##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM51740v1 #!genome-build-accession NCBI_Assembly:GCF_000517405.1 ##sequence-region NZ_CP006568.1 1 4513140 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2342 NZ_CP006568.1 RefSeq region 1 4513140 . + . ID=id0;Dbxref=taxon:2342;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Sitophilus oryzae;strain=SOPE NZ_CP006568.1 RefSeq gene 351 2240 . + . ID=gene0;Name=SOPEG_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00005;old_locus_tag=SOPEG_0001 NZ_CP006568.1 Protein Homology CDS 351 2240 . + 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_025243820.1;Name=WP_025243820.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243820.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2258 2878 . + . ID=gene1;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SOPEG_RS00010;old_locus_tag=SOPEG_0002 NZ_CP006568.1 Protein Homology CDS 2258 2878 . + 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_025243821.1;Name=WP_025243821.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase;protein_id=WP_025243821.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3510 3884 . + . ID=gene2;Name=SOPEG_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00015;old_locus_tag=SOPEG_0003 NZ_CP006568.1 Protein Homology CDS 3510 3884 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_025243822.1;Name=WP_025243822.1;gbkey=CDS;product=ATP synthase F0F1 subunit I;protein_id=WP_025243822.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3893 4711 . + . ID=gene3;Name=SOPEG_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00020;old_locus_tag=SOPEG_0004 NZ_CP006568.1 Protein Homology CDS 3893 4711 . + 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_038467949.1;Name=WP_038467949.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase F0F1 subunit A;protein_id=WP_038467949.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4761 5000 . + . ID=gene4;Name=SOPEG_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00025;old_locus_tag=SOPEG_0005 NZ_CP006568.1 Protein Homology CDS 4761 5000 . + 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NZ_CP006568.1 RefSeq gene 5058 5528 . + . ID=gene5;Name=SOPEG_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00030;old_locus_tag=SOPEG_0006 NZ_CP006568.1 Protein Homology CDS 5058 5528 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_025243824.1;Name=WP_025243824.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP F0F1 synthase subunit B;protein_id=WP_025243824.1;transl_table=11 NZ_CP006568.1 RefSeq gene 5542 6075 . + . ID=gene6;Name=SOPEG_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00035;old_locus_tag=SOPEG_0007 NZ_CP006568.1 Protein Homology CDS 5542 6075 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_025243825.1;Name=WP_025243825.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP F0F1 synthase subunit delta;protein_id=WP_025243825.1;transl_table=11 NZ_CP006568.1 RefSeq gene 6088 7629 . + . ID=gene7;Name=SOPEG_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00040;old_locus_tag=SOPEG_0008 NZ_CP006568.1 Protein Homology CDS 6088 7629 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_025243826.1;Name=WP_025243826.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP F0F1 synthase subunit alpha;protein_id=WP_025243826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 7680 8543 . + . ID=gene8;Name=SOPEG_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00045;old_locus_tag=SOPEG_0009 NZ_CP006568.1 Protein Homology CDS 7680 8543 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_025243827.1;Name=WP_025243827.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP F0F1 synthase subunit gamma;protein_id=WP_025243827.1;transl_table=11 NZ_CP006568.1 RefSeq gene 8570 9952 . + . ID=gene9;Name=SOPEG_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00050;old_locus_tag=SOPEG_0010 NZ_CP006568.1 Protein Homology CDS 8570 9952 . + 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_025243828.1;Name=WP_025243828.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_025243828.1;transl_table=11 NZ_CP006568.1 RefSeq gene 9973 10395 . + . ID=gene10;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SOPEG_RS00055;old_locus_tag=SOPEG_0011 NZ_CP006568.1 Protein Homology CDS 9973 10395 . + 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_025243829.1;Name=WP_025243829.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=WP_025243829.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 10437 11760 . + . ID=id1;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 10513 11721 . + . ID=gene11;Name=SOPEG_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00060;old_locus_tag=SOPEG_0012 NZ_CP006568.1 Protein Homology CDS 10513 11721 . + 0 ID=cds11;Parent=gene11;Dbxref=Genbank:WP_025243830.1;Name=WP_025243830.1;gbkey=CDS;product=transposase;protein_id=WP_025243830.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 11872 15764 . + . ID=id2;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 12073 12813 . + . ID=gene12;Name=SOPEG_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00065 NZ_CP006568.1 Protein Homology CDS 12073 12813 . + 0 ID=cds12;Parent=gene12;Dbxref=Genbank:WP_051419359.1;Name=WP_051419359.1;gbkey=CDS;product=transposase;protein_id=WP_051419359.1;transl_table=11 NZ_CP006568.1 RefSeq gene 13272 13589 . + . ID=gene13;Name=SOPEG_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22300 NZ_CP006568.1 Protein Homology CDS 13272 13589 . + 0 ID=cds13;Parent=gene13;Dbxref=Genbank:WP_051419360.1;Name=WP_051419360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419360.1;transl_table=11 NZ_CP006568.1 RefSeq gene 13601 14349 . + . ID=gene14;Name=SOPEG_RS00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00075;pseudo=true NZ_CP006568.1 Protein Homology CDS 13601 14349 . + 0 ID=cds14;Parent=gene14;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 14518 15705 . + . ID=gene15;Name=SOPEG_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00080 NZ_CP006568.1 Protein Homology CDS 14518 15705 . + 0 ID=cds15;Parent=gene15;Dbxref=Genbank:WP_038467956.1;Name=WP_038467956.1;gbkey=CDS;product=transposase;protein_id=WP_038467956.1;transl_table=11 NZ_CP006568.1 RefSeq gene 15925 17301 . + . ID=gene16;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SOPEG_RS00085;old_locus_tag=SOPEG_0016 NZ_CP006568.1 Protein Homology CDS 15925 17301 . + 0 ID=cds16;Parent=gene16;Dbxref=Genbank:WP_025243832.1;Name=WP_025243832.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=WP_025243832.1;transl_table=11 NZ_CP006568.1 RefSeq gene 17450 19282 . + . ID=gene17;Name=SOPEG_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00090;old_locus_tag=SOPEG_0017 NZ_CP006568.1 Protein Homology CDS 17450 19282 . + 0 ID=cds17;Parent=gene17;Dbxref=Genbank:WP_025243833.1;Name=WP_025243833.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=WP_025243833.1;transl_table=11 NZ_CP006568.1 RefSeq gene 19677 20702 . + . ID=gene18;Name=SOPEG_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00095 NZ_CP006568.1 Protein Homology CDS 19677 20702 . + 0 ID=cds18;Parent=gene18;Dbxref=Genbank:WP_051419361.1;Name=WP_051419361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419361.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 20635 23154 . + . ID=id3;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 20695 21618 . - . ID=gene19;Name=SOPEG_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00100;old_locus_tag=SOPEG_0019 NZ_CP006568.1 Protein Homology CDS 20695 21618 . - 0 ID=cds19;Parent=gene19;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 21679 22413 . - . ID=gene20;Name=SOPEG_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22305;old_locus_tag=SOPEG_ps0020 NZ_CP006568.1 Protein Homology CDS 21679 22413 . - 0 ID=cds20;Parent=gene20;Dbxref=Genbank:WP_025243835.1;Name=WP_025243835.1;gbkey=CDS;product=transposase;protein_id=WP_025243835.1;transl_table=11 NZ_CP006568.1 RefSeq gene 22954 23094 . + . ID=gene21;Name=SOPEG_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00110 NZ_CP006568.1 Protein Homology CDS 22954 23094 . + 0 ID=cds21;Parent=gene21;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 23136 23849 . - . ID=gene22;Name=SOPEG_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22310;old_locus_tag=SOPEG_0022 NZ_CP006568.1 Protein Homology CDS 23136 23849 . - 0 ID=cds22;Parent=gene22;Dbxref=Genbank:WP_051419362.1;Name=WP_051419362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419362.1;transl_table=11 NZ_CP006568.1 RefSeq gene 24120 24791 . - . ID=gene23;Name=SOPEG_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00120;old_locus_tag=SOPEG_0023 NZ_CP006568.1 Protein Homology CDS 24120 24791 . - 0 ID=cds23;Parent=gene23;Dbxref=Genbank:WP_025243837.1;Name=WP_025243837.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243837.1;transl_table=11 NZ_CP006568.1 RefSeq gene 25278 25736 . + . ID=gene24;Name=SOPEG_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00125;old_locus_tag=SOPEG_0024 NZ_CP006568.1 Protein Homology CDS 25278 25736 . + 0 ID=cds24;Parent=gene24;Dbxref=Genbank:WP_025243838.1;Name=WP_025243838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243838.1;transl_table=11 NZ_CP006568.1 RefSeq gene 25844 26068 . + . ID=gene25;Name=SOPEG_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00130 NZ_CP006568.1 Protein Homology CDS 25844 26068 . + 0 ID=cds25;Parent=gene25;Dbxref=Genbank:WP_038467962.1;Name=WP_038467962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038467962.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 26003 27063 . + . ID=id4;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 26061 26984 . - . ID=gene26;Name=SOPEG_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00135;old_locus_tag=SOPEG_0026 NZ_CP006568.1 Protein Homology CDS 26061 26984 . - 0 ID=cds26;Parent=gene26;Dbxref=Genbank:WP_025243839.1;Name=WP_025243839.1;gbkey=CDS;product=transposase;protein_id=WP_025243839.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 27367 29658 . + . ID=id5;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 27447 28364 . + . ID=gene27;Name=SOPEG_RS00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00140;pseudo=true NZ_CP006568.1 Protein Homology CDS 27447 28364 . + 0 ID=cds27;Parent=gene27;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:28110..28112%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 28375 29583 . - . ID=gene28;Name=SOPEG_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00150;old_locus_tag=SOPEG_0028 NZ_CP006568.1 Protein Homology CDS 28375 29583 . - 0 ID=cds28;Parent=gene28;Dbxref=Genbank:WP_025243842.1;Name=WP_025243842.1;gbkey=CDS;product=transposase;protein_id=WP_025243842.1;transl_table=11 NZ_CP006568.1 RefSeq gene 30506 30970 . + . ID=gene29;Name=SOPEG_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00155 NZ_CP006568.1 Protein Homology CDS 30506 30970 . + 0 ID=cds29;Parent=gene29;Dbxref=Genbank:WP_025243843.1;Name=WP_025243843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243843.1;transl_table=11 NZ_CP006568.1 RefSeq gene 31018 31416 . + . ID=gene30;Name=SOPEG_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00160;old_locus_tag=SOPEG_0031 NZ_CP006568.1 Protein Homology CDS 31018 31416 . + 0 ID=cds30;Parent=gene30;Dbxref=Genbank:WP_025243844.1;Name=WP_025243844.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243844.1;transl_table=11 NZ_CP006568.1 RefSeq gene 31400 32773 . + . ID=gene31;Name=SOPEG_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00165 NZ_CP006568.1 Protein Homology CDS 31400 32773 . + 0 ID=cds31;Parent=gene31;Dbxref=Genbank:WP_025243845.1;Name=WP_025243845.1;gbkey=CDS;product=terminase;protein_id=WP_025243845.1;transl_table=11 NZ_CP006568.1 RefSeq gene 32774 34171 . + . ID=gene32;Name=SOPEG_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00170;old_locus_tag=SOPEG_0033 NZ_CP006568.1 Protein Homology CDS 32774 34171 . + 0 ID=cds32;Parent=gene32;Dbxref=Genbank:WP_051419363.1;Name=WP_051419363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419363.1;transl_table=11 NZ_CP006568.1 RefSeq gene 34200 34862 . + . ID=gene33;Name=SOPEG_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00175;old_locus_tag=SOPEG_0034 NZ_CP006568.1 Protein Homology CDS 34200 34862 . + 0 ID=cds33;Parent=gene33;Dbxref=Genbank:WP_025243846.1;Name=WP_025243846.1;gbkey=CDS;product=phage head morphogenesis protein;protein_id=WP_025243846.1;transl_table=11 NZ_CP006568.1 RefSeq gene 34866 36104 . + . ID=gene34;Name=SOPEG_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00180;old_locus_tag=SOPEG_0035 NZ_CP006568.1 Protein Homology CDS 34866 36104 . + 0 ID=cds34;Parent=gene34;Dbxref=Genbank:WP_025243847.1;Name=WP_025243847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243847.1;transl_table=11 NZ_CP006568.1 RefSeq gene 36101 36598 . + . ID=gene35;Name=SOPEG_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00185;old_locus_tag=SOPEG_0036 NZ_CP006568.1 Protein Homology CDS 36101 36598 . + 0 ID=cds35;Parent=gene35;Dbxref=Genbank:WP_025243848.1;Name=WP_025243848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243848.1;transl_table=11 NZ_CP006568.1 RefSeq gene 36613 37566 . + . ID=gene36;Name=SOPEG_RS00190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00190;pseudo=true NZ_CP006568.1 Protein Homology CDS 36613 37566 . + 0 ID=cds36;Parent=gene36;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:37072..37074%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 37585 37986 . + . ID=gene37;Name=SOPEG_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00195;old_locus_tag=SOPEG_0038 NZ_CP006568.1 Protein Homology CDS 37585 37986 . + 0 ID=cds37;Parent=gene37;Dbxref=Genbank:WP_025243849.1;Name=WP_025243849.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243849.1;transl_table=11 NZ_CP006568.1 RefSeq gene 37983 38526 . + . ID=gene38;Name=SOPEG_RS00200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00200;pseudo=true NZ_CP006568.1 Protein Homology CDS 37983 38526 . + 0 ID=cds38;Parent=gene38;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 38513 38902 . + . ID=gene39;Name=SOPEG_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00205;old_locus_tag=SOPEG_0040 NZ_CP006568.1 Protein Homology CDS 38513 38902 . + 0 ID=cds39;Parent=gene39;Dbxref=Genbank:WP_025243850.1;Name=WP_025243850.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243850.1;transl_table=11 NZ_CP006568.1 RefSeq gene 38877 39440 . + . ID=gene40;Name=SOPEG_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00210;old_locus_tag=SOPEG_0041 NZ_CP006568.1 Protein Homology CDS 38877 39440 . + 0 ID=cds40;Parent=gene40;Dbxref=Genbank:WP_038467966.1;Name=WP_038467966.1;gbkey=CDS;product=bacteriophage protein;protein_id=WP_038467966.1;transl_table=11 NZ_CP006568.1 RefSeq gene 39444 40922 . + . ID=gene41;Name=SOPEG_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00215;old_locus_tag=SOPEG_0042 NZ_CP006568.1 Protein Homology CDS 39444 40922 . + 0 ID=cds41;Parent=gene41;Dbxref=Genbank:WP_025243852.1;Name=WP_025243852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243852.1;transl_table=11 NZ_CP006568.1 RefSeq gene 40935 41375 . + . ID=gene42;Name=SOPEG_RS00220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00220;pseudo=true NZ_CP006568.1 Protein Homology CDS 40935 41375 . + 0 ID=cds42;Parent=gene42;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:41244..41246%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 41379 41786 . + . ID=gene43;Name=SOPEG_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00225;old_locus_tag=SOPEG_0044 NZ_CP006568.1 Protein Homology CDS 41379 41786 . + 0 ID=cds43;Parent=gene43;Dbxref=Genbank:WP_025243853.1;Name=WP_025243853.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243853.1;transl_table=11 NZ_CP006568.1 RefSeq gene 41967 43855 . + . ID=gene44;Name=SOPEG_RS22315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22315;pseudo=true NZ_CP006568.1 Protein Homology CDS 41967 43855 . + 0 ID=cds44;Parent=gene44;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lytic transglycosylase catalytic;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 43855 44433 . + . ID=gene45;Name=SOPEG_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00240;old_locus_tag=SOPEG_0046 NZ_CP006568.1 Protein Homology CDS 43855 44433 . + 0 ID=cds45;Parent=gene45;Dbxref=Genbank:WP_025243857.1;Name=WP_025243857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243857.1;transl_table=11 NZ_CP006568.1 RefSeq gene 44423 44722 . + . ID=gene46;Name=SOPEG_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00245;old_locus_tag=SOPEG_0047 NZ_CP006568.1 Protein Homology CDS 44423 44722 . + 0 ID=cds46;Parent=gene46;Dbxref=Genbank:WP_025243858.1;Name=WP_025243858.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243858.1;transl_table=11 NZ_CP006568.1 RefSeq gene 44755 45330 . + . ID=gene47;Name=SOPEG_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00250 NZ_CP006568.1 Protein Homology CDS 44755 45330 . + 0 ID=cds47;Parent=gene47;Dbxref=Genbank:WP_025243859.1;Name=WP_025243859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243859.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 45201 46523 . + . ID=id6;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 45238 46222 . - . ID=gene48;Name=SOPEG_RS00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00255;pseudo=true NZ_CP006568.1 Protein Homology CDS 45238 46222 . - 0 ID=cds48;Parent=gene48;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 46601 49876 . + . ID=id7;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 46724 47473 . - . ID=gene49;Name=SOPEG_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00260;old_locus_tag=SOPEG_0050 NZ_CP006568.1 Protein Homology CDS 46724 47473 . - 0 ID=cds49;Parent=gene49;Dbxref=Genbank:WP_025243860.1;Name=WP_025243860.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243860.1;transl_table=11 NZ_CP006568.1 RefSeq gene 47485 48861 . - . ID=gene50;Name=SOPEG_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00265 NZ_CP006568.1 Protein Homology CDS 47485 48861 . - 0 ID=cds50;Parent=gene50;Dbxref=Genbank:WP_051419364.1;Name=WP_051419364.1;gbkey=CDS;product=transposase;protein_id=WP_051419364.1;transl_table=11 NZ_CP006568.1 RefSeq gene 49228 49839 . + . ID=gene51;Name=SOPEG_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00270 NZ_CP006568.1 Protein Homology CDS 49228 49839 . + 0 ID=cds51;Parent=gene51;Dbxref=Genbank:WP_025243861.1;Name=WP_025243861.1;gbkey=CDS;product=transposase;protein_id=WP_025243861.1;transl_table=11 NZ_CP006568.1 RefSeq gene 50379 51491 . - . ID=gene52;Name=SOPEG_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00275 NZ_CP006568.1 Protein Homology CDS 50379 51491 . - 0 ID=cds52;Parent=gene52;Dbxref=Genbank:WP_025243862.1;Name=WP_025243862.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_025243862.1;transl_table=11 NZ_CP006568.1 RefSeq gene 51589 52539 . - . ID=gene53;Name=SOPEG_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00280 NZ_CP006568.1 Protein Homology CDS 51589 52539 . - 0 ID=cds53;Parent=gene53;Dbxref=Genbank:WP_025243863.1;Name=WP_025243863.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243863.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 51992 52134 . + . ID=id8;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 52645 52950 . - . ID=gene54;Name=SOPEG_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22320 NZ_CP006568.1 Protein Homology CDS 52645 52950 . - 0 ID=cds54;Parent=gene54;Dbxref=Genbank:WP_051419365.1;Name=WP_051419365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419365.1;transl_table=11 NZ_CP006568.1 RefSeq gene 52992 53267 . + . ID=gene55;Name=SOPEG_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22325 NZ_CP006568.1 GeneMarkS+ CDS 52992 53267 . + 0 ID=cds55;Parent=gene55;Dbxref=Genbank:WP_051419366.1;Name=WP_051419366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419366.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 53616 54679 . + . ID=id9;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 53695 54618 . + . ID=gene56;Name=SOPEG_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00290;old_locus_tag=SOPEG_0057 NZ_CP006568.1 Protein Homology CDS 53695 54618 . + 0 ID=cds56;Parent=gene56;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 55217 55552 . + . ID=gene57;Name=SOPEG_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00295 NZ_CP006568.1 Protein Homology CDS 55217 55552 . + 0 ID=cds57;Parent=gene57;Dbxref=Genbank:WP_051419367.1;Name=WP_051419367.