEG_RS22175	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
SOPEG_RS22180	COG0592	DNA-directed DNA polymerase activity
SOPEG_RS22205	COG2186	Transcriptional regulator
SOPEG_RS22210	COG4584	PFAM Integrase catalytic
SOPEG_RS22220	COG3328	transposase activity
SOPEG_RS22240	COG3328	transposase activity
SOPEG_RS22270	COG3158	transport of potassium into the cell
SOPEG_RS22280	COG2425	protein containing a von Willebrand factor type A (vWA) domain
SOPEG_RS22285	COG1522	sequence-specific DNA binding
SOPEG_RS22290	COG0716	FMN binding
SOPEG_RS22300	COG4584	PFAM Integrase catalytic
SOPEG_RS22300	COG2390	Transcriptional regulator
SOPEG_RS22400	COG0058	SHG alpha-glucan phosphorylase activity
SOPEG_RS22405	COG4584	PFAM Integrase catalytic
SOPEG_RS22405	COG2390	Transcriptional regulator
SOPEG_RS22415	COG2882	bacterial-type flagellum organization
SOPEG_RS22450	COG4584	PFAM Integrase catalytic
SOPEG_RS22455	COG4584	PFAM Integrase catalytic
SOPEG_RS22455	COG2390	Transcriptional regulator
SOPEG_RS22460	COG1472	Belongs to the glycosyl hydrolase 3 family
SOPEG_RS22470	COG2390	Transcriptional regulator
SOPEG_RS22470	COG4584	PFAM Integrase catalytic
SOPEG_RS22475	COG0625	glutathione transferase activity
SOPEG_RS22490	COG5301	cellulose 1,4-beta-cellobiosidase activity
SOPEG_RS22500	COG1070	Carbohydrate kinase
SOPEG_RS22505	COG1070	Carbohydrate kinase
SOPEG_RS22525	COG0419	ATPase involved in DNA repair
SOPEG_RS22530	COG0419	ATPase involved in DNA repair
SOPEG_RS22535	COG0419	ATPase involved in DNA repair
SOPEG_RS22540	COG0420	3'-5' exonuclease activity
SOPEG_RS22545	COG0420	3'-5' exonuclease activity
SOPEG_RS22555	COG1609	Transcriptional regulator
SOPEG_RS22560	COG4670	ketone body catabolic process
SOPEG_RS22575	COG3061	Opacity-associated protein A
SOPEG_RS22580	COG0741	lytic transglycosylase activity
SOPEG_RS22625	COG3328	transposase activity
SOPEG_RS22630	COG3328	transposase activity
SOPEG_RS22650	COG4584	PFAM Integrase catalytic
SOPEG_RS22670	COG3706	GGDEF domain
SOPEG_RS22670	COG4251	negative regulation of phosphorylation
SOPEG_RS22670	COG5001	Diguanylate cyclase
SOPEG_RS22670	COG2203	Gaf domain
SOPEG_RS22675	COG0477	Major facilitator Superfamily
SOPEG_RS22690	COG0477	Major facilitator Superfamily
SOPEG_RS22695	COG1289	transmembrane transporter activity
SOPEG_RS22700	COG1289	transmembrane transporter activity
SOPEG_RS22725	COG5464	transposase or invertase
SOPEG_RS22745	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SOPEG_RS22750	COG1984	allophanate hydrolase subunit 2
SOPEG_RS22765	COG3328	transposase activity
SOPEG_RS22770	COG3328	transposase activity
SOPEG_RS22800	COG3328	transposase activity
SOPEG_RS22855	COG4575	ribosome binding
SOPEG_RS22885	COG3328	transposase activity
SOPEG_RS22910	COG1484	DNA-dependent DNA replication
SOPEG_RS22915	COG1484	DNA-dependent DNA replication
SOPEG_RS22965	COG4932	domain protein
SOPEG_RS22970	COG4932	domain protein
SOPEG_RS22980	COG4584	PFAM Integrase catalytic
SOPEG_RS22990	COG2390	Transcriptional regulator
SOPEG_RS22990	COG4584	PFAM Integrase catalytic
SOPEG_RS23010	COG1069	ribulokinase activity
SOPEG_RS23015	COG1069	ribulokinase activity
SOPEG_RS23020	COG0477	Major facilitator Superfamily
SOPEG_RS23025	COG0477	Major facilitator Superfamily
SOPEG_RS23045	COG4584	PFAM Integrase catalytic
SOPEG_RS23055	COG2911	Protein conserved in bacteria
SOPEG_RS23080	COG3328	transposase activity
SOPEG_RS23105	COG2333	competence protein COMEC
SOPEG_RS23105	COG0658	competence protein
SOPEG_RS23110	COG2333	competence protein COMEC
SOPEG_RS23110	COG0658	competence protein
SOPEG_RS23120	COG4584	PFAM Integrase catalytic
SOPEG_RS23120	COG2390	Transcriptional regulator
SOPEG_RS23130	COG3328	transposase activity
SOPEG_RS23150	COG3328	transposase activity
SOPEG_RS23170	COG1169	isochorismate synthase
SOPEG_RS23200	COG4584	PFAM Integrase catalytic
SOPEG_RS23235	COG0625	glutathione transferase activity
SOPEG_RS23245	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
SOPEG_RS23260	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
SOPEG_RS23285	COG0419	ATPase involved in DNA repair
SOPEG_RS23295	COG0419	ATPase involved in DNA repair
SOPEG_RS23305	COG5301	cellulose 1,4-beta-cellobiosidase activity
SOPEG_RS23310	COG4584	PFAM Integrase catalytic
SOPEG_RS23310	COG2390	Transcriptional regulator
SOPEG_RS23330	COG4584	PFAM Integrase catalytic
SOPEG_RS23330	COG2390	Transcriptional regulator
SOPEG_RS23340	COG0145	ligase activity
SOPEG_RS23370	COG0444	Belongs to the ABC transporter superfamily
SOPEG_RS23400	COG4584	PFAM Integrase catalytic
SOPEG_RS23400	COG2390	Transcriptional regulator
SOPEG_RS23405	COG4584	PFAM Integrase catalytic
SOPEG_RS23420	COG3328	transposase activity
SOPEG_RS23430	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
SOPEG_RS23465	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SOPEG_RS23480	COG2188	Transcriptional regulator
SOPEG_RS23495	COG3121	Chaperone
SOPEG_RS23500	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SOPEG_RS23560	COG4584	PFAM Integrase catalytic
SOPEG_RS23565	COG4584	PFAM Integrase catalytic
SOPEG_RS23565	COG2390	Transcriptional regulator
SOPEG_RS23570	COG2211	Major facilitator Superfamily
SOPEG_RS23590	COG2217	Heavy metal translocating P-type atpase
SOPEG_RS23595	COG3328	transposase activity
SOPEG_RS23600	COG1295	ribonuclease BN
SOPEG_RS23605	COG1295	ribonuclease BN
SOPEG_RS23615	COG3328	transposase activity
SOPEG_RS23630	COG3328	transposase activity
SOPEG_RS23650	COG2186	Transcriptional regulator