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419367.1;transl_table=11 NZ_CP006568.1 RefSeq gene 55549 56067 . + . ID=gene58;Name=SOPEG_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00300;old_locus_tag=SOPEG_0060 NZ_CP006568.1 Protein Homology CDS 55549 56067 . + 0 ID=cds58;Parent=gene58;Dbxref=Genbank:WP_025243867.1;Name=WP_025243867.1;gbkey=CDS;product=lysozyme;protein_id=WP_025243867.1;transl_table=11 NZ_CP006568.1 RefSeq gene 56052 56429 . + . ID=gene59;Name=SOPEG_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00305 NZ_CP006568.1 Protein Homology CDS 56052 56429 . + 0 ID=cds59;Parent=gene59;Dbxref=Genbank:WP_025243868.1;Name=WP_025243868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243868.1;transl_table=11 NZ_CP006568.1 RefSeq gene 56426 56662 . + . ID=gene60;Name=SOPEG_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00310 NZ_CP006568.1 Protein Homology CDS 56426 56662 . + 0 ID=cds60;Parent=gene60;Dbxref=Genbank:WP_038467969.1;Name=WP_038467969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038467969.1;transl_table=11 NZ_CP006568.1 RefSeq gene 56871 58172 . + . ID=gene61;Name=SOPEG_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00315;old_locus_tag=SOPEG_0061 NZ_CP006568.1 Protein Homology CDS 56871 58172 . + 0 ID=cds61;Parent=gene61;Dbxref=Genbank:WP_025243869.1;Name=WP_025243869.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_025243869.1;transl_table=11 NZ_CP006568.1 RefSeq gene 58274 59650 . + . ID=gene62;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=pseudogene;gene_synonym=sapG;locus_tag=SOPEG_RS00320;pseudo=true NZ_CP006568.1 Protein Homology CDS 58274 59650 . + 0 ID=cds62;Parent=gene62;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane component;pseudo=true;transl_except=(pos:58523..58525%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 59748 60209 . + . ID=gene63;Name=SOPEG_RS00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00325;pseudo=true NZ_CP006568.1 Protein Homology CDS 59748 60209 . + 0 ID=cds63;Parent=gene63;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:59763..59765%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 60215 60463 . - . ID=gene64;Name=SOPEG_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00330;old_locus_tag=SOPEG_0064 NZ_CP006568.1 Protein Homology CDS 60215 60463 . - 0 ID=cds64;Parent=gene64;Dbxref=Genbank:WP_025243870.1;Name=WP_025243870.1;gbkey=CDS;product=ribosome rescue factor A;protein_id=WP_025243870.1;transl_table=11 NZ_CP006568.1 RefSeq gene 60508 60876 . - . ID=gene65;Name=SOPEG_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00335;old_locus_tag=SOPEG_0065 NZ_CP006568.1 Protein Homology CDS 60508 60876 . - 0 ID=cds65;Parent=gene65;Dbxref=Genbank:WP_025243871.1;Name=WP_025243871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 61364 63560 . + . ID=gene66;Name=SOPEG_RS00345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00345;pseudo=true NZ_CP006568.1 Protein Homology CDS 61364 63560 . + 0 ID=cds66;Parent=gene66;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ferric-rhodotorulic acid transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 63762 66123 . + . ID=id10;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 63799 64017 . - . ID=gene67;Name=SOPEG_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00350 NZ_CP006568.1 Protein Homology CDS 63799 64017 . - 0 ID=cds67;Parent=gene67;Dbxref=Genbank:WP_025246989.1;Name=WP_025246989.1;gbkey=CDS;product=transposase;protein_id=WP_025246989.1;transl_table=11 NZ_CP006568.1 RefSeq gene 63950 65008 . - . ID=gene68;Name=SOPEG_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00355 NZ_CP006568.1 Protein Homology CDS 63950 65008 . - 0 ID=cds68;Parent=gene68;Dbxref=Genbank:WP_038467978.1;Name=WP_038467978.1;gbkey=CDS;product=transposase;protein_id=WP_038467978.1;transl_table=11 NZ_CP006568.1 RefSeq gene 65109 65556 . - . ID=gene69;Name=SOPEG_RS22330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22330;pseudo=true NZ_CP006568.1 Protein Homology CDS 65109 65556 . - 0 ID=cds69;Parent=gene69;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 66098 66643 . - . ID=gene70;Name=SOPEG_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00365 NZ_CP006568.1 Protein Homology CDS 66098 66643 . - 0 ID=cds70;Parent=gene70;Dbxref=Genbank:WP_025243872.1;Name=WP_025243872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243872.1;transl_table=11 NZ_CP006568.1 RefSeq gene 66666 66998 . - . ID=gene71;Name=SOPEG_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00370 NZ_CP006568.1 GeneMarkS+ CDS 66666 66998 . - 0 ID=cds71;Parent=gene71;Dbxref=Genbank:WP_025243873.1;Name=WP_025243873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243873.1;transl_table=11 NZ_CP006568.1 RefSeq gene 67574 67969 . - . ID=gene72;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SOPEG_RS00375;old_locus_tag=SOPEG_0070 NZ_CP006568.1 Protein Homology CDS 67574 67969 . - 0 ID=cds72;Parent=gene72;Dbxref=Genbank:WP_025243874.1;Name=WP_025243874.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_025243874.1;transl_table=11 NZ_CP006568.1 RefSeq gene 68010 68963 . - . ID=gene73;Name=SOPEG_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00380;old_locus_tag=SOPEG_0071 NZ_CP006568.1 Protein Homology CDS 68010 68963 . - 0 ID=cds73;Parent=gene73;Dbxref=Genbank:WP_038467982.1;Name=WP_038467982.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_038467982.1;transl_table=11 NZ_CP006568.1 RefSeq gene 69026 69646 . - . ID=gene74;Name=SOPEG_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00385;old_locus_tag=SOPEG_0072 NZ_CP006568.1 Protein Homology CDS 69026 69646 . - 0 ID=cds74;Parent=gene74;Dbxref=Genbank:WP_025243875.1;Name=WP_025243875.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_025243875.1;transl_table=11 NZ_CP006568.1 RefSeq gene 69677 70066 . - . ID=gene75;Name=SOPEG_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00390;old_locus_tag=SOPEG_0073 NZ_CP006568.1 Protein Homology CDS 69677 70066 . - 0 ID=cds75;Parent=gene75;Dbxref=Genbank:WP_025243876.1;Name=WP_025243876.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_025243876.1;transl_table=11 NZ_CP006568.1 RefSeq gene 70083 70439 . - . ID=gene76;Name=SOPEG_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00395;old_locus_tag=SOPEG_0074 NZ_CP006568.1 Protein Homology CDS 70083 70439 . - 0 ID=cds76;Parent=gene76;Dbxref=Genbank:WP_025243877.1;Name=WP_025243877.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_025243877.1;transl_table=11 NZ_CP006568.1 RefSeq gene 70737 72068 . - . ID=gene77;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SOPEG_RS00400;old_locus_tag=SOPEG_0076 NZ_CP006568.1 Protein Homology CDS 70737 72068 . - 0 ID=cds77;Parent=gene77;Dbxref=Genbank:WP_025243878.1;Name=WP_025243878.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_025243878.1;transl_table=11 NZ_CP006568.1 RefSeq gene 72047 72511 . - . ID=gene78;Name=SOPEG_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00405;old_locus_tag=SOPEG_0077 NZ_CP006568.1 Protein Homology CDS 72047 72511 . - 0 ID=cds78;Parent=gene78;Dbxref=Genbank:WP_025243879.1;Name=WP_025243879.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_025243879.1;transl_table=11 NZ_CP006568.1 RefSeq gene 72515 72694 . - . ID=gene79;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SOPEG_RS00410;old_locus_tag=SOPEG_0078 NZ_CP006568.1 Protein Homology CDS 72515 72694 . - 0 ID=cds79;Parent=gene79;Dbxref=Genbank:WP_025243880.1;Name=WP_025243880.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_025243880.1;transl_table=11 NZ_CP006568.1 RefSeq gene 72701 73201 . - . ID=gene80;Name=SOPEG_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00415;old_locus_tag=SOPEG_0079 NZ_CP006568.1 Protein Homology CDS 72701 73201 . - 0 ID=cds80;Parent=gene80;Dbxref=Genbank:WP_025243881.1;Name=WP_025243881.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_025243881.1;transl_table=11 NZ_CP006568.1 RefSeq gene 73216 73569 . - . ID=gene81;Name=SOPEG_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00420;old_locus_tag=SOPEG_0080 NZ_CP006568.1 Protein Homology CDS 73216 73569 . - 0 ID=cds81;Parent=gene81;Dbxref=Genbank:WP_025243882.1;Name=WP_025243882.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_025243882.1;transl_table=11 NZ_CP006568.1 RefSeq gene 73579 74112 . - . ID=gene82;Name=SOPEG_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00425;old_locus_tag=SOPEG_0081 NZ_CP006568.1 Protein Homology CDS 73579 74112 . - 0 ID=cds82;Parent=gene82;Dbxref=Genbank:WP_025243883.1;Name=WP_025243883.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_025243883.1;transl_table=11 NZ_CP006568.1 RefSeq gene 74126 74518 . - . ID=gene83;Name=SOPEG_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00430;old_locus_tag=SOPEG_0082 NZ_CP006568.1 Protein Homology CDS 74126 74518 . - 0 ID=cds83;Parent=gene83;Dbxref=Genbank:WP_025243884.1;Name=WP_025243884.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_025243884.1;transl_table=11 NZ_CP006568.1 RefSeq gene 74553 74858 . - . ID=gene84;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SOPEG_RS00435;old_locus_tag=SOPEG_0083 NZ_CP006568.1 Protein Homology CDS 74553 74858 . - 0 ID=cds84;Parent=gene84;Dbxref=Genbank:WP_025243885.1;Name=WP_025243885.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_025243885.1;transl_table=11 NZ_CP006568.1 RefSeq gene 74872 75411 . - . ID=gene85;Name=SOPEG_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00440;old_locus_tag=SOPEG_0084 NZ_CP006568.1 Protein Homology CDS 74872 75411 . - 0 ID=cds85;Parent=gene85;Dbxref=Genbank:WP_025243886.1;Name=WP_025243886.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_025243886.1;transl_table=11 NZ_CP006568.1 RefSeq gene 75426 75740 . - . ID=gene86;Name=SOPEG_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00445;old_locus_tag=SOPEG_0085 NZ_CP006568.1 Protein Homology CDS 75426 75740 . - 0 ID=cds86;Parent=gene86;Dbxref=Genbank:WP_025243887.1;Name=WP_025243887.1;gbkey=CDS;product=50S ribosomal protein L24;protein_id=WP_025243887.1;transl_table=11 NZ_CP006568.1 RefSeq gene 75751 76122 . - . ID=gene87;Name=SOPEG_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00450;old_locus_tag=SOPEG_0086 NZ_CP006568.1 Protein Homology CDS 75751 76122 . - 0 ID=cds87;Parent=gene87;Dbxref=Genbank:WP_011412078.1;Name=WP_011412078.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_011412078.1;transl_table=11 NZ_CP006568.1 RefSeq gene 76298 76552 . - . ID=gene88;Name=SOPEG_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00455;old_locus_tag=SOPEG_0087 NZ_CP006568.1 Protein Homology CDS 76298 76552 . - 0 ID=cds88;Parent=gene88;Dbxref=Genbank:WP_025243888.1;Name=WP_025243888.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_025243888.1;transl_table=11 NZ_CP006568.1 RefSeq gene 76552 76743 . - . ID=gene89;Name=SOPEG_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00460;old_locus_tag=SOPEG_0088 NZ_CP006568.1 Protein Homology CDS 76552 76743 . - 0 ID=cds89;Parent=gene89;Dbxref=Genbank:WP_025243889.1;Name=WP_025243889.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_025243889.1;transl_table=11 NZ_CP006568.1 RefSeq gene 76743 77153 . - . ID=gene90;Name=SOPEG_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00465;old_locus_tag=SOPEG_0089 NZ_CP006568.1 Protein Homology CDS 76743 77153 . - 0 ID=cds90;Parent=gene90;Dbxref=Genbank:WP_025243890.1;Name=WP_025243890.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_025243890.1;transl_table=11 NZ_CP006568.1 RefSeq gene 77166 77864 . - . ID=gene91;Name=SOPEG_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00470;old_locus_tag=SOPEG_0090 NZ_CP006568.1 Protein Homology CDS 77166 77864 . - 0 ID=cds91;Parent=gene91;Dbxref=Genbank:WP_025243891.1;Name=WP_025243891.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_025243891.1;transl_table=11 NZ_CP006568.1 RefSeq gene 77882 78214 . - . ID=gene92;Name=SOPEG_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00475;old_locus_tag=SOPEG_0091 NZ_CP006568.1 Protein Homology CDS 77882 78214 . - 0 ID=cds92;Parent=gene92;Dbxref=Genbank:WP_011412083.1;Name=WP_011412083.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_011412083.1;transl_table=11 NZ_CP006568.1 RefSeq gene 78229 78507 . - . ID=gene93;Name=SOPEG_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00480;old_locus_tag=SOPEG_0092 NZ_CP006568.1 Protein Homology CDS 78229 78507 . - 0 ID=cds93;Parent=gene93;Dbxref=Genbank:WP_011412084.1;Name=WP_011412084.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_011412084.1;transl_table=11 NZ_CP006568.1 RefSeq gene 78524 79345 . - . ID=gene94;Name=SOPEG_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00485;old_locus_tag=SOPEG_0093 NZ_CP006568.1 Protein Homology CDS 78524 79345 . - 0 ID=cds94;Parent=gene94;Dbxref=Genbank:WP_025243892.1;Name=WP_025243892.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_025243892.1;transl_table=11 NZ_CP006568.1 RefSeq gene 79365 79667 . - . ID=gene95;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SOPEG_RS00490;old_locus_tag=SOPEG_0094 NZ_CP006568.1 Protein Homology CDS 79365 79667 . - 0 ID=cds95;Parent=gene95;Dbxref=Genbank:WP_025243893.1;Name=WP_025243893.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_025243893.1;transl_table=11 NZ_CP006568.1 RefSeq gene 79664 80269 . - . ID=gene96;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SOPEG_RS00495;old_locus_tag=SOPEG_0095 NZ_CP006568.1 Protein Homology CDS 79664 80269 . - 0 ID=cds96;Parent=gene96;Dbxref=Genbank:WP_025243894.1;Name=WP_025243894.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_025243894.1;transl_table=11 NZ_CP006568.1 RefSeq gene 80286 80915 . - . ID=gene97;Name=SOPEG_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00500;old_locus_tag=SOPEG_0096 NZ_CP006568.1 Protein Homology CDS 80286 80915 . - 0 ID=cds97;Parent=gene97;Dbxref=Genbank:WP_025243895.1;Name=WP_025243895.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_025243895.1;transl_table=11 NZ_CP006568.1 RefSeq gene 80948 81259 . - . ID=gene98;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SOPEG_RS00505;old_locus_tag=SOPEG_0097 NZ_CP006568.1 Protein Homology CDS 80948 81259 . - 0 ID=cds98;Parent=gene98;Dbxref=Genbank:WP_025243896.1;Name=WP_025243896.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_025243896.1;transl_table=11 NZ_CP006568.1 RefSeq gene 81791 82270 . - . ID=gene99;Name=SOPEG_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00510;old_locus_tag=SOPEG_0098 NZ_CP006568.1 Protein Homology CDS 81791 82270 . - 0 ID=cds99;Parent=gene99;Dbxref=Genbank:WP_025243897.1;Name=WP_025243897.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_025243897.1;transl_table=11 NZ_CP006568.1 RefSeq gene 82345 82539 . - . ID=gene100;Name=SOPEG_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00515;old_locus_tag=SOPEG_0099 NZ_CP006568.1 Protein Homology CDS 82345 82539 . - 0 ID=cds100;Parent=gene100;Dbxref=Genbank:WP_025243898.1;Name=WP_025243898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243898.1;transl_table=11 NZ_CP006568.1 RefSeq gene 82807 83248 . + . ID=gene101;Name=SOPEG_RS00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00520;pseudo=true NZ_CP006568.1 Protein Homology CDS 82807 83248 . + 0 ID=cds101;Parent=gene101;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 83392 83729 . + . ID=gene102;Name=SOPEG_RS00525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00525;pseudo=true NZ_CP006568.1 Protein Homology CDS 83392 83729 . + 0 ID=cds102;Parent=gene102;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 83726 84928 . + . ID=gene103;Name=SOPEG_RS00530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00530;pseudo=true NZ_CP006568.1 Protein Homology CDS 83726 84928 . + 0 ID=cds103;Parent=gene103;gbkey=CDS;product=MFS transporter;pseudo=true;transl_except=(pos:83843..83845%2Caa:Other),(pos:84629..84631%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 84899 92444 . + . ID=id11;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 85554 86579 . + . ID=gene104;Name=SOPEG_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00535 NZ_CP006568.1 Protein Homology CDS 85554 86579 . + 0 ID=cds104;Parent=gene104;Dbxref=Genbank:WP_025243899.1;Name=WP_025243899.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243899.1;transl_table=11 NZ_CP006568.1 RefSeq gene 86591 87058 . + . ID=gene105;Name=SOPEG_RS00540;end_range=87058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00540;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 86591 87058 . + 0 ID=cds105;Parent=gene105;end_range=87058,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 87282 87833 . - . ID=gene106;Name=SOPEG_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00545;old_locus_tag=SOPEG_0105 NZ_CP006568.1 Protein Homology CDS 87282 87833 . - 0 ID=cds106;Parent=gene106;Dbxref=Genbank:WP_025243901.1;Name=WP_025243901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243901.1;transl_table=11 NZ_CP006568.1 RefSeq gene 88005 88238 . + . ID=gene107;Name=SOPEG_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00550;old_locus_tag=SOPEG_0106 NZ_CP006568.1 Protein Homology CDS 88005 88238 . + 0 ID=cds107;Parent=gene107;Dbxref=Genbank:WP_038469280.1;Name=WP_038469280.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038469280.1;transl_table=11 NZ_CP006568.1 RefSeq gene 88241 90282 . + . ID=gene108;Name=SOPEG_RS00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00555;pseudo=true NZ_CP006568.1 Protein Homology CDS 88241 90282 . + 0 ID=cds108;Parent=gene108;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 90294 91223 . + . ID=gene109;Name=SOPEG_RS00560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00560;pseudo=true NZ_CP006568.1 Protein Homology CDS 90294 91223 . + 0 ID=cds109;Parent=gene109;gbkey=CDS;product=XRE family transcriptional regulator;pseudo=true;transl_except=(pos:90702..90704%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 91220 91450 . + . ID=gene110;Name=SOPEG_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00565 NZ_CP006568.1 GeneMarkS+ CDS 91220 91450 . + 0 ID=cds110;Parent=gene110;Dbxref=Genbank:WP_038467990.1;Name=WP_038467990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038467990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 91443 92366 . - . ID=gene111;Name=SOPEG_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00570;old_locus_tag=SOPEG_0109 NZ_CP006568.1 Protein Homology CDS 91443 92366 . - 0 ID=cds111;Parent=gene111;Dbxref=Genbank:WP_025243904.1;Name=WP_025243904.1;gbkey=CDS;product=transposase;protein_id=WP_025243904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 92638 93057 . + . ID=gene112;Name=SOPEG_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22335;old_locus_tag=SOPEG_ps0110 NZ_CP006568.1 Protein Homology CDS 92638 93057 . + 0 ID=cds112;Parent=gene112;Dbxref=Genbank:WP_051419368.1;Name=WP_051419368.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419368.1;transl_table=11 NZ_CP006568.1 RefSeq gene 93151 93714 . + . ID=gene113;Name=SOPEG_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00580;old_locus_tag=SOPEG_0111 NZ_CP006568.1 Protein Homology CDS 93151 93714 . + 0 ID=cds113;Parent=gene113;Dbxref=Genbank:WP_025243906.1;Name=WP_025243906.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=WP_025243906.1;transl_table=11 NZ_CP006568.1 RefSeq gene 93711 94289 . + . ID=gene114;Name=SOPEG_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00585;old_locus_tag=SOPEG_0112 NZ_CP006568.1 Protein Homology CDS 93711 94289 . + 0 ID=cds114;Parent=gene114;Dbxref=Genbank:WP_025243907.1;Name=WP_025243907.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_025243907.1;transl_table=11 NZ_CP006568.1 RefSeq gene 94258 94809 . + . ID=gene115;Name=SOPEG_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00590;old_locus_tag=SOPEG_0113 NZ_CP006568.1 Protein Homology CDS 94258 94809 . + 0 ID=cds115;Parent=gene115;Dbxref=Genbank:WP_025243908.1;Name=WP_025243908.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=LPS transporter;protein_id=WP_025243908.1;transl_table=11 NZ_CP006568.1 RefSeq gene 94825 95550 . + . ID=gene116;Name=SOPEG_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00595;old_locus_tag=SOPEG_0114 NZ_CP006568.1 Protein Homology CDS 94825 95550 . + 0 ID=cds116;Parent=gene116;Dbxref=Genbank:WP_025243909.1;Name=WP_025243909.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_025243909.1;transl_table=11 NZ_CP006568.1 RefSeq gene 95598 97024 . + . ID=gene117;Name=SOPEG_RS00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00600;pseudo=true NZ_CP006568.1 Protein Homology CDS 95598 97024 . + 0 ID=cds117;Parent=gene117;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;exception=annotated by transcript or proteomic data;gbkey=CDS;product=RNA polymerase factor sigma-54;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 97048 97335 . + . ID=gene118;Name=SOPEG_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00605;old_locus_tag=SOPEG_0116 NZ_CP006568.1 Protein Homology CDS 97048 97335 . + 0 ID=cds118;Parent=gene118;Dbxref=Genbank:WP_025243910.1;Name=WP_025243910.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=ribosome hibernation promoting factor HPF;protein_id=WP_025243910.1;transl_table=11 NZ_CP006568.1 RefSeq gene 97459 97920 . + . ID=gene119;Name=SOPEG_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00610;old_locus_tag=SOPEG_0117 NZ_CP006568.1 Protein Homology CDS 97459 97920 . + 0 ID=cds119;Parent=gene119;Dbxref=Genbank:WP_038467993.1;Name=WP_038467993.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS nitrogen regulatory protein IIA(Ntr);protein_id=WP_038467993.1;transl_table=11 NZ_CP006568.1 RefSeq gene 98014 98886 . + . ID=gene120;Name=SOPEG_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00615;old_locus_tag=SOPEG_0118 NZ_CP006568.1 Protein Homology CDS 98014 98886 . + 0 ID=cds120;Parent=gene120;Dbxref=Genbank:WP_025243912.1;Name=WP_025243912.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_025243912.1;transl_table=11 NZ_CP006568.1 RefSeq gene 98865 99137 . + . ID=gene121;Name=SOPEG_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00620;old_locus_tag=SOPEG_0119 NZ_CP006568.1 Protein Homology CDS 98865 99137 . + 0 ID=cds121;Parent=gene121;Dbxref=Genbank:WP_025243913.1;Name=WP_025243913.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_025243913.1;transl_table=11 NZ_CP006568.1 RefSeq gene 99768 100310 . + . ID=gene122;Name=SOPEG_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00625 NZ_CP006568.1 Protein Homology CDS 99768 100310 . + 0 ID=cds122;Parent=gene122;Dbxref=Genbank:WP_025243914.1;Name=WP_025243914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243914.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 100577 101889 . + . ID=id12;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 100655 101110 . + . ID=gene123;Name=SOPEG_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00630 NZ_CP006568.1 Protein Homology CDS 100655 101110 . + 0 ID=cds123;Parent=gene123;Dbxref=Genbank:WP_025243915.1;Name=WP_025243915.1;gbkey=CDS;product=transposase;protein_id=WP_025243915.1;transl_table=11 NZ_CP006568.1 RefSeq gene 101511 101852 . + . ID=gene124;Name=SOPEG_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00635 NZ_CP006568.1 Protein Homology CDS 101511 101852 . + 0 ID=cds124;Parent=gene124;Dbxref=Genbank:WP_038467997.1;Name=WP_038467997.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038467997.1;transl_table=11 NZ_CP006568.1 RefSeq gene 101863 102318 . - . ID=gene125;Name=SOPEG_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00640 NZ_CP006568.1 Protein Homology CDS 101863 102318 . - 0 ID=cds125;Parent=gene125;Dbxref=Genbank:WP_051419369.1;Name=WP_051419369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419369.1;transl_table=11 NZ_CP006568.1 RefSeq gene 102522 103495 . - . ID=gene126;Name=SOPEG_RS00645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00645;pseudo=true NZ_CP006568.1 Protein Homology CDS 102522 103495 . - 0 ID=cds126;Parent=gene126;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:complement(103398..103400)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 104090 106695 . + . ID=id13;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 104294 105040 . + . ID=gene127;Name=SOPEG_RS00650;end_range=105040,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00650;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 104294 105040 . + 0 ID=cds127;Parent=gene127;end_range=105040,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 105326 105811 . + . ID=gene128;Name=SOPEG_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00655 NZ_CP006568.1 Protein Homology CDS 105326 105811 . + 0 ID=cds128;Parent=gene128;Dbxref=Genbank:WP_051419370.1;Name=WP_051419370.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419370.1;transl_table=11 NZ_CP006568.1 RefSeq gene 105823 106572 . + . ID=gene129;Name=SOPEG_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00660;old_locus_tag=SOPEG_0126 NZ_CP006568.1 Protein Homology CDS 105823 106572 . + 0 ID=cds129;Parent=gene129;Dbxref=Genbank:WP_025243921.1;Name=WP_025243921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 106727 107455 . + . ID=gene130;Name=SOPEG_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22340 NZ_CP006568.1 Protein Homology CDS 106727 107455 . + 0 ID=cds130;Parent=gene130;Dbxref=Genbank:WP_051419371.1;Name=WP_051419371.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419371.1;transl_table=11 NZ_CP006568.1 RefSeq gene 107419 108363 . + . ID=gene131;Name=SOPEG_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22345 NZ_CP006568.1 Protein Homology CDS 107419 108363 . + 0 ID=cds131;Parent=gene131;Dbxref=Genbank:WP_051419372.1;Name=WP_051419372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419372.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 107913 113113 . + . ID=id14;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 108360 108701 . + . ID=gene132;Name=SOPEG_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00670;old_locus_tag=SOPEG_0128 NZ_CP006568.1 Protein Homology CDS 108360 108701 . + 0 ID=cds132;Parent=gene132;Dbxref=Genbank:WP_025243922.1;Name=WP_025243922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243922.1;transl_table=11 NZ_CP006568.1 RefSeq gene 108679 109863 . + . ID=gene133;Name=SOPEG_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00675;old_locus_tag=SOPEG_0129 NZ_CP006568.1 Protein Homology CDS 108679 109863 . + 0 ID=cds133;Parent=gene133;Dbxref=Genbank:WP_025243923.1;Name=WP_025243923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243923.1;transl_table=11 NZ_CP006568.1 RefSeq gene 109856 110422 . + . ID=gene134;Name=SOPEG_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00680;old_locus_tag=SOPEG_0130 NZ_CP006568.1 Protein Homology CDS 109856 110422 . + 0 ID=cds134;Parent=gene134;Dbxref=Genbank:WP_025243924.1;Name=WP_025243924.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243924.1;transl_table=11 NZ_CP006568.1 RefSeq gene 110422 111675 . + . ID=gene135;Name=SOPEG_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00685 NZ_CP006568.1 Protein Homology CDS 110422 111675 . + 0 ID=cds135;Parent=gene135;Dbxref=Genbank:WP_025243925.1;Name=WP_025243925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243925.1;transl_table=11 NZ_CP006568.1 RefSeq gene 111903 112826 . + . ID=gene136;Name=SOPEG_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00690;old_locus_tag=SOPEG_0132 NZ_CP006568.1 Protein Homology CDS 111903 112826 . + 0 ID=cds136;Parent=gene136;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 112819 113133 . - . ID=gene137;Name=SOPEG_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00695 NZ_CP006568.1 GeneMarkS+ CDS 112819 113133 . - 0 ID=cds137;Parent=gene137;Dbxref=Genbank:WP_038468000.1;Name=WP_038468000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468000.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 113193 117621 . + . ID=id15;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 113292 113681 . + . ID=gene138;Name=SOPEG_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00700;old_locus_tag=SOPEG_0134 NZ_CP006568.1 Protein Homology CDS 113292 113681 . + 0 ID=cds138;Parent=gene138;Dbxref=Genbank:WP_038468003.1;Name=WP_038468003.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468003.1;transl_table=11 NZ_CP006568.1 RefSeq gene 113681 114404 . + . ID=gene139;Name=SOPEG_RS00705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00705;pseudo=true NZ_CP006568.1 Protein Homology CDS 113681 114404 . + 0 ID=cds139;Parent=gene139;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:113822..113824%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 114379 114901 . + . ID=gene140;Name=SOPEG_RS00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00710;pseudo=true NZ_CP006568.1 Protein Homology CDS 114379 114901 . + 0 ID=cds140;Parent=gene140;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:114791..114793%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 114906 116562 . + . ID=gene141;Name=SOPEG_RS00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00715;pseudo=true NZ_CP006568.1 Protein Homology CDS 114906 116562 . + 0 ID=cds141;Parent=gene141;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 117315 117527 . + . ID=gene142;Name=SOPEG_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00720;old_locus_tag=SOPEG_0140 NZ_CP006568.1 Protein Homology CDS 117315 117527 . + 0 ID=cds142;Parent=gene142;Dbxref=Genbank:WP_038468006.1;Name=WP_038468006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468006.1;transl_table=11 NZ_CP006568.1 RefSeq gene 117826 118068 . - . ID=gene143;Name=SOPEG_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00725 NZ_CP006568.1 Protein Homology CDS 117826 118068 . - 0 ID=cds143;Parent=gene143;Dbxref=Genbank:WP_025243929.1;Name=WP_025243929.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243929.1;transl_table=11 NZ_CP006568.1 RefSeq gene 118065 118406 . - . ID=gene144;Name=SOPEG_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00730 NZ_CP006568.1 Protein Homology CDS 118065 118406 . - 0 ID=cds144;Parent=gene144;Dbxref=Genbank:WP_038468009.1;Name=WP_038468009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468009.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 118430 119503 . + . ID=id16;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 118520 119444 . + . ID=gene145;Name=SOPEG_RS00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00735;pseudo=true NZ_CP006568.1 Protein Homology CDS 118520 119444 . + 0 ID=cds145;Parent=gene145;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 119656 120807 . + . ID=id17;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 119716 120639 . - . ID=gene146;Name=SOPEG_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00740;old_locus_tag=SOPEG_0145 NZ_CP006568.1 Protein Homology CDS 119716 120639 . - 0 ID=cds146;Parent=gene146;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 121027 121467 . - . ID=gene147;Name=SOPEG_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00745;old_locus_tag=SOPEG_0147 NZ_CP006568.1 Protein Homology CDS 121027 121467 . - 0 ID=cds147;Parent=gene147;Dbxref=Genbank:WP_025243931.1;Name=WP_025243931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243931.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 121027 121188 . + . ID=id18;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 122140 123207 . + . ID=id19;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 122222 123145 . + . ID=gene148;Name=SOPEG_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00750;old_locus_tag=SOPEG_0149 NZ_CP006568.1 Protein Homology CDS 122222 123145 . + 0 ID=cds148;Parent=gene148;Dbxref=Genbank:WP_025243932.1;Name=WP_025243932.1;gbkey=CDS;product=transposase;protein_id=WP_025243932.1;transl_table=11 NZ_CP006568.1 RefSeq gene 123318 123518 . - . ID=gene149;Name=SOPEG_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00755 NZ_CP006568.1 Protein Homology CDS 123318 123518 . - 0 ID=cds149;Parent=gene149;Dbxref=Genbank:WP_051419373.1;Name=WP_051419373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419373.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 123521 125987 . + . ID=id20;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 123580 124503 . - . ID=gene150;Name=SOPEG_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00760;old_locus_tag=SOPEG_0150 NZ_CP006568.1 Protein Homology CDS 123580 124503 . - 0 ID=cds150;Parent=gene150;Dbxref=Genbank:WP_025243933.1;Name=WP_025243933.1;gbkey=CDS;product=transposase;protein_id=WP_025243933.1;transl_table=11 NZ_CP006568.1 RefSeq gene 124738 125733 . + . ID=gene151;Name=SOPEG_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00765 NZ_CP006568.1 Protein Homology CDS 124738 125733 . + 0 ID=cds151;Parent=gene151;Dbxref=Genbank:WP_025243934.1;Name=WP_025243934.1;gbkey=CDS;product=transposase;protein_id=WP_025243934.1;transl_table=11 NZ_CP006568.1 RefSeq gene 125730 125948 . + . ID=gene152;Name=SOPEG_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00770 NZ_CP006568.1 Protein Homology CDS 125730 125948 . + 0 ID=cds152;Parent=gene152;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 126042 126359 . + . ID=gene153;Name=SOPEG_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00775 NZ_CP006568.1 GeneMarkS+ CDS 126042 126359 . + 0 ID=cds153;Parent=gene153;Dbxref=Genbank:WP_038468012.1;Name=WP_038468012.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468012.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 126443 127505 . + . ID=id21;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 126523 127446 . + . ID=gene154;Name=SOPEG_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00780;old_locus_tag=SOPEG_0153 NZ_CP006568.1 Protein Homology CDS 126523 127446 . + 0 ID=cds154;Parent=gene154;Dbxref=Genbank:WP_025243937.1;Name=WP_025243937.1;gbkey=CDS;product=transposase;protein_id=WP_025243937.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 127582 129972 . + . ID=id22;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 127617 128699 . - . ID=gene155;Name=SOPEG_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00785 NZ_CP006568.1 Protein Homology CDS 127617 128699 . - 0 ID=cds155;Parent=gene155;Dbxref=Genbank:WP_025243938.1;Name=WP_025243938.1;gbkey=CDS;product=transposase;protein_id=WP_025243938.1;transl_table=11 NZ_CP006568.1 RefSeq gene 128830 129753 . + . ID=gene156;Name=SOPEG_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00790;old_locus_tag=SOPEG_0155 NZ_CP006568.1 Protein Homology CDS 128830 129753 . + 0 ID=cds156;Parent=gene156;Dbxref=Genbank:WP_025243939.1;Name=WP_025243939.1;gbkey=CDS;product=transposase;protein_id=WP_025243939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 130215 130553 . + . ID=gene157;Name=SOPEG_RS00800;end_range=130553,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00800;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 130215 130553 . + 0 ID=cds157;Parent=gene157;Note=phage-associated protein;end_range=130553,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 130926 131988 . + . ID=id23;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 131005 131928 . + . ID=gene158;Name=SOPEG_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00805;old_locus_tag=SOPEG_0158 NZ_CP006568.1 Protein Homology CDS 131005 131928 . + 0 ID=cds158;Parent=gene158;Dbxref=Genbank:WP_025243942.1;Name=WP_025243942.1;gbkey=CDS;product=transposase;protein_id=WP_025243942.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 132365 133430 . + . ID=id24;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 132427 132567 . - . ID=gene159;Name=SOPEG_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00810 NZ_CP006568.1 Protein Homology CDS 132427 132567 . - 0 ID=cds159;Parent=gene159;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 132773 133190 . - . ID=gene160;Name=SOPEG_RS00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00815;pseudo=true NZ_CP006568.1 Protein Homology CDS 132773 133190 . - 0 ID=cds160;Parent=gene160;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(132955..132957)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 134679 135741 . + . ID=id25;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 134757 135680 . + . ID=gene161;Name=SOPEG_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00825;old_locus_tag=SOPEG_0160 NZ_CP006568.1 Protein Homology CDS 134757 135680 . + 0 ID=cds161;Parent=gene161;Dbxref=Genbank:WP_025243945.1;Name=WP_025243945.1;gbkey=CDS;product=transposase;protein_id=WP_025243945.1;transl_table=11 NZ_CP006568.1 RefSeq gene 135823 136809 . - . ID=gene162;Name=SOPEG_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00830;old_locus_tag=SOPEG_0161 NZ_CP006568.1 Protein Homology CDS 135823 136809 . - 0 ID=cds162;Parent=gene162;Dbxref=Genbank:WP_025246990.1;Name=WP_025246990.1;gbkey=CDS;product=D-arabinose 5-phosphate isomerase;protein_id=WP_025246990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 136843 137793 . - . ID=gene163;Name=SOPEG_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00835;old_locus_tag=SOPEG_0162 NZ_CP006568.1 Protein Homology CDS 136843 137793 . - 0 ID=cds163;Parent=gene163;Dbxref=Genbank:WP_038468016.1;Name=WP_038468016.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_038468016.1;transl_table=11 NZ_CP006568.1 RefSeq gene 138042 138851 . + . ID=gene164;Name=SOPEG_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00840;old_locus_tag=SOPEG_0163 NZ_CP006568.1 Protein Homology CDS 138042 138851 . + 0 ID=cds164;Parent=gene164;Dbxref=Genbank:WP_025243946.1;Name=WP_025243946.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_025243946.1;transl_table=11 NZ_CP006568.1 RefSeq gene 138860 139642 . + . ID=gene165;Name=SOPEG_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00845;old_locus_tag=SOPEG_0164 NZ_CP006568.1 Protein Homology CDS 138860 139642 . + 0 ID=cds165;Parent=gene165;Dbxref=Genbank:WP_025243947.1;Name=WP_025243947.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025243947.1;transl_table=11 NZ_CP006568.1 RefSeq gene 139647 140168 . + . ID=gene166;Name=SOPEG_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00850;old_locus_tag=SOPEG_0165 NZ_CP006568.1 Protein Homology CDS 139647 140168 . + 0 ID=cds166;Parent=gene166;Dbxref=Genbank:WP_025243948.1;Name=WP_025243948.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_025243948.1;transl_table=11 NZ_CP006568.1 RefSeq gene 140317 140952 . + . ID=gene167;Name=SOPEG_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00855;old_locus_tag=SOPEG_0166 NZ_CP006568.1 Protein Homology CDS 140317 140952 . + 0 ID=cds167;Parent=gene167;Dbxref=Genbank:WP_025243949.1;Name=WP_025243949.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_025243949.1;transl_table=11 NZ_CP006568.1 RefSeq gene 140945 141253 . + . ID=gene168;Name=SOPEG_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00860;old_locus_tag=SOPEG_0167 NZ_CP006568.1 Protein Homology CDS 140945 141253 . + 0 ID=cds168;Parent=gene168;Dbxref=Genbank:WP_025243950.1;Name=WP_025243950.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_025243950.1;transl_table=11 NZ_CP006568.1 RefSeq gene 141380 141634 . + . ID=gene169;Name=SOPEG_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00865;old_locus_tag=SOPEG_0168 NZ_CP006568.1 Protein Homology CDS 141380 141634 . + 0 ID=cds169;Parent=gene169;Dbxref=Genbank:WP_025243951.1;Name=WP_025243951.1;gbkey=CDS;product=cell division protein BolA;protein_id=WP_025243951.1;transl_table=11 NZ_CP006568.1 RefSeq gene 141686 142945 . + . ID=gene170;Name=SOPEG_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00870;old_locus_tag=SOPEG_0169 NZ_CP006568.1 Protein Homology CDS 141686 142945 . + 0 ID=cds170;Parent=gene170;Dbxref=Genbank:WP_025243952.1;Name=WP_025243952.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_025243952.1;transl_table=11 NZ_CP006568.1 RefSeq gene 143061 144122 . - . ID=gene171;Name=SOPEG_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00875;old_locus_tag=SOPEG_0170 NZ_CP006568.1 Protein Homology CDS 143061 144122 . - 0 ID=cds171;Parent=gene171;Dbxref=Genbank:WP_025243953.1;Name=WP_025243953.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_025243953.1;transl_table=11 NZ_CP006568.1 RefSeq gene 144209 145579 . - . ID=gene172;Name=SOPEG_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00880;old_locus_tag=SOPEG_0171 NZ_CP006568.1 Protein Homology CDS 144209 145579 . - 0 ID=cds172;Parent=gene172;Dbxref=Genbank:WP_025243954.1;Name=WP_025243954.1;gbkey=CDS;product=serine endoprotease DegQ;protein_id=WP_025243954.1;transl_table=11 NZ_CP006568.1 RefSeq gene 145725 146129 . - . ID=gene173;Name=SOPEG_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00885;old_locus_tag=SOPEG_0172 NZ_CP006568.1 Protein Homology CDS 145725 146129 . - 0 ID=cds173;Parent=gene173;Dbxref=Genbank:WP_025243955.1;Name=WP_025243955.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit III;protein_id=WP_025243955.1;transl_table=11 NZ_CP006568.1 RefSeq gene 146340 147479 . + . ID=gene174;Name=SOPEG_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00890;old_locus_tag=SOPEG_0173 NZ_CP006568.1 Protein Homology CDS 146340 147479 . + 0 ID=cds174;Parent=gene174;Dbxref=Genbank:WP_025243956.1;Name=WP_025243956.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243956.1;transl_table=11 NZ_CP006568.1 RefSeq gene 147691 148119 . + . ID=gene175;Name=SOPEG_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00895;old_locus_tag=SOPEG_0174 NZ_CP006568.1 Protein Homology CDS 147691 148119 . + 0 ID=cds175;Parent=gene175;Dbxref=Genbank:WP_011410080.1;Name=WP_011410080.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_011410080.1;transl_table=11 NZ_CP006568.1 RefSeq gene 148135 148527 . + . ID=gene176;Name=SOPEG_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00900;old_locus_tag=SOPEG_0175 NZ_CP006568.1 Protein Homology CDS 148135 148527 . + 0 ID=cds176;Parent=gene176;Dbxref=Genbank:WP_011410081.1;Name=WP_011410081.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_011410081.1;transl_table=11 NZ_CP006568.1 RefSeq gene 148856 149497 . + . ID=gene177;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=SOPEG_RS00905;old_locus_tag=SOPEG_0176 NZ_CP006568.1 Protein Homology CDS 148856 149497 . + 0 ID=cds177;Parent=gene177;Dbxref=Genbank:WP_025243957.1;Name=WP_025243957.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_025243957.1;transl_table=11 NZ_CP006568.1 RefSeq gene 149502 149981 . + . ID=gene178;Name=SOPEG_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00910;old_locus_tag=SOPEG_0177 NZ_CP006568.1 Protein Homology CDS 149502 149981 . + 0 ID=cds178;Parent=gene178;Dbxref=Genbank:WP_025243958.1;Name=WP_025243958.1;gbkey=CDS;product=Clp protease ClpP;protein_id=WP_025243958.1;transl_table=11 NZ_CP006568.1 RefSeq gene 150146 151564 . - . ID=gene179;Name=SOPEG_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00915;old_locus_tag=SOPEG_0178 NZ_CP006568.1 Protein Homology CDS 150146 151564 . - 0 ID=cds179;Parent=gene179;Dbxref=Genbank:WP_025243959.1;Name=WP_025243959.1;gbkey=CDS;product=glutamate synthase;protein_id=WP_025243959.1;transl_table=11 NZ_CP006568.1 RefSeq gene 151575 156031 . - . ID=gene180;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=pseudogene;locus_tag=SOPEG_RS00920;pseudo=true NZ_CP006568.1 Protein Homology CDS 151575 156031 . - 0 ID=cds180;Parent=gene180;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=gltB;product=glutamate synthase;pseudo=true;transl_except=(pos:complement(154764..154766)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 156724 157666 . + . ID=gene181;Name=SOPEG_RS00925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00925;pseudo=true NZ_CP006568.1 Protein Homology CDS 156724 157666 . + 0 ID=cds181;Parent=gene181;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 157964 160306 . + . ID=gene182;Name=SOPEG_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00930;old_locus_tag=SOPEG_0181 NZ_CP006568.1 Protein Homology CDS 157964 160306 . + 0 ID=cds182;Parent=gene182;Dbxref=Genbank:WP_025243960.1;Name=WP_025243960.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_025243960.1;transl_table=11 NZ_CP006568.1 RefSeq gene 160538 161191 . + . ID=gene183;Name=SOPEG_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00935;old_locus_tag=SOPEG_0182 NZ_CP006568.1 Protein Homology CDS 160538 161191 . + 0 ID=cds183;Parent=gene183;Dbxref=Genbank:WP_025243961.1;Name=WP_025243961.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_025243961.1;transl_table=11 NZ_CP006568.1 RefSeq gene 161188 161865 . + . ID=gene184;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=SOPEG_RS00940;old_locus_tag=SOPEG_0183 NZ_CP006568.1 Protein Homology CDS 161188 161865 . + 0 ID=cds184;Parent=gene184;Dbxref=Genbank:WP_025243962.1;Name=WP_025243962.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=peptidoglycan transglycosylase;protein_id=WP_025243962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 161899 162474 . - . ID=gene185;Name=SOPEG_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00945;old_locus_tag=SOPEG_0184 NZ_CP006568.1 Protein Homology CDS 161899 162474 . - 0 ID=cds185;Parent=gene185;Dbxref=Genbank:WP_025243963.1;Name=WP_025243963.1;gbkey=CDS;product=membrane protein;protein_id=WP_025243963.1;transl_table=11 NZ_CP006568.1 RefSeq gene 162484 163074 . - . ID=gene186;Name=SOPEG_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00950;old_locus_tag=SOPEG_0185 NZ_CP006568.1 Protein Homology CDS 162484 163074 . - 0 ID=cds186;Parent=gene186;Dbxref=Genbank:WP_025243964.1;Name=WP_025243964.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_025243964.1;transl_table=11 NZ_CP006568.1 RefSeq gene 163267 164864 . - . ID=gene187;Name=SOPEG_RS00955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00955;pseudo=true NZ_CP006568.1 Protein Homology CDS 163267 164864 . - 0 ID=cds187;Parent=gene187;exception=annotated by transcript or proteomic data;gbkey=CDS;product=penicillin-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 164831 165697 . + . ID=gene188;Name=SOPEG_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00960;old_locus_tag=SOPEG_0187 NZ_CP006568.1 Protein Homology CDS 164831 165697 . + 0 ID=cds188;Parent=gene188;Dbxref=Genbank:WP_038468022.1;Name=WP_038468022.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_038468022.1;transl_table=11 NZ_CP006568.1 RefSeq gene 165773 166150 . + . ID=gene189;Name=SOPEG_RS23655;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=SOPEG_RS23655 NZ_CP006568.1 cmsearch ncRNA 165773 166150 . + . ID=rna0;Parent=gene189;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NZ_CP006568.1 cmsearch exon 165773 166150 . + . ID=id26;Parent=rna0;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NZ_CP006568.1 RefSeq gene 166213 166941 . - . ID=gene190;Name=SOPEG_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00965;old_locus_tag=SOPEG_0188 NZ_CP006568.1 Protein Homology CDS 166213 166941 . - 0 ID=cds189;Parent=gene190;Dbxref=Genbank:WP_025243965.1;Name=WP_025243965.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243965.1;transl_table=11 NZ_CP006568.1 RefSeq gene 167051 167941 . + . ID=gene191;Name=SOPEG_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00970;old_locus_tag=SOPEG_0189 NZ_CP006568.1 Protein Homology CDS 167051 167941 . + 0 ID=cds190;Parent=gene191;Dbxref=Genbank:WP_025243966.1;Name=WP_025243966.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_025243966.1;transl_table=11 NZ_CP006568.1 RefSeq gene 168026 169005 . - . ID=gene192;Name=SOPEG_RS00975;end_range=169005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS00975;old_locus_tag=SOPEG_0190;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 168026 169005 . - 0 ID=cds191;Parent=gene192;end_range=169005,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=glutathionyl-hydroquinone reductase YqjG;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 169223 169618 . - . ID=gene193;Name=SOPEG_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00980;old_locus_tag=SOPEG_0191 NZ_CP006568.1 Protein Homology CDS 169223 169618 . - 0 ID=cds192;Parent=gene193;Dbxref=Genbank:WP_025243967.1;Name=WP_025243967.1;gbkey=CDS;product=membrane protein;protein_id=WP_025243967.1;transl_table=11 NZ_CP006568.1 RefSeq gene 169845 170450 . + . ID=gene194;Name=SOPEG_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00985;old_locus_tag=SOPEG_0192 NZ_CP006568.1 Protein Homology CDS 169845 170450 . + 0 ID=cds193;Parent=gene194;Dbxref=Genbank:WP_025243968.1;Name=WP_025243968.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_025243968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 170554 171237 . + . ID=gene195;Name=SOPEG_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00990;old_locus_tag=SOPEG_0193 NZ_CP006568.1 Protein Homology CDS 170554 171237 . + 0 ID=cds194;Parent=gene195;Dbxref=Genbank:WP_025243969.1;Name=WP_025243969.1;gbkey=CDS;product=dimethylallyltransferase;protein_id=WP_025243969.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 171297 175342 . + . ID=id27;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 171373 171990 . + . ID=gene196;Name=SOPEG_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS00995 NZ_CP006568.1 Protein Homology CDS 171373 171990 . + 0 ID=cds195;Parent=gene196;Dbxref=Genbank:WP_025243970.1;Name=WP_025243970.1;gbkey=CDS;product=transposase;protein_id=WP_025243970.1;transl_table=11 NZ_CP006568.1 RefSeq gene 172013 172582 . + . ID=gene197;Name=SOPEG_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01000 NZ_CP006568.1 Protein Homology CDS 172013 172582 . + 0 ID=cds196;Parent=gene197;Dbxref=Genbank:WP_025243971.1;Name=WP_025243971.1;gbkey=CDS;product=transposase;protein_id=WP_025243971.1;transl_table=11 NZ_CP006568.1 RefSeq gene 173551 173838 . - . ID=gene198;Name=SOPEG_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01005;old_locus_tag=SOPEG_0196 NZ_CP006568.1 Protein Homology CDS 173551 173838 . - 0 ID=cds197;Parent=gene198;Dbxref=Genbank:WP_025243973.1;Name=WP_025243973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243973.1;transl_table=11 NZ_CP006568.1 RefSeq gene 173928 174308 . - . ID=gene199;Name=SOPEG_RS01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01010;old_locus_tag=SOPEG_0197;partial=true;pseudo=true;start_range=.,173928 NZ_CP006568.1 Protein Homology CDS 173928 174308 . - 0 ID=cds198;Parent=gene199;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,173928;transl_table=11 NZ_CP006568.1 RefSeq gene 174314 174619 . - . ID=gene200;Name=SOPEG_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01015;old_locus_tag=SOPEG_0198 NZ_CP006568.1 Protein Homology CDS 174314 174619 . - 0 ID=cds199;Parent=gene200;Dbxref=Genbank:WP_025243975.1;Name=WP_025243975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243975.1;transl_table=11 NZ_CP006568.1 RefSeq gene 175048 175434 . - . ID=gene201;Name=SOPEG_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01020;old_locus_tag=SOPEG_0199 NZ_CP006568.1 Protein Homology CDS 175048 175434 . - 0 ID=cds200;Parent=gene201;Dbxref=Genbank:WP_051419374.1;Name=WP_051419374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419374.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 175350 181669 . + . ID=id28;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 175434 176105 . - . ID=gene202;Name=SOPEG_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01025;old_locus_tag=SOPEG_0200 NZ_CP006568.1 Protein Homology CDS 175434 176105 . - 0 ID=cds201;Parent=gene202;Dbxref=Genbank:WP_025243977.1;Name=WP_025243977.1;gbkey=CDS;product=membrane protein;protein_id=WP_025243977.1;transl_table=11 NZ_CP006568.1 RefSeq gene 176137 176511 . - . ID=gene203;Name=SOPEG_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01030 NZ_CP006568.1 GeneMarkS+ CDS 176137 176511 . - 0 ID=cds202;Parent=gene203;Dbxref=Genbank:WP_025243978.1;Name=WP_025243978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243978.1;transl_table=11 NZ_CP006568.1 RefSeq gene 176969 177514 . + . ID=gene204;Name=SOPEG_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01035 NZ_CP006568.1 Protein Homology CDS 176969 177514 . + 0 ID=cds203;Parent=gene204;Dbxref=Genbank:WP_051419375.1;Name=WP_051419375.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419375.1;transl_table=11 NZ_CP006568.1 RefSeq gene 177680 178888 . - . ID=gene205;Name=SOPEG_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01040;old_locus_tag=SOPEG_0203 NZ_CP006568.1 Protein Homology CDS 177680 178888 . - 0 ID=cds204;Parent=gene205;Dbxref=Genbank:WP_025243979.1;Name=WP_025243979.1;gbkey=CDS;product=transposase;protein_id=WP_025243979.1;transl_table=11 NZ_CP006568.1 RefSeq gene 179183 179932 . - . ID=gene206;Name=SOPEG_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01045;old_locus_tag=SOPEG_0204 NZ_CP006568.1 Protein Homology CDS 179183 179932 . - 0 ID=cds205;Parent=gene206;Dbxref=Genbank:WP_025243980.1;Name=WP_025243980.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243980.1;transl_table=11 NZ_CP006568.1 RefSeq gene 179944 181461 . - . ID=gene207;Name=SOPEG_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01050;old_locus_tag=SOPEG_0205 NZ_CP006568.1 Protein Homology CDS 179944 181461 . - 0 ID=cds206;Parent=gene207;Dbxref=Genbank:WP_025243981.1;Name=WP_025243981.1;gbkey=CDS;product=transposase;protein_id=WP_025243981.1;transl_table=11 NZ_CP006568.1 RefSeq gene 181588 181845 . - . ID=gene208;Name=SOPEG_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01055 NZ_CP006568.1 Protein Homology CDS 181588 181845 . - 0 ID=cds207;Parent=gene208;Dbxref=Genbank:WP_025243982.1;Name=WP_025243982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243982.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 181957 183603 . + . ID=id29;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 182020 182943 . - . ID=gene209;Name=SOPEG_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01060;old_locus_tag=SOPEG_0207 NZ_CP006568.1 Protein Homology CDS 182020 182943 . - 0 ID=cds208;Parent=gene209;Dbxref=Genbank:WP_025243983.1;Name=WP_025243983.1;gbkey=CDS;product=transposase;protein_id=WP_025243983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 183004 183273 . - . ID=gene210;Name=SOPEG_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01065 NZ_CP006568.1 Protein Homology CDS 183004 183273 . - 0 ID=cds209;Parent=gene210;Dbxref=Genbank:WP_025243984.1;Name=WP_025243984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243984.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 183639 185725 . + . ID=id30;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 183697 184620 . - . ID=gene211;Name=SOPEG_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01070;old_locus_tag=SOPEG_0209 NZ_CP006568.1 Protein Homology CDS 183697 184620 . - 0 ID=cds210;Parent=gene211;Dbxref=Genbank:WP_025243985.1;Name=WP_025243985.1;gbkey=CDS;product=transposase;protein_id=WP_025243985.1;transl_table=11 NZ_CP006568.1 RefSeq gene 184723 185646 . - . ID=gene212;Name=SOPEG_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01075;old_locus_tag=SOPEG_0210 NZ_CP006568.1 Protein Homology CDS 184723 185646 . - 0 ID=cds211;Parent=gene212;Dbxref=Genbank:WP_025243986.1;Name=WP_025243986.1;gbkey=CDS;product=transposase;protein_id=WP_025243986.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 185782 188535 . + . ID=id31;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 185864 186787 . + . ID=gene213;Name=SOPEG_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01080;old_locus_tag=SOPEG_0211 NZ_CP006568.1 Protein Homology CDS 185864 186787 . + 0 ID=cds212;Parent=gene213;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 187846 188094 . + . ID=gene214;Name=SOPEG_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22350 NZ_CP006568.1 Protein Homology CDS 187846 188094 . + 0 ID=cds213;Parent=gene214;Dbxref=Genbank:WP_051419376.1;Name=WP_051419376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419376.1;transl_table=11 NZ_CP006568.1 RefSeq gene 188179 188424 . + . ID=gene215;Name=SOPEG_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22355 NZ_CP006568.1 Protein Homology CDS 188179 188424 . + 0 ID=cds214;Parent=gene215;Dbxref=Genbank:WP_051419377.1;Name=WP_051419377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 188575 189210 . - . ID=gene216;Name=SOPEG_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01090 NZ_CP006568.1 Protein Homology CDS 188575 189210 . - 0 ID=cds215;Parent=gene216;Dbxref=Genbank:WP_025243988.1;Name=WP_025243988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243988.1;transl_table=11 NZ_CP006568.1 RefSeq gene 189947 190720 . + . ID=gene217;Name=SOPEG_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01095 NZ_CP006568.1 Protein Homology CDS 189947 190720 . + 0 ID=cds216;Parent=gene217;Dbxref=Genbank:WP_038468026.1;Name=WP_038468026.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468026.1;transl_table=11 NZ_CP006568.1 RefSeq gene 191355 191555 . - . ID=gene218;Name=SOPEG_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01100 NZ_CP006568.1 GeneMarkS+ CDS 191355 191555 . - 0 ID=cds217;Parent=gene218;Dbxref=Genbank:WP_025243990.1;Name=WP_025243990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 191752 192783 . + . ID=gene219;Name=SOPEG_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01105 NZ_CP006568.1 GeneMarkS+ CDS 191752 192783 . + 0 ID=cds218;Parent=gene219;Dbxref=Genbank:WP_025243991.1;Name=WP_025243991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243991.1;transl_table=11 NZ_CP006568.1 RefSeq gene 193443 194078 . + . ID=gene220;Name=SOPEG_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01110 NZ_CP006568.1 GeneMarkS+ CDS 193443 194078 . + 0 ID=cds219;Parent=gene220;Dbxref=Genbank:WP_038468029.1;Name=WP_038468029.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468029.1;transl_table=11 NZ_CP006568.1 RefSeq gene 194091 195065 . + . ID=gene221;Name=SOPEG_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01115 NZ_CP006568.1 GeneMarkS+ CDS 194091 195065 . + 0 ID=cds220;Parent=gene221;Dbxref=Genbank:WP_025243993.1;Name=WP_025243993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243993.1;transl_table=11 NZ_CP006568.1 RefSeq gene 195149 195583 . - . ID=gene222;Name=SOPEG_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01120;old_locus_tag=SOPEG_0216 NZ_CP006568.1 Protein Homology CDS 195149 195583 . - 0 ID=cds221;Parent=gene222;Dbxref=Genbank:WP_025243994.1;Name=WP_025243994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243994.1;transl_table=11 NZ_CP006568.1 RefSeq gene 195928 196872 . + . ID=gene223;Name=SOPEG_RS01125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01125;pseudo=true NZ_CP006568.1 Protein Homology CDS 195928 196872 . + 0 ID=cds222;Parent=gene223;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 197296 197682 . + . ID=gene224;Name=SOPEG_RS01130;end_range=197682,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01130;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 197296 197682 . + 0 ID=cds223;Parent=gene224;end_range=197682,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 197694 200575 . + . ID=id32;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 197803 198048 . - . ID=gene225;Name=SOPEG_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22360 NZ_CP006568.1 Protein Homology CDS 197803 198048 . - 0 ID=cds224;Parent=gene225;Dbxref=Genbank:WP_025243996.1;Name=WP_025243996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243996.1;transl_table=11 NZ_CP006568.1 RefSeq gene 198048 198296 . + . ID=gene226;Name=SOPEG_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22365 NZ_CP006568.1 GeneMarkS+ CDS 198048 198296 . + 0 ID=cds225;Parent=gene226;Dbxref=Genbank:WP_025243997.1;Name=WP_025243997.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243997.1;transl_table=11 NZ_CP006568.1 RefSeq gene 199274 199531 . + . ID=gene227;Name=SOPEG_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01140 NZ_CP006568.1 GeneMarkS+ CDS 199274 199531 . + 0 ID=cds226;Parent=gene227;Dbxref=Genbank:WP_025243998.1;Name=WP_025243998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025243998.1;transl_table=11 NZ_CP006568.1 RefSeq gene 199592 200515 . + . ID=gene228;Name=SOPEG_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01145;old_locus_tag=SOPEG_0221 NZ_CP006568.1 Protein Homology CDS 199592 200515 . + 0 ID=cds227;Parent=gene228;Dbxref=Genbank:WP_025243999.1;Name=WP_025243999.1;gbkey=CDS;product=transposase;protein_id=WP_025243999.1;transl_table=11 NZ_CP006568.1 RefSeq gene 200634 201311 . + . ID=gene229;Name=SOPEG_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01150 NZ_CP006568.1 Protein Homology CDS 200634 201311 . + 0 ID=cds228;Parent=gene229;Dbxref=Genbank:WP_051419378.1;Name=WP_051419378.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419378.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 200701 200881 . + . ID=id33;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 200885 213719 . + . ID=id34;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 201339 202329 . + . ID=gene230;Name=SOPEG_RS01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01155;pseudo=true NZ_CP006568.1 Protein Homology CDS 201339 202329 . + 0 ID=cds229;Parent=gene230;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:201663..201665%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 202346 203124 . - . ID=gene231;Name=SOPEG_RS01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01160;pseudo=true NZ_CP006568.1 Protein Homology CDS 202346 203124 . - 0 ID=cds230;Parent=gene231;Note=regulates the expression of uxuBA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 203385 204674 . - . ID=gene232;Name=SOPEG_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01165;old_locus_tag=SOPEG_0225 NZ_CP006568.1 Protein Homology CDS 203385 204674 . - 0 ID=cds231;Parent=gene232;Dbxref=Genbank:WP_025244003.1;Name=WP_025244003.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter;protein_id=WP_025244003.1;transl_table=11 NZ_CP006568.1 RefSeq gene 205192 205686 . + . ID=gene233;Name=SOPEG_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01170 NZ_CP006568.1 Protein Homology CDS 205192 205686 . + 0 ID=cds232;Parent=gene233;Dbxref=Genbank:WP_025244004.1;Name=WP_025244004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244004.1;transl_table=11 NZ_CP006568.1 RefSeq gene 205884 206435 . - . ID=gene234;Name=SOPEG_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22370;old_locus_tag=SOPEG_0227 NZ_CP006568.1 Protein Homology CDS 205884 206435 . - 0 ID=cds233;Parent=gene234;Dbxref=Genbank:WP_025244005.1;Name=WP_025244005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244005.1;transl_table=11 NZ_CP006568.1 RefSeq gene 206607 206840 . + . ID=gene235;Name=SOPEG_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01180;old_locus_tag=SOPEG_0228 NZ_CP006568.1 Protein Homology CDS 206607 206840 . + 0 ID=cds234;Parent=gene235;Dbxref=Genbank:WP_038469328.1;Name=WP_038469328.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038469328.1;transl_table=11 NZ_CP006568.1 RefSeq gene 206843 208885 . + . ID=gene236;Name=SOPEG_RS01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01185;pseudo=true NZ_CP006568.1 Protein Homology CDS 206843 208885 . + 0 ID=cds235;Parent=gene236;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:208475..208477%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 208897 209826 . + . ID=gene237;Name=SOPEG_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01190;old_locus_tag=SOPEG_0230 NZ_CP006568.1 Protein Homology CDS 208897 209826 . + 0 ID=cds236;Parent=gene237;Dbxref=Genbank:WP_025244007.1;Name=WP_025244007.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025244007.1;transl_table=11 NZ_CP006568.1 RefSeq gene 209823 210128 . + . ID=gene238;Name=SOPEG_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01195 NZ_CP006568.1 Protein Homology CDS 209823 210128 . + 0 ID=cds237;Parent=gene238;Dbxref=Genbank:WP_051419379.1;Name=WP_051419379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419379.1;transl_table=11 NZ_CP006568.1 RefSeq gene 210317 210559 . + . ID=gene239;Name=SOPEG_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01200 NZ_CP006568.1 Protein Homology CDS 210317 210559 . + 0 ID=cds238;Parent=gene239;Dbxref=Genbank:WP_025244009.1;Name=WP_025244009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244009.1;transl_table=11 NZ_CP006568.1 RefSeq gene 210620 211543 . + . ID=gene240;Name=SOPEG_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01205;old_locus_tag=SOPEG_0233 NZ_CP006568.1 Protein Homology CDS 210620 211543 . + 0 ID=cds239;Parent=gene240;Dbxref=Genbank:WP_025244010.1;Name=WP_025244010.1;gbkey=CDS;product=transposase;protein_id=WP_025244010.1;transl_table=11 NZ_CP006568.1 RefSeq gene 212602 212850 . + . ID=gene241;Name=SOPEG_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22375 NZ_CP006568.1 Protein Homology CDS 212602 212850 . + 0 ID=cds240;Parent=gene241;Dbxref=Genbank:WP_051419380.1;Name=WP_051419380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419380.1;transl_table=11 NZ_CP006568.1 RefSeq gene 212935 213180 . + . ID=gene242;Name=SOPEG_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22380 NZ_CP006568.1 Protein Homology CDS 212935 213180 . + 0 ID=cds241;Parent=gene242;Dbxref=Genbank:WP_051419377.1;Name=WP_051419377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 213276 213596 . + . ID=gene243;Name=SOPEG_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01215 NZ_CP006568.1 Protein Homology CDS 213276 213596 . + 0 ID=cds242;Parent=gene243;Dbxref=Genbank:WP_051419381.1;Name=WP_051419381.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419381.1;transl_table=11 NZ_CP006568.1 RefSeq gene 213947 215131 . - . ID=gene244;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SOPEG_RS01220;old_locus_tag=SOPEG_0236 NZ_CP006568.1 Protein Homology CDS 213947 215131 . - 0 ID=cds243;Parent=gene244;Dbxref=Genbank:WP_025244013.1;Name=WP_025244013.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_025244013.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 213952 215130 . + . ID=id35;gbkey=repeat_region;gene=tuf NZ_CP006568.1 RefSeq gene 215203 217308 . - . ID=gene245;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SOPEG_RS01225;old_locus_tag=SOPEG_0237 NZ_CP006568.1 Protein Homology CDS 215203 217308 . - 0 ID=cds244;Parent=gene245;Dbxref=Genbank:WP_025244014.1;Name=WP_025244014.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_025244014.1;transl_table=11 NZ_CP006568.1 RefSeq gene 217403 217873 . - . ID=gene246;Name=SOPEG_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01230;old_locus_tag=SOPEG_0238 NZ_CP006568.1 Protein Homology CDS 217403 217873 . - 0 ID=cds245;Parent=gene246;Dbxref=Genbank:WP_011412093.1;Name=WP_011412093.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_011412093.1;transl_table=11 NZ_CP006568.1 RefSeq gene 217968 218342 . - . ID=gene247;Name=SOPEG_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01235;old_locus_tag=SOPEG_0239 NZ_CP006568.1 Protein Homology CDS 217968 218342 . - 0 ID=cds246;Parent=gene247;Dbxref=Genbank:WP_025244015.1;Name=WP_025244015.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_025244015.1;transl_table=11 NZ_CP006568.1 RefSeq gene 218476 218763 . - . ID=gene248;Name=SOPEG_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01240;old_locus_tag=SOPEG_0240 NZ_CP006568.1 Protein Homology CDS 218476 218763 . - 0 ID=cds247;Parent=gene248;Dbxref=Genbank:WP_025244016.1;Name=WP_025244016.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfur transfer complex subunit TusB;protein_id=WP_025244016.1;transl_table=11 NZ_CP006568.1 RefSeq gene 218779 219138 . - . ID=gene249;Name=SOPEG_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01245;old_locus_tag=SOPEG_0241 NZ_CP006568.1 Protein Homology CDS 218779 219138 . - 0 ID=cds248;Parent=gene249;Dbxref=Genbank:WP_025244017.1;Name=WP_025244017.1;gbkey=CDS;product=protein TusC;protein_id=WP_025244017.1;transl_table=11 NZ_CP006568.1 RefSeq gene 219146 219517 . - . ID=gene250;Name=SOPEG_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01250;old_locus_tag=SOPEG_0242 NZ_CP006568.1 Protein Homology CDS 219146 219517 . - 0 ID=cds249;Parent=gene250;Dbxref=Genbank:WP_038469337.1;Name=WP_038469337.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfur transfer complex subunit TusD;protein_id=WP_038469337.1;transl_table=11 NZ_CP006568.1 RefSeq gene 219535 220258 . - . ID=gene251;Name=SOPEG_RS01255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01255;pseudo=true NZ_CP006568.1 Protein Homology CDS 219535 220258 . - 0 ID=cds250;Parent=gene251;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 220533 221321 . - . ID=gene252;Name=SOPEG_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01260;old_locus_tag=SOPEG_0244 NZ_CP006568.1 Protein Homology CDS 220533 221321 . - 0 ID=cds251;Parent=gene252;Dbxref=Genbank:WP_025244019.1;Name=WP_025244019.1;Note=rotamase;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_025244019.1;transl_table=11 NZ_CP006568.1 RefSeq gene 221643 221861 . + . ID=gene253;Name=SOPEG_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01265;old_locus_tag=SOPEG_0245 NZ_CP006568.1 Protein Homology CDS 221643 221861 . + 0 ID=cds252;Parent=gene253;Dbxref=Genbank:WP_025244020.1;Name=WP_025244020.1;Note=required for phi X174 lysis;gbkey=CDS;product=phi X174 lysis protein;protein_id=WP_025244020.1;transl_table=11 NZ_CP006568.1 RefSeq gene 221911 222423 . - . ID=gene254;Name=SOPEG_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01270;old_locus_tag=SOPEG_0246 NZ_CP006568.1 Protein Homology CDS 221911 222423 . - 0 ID=cds253;Parent=gene254;Dbxref=Genbank:WP_025244021.1;Name=WP_025244021.1;Note=rotamase;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_025244021.1;transl_table=11 NZ_CP006568.1 RefSeq gene 222517 222720 . - . ID=gene255;Name=SOPEG_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01275;old_locus_tag=SOPEG_0247 NZ_CP006568.1 Protein Homology CDS 222517 222720 . - 0 ID=cds254;Parent=gene255;Dbxref=Genbank:WP_025244022.1;Name=WP_025244022.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025244022.1;transl_table=11 NZ_CP006568.1 RefSeq gene 222704 224530 . - . ID=gene256;Name=SOPEG_RS01280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01280;pseudo=true NZ_CP006568.1 Protein Homology CDS 222704 224530 . - 0 ID=cds255;Parent=gene256;Note=involved in potassium efflux;exception=annotated by transcript or proteomic data;gbkey=CDS;product=potassium transporter KefB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 224520 225070 . - . ID=gene257;Name=SOPEG_RS01285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01285;pseudo=true NZ_CP006568.1 Protein Homology CDS 224520 225070 . - 0 ID=cds256;Parent=gene257;Note=required for KefB activity;exception=annotated by transcript or proteomic data;gbkey=CDS;product=potassium transporter KefG;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 225201 225779 . + . ID=gene258;Name=SOPEG_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01290 NZ_CP006568.1 Protein Homology CDS 225201 225779 . + 0 ID=cds257;Parent=gene258;Dbxref=Genbank:WP_025244023.1;Name=WP_025244023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244023.1;transl_table=11 NZ_CP006568.1 RefSeq gene 226442 227326 . + . ID=gene259;Name=SOPEG_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01295 NZ_CP006568.1 Protein Homology CDS 226442 227326 . + 0 ID=cds258;Parent=gene259;Dbxref=Genbank:WP_051419983.1;Name=WP_051419983.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_051419983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 227433 227832 . - . ID=gene260;Name=SOPEG_RS01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01300;pseudo=true NZ_CP006568.1 Protein Homology CDS 227433 227832 . - 0 ID=cds259;Parent=gene260;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 228150 228782 . + . ID=gene261;Name=SOPEG_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01305;old_locus_tag=SOPEG_0253 NZ_CP006568.1 Protein Homology CDS 228150 228782 . + 0 ID=cds260;Parent=gene261;Dbxref=Genbank:WP_011412109.1;Name=WP_011412109.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011412109.1;transl_table=11 NZ_CP006568.1 RefSeq gene 228835 230911 . + . ID=gene262;Name=SOPEG_RS01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01310;pseudo=true NZ_CP006568.1 Protein Homology CDS 228835 230911 . + 0 ID=cds261;Parent=gene262;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 231064 233668 . + . ID=id36;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 231188 231937 . - . ID=gene263;Name=SOPEG_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01315;old_locus_tag=SOPEG_0255 NZ_CP006568.1 Protein Homology CDS 231188 231937 . - 0 ID=cds262;Parent=gene263;Dbxref=Genbank:WP_025244026.1;Name=WP_025244026.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244026.1;transl_table=11 NZ_CP006568.1 RefSeq gene 231949 233466 . - . ID=gene264;Name=SOPEG_RS01320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01320;pseudo=true NZ_CP006568.1 Protein Homology CDS 231949 233466 . - 0 ID=cds263;Parent=gene264;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(232741..232743)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 233724 234947 . - . ID=gene265;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=SOPEG_RS01325;old_locus_tag=SOPEG_0257 NZ_CP006568.1 Protein Homology CDS 233724 234947 . - 0 ID=cds264;Parent=gene265;Dbxref=Genbank:WP_025244027.1;Name=WP_025244027.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_025244027.1;transl_table=11 NZ_CP006568.1 RefSeq gene 235064 235645 . - . ID=gene266;Name=SOPEG_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01330;old_locus_tag=SOPEG_0258 NZ_CP006568.1 Protein Homology CDS 235064 235645 . - 0 ID=cds265;Parent=gene266;Dbxref=Genbank:WP_038468034.1;Name=WP_038468034.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase component II;protein_id=WP_038468034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 235825 236382 . - . ID=gene267;Name=SOPEG_RS01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01335;partial=true;pseudo=true;start_range=.,235825 NZ_CP006568.1 Protein Homology CDS 235825 236382 . - 0 ID=cds266;Parent=gene267;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=cell filamentation protein Fic;pseudo=true;start_range=.,235825;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 236354 237673 . + . ID=id37;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 236391 237599 . - . ID=gene268;Name=SOPEG_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01340;old_locus_tag=SOPEG_0260 NZ_CP006568.1 Protein Homology CDS 236391 237599 . - 0 ID=cds267;Parent=gene268;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 238393 238920 . - . ID=gene269;Name=SOPEG_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01345 NZ_CP006568.1 Protein Homology CDS 238393 238920 . - 0 ID=cds268;Parent=gene269;Dbxref=Genbank:WP_051419984.1;Name=WP_051419984.1;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_051419984.1;transl_table=11 NZ_CP006568.1 RefSeq gene 239267 240451 . + . ID=gene270;Name=SOPEG_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01350;old_locus_tag=SOPEG_0263 NZ_CP006568.1 Protein Homology CDS 239267 240451 . + 0 ID=cds269;Parent=gene270;Dbxref=Genbank:WP_025244031.1;Name=WP_025244031.1;gbkey=CDS;product=transporter;protein_id=WP_025244031.1;transl_table=11 NZ_CP006568.1 RefSeq gene 240743 241541 . + . ID=gene271;Name=SOPEG_RS01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01355;pseudo=true NZ_CP006568.1 Protein Homology CDS 240743 241541 . + 0 ID=cds270;Parent=gene271;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:241015..241017%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 241725 241985 . - . ID=gene272;Name=SOPEG_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01360 NZ_CP006568.1 Protein Homology CDS 241725 241985 . - 0 ID=cds271;Parent=gene272;Dbxref=Genbank:WP_038468037.1;Name=WP_038468037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468037.1;transl_table=11 NZ_CP006568.1 RefSeq gene 242144 243612 . + . ID=gene273;Name=SOPEG_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01365;pseudo=true NZ_CP006568.1 Protein Homology CDS 242144 243612 . + 0 ID=cds272;Parent=gene273;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 243625 244657 . - . ID=gene274;Name=SOPEG_RS01370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01370;pseudo=true NZ_CP006568.1 Protein Homology CDS 243625 244657 . - 0 ID=cds273;Parent=gene274;Note=Catalyzes the deamination of cytosine to uracil and ammonia;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cytosine deaminase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 244827 245831 . - . ID=gene275;Name=SOPEG_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01375;old_locus_tag=SOPEG_0268 NZ_CP006568.1 Protein Homology CDS 244827 245831 . - 0 ID=cds274;Parent=gene275;Dbxref=Genbank:WP_025244033.1;Name=WP_025244033.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_025244033.1;transl_table=11 NZ_CP006568.1 RefSeq gene 245833 246534 . - . ID=gene276;Name=SOPEG_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01380;old_locus_tag=SOPEG_0269 NZ_CP006568.1 Protein Homology CDS 245833 246534 . - 0 ID=cds275;Parent=gene276;Dbxref=Genbank:WP_025244034.1;Name=WP_025244034.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_025244034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 246527 247207 . - . ID=gene277;Name=SOPEG_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01385;old_locus_tag=SOPEG_0270 NZ_CP006568.1 Protein Homology CDS 246527 247207 . - 0 ID=cds276;Parent=gene277;Dbxref=Genbank:WP_025244035.1;Name=WP_025244035.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_025244035.1;transl_table=11 NZ_CP006568.1 RefSeq gene 247255 248067 . - . ID=gene278;Name=SOPEG_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01390;old_locus_tag=SOPEG_0271 NZ_CP006568.1 Protein Homology CDS 247255 248067 . - 0 ID=cds277;Parent=gene278;Dbxref=Genbank:WP_025244036.1;Name=WP_025244036.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_025244036.1;transl_table=11 NZ_CP006568.1 RefSeq gene 248151 249188 . - . ID=gene279;Name=SOPEG_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01395;old_locus_tag=SOPEG_0272 NZ_CP006568.1 Protein Homology CDS 248151 249188 . - 0 ID=cds278;Parent=gene279;Dbxref=Genbank:WP_025244037.1;Name=WP_025244037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244037.1;transl_table=11 NZ_CP006568.1 RefSeq gene 249293 250378 . - . ID=gene280;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SOPEG_RS01400;old_locus_tag=SOPEG_0273 NZ_CP006568.1 Protein Homology CDS 249293 250378 . - 0 ID=cds279;Parent=gene280;Dbxref=Genbank:WP_025244038.1;Name=WP_025244038.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_025244038.1;transl_table=11 NZ_CP006568.1 RefSeq gene 250419 250940 . - . ID=gene281;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SOPEG_RS01405;old_locus_tag=SOPEG_0274 NZ_CP006568.1 Protein Homology CDS 250419 250940 . - 0 ID=cds280;Parent=gene281;Dbxref=Genbank:WP_025244039.1;Name=WP_025244039.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_025244039.1;transl_table=11 NZ_CP006568.1 RefSeq gene 251275 252399 . - . ID=gene282;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=SOPEG_RS01410;pseudo=true NZ_CP006568.1 Protein Homology CDS 251275 252399 . - 0 ID=cds281;Parent=gene282;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=hofQ;product=porin;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 252757 253002 . - . ID=gene283;Name=SOPEG_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01415 NZ_CP006568.1 GeneMarkS+ CDS 252757 253002 . - 0 ID=cds282;Parent=gene283;Dbxref=Genbank:WP_025244040.1;Name=WP_025244040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244040.1;transl_table=11 NZ_CP006568.1 RefSeq gene 253171 253707 . - . ID=gene284;Name=SOPEG_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01420 NZ_CP006568.1 Protein Homology CDS 253171 253707 . - 0 ID=cds283;Parent=gene284;Dbxref=Genbank:WP_025244041.1;Name=WP_025244041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244041.1;transl_table=11 NZ_CP006568.1 RefSeq gene 253795 254124 . - . ID=gene285;Name=SOPEG_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01425 NZ_CP006568.1 Protein Homology CDS 253795 254124 . - 0 ID=cds284;Parent=gene285;Dbxref=Genbank:WP_025244042.1;Name=WP_025244042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244042.1;transl_table=11 NZ_CP006568.1 RefSeq gene 254244 256746 . + . ID=gene286;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=pseudogene;locus_tag=SOPEG_RS01430;pseudo=true NZ_CP006568.1 Protein Homology CDS 254244 256746 . + 0 ID=cds285;Parent=gene286;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 256899 257462 . - . ID=gene287;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=SOPEG_RS01435;old_locus_tag=SOPEG_0281 NZ_CP006568.1 Protein Homology CDS 256899 257462 . - 0 ID=cds286;Parent=gene287;Dbxref=Genbank:WP_025244043.1;Name=WP_025244043.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=adenosine nucleotide hydrolase;protein_id=WP_025244043.1;transl_table=11 NZ_CP006568.1 RefSeq gene 257826 258653 . + . ID=gene288;Name=SOPEG_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22385 NZ_CP006568.1 Protein Homology CDS 257826 258653 . + 0 ID=cds287;Parent=gene288;Dbxref=Genbank:WP_051419382.1;Name=WP_051419382.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419382.1;transl_table=11 NZ_CP006568.1 RefSeq gene 258650 258904 . + . ID=gene289;Name=SOPEG_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22390 NZ_CP006568.1 GeneMarkS+ CDS 258650 258904 . + 0 ID=cds288;Parent=gene289;Dbxref=Genbank:WP_025244045.1;Name=WP_025244045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244045.1;transl_table=11 NZ_CP006568.1 RefSeq gene 258945 259346 . + . ID=gene290;Name=SOPEG_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22395 NZ_CP006568.1 Protein Homology CDS 258945 259346 . + 0 ID=cds289;Parent=gene290;Dbxref=Genbank:WP_025244046.1;Name=WP_025244046.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244046.1;transl_table=11 NZ_CP006568.1 RefSeq gene 259465 260162 . + . ID=gene291;Name=SOPEG_RS01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01445;pseudo=true NZ_CP006568.1 Protein Homology CDS 259465 260162 . + 0 ID=cds290;Parent=gene291;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nucleotidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 260159 260581 . + . ID=gene292;Name=SOPEG_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01450;old_locus_tag=SOPEG_0284 NZ_CP006568.1 Protein Homology CDS 260159 260581 . + 0 ID=cds291;Parent=gene292;Dbxref=Genbank:WP_025244047.1;Name=WP_025244047.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_025244047.1;transl_table=11 NZ_CP006568.1 RefSeq gene 260614 261492 . + . ID=gene293;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SOPEG_RS01455;old_locus_tag=SOPEG_0285 NZ_CP006568.1 Protein Homology CDS 260614 261492 . + 0 ID=cds292;Parent=gene293;Dbxref=Genbank:WP_025244048.1;Name=WP_025244048.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_025244048.1;transl_table=11 NZ_CP006568.1 RefSeq gene 261688 263307 . + . ID=gene294;Name=SOPEG_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01460;old_locus_tag=SOPEG_0286 NZ_CP006568.1 Protein Homology CDS 261688 263307 . + 0 ID=cds293;Parent=gene294;Dbxref=Genbank:WP_025244049.1;Name=WP_025244049.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase;protein_id=WP_025244049.1;transl_table=11 NZ_CP006568.1 RefSeq gene 263480 264805 . - . ID=gene295;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=SOPEG_RS01465;old_locus_tag=SOPEG_0287 NZ_CP006568.1 Protein Homology CDS 263480 264805 . - 0 ID=cds294;Parent=gene295;Dbxref=Genbank:WP_038468042.1;Name=WP_038468042.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_038468042.1;transl_table=11 NZ_CP006568.1 RefSeq gene 264802 265521 . - . ID=gene296;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=SOPEG_RS01470;old_locus_tag=SOPEG_0288 NZ_CP006568.1 Protein Homology CDS 264802 265521 . - 0 ID=cds295;Parent=gene296;Dbxref=Genbank:WP_025244050.1;Name=WP_025244050.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_025244050.1;transl_table=11 NZ_CP006568.1 RefSeq gene 265792 266235 . - . ID=gene297;Name=SOPEG_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01475 NZ_CP006568.1 Protein Homology CDS 265792 266235 . - 0 ID=cds296;Parent=gene297;Dbxref=Genbank:WP_038468044.1;Name=WP_038468044.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_038468044.1;transl_table=11 NZ_CP006568.1 RefSeq gene 266387 268714 . + . ID=gene298;Name=SOPEG_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01480;old_locus_tag=SOPEG_0290 NZ_CP006568.1 Protein Homology CDS 266387 268714 . + 0 ID=cds297;Parent=gene298;Dbxref=Genbank:WP_025244051.1;Name=WP_025244051.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_025244051.1;transl_table=11 NZ_CP006568.1 RefSeq gene 269472 269705 . + . ID=gene299;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=SOPEG_RS01485;old_locus_tag=SOPEG_0291 NZ_CP006568.1 Protein Homology CDS 269472 269705 . + 0 ID=cds298;Parent=gene299;Dbxref=Genbank:WP_025244052.1;Name=WP_025244052.1;gbkey=CDS;gene=feoA;product=ferrous iron transporter A;protein_id=WP_025244052.1;transl_table=11 NZ_CP006568.1 RefSeq gene 269779 272085 . + . ID=gene300;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=SOPEG_RS01490;old_locus_tag=SOPEG_0292 NZ_CP006568.1 Protein Homology CDS 269779 272085 . + 0 ID=cds299;Parent=gene300;Dbxref=Genbank:WP_038468047.1;Name=WP_038468047.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=ferrous iron transporter B;protein_id=WP_038468047.1;transl_table=11 NZ_CP006568.1 RefSeq gene 272107 272337 . + . ID=gene301;Name=SOPEG_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01495;old_locus_tag=SOPEG_0293 NZ_CP006568.1 Protein Homology CDS 272107 272337 . + 0 ID=cds300;Parent=gene301;Dbxref=Genbank:WP_051419383.1;Name=WP_051419383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419383.1;transl_table=11 NZ_CP006568.1 RefSeq gene 272658 274323 . + . ID=gene302;Name=SOPEG_RS01500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01500;pseudo=true NZ_CP006568.1 Protein Homology CDS 272658 274323 . + 0 ID=cds301;Parent=gene302;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar phosphorylase;pseudo=true;transl_except=(pos:272964..272966%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 274374 275084 . - . ID=gene303;Name=SOPEG_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01505 NZ_CP006568.1 Protein Homology CDS 274374 275084 . - 0 ID=cds302;Parent=gene303;Dbxref=Genbank:WP_025244055.1;Name=WP_025244055.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_025244055.1;transl_table=11 NZ_CP006568.1 RefSeq gene 275263 275745 . + . ID=gene304;Name=SOPEG_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01510 NZ_CP006568.1 Protein Homology CDS 275263 275745 . + 0 ID=cds303;Parent=gene304;Dbxref=Genbank:WP_051419384.1;Name=WP_051419384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419384.1;transl_table=11 NZ_CP006568.1 RefSeq gene 275805 276380 . + . ID=gene305;Name=SOPEG_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01515;old_locus_tag=SOPEG_0297 NZ_CP006568.1 Protein Homology CDS 275805 276380 . + 0 ID=cds304;Parent=gene305;Dbxref=Genbank:WP_025244056.1;Name=WP_025244056.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_025244056.1;transl_table=11 NZ_CP006568.1 RefSeq gene 276539 278653 . - . ID=gene306;Name=SOPEG_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01520;old_locus_tag=SOPEG_0298 NZ_CP006568.1 Protein Homology CDS 276539 278653 . - 0 ID=cds305;Parent=gene306;Dbxref=Genbank:WP_038468050.1;Name=WP_038468050.1;gbkey=CDS;product=4-alpha-glucanotransferase;protein_id=WP_038468050.1;transl_table=11 NZ_CP006568.1 RefSeq gene 278701 281097 . - . ID=gene307;Name=SOPEG_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01525;old_locus_tag=SOPEG_0299 NZ_CP006568.1 Protein Homology CDS 278701 281097 . - 0 ID=cds306;Parent=gene307;Dbxref=Genbank:WP_025244058.1;Name=WP_025244058.1;gbkey=CDS;product=maltose phosphorylase;protein_id=WP_025244058.1;transl_table=11 NZ_CP006568.1 RefSeq gene 281414 282172 . - . ID=gene308;Name=SOPEG_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01530;old_locus_tag=SOPEG_0300 NZ_CP006568.1 Protein Homology CDS 281414 282172 . - 0 ID=cds307;Parent=gene308;Dbxref=Genbank:WP_025244059.1;Name=WP_025244059.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244059.1;transl_table=11 NZ_CP006568.1 RefSeq gene 282197 283045 . - . ID=gene309;Name=SOPEG_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01535;old_locus_tag=SOPEG_0301 NZ_CP006568.1 Protein Homology CDS 282197 283045 . - 0 ID=cds308;Parent=gene309;Dbxref=Genbank:WP_025244060.1;Name=WP_025244060.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=intramembrane serine protease GlpG;protein_id=WP_025244060.1;transl_table=11 NZ_CP006568.1 RefSeq gene 283340 283663 . - . ID=gene310;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=SOPEG_RS01540;old_locus_tag=SOPEG_0302 NZ_CP006568.1 Protein Homology CDS 283340 283663 . - 0 ID=cds309;Parent=gene310;Dbxref=Genbank:WP_025244061.1;Name=WP_025244061.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase;protein_id=WP_025244061.1;transl_table=11 NZ_CP006568.1 RefSeq gene 283966 285465 . + . ID=gene311;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=pseudogene;locus_tag=SOPEG_RS01545;pseudo=true NZ_CP006568.1 Protein Homology CDS 283966 285465 . + 0 ID=cds310;Parent=gene311;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;pseudo=true;transl_except=(pos:285358..285360%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 285493 286233 . - . ID=gene312;Name=SOPEG_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01550 NZ_CP006568.1 Protein Homology CDS 285493 286233 . - 0 ID=cds311;Parent=gene312;Dbxref=Genbank:WP_051419385.1;Name=WP_051419385.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_051419385.1;transl_table=11 NZ_CP006568.1 RefSeq gene 286193 287104 . - . ID=gene313;Name=SOPEG_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22400 NZ_CP006568.1 Protein Homology CDS 286193 287104 . - 0 ID=cds312;Parent=gene313;Dbxref=Genbank:WP_051419386.1;Name=WP_051419386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419386.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 287053 288114 . + . ID=id38;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 287131 288054 . + . ID=gene314;Name=SOPEG_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01555;old_locus_tag=SOPEG_0305 NZ_CP006568.1 Protein Homology CDS 287131 288054 . + 0 ID=cds313;Parent=gene314;Dbxref=Genbank:WP_025244062.1;Name=WP_025244062.1;gbkey=CDS;product=transposase;protein_id=WP_025244062.1;transl_table=11 NZ_CP006568.1 RefSeq gene 288304 288684 . - . ID=gene315;Name=SOPEG_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01560 NZ_CP006568.1 GeneMarkS+ CDS 288304 288684 . - 0 ID=cds314;Parent=gene315;Dbxref=Genbank:WP_038468054.1;Name=WP_038468054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468054.1;transl_table=11 NZ_CP006568.1 RefSeq gene 288922 290351 . - . ID=gene316;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=SOPEG_RS01565;pseudo=true NZ_CP006568.1 Protein Homology CDS 288922 290351 . - 0 ID=cds315;Parent=gene316;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=glgA;product=glycogen synthase;pseudo=true;transl_except=(pos:complement(290058..290060)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 290404 291682 . - . ID=gene317;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=SOPEG_RS01570;pseudo=true NZ_CP006568.1 Protein Homology CDS 290404 291682 . - 0 ID=cds316;Parent=gene317;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_except=(pos:complement(290470..290472)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 291694 293673 . - . ID=gene318;Name=SOPEG_RS01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01575;pseudo=true NZ_CP006568.1 Protein Homology CDS 291694 293673 . - 0 ID=cds317;Parent=gene318;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;pseudo=true;transl_except=(pos:complement(293125..293127)%2Caa:Other),(pos:complement(293035..293037)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 293670 295700 . - . ID=gene319;Name=SOPEG_RS01580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01580;pseudo=true NZ_CP006568.1 Protein Homology CDS 293670 295700 . - 0 ID=cds318;Parent=gene319;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycogen branching protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 295685 296747 . + . ID=id39;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 295744 296667 . - . ID=gene320;Name=SOPEG_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01585;old_locus_tag=SOPEG_0310 NZ_CP006568.1 Protein Homology CDS 295744 296667 . - 0 ID=cds319;Parent=gene320;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 297612 298718 . - . ID=gene321;Name=SOPEG_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01590;old_locus_tag=SOPEG_0311 NZ_CP006568.1 Protein Homology CDS 297612 298718 . - 0 ID=cds320;Parent=gene321;Dbxref=Genbank:WP_025244064.1;Name=WP_025244064.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_025244064.1;transl_table=11 NZ_CP006568.1 RefSeq gene 298926 299519 . + . ID=gene322;Name=SOPEG_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01595;old_locus_tag=SOPEG_0312 NZ_CP006568.1 Protein Homology CDS 298926 299519 . + 0 ID=cds321;Parent=gene322;Dbxref=Genbank:WP_025244065.1;Name=WP_025244065.1;gbkey=CDS;product=antibiotic transporter;protein_id=WP_025244065.1;transl_table=11 NZ_CP006568.1 RefSeq gene 299661 300977 . - . ID=gene323;Name=SOPEG_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01600;old_locus_tag=SOPEG_0313 NZ_CP006568.1 Protein Homology CDS 299661 300977 . - 0 ID=cds322;Parent=gene323;Dbxref=Genbank:WP_025244066.1;Name=WP_025244066.1;gbkey=CDS;product=gluconate transporter;protein_id=WP_025244066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 301275 302270 . - . ID=gene324;Name=SOPEG_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01605;old_locus_tag=SOPEG_0314 NZ_CP006568.1 Protein Homology CDS 301275 302270 . - 0 ID=cds323;Parent=gene324;Dbxref=Genbank:WP_025244067.1;Name=WP_025244067.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244067.1;transl_table=11 NZ_CP006568.1 RefSeq gene 302346 303025 . - . ID=gene325;Name=SOPEG_RS01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01610;pseudo=true NZ_CP006568.1 Protein Homology CDS 302346 303025 . - 0 ID=cds324;Parent=gene325;exception=annotated by transcript or proteomic data;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;pseudo=true;transl_except=(pos:complement(302484..302486)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 303285 304083 . - . ID=gene326;Name=SOPEG_RS01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01615;pseudo=true NZ_CP006568.1 Protein Homology CDS 303285 304083 . - 0 ID=cds325;Parent=gene326;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hydrolase;pseudo=true;transl_except=(pos:complement(303684..303686)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 304130 305076 . - . ID=gene327;Name=SOPEG_RS01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01620;pseudo=true NZ_CP006568.1 Protein Homology CDS 304130 305076 . - 0 ID=cds326;Parent=gene327;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lysophospholipase;pseudo=true;transl_except=(pos:complement(304403..304405)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 305091 305653 . - . ID=gene328;Name=SOPEG_RS01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01625;pseudo=true NZ_CP006568.1 Protein Homology CDS 305091 305653 . - 0 ID=cds327;Parent=gene328;exception=annotated by transcript or proteomic data;gbkey=CDS;product=threonine transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 305804 307641 . - . ID=gene329;Name=SOPEG_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01630;pseudo=true NZ_CP006568.1 Protein Homology CDS 305804 307641 . - 0 ID=cds328;Parent=gene329;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 307707 308501 . - . ID=gene330;Name=SOPEG_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01635;old_locus_tag=SOPEG_0320 NZ_CP006568.1 Protein Homology CDS 307707 308501 . - 0 ID=cds329;Parent=gene330;Dbxref=Genbank:WP_025244068.1;Name=WP_025244068.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_025244068.1;transl_table=11 NZ_CP006568.1 RefSeq gene 308707 309171 . + . ID=gene331;Name=SOPEG_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01640;old_locus_tag=SOPEG_0321 NZ_CP006568.1 Protein Homology CDS 308707 309171 . + 0 ID=cds330;Parent=gene331;Dbxref=Genbank:WP_025244069.1;Name=WP_025244069.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244069.1;transl_table=11 NZ_CP006568.1 RefSeq gene 309175 310071 . + . ID=gene332;Name=SOPEG_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01645;old_locus_tag=SOPEG_0322 NZ_CP006568.1 Protein Homology CDS 309175 310071 . + 0 ID=cds331;Parent=gene332;Dbxref=Genbank:WP_025244070.1;Name=WP_025244070.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_025244070.1;transl_table=11 NZ_CP006568.1 RefSeq gene 310079 310976 . - . ID=gene333;Name=SOPEG_RS01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01650;pseudo=true NZ_CP006568.1 Protein Homology CDS 310079 310976 . - 0 ID=cds332;Parent=gene333;exception=annotated by transcript or proteomic data;gbkey=CDS;product=AbrB family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 311188 312138 . - . ID=gene334;Name=SOPEG_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01655;old_locus_tag=SOPEG_0324 NZ_CP006568.1 Protein Homology CDS 311188 312138 . - 0 ID=cds333;Parent=gene334;Dbxref=Genbank:WP_025244071.1;Name=WP_025244071.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_025244071.1;transl_table=11 NZ_CP006568.1 RefSeq gene 312476 314638 . - . ID=gene335;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=SOPEG_RS01660;old_locus_tag=SOPEG_0325 NZ_CP006568.1 Protein Homology CDS 312476 314638 . - 0 ID=cds334;Parent=gene335;Dbxref=Genbank:WP_025244072.1;Name=WP_025244072.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase II;protein_id=WP_025244072.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 314699 316415 . + . ID=id40;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 314769 315989 . + . ID=gene336;Name=SOPEG_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01665;old_locus_tag=SOPEG_0326 NZ_CP006568.1 Protein Homology CDS 314769 315989 . + 0 ID=cds335;Parent=gene336;Dbxref=Genbank:WP_025244073.1;Name=WP_025244073.1;gbkey=CDS;product=transposase;protein_id=WP_025244073.1;transl_table=11 NZ_CP006568.1 RefSeq gene 316439 317152 . - . ID=gene337;Name=SOPEG_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01670;old_locus_tag=SOPEG_0327 NZ_CP006568.1 Protein Homology CDS 316439 317152 . - 0 ID=cds336;Parent=gene337;Dbxref=Genbank:WP_025244074.1;Name=WP_025244074.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_025244074.1;transl_table=11 NZ_CP006568.1 RefSeq gene 317152 318063 . - . ID=gene338;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=SOPEG_RS01675;old_locus_tag=SOPEG_0328 NZ_CP006568.1 Protein Homology CDS 317152 318063 . - 0 ID=cds337;Parent=gene338;Dbxref=Genbank:WP_025244075.1;Name=WP_025244075.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=site-specific tyrosine recombinase XerC;protein_id=WP_025244075.1;transl_table=11 NZ_CP006568.1 RefSeq gene 318060 318764 . - . ID=gene339;Name=SOPEG_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01680;old_locus_tag=SOPEG_0329 NZ_CP006568.1 Protein Homology CDS 318060 318764 . - 0 ID=cds338;Parent=gene339;Dbxref=Genbank:WP_025244076.1;Name=WP_025244076.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244076.1;transl_table=11 NZ_CP006568.1 RefSeq gene 318761 319585 . - . ID=gene340;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=SOPEG_RS01685;old_locus_tag=SOPEG_0330 NZ_CP006568.1 Protein Homology CDS 318761 319585 . - 0 ID=cds339;Parent=gene340;Dbxref=Genbank:WP_025244077.1;Name=WP_025244077.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_025244077.1;transl_table=11 NZ_CP006568.1 RefSeq gene 319655 319885 . - . ID=gene341;Name=SOPEG_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01690;old_locus_tag=SOPEG_0331 NZ_CP006568.1 Protein Homology CDS 319655 319885 . - 0 ID=cds340;Parent=gene341;Dbxref=Genbank:WP_051419387.1;Name=WP_051419387.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419387.1;transl_table=11 NZ_CP006568.1 RefSeq gene 320017 322566 . - . ID=gene342;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS01695;old_locus_tag=SOPEG_0332 NZ_CP006568.1 Protein Homology CDS 320017 322566 . - 0 ID=cds341;Parent=gene342;Dbxref=Genbank:WP_025244079.1;Name=WP_025244079.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_025244079.1;transl_table=11 NZ_CP006568.1 RefSeq gene 322855 323796 . + . ID=gene343;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=SOPEG_RS01700;old_locus_tag=SOPEG_0333 NZ_CP006568.1 Protein Homology CDS 322855 323796 . + 0 ID=cds342;Parent=gene343;Dbxref=Genbank:WP_025244080.1;Name=WP_025244080.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_025244080.1;transl_table=11 NZ_CP006568.1 RefSeq gene 323793 324533 . + . ID=gene344;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=SOPEG_RS01705;old_locus_tag=SOPEG_0334 NZ_CP006568.1 Protein Homology CDS 323793 324533 . + 0 ID=cds343;Parent=gene344;Dbxref=Genbank:WP_025244081.1;Name=WP_025244081.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_025244081.1;transl_table=11 NZ_CP006568.1 RefSeq gene 324542 325774 . + . ID=gene345;Name=SOPEG_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01710;old_locus_tag=SOPEG_0335 NZ_CP006568.1 Protein Homology CDS 324542 325774 . + 0 ID=cds344;Parent=gene345;Dbxref=Genbank:WP_038468059.1;Name=WP_038468059.1;gbkey=CDS;product=uroporphyrin-III methyltransferase;protein_id=WP_038468059.1;transl_table=11 NZ_CP006568.1 RefSeq gene 325778 326953 . + . ID=gene346;Name=SOPEG_RS01715;end_range=326953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01715;old_locus_tag=SOPEG_0336;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 325778 326953 . + 0 ID=cds345;Parent=gene346;end_range=326953,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=protoheme IX biogenesis protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 327200 328051 . - . ID=gene347;Name=SOPEG_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01720;old_locus_tag=SOPEG_0337 NZ_CP006568.1 Protein Homology CDS 327200 328051 . - 0 ID=cds346;Parent=gene347;Dbxref=Genbank:WP_025244084.1;Name=WP_025244084.1;gbkey=CDS;product=ureidoglycolate lyase;protein_id=WP_025244084.1;transl_table=11 NZ_CP006568.1 RefSeq gene 328357 329132 . - . ID=gene348;Name=SOPEG_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01725;pseudo=true NZ_CP006568.1 Protein Homology CDS 328357 329132 . - 0 ID=cds347;Parent=gene348;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 329343 329600 . - . ID=gene349;Name=SOPEG_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01730 NZ_CP006568.1 GeneMarkS+ CDS 329343 329600 . - 0 ID=cds348;Parent=gene349;Dbxref=Genbank:WP_025244085.1;Name=WP_025244085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244085.1;transl_table=11 NZ_CP006568.1 RefSeq gene 329662 329880 . + . ID=gene350;Name=SOPEG_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01735 NZ_CP006568.1 GeneMarkS+ CDS 329662 329880 . + 0 ID=cds349;Parent=gene350;Dbxref=Genbank:WP_025244086.1;Name=WP_025244086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244086.1;transl_table=11 NZ_CP006568.1 RefSeq gene 329911 330771 . - . ID=gene351;Name=SOPEG_RS01740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01740;pseudo=true NZ_CP006568.1 Protein Homology CDS 329911 330771 . - 0 ID=cds350;Parent=gene351;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(330049..330051)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 330859 331710 . - . ID=gene352;Name=SOPEG_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01745;old_locus_tag=SOPEG_0342 NZ_CP006568.1 Protein Homology CDS 330859 331710 . - 0 ID=cds351;Parent=gene352;Dbxref=Genbank:WP_025244087.1;Name=WP_025244087.1;gbkey=CDS;product=aldolase;protein_id=WP_025244087.1;transl_table=11 NZ_CP006568.1 RefSeq gene 331722 332814 . - . ID=gene353;Name=SOPEG_RS01750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01750;pseudo=true NZ_CP006568.1 Protein Homology CDS 331722 332814 . - 0 ID=cds352;Parent=gene353;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS fructose transporter subunit IIC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 332841 333157 . - . ID=gene354;Name=SOPEG_RS01755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01755;pseudo=true NZ_CP006568.1 Protein Homology CDS 332841 333157 . - 0 ID=cds353;Parent=gene354;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS fructose transporter subunit IIB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 333206 333652 . - . ID=gene355;Name=SOPEG_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01760 NZ_CP006568.1 Protein Homology CDS 333206 333652 . - 0 ID=cds354;Parent=gene355;Dbxref=Genbank:WP_038468062.1;Name=WP_038468062.1;gbkey=CDS;product=PTS fructose/mannitol transporter subunit IIA;protein_id=WP_038468062.1;transl_table=11 NZ_CP006568.1 RefSeq gene 333639 335011 . - . ID=gene356;Name=SOPEG_RS01765;end_range=335011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01765;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 333639 335011 . - 0 ID=cds355;Parent=gene356;end_range=335011,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=LicR;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 335009 337909 . + . ID=id41;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 335068 335202 . - . ID=gene357;Name=SOPEG_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01770 NZ_CP006568.1 Protein Homology CDS 335068 335202 . - 0 ID=cds356;Parent=gene357;Dbxref=Genbank:WP_051419985.1;Name=WP_051419985.1;gbkey=CDS;product=cytoplasmic protein;protein_id=WP_051419985.1;transl_table=11 NZ_CP006568.1 RefSeq gene 335508 336248 . + . ID=gene358;Name=SOPEG_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01775 NZ_CP006568.1 Protein Homology CDS 335508 336248 . + 0 ID=cds357;Parent=gene358;Dbxref=Genbank:WP_051419388.1;Name=WP_051419388.1;gbkey=CDS;product=transposase;protein_id=WP_051419388.1;transl_table=11 NZ_CP006568.1 RefSeq gene 336752 337024 . + . ID=gene359;Name=SOPEG_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22405 NZ_CP006568.1 Protein Homology CDS 336752 337024 . + 0 ID=cds358;Parent=gene359;Dbxref=Genbank:WP_051419389.1;Name=WP_051419389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419389.1;transl_table=11 NZ_CP006568.1 RefSeq gene 337036 337785 . + . ID=gene360;Name=SOPEG_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01785;old_locus_tag=SOPEG_0349 NZ_CP006568.1 Protein Homology CDS 337036 337785 . + 0 ID=cds359;Parent=gene360;Dbxref=Genbank:WP_025244089.1;Name=WP_025244089.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244089.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 337938 339259 . + . ID=id42;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 338140 339222 . + . ID=gene361;Name=SOPEG_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01790;old_locus_tag=SOPEG_0350 NZ_CP006568.1 Protein Homology CDS 338140 339222 . + 0 ID=cds360;Parent=gene361;Dbxref=Genbank:WP_051419986.1;Name=WP_051419986.1;gbkey=CDS;product=transposase;protein_id=WP_051419986.1;transl_table=11 NZ_CP006568.1 RefSeq gene 339396 340214 . - . ID=gene362;Name=SOPEG_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01795;old_locus_tag=SOPEG_0352 NZ_CP006568.1 Protein Homology CDS 339396 340214 . - 0 ID=cds361;Parent=gene362;Dbxref=Genbank:WP_025244091.1;Name=WP_025244091.1;gbkey=CDS;product=shikimate dehydrogenase;protein_id=WP_025244091.1;transl_table=11 NZ_CP006568.1 RefSeq gene 340234 340806 . - . ID=gene363;Name=SOPEG_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01800;old_locus_tag=SOPEG_0353 NZ_CP006568.1 Protein Homology CDS 340234 340806 . - 0 ID=cds362;Parent=gene363;Dbxref=Genbank:WP_025244092.1;Name=WP_025244092.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein;protein_id=WP_025244092.1;transl_table=11 NZ_CP006568.1 RefSeq gene 340796 341350 . - . ID=gene364;Name=SOPEG_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01805;old_locus_tag=SOPEG_0354 NZ_CP006568.1 Protein Homology CDS 340796 341350 . - 0 ID=cds363;Parent=gene364;Dbxref=Genbank:WP_025244093.1;Name=WP_025244093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244093.1;transl_table=11 NZ_CP006568.1 RefSeq gene 341374 341847 . - . ID=gene365;Name=SOPEG_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01810;old_locus_tag=SOPEG_0355 NZ_CP006568.1 Protein Homology CDS 341374 341847 . - 0 ID=cds364;Parent=gene365;Dbxref=Genbank:WP_025244094.1;Name=WP_025244094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244094.1;transl_table=11 NZ_CP006568.1 RefSeq gene 341819 342938 . - . ID=gene366;Name=SOPEG_RS01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01815;pseudo=true NZ_CP006568.1 Protein Homology CDS 341819 342938 . - 0 ID=cds365;Parent=gene366;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA processing protein DprA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 343071 343586 . + . ID=gene367;Name=SOPEG_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01820;old_locus_tag=SOPEG_0357 NZ_CP006568.1 Protein Homology CDS 343071 343586 . + 0 ID=cds366;Parent=gene367;Dbxref=Genbank:WP_025244096.1;Name=WP_025244096.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_025244096.1;transl_table=11 NZ_CP006568.1 RefSeq gene 343609 344565 . + . ID=gene368;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SOPEG_RS01825;old_locus_tag=SOPEG_0358 NZ_CP006568.1 Protein Homology CDS 343609 344565 . + 0 ID=cds367;Parent=gene368;Dbxref=Genbank:WP_025244097.1;Name=WP_025244097.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_025244097.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 344804 346480 . + . ID=id43;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 344867 345007 . - . ID=gene369;Name=SOPEG_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01830 NZ_CP006568.1 Protein Homology CDS 344867 345007 . - 0 ID=cds368;Parent=gene369;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 345119 346357 . + . ID=gene370;Name=SOPEG_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01835 NZ_CP006568.1 Protein Homology CDS 345119 346357 . + 0 ID=cds369;Parent=gene370;Dbxref=Genbank:WP_025244098.1;Name=WP_025244098.1;gbkey=CDS;product=transposase;protein_id=WP_025244098.1;transl_table=11 NZ_CP006568.1 RefSeq gene 346534 347274 . - . ID=gene371;Name=SOPEG_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01840 NZ_CP006568.1 Protein Homology CDS 346534 347274 . - 0 ID=cds370;Parent=gene371;Dbxref=Genbank:WP_025244099.1;Name=WP_025244099.1;gbkey=CDS;product=phosphate ABC transporter ATP-binding protein;protein_id=WP_025244099.1;transl_table=11 NZ_CP006568.1 RefSeq gene 347313 347738 . - . ID=gene372;Name=pstA;end_range=347738,.;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=SOPEG_RS01845;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 347313 347738 . - 0 ID=cds371;Parent=gene372;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;end_range=347738,.;exception=unextendable partial coding region;gbkey=CDS;gene=pstA;partial=true;product=phosphate transporter permease subunit PtsA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 347719 347994 . + . ID=id44;gbkey=repeat_region;gene=pstA NZ_CP006568.1 RefSeq gene 347794 347934 . + . ID=gene373;Name=SOPEG_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01850 NZ_CP006568.1 Protein Homology CDS 347794 347934 . + 0 ID=cds372;Parent=gene373;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 347995 348204 . - . ID=gene374;Name=SOPEG_RS01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01855;partial=true;pseudo=true;start_range=.,347995 NZ_CP006568.1 Protein Homology CDS 347995 348204 . - 0 ID=cds373;Parent=gene374;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,347995;transl_table=11 NZ_CP006568.1 RefSeq gene 348207 348521 . - . ID=gene375;Name=SOPEG_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01860 NZ_CP006568.1 Protein Homology CDS 348207 348521 . - 0 ID=cds374;Parent=gene375;Dbxref=Genbank:WP_038468070.1;Name=WP_038468070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468070.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 348522 349583 . + . ID=id45;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 348601 349524 . + . ID=gene376;Name=SOPEG_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01865;old_locus_tag=SOPEG_0367 NZ_CP006568.1 Protein Homology CDS 348601 349524 . + 0 ID=cds375;Parent=gene376;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 349517 350455 . - . ID=gene377;Name=SOPEG_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01870 NZ_CP006568.1 Protein Homology CDS 349517 350455 . - 0 ID=cds376;Parent=gene377;Dbxref=Genbank:WP_025244101.1;Name=WP_025244101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244101.1;transl_table=11 NZ_CP006568.1 RefSeq gene 350452 351162 . - . ID=gene378;Name=SOPEG_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01875 NZ_CP006568.1 Protein Homology CDS 350452 351162 . - 0 ID=cds377;Parent=gene378;Dbxref=Genbank:WP_025244102.1;Name=WP_025244102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244102.1;transl_table=11 NZ_CP006568.1 RefSeq gene 351196 351450 . - . ID=gene379;Name=SOPEG_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01880 NZ_CP006568.1 Protein Homology CDS 351196 351450 . - 0 ID=cds378;Parent=gene379;Dbxref=Genbank:WP_025244103.1;Name=WP_025244103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244103.1;transl_table=11 NZ_CP006568.1 RefSeq gene 352224 352300 . - . ID=gene380;Name=SOPEG_RS01885;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS01885;old_locus_tag=SOPEG_t0369 NZ_CP006568.1 tRNAscan-SE tRNA 352224 352300 . - . ID=rna1;Parent=gene380;anticodon=(pos:complement(352264..352266));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 tRNAscan-SE exon 352224 352300 . - . ID=id46;Parent=rna1;anticodon=(pos:complement(352264..352266));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 RefSeq gene 352382 352468 . - . ID=gene381;Name=SOPEG_RS01890;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS01890;old_locus_tag=SOPEG_t0370 NZ_CP006568.1 tRNAscan-SE tRNA 352382 352468 . - . ID=rna2;Parent=gene381;anticodon=(pos:complement(352432..352434));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 352382 352468 . - . ID=id47;Parent=rna2;anticodon=(pos:complement(352432..352434));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 352483 352558 . - . ID=gene382;Name=SOPEG_RS01895;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS01895;old_locus_tag=SOPEG_t0371 NZ_CP006568.1 tRNAscan-SE tRNA 352483 352558 . - . ID=rna3;Parent=gene382;anticodon=(pos:complement(352523..352525));gbkey=tRNA;product=tRNA-His NZ_CP006568.1 tRNAscan-SE exon 352483 352558 . - . ID=id48;Parent=rna3;anticodon=(pos:complement(352523..352525));gbkey=tRNA;product=tRNA-His NZ_CP006568.1 RefSeq gene 352620 352696 . - . ID=gene383;Name=SOPEG_RS01900;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS01900;old_locus_tag=SOPEG_t0372 NZ_CP006568.1 tRNAscan-SE tRNA 352620 352696 . - . ID=rna4;Parent=gene383;anticodon=(pos:complement(352660..352662));gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 tRNAscan-SE exon 352620 352696 . - . ID=id49;Parent=rna4;anticodon=(pos:complement(352660..352662));gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 RefSeq gene 352825 353565 . - . ID=gene384;Name=SOPEG_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01905;old_locus_tag=SOPEG_0373 NZ_CP006568.1 Protein Homology CDS 352825 353565 . - 0 ID=cds379;Parent=gene384;Dbxref=Genbank:WP_025244104.1;Name=WP_025244104.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_025244104.1;transl_table=11 NZ_CP006568.1 RefSeq gene 353565 354941 . - . ID=gene385;Name=SOPEG_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01910 NZ_CP006568.1 Protein Homology CDS 353565 354941 . - 0 ID=cds380;Parent=gene385;Dbxref=Genbank:WP_025244105.1;Name=WP_025244105.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=common antigen polymerase;protein_id=WP_025244105.1;transl_table=11 NZ_CP006568.1 RefSeq gene 356021 357271 . - . ID=gene386;Name=SOPEG_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01915;old_locus_tag=SOPEG_0375 NZ_CP006568.1 Protein Homology CDS 356021 357271 . - 0 ID=cds381;Parent=gene386;Dbxref=Genbank:WP_025244106.1;Name=WP_025244106.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=O-antigen translocase;protein_id=WP_025244106.1;transl_table=11 NZ_CP006568.1 RefSeq gene 357273 358394 . - . ID=gene387;Name=SOPEG_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01920;old_locus_tag=SOPEG_0376 NZ_CP006568.1 Protein Homology CDS 357273 358394 . - 0 ID=cds382;Parent=gene387;Dbxref=Genbank:WP_025244107.1;Name=WP_025244107.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_025244107.1;transl_table=11 NZ_CP006568.1 RefSeq gene 358381 359124 . - . ID=gene388;Name=SOPEG_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01925;old_locus_tag=SOPEG_0377 NZ_CP006568.1 Protein Homology CDS 358381 359124 . - 0 ID=cds383;Parent=gene388;Dbxref=Genbank:WP_025244108.1;Name=WP_025244108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244108.1;transl_table=11 NZ_CP006568.1 RefSeq gene 359102 359983 . - . ID=gene389;Name=SOPEG_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01930;old_locus_tag=SOPEG_0378 NZ_CP006568.1 Protein Homology CDS 359102 359983 . - 0 ID=cds384;Parent=gene389;Dbxref=Genbank:WP_025244109.1;Name=WP_025244109.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_025244109.1;transl_table=11 NZ_CP006568.1 RefSeq gene 359998 361071 . - . ID=gene390;Name=SOPEG_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01935;old_locus_tag=SOPEG_0379 NZ_CP006568.1 Protein Homology CDS 359998 361071 . - 0 ID=cds385;Parent=gene390;Dbxref=Genbank:WP_025244110.1;Name=WP_025244110.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_025244110.1;transl_table=11 NZ_CP006568.1 RefSeq gene 361068 362330 . - . ID=gene391;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=SOPEG_RS01940;old_locus_tag=SOPEG_0380 NZ_CP006568.1 Protein Homology CDS 361068 362330 . - 0 ID=cds386;Parent=gene391;Dbxref=Genbank:WP_025244111.1;Name=WP_025244111.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_025244111.1;transl_table=11 NZ_CP006568.1 RefSeq gene 362335 363459 . - . ID=gene392;Name=SOPEG_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01945;old_locus_tag=SOPEG_0381 NZ_CP006568.1 Protein Homology CDS 362335 363459 . - 0 ID=cds387;Parent=gene392;Dbxref=Genbank:WP_025244112.1;Name=WP_025244112.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_025244112.1;transl_table=11 NZ_CP006568.1 RefSeq gene 363566 364618 . - . ID=gene393;Name=SOPEG_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01950;old_locus_tag=SOPEG_0382 NZ_CP006568.1 Protein Homology CDS 363566 364618 . - 0 ID=cds388;Parent=gene393;Dbxref=Genbank:WP_025244113.1;Name=WP_025244113.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_025244113.1;transl_table=11 NZ_CP006568.1 RefSeq gene 364638 365732 . - . ID=gene394;Name=SOPEG_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01955;old_locus_tag=SOPEG_0383 NZ_CP006568.1 Protein Homology CDS 364638 365732 . - 0 ID=cds389;Parent=gene394;Dbxref=Genbank:WP_025244114.1;Name=WP_025244114.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_025244114.1;transl_table=11 NZ_CP006568.1 RefSeq gene 366012 367271 . - . ID=gene395;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=SOPEG_RS01960;old_locus_tag=SOPEG_0384 NZ_CP006568.1 Protein Homology CDS 366012 367271 . - 0 ID=cds390;Parent=gene395;Dbxref=Genbank:WP_025244115.1;Name=WP_025244115.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_025244115.1;transl_table=11 NZ_CP006568.1 RefSeq gene 367663 367989 . - . ID=gene396;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=SOPEG_RS01965;old_locus_tag=SOPEG_0385 NZ_CP006568.1 Protein Homology CDS 367663 367989 . - 0 ID=cds391;Parent=gene396;Dbxref=Genbank:WP_025244116.1;Name=WP_025244116.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_025244116.1;transl_table=11 NZ_CP006568.1 RefSeq gene 368107 369375 . + . ID=gene397;Name=SOPEG_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01970;old_locus_tag=SOPEG_0386 NZ_CP006568.1 Protein Homology CDS 368107 369375 . + 0 ID=cds392;Parent=gene397;Dbxref=Genbank:WP_025244117.1;Name=WP_025244117.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_025244117.1;transl_table=11 NZ_CP006568.1 RefSeq gene 369382 370881 . + . ID=gene398;Name=SOPEG_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01975;old_locus_tag=SOPEG_0387 NZ_CP006568.1 Protein Homology CDS 369382 370881 . + 0 ID=cds393;Parent=gene398;Dbxref=Genbank:WP_025244118.1;Name=WP_025244118.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=guanosine polyphosphate pyrophosphohydrolase;protein_id=WP_025244118.1;transl_table=11 NZ_CP006568.1 RefSeq gene 370942 372969 . - . ID=gene399;Name=SOPEG_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01980;old_locus_tag=SOPEG_0388 NZ_CP006568.1 Protein Homology CDS 370942 372969 . - 0 ID=cds394;Parent=gene399;Dbxref=Genbank:WP_025244119.1;Name=WP_025244119.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_025244119.1;transl_table=11 NZ_CP006568.1 RefSeq gene 373191 374669 . - . ID=gene400;Name=SOPEG_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01985;old_locus_tag=SOPEG_0389 NZ_CP006568.1 Protein Homology CDS 373191 374669 . - 0 ID=cds395;Parent=gene400;Dbxref=Genbank:WP_025244120.1;Name=WP_025244120.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_025244120.1;transl_table=11 NZ_CP006568.1 RefSeq gene 374865 375752 . + . ID=gene401;Name=SOPEG_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS01990;old_locus_tag=SOPEG_0390 NZ_CP006568.1 Protein Homology CDS 374865 375752 . + 0 ID=cds396;Parent=gene401;Dbxref=Genbank:WP_025244121.1;Name=WP_025244121.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244121.1;transl_table=11 NZ_CP006568.1 RefSeq gene 375802 376975 . - . ID=gene402;Name=SOPEG_RS01995;end_range=376975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS01995;partial=true;pseudo=true;start_range=.,375802 NZ_CP006568.1 Protein Homology CDS 375802 376975 . - 0 ID=cds397;Parent=gene402;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;end_range=376975,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=threonine dehydratase;pseudo=true;start_range=.,375802;transl_except=(pos:complement(376727..376729)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 376919 378568 . - . ID=gene403;Name=SOPEG_RS02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02000;partial=true;pseudo=true;start_range=.,376919 NZ_CP006568.1 Protein Homology CDS 376919 378568 . - 0 ID=cds398;Parent=gene403;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=dihydroxy-acid dehydratase;pseudo=true;start_range=.,376919;transl_table=11 NZ_CP006568.1 RefSeq gene 378634 379572 . - . ID=gene404;Name=SOPEG_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02005;old_locus_tag=SOPEG_0393 NZ_CP006568.1 Protein Homology CDS 378634 379572 . - 0 ID=cds399;Parent=gene404;Dbxref=Genbank:WP_025244122.1;Name=WP_025244122.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_025244122.1;transl_table=11 NZ_CP006568.1 RefSeq gene 379595 379852 . - . ID=gene405;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=SOPEG_RS02010;old_locus_tag=SOPEG_0394 NZ_CP006568.1 Protein Homology CDS 379595 379852 . - 0 ID=cds400;Parent=gene405;Dbxref=Genbank:WP_025244123.1;Name=WP_025244123.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase 2 regulatory subunit;protein_id=WP_025244123.1;transl_table=11 NZ_CP006568.1 RefSeq gene 379849 381342 . - . ID=gene406;Name=SOPEG_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02015 NZ_CP006568.1 Protein Homology CDS 379849 381342 . - 0 ID=cds401;Parent=gene406;Dbxref=Genbank:WP_025244124.1;Name=WP_025244124.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase catalytic subunit;protein_id=WP_025244124.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 382153 383476 . + . ID=id50;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 382228 383436 . + . ID=gene407;Name=SOPEG_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02020;old_locus_tag=SOPEG_0396 NZ_CP006568.1 Protein Homology CDS 382228 383436 . + 0 ID=cds402;Parent=gene407;Dbxref=Genbank:WP_025244125.1;Name=WP_025244125.1;gbkey=CDS;product=transposase;protein_id=WP_025244125.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 383776 384839 . + . ID=id51;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 383837 383977 . - . ID=gene408;Name=SOPEG_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02025 NZ_CP006568.1 Protein Homology CDS 383837 383977 . - 0 ID=cds403;Parent=gene408;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 383939 384761 . - . ID=gene409;Name=SOPEG_RS22410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22410;old_locus_tag=SOPEG_ps0398;partial=true;pseudo=true;start_range=.,383939 NZ_CP006568.1 Protein Homology CDS 383939 384761 . - 0 ID=cds404;Parent=gene409;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,383939;transl_except=(pos:complement(384362..384364)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 384950 386014 . + . ID=id52;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 385012 385935 . - . ID=gene410;Name=SOPEG_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02035;old_locus_tag=SOPEG_0399 NZ_CP006568.1 Protein Homology CDS 385012 385935 . - 0 ID=cds405;Parent=gene410;Dbxref=Genbank:WP_025244127.1;Name=WP_025244127.1;gbkey=CDS;product=transposase;protein_id=WP_025244127.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 386235 387297 . + . ID=id53;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 386314 387237 . + . ID=gene411;Name=SOPEG_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02040;old_locus_tag=SOPEG_0401 NZ_CP006568.1 Protein Homology CDS 386314 387237 . + 0 ID=cds406;Parent=gene411;Dbxref=Genbank:WP_025243942.1;Name=WP_025243942.1;gbkey=CDS;product=transposase;protein_id=WP_025243942.1;transl_table=11 NZ_CP006568.1 RefSeq gene 387882 389175 . - . ID=gene412;Name=SOPEG_RS02045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02045;pseudo=true NZ_CP006568.1 Protein Homology CDS 387882 389175 . - 0 ID=cds407;Parent=gene412;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellin;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 389622 390170 . + . ID=gene413;Name=SOPEG_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02050 NZ_CP006568.1 Protein Homology CDS 389622 390170 . + 0 ID=cds408;Parent=gene413;Dbxref=Genbank:WP_025244128.1;Name=WP_025244128.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244128.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 390154 391218 . + . ID=id54;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 390235 391158 . + . ID=gene414;Name=SOPEG_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02055;old_locus_tag=SOPEG_0403 NZ_CP006568.1 Protein Homology CDS 390235 391158 . + 0 ID=cds409;Parent=gene414;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 391536 392601 . + . ID=id55;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 391596 392519 . - . ID=gene415;Name=SOPEG_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02065;old_locus_tag=SOPEG_0405 NZ_CP006568.1 Protein Homology CDS 391596 392519 . - 0 ID=cds410;Parent=gene415;Dbxref=Genbank:WP_025244129.1;Name=WP_025244129.1;gbkey=CDS;product=transposase;protein_id=WP_025244129.1;transl_table=11 NZ_CP006568.1 RefSeq gene 392596 392829 . - . ID=gene416;Name=SOPEG_RS02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02070;partial=true;pseudo=true;start_range=.,392596 NZ_CP006568.1 Protein Homology CDS 392596 392829 . - 0 ID=cds411;Parent=gene416;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=flagellar hook-basal body protein FliE;pseudo=true;start_range=.,392596;transl_table=11 NZ_CP006568.1 RefSeq gene 393072 394769 . + . ID=gene417;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=SOPEG_RS02075;old_locus_tag=SOPEG_0406 NZ_CP006568.1 Protein Homology CDS 393072 394769 . + 0 ID=cds412;Parent=gene417;Dbxref=Genbank:WP_025244131.1;Name=WP_025244131.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;gbkey=CDS;gene=fliF;product=flagellar MS-ring protein;protein_id=WP_025244131.1;transl_table=11 NZ_CP006568.1 RefSeq gene 394766 395755 . + . ID=gene418;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=SOPEG_RS02080;old_locus_tag=SOPEG_0407 NZ_CP006568.1 Protein Homology CDS 394766 395755 . + 0 ID=cds413;Parent=gene418;Dbxref=Genbank:WP_025244132.1;Name=WP_025244132.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein G;protein_id=WP_025244132.1;transl_table=11 NZ_CP006568.1 RefSeq gene 395748 396461 . + . ID=gene419;Name=SOPEG_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02085;old_locus_tag=SOPEG_0408 NZ_CP006568.1 Protein Homology CDS 395748 396461 . + 0 ID=cds414;Parent=gene419;Dbxref=Genbank:WP_025244133.1;Name=WP_025244133.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244133.1;transl_table=11 NZ_CP006568.1 RefSeq gene 396433 397809 . + . ID=gene420;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=SOPEG_RS02090;old_locus_tag=SOPEG_0409 NZ_CP006568.1 Protein Homology CDS 396433 397809 . + 0 ID=cds415;Parent=gene420;Dbxref=Genbank:WP_025244134.1;Name=WP_025244134.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_025244134.1;transl_table=11 NZ_CP006568.1 RefSeq gene 397820 399502 . + . ID=gene421;Name=SOPEG_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22415;old_locus_tag=SOPEG_0411 NZ_CP006568.1 Protein Homology CDS 397820 399502 . + 0 ID=cds416;Parent=gene421;Dbxref=Genbank:WP_025244135.1;Name=WP_025244135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244135.1;transl_table=11 NZ_CP006568.1 RefSeq gene 399635 400123 . + . ID=gene422;Name=SOPEG_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02100;old_locus_tag=SOPEG_0412 NZ_CP006568.1 Protein Homology CDS 399635 400123 . + 0 ID=cds417;Parent=gene422;Dbxref=Genbank:WP_025244136.1;Name=WP_025244136.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_025244136.1;transl_table=11 NZ_CP006568.1 RefSeq gene 400129 401142 . + . ID=gene423;Name=SOPEG_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02105;old_locus_tag=SOPEG_0413 NZ_CP006568.1 Protein Homology CDS 400129 401142 . + 0 ID=cds418;Parent=gene423;Dbxref=Genbank:WP_025244137.1;Name=WP_025244137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244137.1;transl_table=11 NZ_CP006568.1 RefSeq gene 401135 401539 . + . ID=gene424;Name=SOPEG_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02110;old_locus_tag=SOPEG_0414 NZ_CP006568.1 Protein Homology CDS 401135 401539 . + 0 ID=cds419;Parent=gene424;Dbxref=Genbank:WP_025244138.1;Name=WP_025244138.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_025244138.1;transl_table=11 NZ_CP006568.1 RefSeq gene 401540 401914 . + . ID=gene425;Name=SOPEG_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02115;old_locus_tag=SOPEG_0415 NZ_CP006568.1 Protein Homology CDS 401540 401914 . + 0 ID=cds420;Parent=gene425;Dbxref=Genbank:WP_025244139.1;Name=WP_025244139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244139.1;transl_table=11 NZ_CP006568.1 RefSeq gene 401983 402711 . + . ID=gene426;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=SOPEG_RS02120;old_locus_tag=SOPEG_0416 NZ_CP006568.1 Protein Homology CDS 401983 402711 . + 0 ID=cds421;Parent=gene426;Dbxref=Genbank:WP_038469396.1;Name=WP_038469396.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein flip;protein_id=WP_038469396.1;transl_table=11 NZ_CP006568.1 RefSeq gene 402730 403000 . + . ID=gene427;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=pseudogene;locus_tag=SOPEG_RS02125;pseudo=true NZ_CP006568.1 Protein Homology CDS 402730 403000 . + 0 ID=cds422;Parent=gene427;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 403006 403794 . + . ID=gene428;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=SOPEG_RS02130;old_locus_tag=SOPEG_0418 NZ_CP006568.1 Protein Homology CDS 403006 403794 . + 0 ID=cds423;Parent=gene428;Dbxref=Genbank:WP_025244141.1;Name=WP_025244141.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_025244141.1;transl_table=11 NZ_CP006568.1 RefSeq gene 403844 404782 . - . ID=gene429;Name=SOPEG_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02135;old_locus_tag=SOPEG_0419 NZ_CP006568.1 Protein Homology CDS 403844 404782 . - 0 ID=cds424;Parent=gene429;Dbxref=Genbank:WP_025244142.1;Name=WP_025244142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244142.1;transl_table=11 NZ_CP006568.1 RefSeq gene 404840 406510 . - . ID=gene430;Name=SOPEG_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02140;old_locus_tag=SOPEG_0420 NZ_CP006568.1 Protein Homology CDS 404840 406510 . - 0 ID=cds425;Parent=gene430;Dbxref=Genbank:WP_025244143.1;Name=WP_025244143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244143.1;transl_table=11 NZ_CP006568.1 RefSeq gene 406619 407299 . - . ID=gene431;Name=SOPEG_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02145 NZ_CP006568.1 Protein Homology CDS 406619 407299 . - 0 ID=cds426;Parent=gene431;Dbxref=Genbank:WP_025244144.1;Name=WP_025244144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244144.1;transl_table=11 NZ_CP006568.1 RefSeq gene 407299 408396 . - . ID=gene432;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=SOPEG_RS02150;old_locus_tag=SOPEG_0422 NZ_CP006568.1 Protein Homology CDS 407299 408396 . - 0 ID=cds427;Parent=gene432;Dbxref=Genbank:WP_025244145.1;Name=WP_025244145.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_025244145.1;transl_table=11 NZ_CP006568.1 RefSeq gene 408427 409107 . - . ID=gene433;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=SOPEG_RS02155 NZ_CP006568.1 Protein Homology CDS 408427 409107 . - 0 ID=cds428;Parent=gene433;Dbxref=Genbank:WP_051419390.1;Name=WP_051419390.1;Note=part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod;gbkey=CDS;gene=flgH;product=flagellar basal body L-ring protein;protein_id=WP_051419390.1;transl_table=11 NZ_CP006568.1 RefSeq gene 409259 410041 . - . ID=gene434;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=SOPEG_RS02160;old_locus_tag=SOPEG_0424 NZ_CP006568.1 Protein Homology CDS 409259 410041 . - 0 ID=cds429;Parent=gene434;Dbxref=Genbank:WP_025244147.1;Name=WP_025244147.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_025244147.1;transl_table=11 NZ_CP006568.1 RefSeq gene 410062 410820 . - . ID=gene435;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=SOPEG_RS02165;old_locus_tag=SOPEG_0425 NZ_CP006568.1 Protein Homology CDS 410062 410820 . - 0 ID=cds430;Parent=gene435;Dbxref=Genbank:WP_025244148.1;Name=WP_025244148.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_025244148.1;transl_table=11 NZ_CP006568.1 RefSeq gene 410833 412056 . - . ID=gene436;Name=SOPEG_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02170;old_locus_tag=SOPEG_0426 NZ_CP006568.1 Protein Homology CDS 410833 412056 . - 0 ID=cds431;Parent=gene436;Dbxref=Genbank:WP_025244149.1;Name=WP_025244149.1;gbkey=CDS;product=flagellar hook protein FlgE;protein_id=WP_025244149.1;transl_table=11 NZ_CP006568.1 RefSeq gene 412108 412929 . - . ID=gene437;Name=SOPEG_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02175 NZ_CP006568.1 Protein Homology CDS 412108 412929 . - 0 ID=cds432;Parent=gene437;Dbxref=Genbank:WP_025244150.1;Name=WP_025244150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244150.1;transl_table=11 NZ_CP006568.1 RefSeq gene 412941 413264 . - . ID=gene438;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=pseudogene;locus_tag=SOPEG_RS02180;pseudo=true NZ_CP006568.1 Protein Homology CDS 412941 413264 . - 0 ID=cds433;Parent=gene438;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar biosynthesis protein FlgC;pseudo=true;transl_except=(pos:complement(413250..413252)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 413290 414353 . + . ID=id56;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 413370 414293 . + . ID=gene439;Name=SOPEG_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02185;old_locus_tag=SOPEG_0429 NZ_CP006568.1 Protein Homology CDS 413370 414293 . + 0 ID=cds434;Parent=gene439;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 414370 414969 . + . ID=gene440;Name=SOPEG_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02190 NZ_CP006568.1 Protein Homology CDS 414370 414969 . + 0 ID=cds435;Parent=gene440;Dbxref=Genbank:WP_025244152.1;Name=WP_025244152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244152.1;transl_table=11 NZ_CP006568.1 RefSeq gene 415014 415289 . + . ID=gene441;Name=SOPEG_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02195;old_locus_tag=SOPEG_0431 NZ_CP006568.1 Protein Homology CDS 415014 415289 . + 0 ID=cds436;Parent=gene441;Dbxref=Genbank:WP_025244153.1;Name=WP_025244153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244153.1;transl_table=11 NZ_CP006568.1 RefSeq gene 415328 415771 . + . ID=gene442;Name=SOPEG_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02200;old_locus_tag=SOPEG_0432 NZ_CP006568.1 Protein Homology CDS 415328 415771 . + 0 ID=cds437;Parent=gene442;Dbxref=Genbank:WP_025244154.1;Name=WP_025244154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244154.1;transl_table=11 NZ_CP006568.1 RefSeq gene 416161 418257 . - . ID=gene443;Name=SOPEG_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02205;old_locus_tag=SOPEG_0433 NZ_CP006568.1 Protein Homology CDS 416161 418257 . - 0 ID=cds438;Parent=gene443;Dbxref=Genbank:WP_025244155.1;Name=WP_025244155.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_025244155.1;transl_table=11 NZ_CP006568.1 RefSeq gene 418238 419396 . - . ID=gene444;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=pseudogene;locus_tag=SOPEG_RS02210;pseudo=true NZ_CP006568.1 Protein Homology CDS 418238 419396 . - 0 ID=cds439;Parent=gene444;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 419755 420648 . - . ID=gene445;Name=motB;gbkey=Gene;gene=motB;gene_biotype=pseudogene;locus_tag=SOPEG_RS02215;old_locus_tag=SOPEG_0435;partial=true;pseudo=true;start_range=.,419755 NZ_CP006568.1 Protein Homology CDS 419755 420648 . - 0 ID=cds440;Parent=gene445;Note=with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;exception=unextendable partial coding region;gbkey=CDS;gene=motB;partial=true;product=flagellar motor protein MotB;pseudo=true;start_range=.,419755;transl_table=11 NZ_CP006568.1 RefSeq gene 420645 421508 . - . ID=gene446;Name=SOPEG_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02220 NZ_CP006568.1 Protein Homology CDS 420645 421508 . - 0 ID=cds441;Parent=gene446;Dbxref=Genbank:WP_051419391.1;Name=WP_051419391.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_051419391.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 421488 422558 . + . ID=id57;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 421552 422475 . - . ID=gene447;Name=SOPEG_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02225;old_locus_tag=SOPEG_0437 NZ_CP006568.1 Protein Homology CDS 421552 422475 . - 0 ID=cds442;Parent=gene447;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 422707 423279 . - . ID=gene448;Name=SOPEG_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02230;old_locus_tag=SOPEG_0438 NZ_CP006568.1 Protein Homology CDS 422707 423279 . - 0 ID=cds443;Parent=gene448;Dbxref=Genbank:WP_038468082.1;Name=WP_038468082.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038468082.1;transl_table=11 NZ_CP006568.1 RefSeq gene 423309 423647 . - . ID=gene449;Name=SOPEG_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02235 NZ_CP006568.1 Protein Homology CDS 423309 423647 . - 0 ID=cds444;Parent=gene449;Dbxref=Genbank:WP_025244159.1;Name=WP_025244159.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244159.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 424288 425349 . + . ID=id58;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 424347 425270 . - . ID=gene450;Name=SOPEG_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02240;old_locus_tag=SOPEG_0440 NZ_CP006568.1 Protein Homology CDS 424347 425270 . - 0 ID=cds445;Parent=gene450;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 425734 425810 . - . ID=gene451;Name=SOPEG_RS02245;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS02245;old_locus_tag=SOPEG_t0441 NZ_CP006568.1 tRNAscan-SE tRNA 425734 425810 . - . ID=rna5;Parent=gene451;anticodon=(pos:complement(425774..425776));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 tRNAscan-SE exon 425734 425810 . - . ID=id59;Parent=rna5;anticodon=(pos:complement(425774..425776));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 RefSeq gene 425892 427595 . - . ID=gene452;Name=SOPEG_RS02250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02250;pseudo=true NZ_CP006568.1 Protein Homology CDS 425892 427595 . - 0 ID=cds446;Parent=gene452;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;pseudo=true;transl_except=(pos:complement(427218..427220)%2Caa:Other),(pos:complement(427050..427052)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 427723 428787 . + . ID=id60;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 427803 428726 . + . ID=gene453;Name=SOPEG_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02255;old_locus_tag=SOPEG_0443 NZ_CP006568.1 Protein Homology CDS 427803 428726 . + 0 ID=cds447;Parent=gene453;Dbxref=Genbank:WP_025244161.1;Name=WP_025244161.1;gbkey=CDS;product=transposase;protein_id=WP_025244161.1;transl_table=11 NZ_CP006568.1 RefSeq gene 428833 429096 . + . ID=gene454;Name=SOPEG_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02260 NZ_CP006568.1 Protein Homology CDS 428833 429096 . + 0 ID=cds448;Parent=gene454;Dbxref=Genbank:WP_025244162.1;Name=WP_025244162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244162.1;transl_table=11 NZ_CP006568.1 RefSeq gene 429299 429976 . + . ID=gene455;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=SOPEG_RS02265;old_locus_tag=SOPEG_0445 NZ_CP006568.1 Protein Homology CDS 429299 429976 . + 0 ID=cds449;Parent=gene455;Dbxref=Genbank:WP_051419987.1;Name=WP_051419987.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_051419987.1;transl_table=11 NZ_CP006568.1 RefSeq gene 430562 432168 . + . ID=gene456;Name=SOPEG_RS02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02270;pseudo=true NZ_CP006568.1 Protein Homology CDS 430562 432168 . + 0 ID=cds450;Parent=gene456;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 432369 433367 . + . ID=gene457;Name=SOPEG_RS02275;end_range=433367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02275;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 432369 433367 . + 0 ID=cds451;Parent=gene457;end_range=433367,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 433489 433950 . + . ID=gene458;Name=SOPEG_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02280 NZ_CP006568.1 Protein Homology CDS 433489 433950 . + 0 ID=cds452;Parent=gene458;Dbxref=Genbank:WP_038468085.1;Name=WP_038468085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468085.1;transl_table=11 NZ_CP006568.1 RefSeq gene 433961 434941 . + . ID=gene459;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=SOPEG_RS02285;old_locus_tag=SOPEG_0449 NZ_CP006568.1 Protein Homology CDS 433961 434941 . + 0 ID=cds453;Parent=gene459;Dbxref=Genbank:WP_025244164.1;Name=WP_025244164.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_025244164.1;transl_table=11 NZ_CP006568.1 RefSeq gene 434938 435847 . + . ID=gene460;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=pseudogene;locus_tag=SOPEG_RS02290;pseudo=true NZ_CP006568.1 Protein Homology CDS 434938 435847 . + 0 ID=cds454;Parent=gene460;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 436081 437797 . + . ID=id61;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 436507 437255 . - . ID=gene461;Name=SOPEG_RS02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02295;pseudo=true NZ_CP006568.1 Protein Homology CDS 436507 437255 . - 0 ID=cds455;Parent=gene461;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 437248 437781 . - . ID=gene462;Name=SOPEG_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02300 NZ_CP006568.1 Protein Homology CDS 437248 437781 . - 0 ID=cds456;Parent=gene462;Dbxref=Genbank:WP_038468088.1;Name=WP_038468088.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468088.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 438010 439074 . + . ID=id62;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 438091 439014 . + . ID=gene463;Name=SOPEG_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02305;old_locus_tag=SOPEG_0453 NZ_CP006568.1 Protein Homology CDS 438091 439014 . + 0 ID=cds457;Parent=gene463;Dbxref=Genbank:WP_025244166.1;Name=WP_025244166.1;gbkey=CDS;product=transposase;protein_id=WP_025244166.1;transl_table=11 NZ_CP006568.1 RefSeq gene 439120 439425 . + . ID=gene464;Name=SOPEG_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02310 NZ_CP006568.1 Protein Homology CDS 439120 439425 . + 0 ID=cds458;Parent=gene464;Dbxref=Genbank:WP_025244167.1;Name=WP_025244167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244167.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 440005 441308 . + . ID=id63;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 440250 441173 . + . ID=gene465;Name=SOPEG_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02315;old_locus_tag=SOPEG_0455 NZ_CP006568.1 Protein Homology CDS 440250 441173 . + 0 ID=cds459;Parent=gene465;Dbxref=Genbank:WP_025244168.1;Name=WP_025244168.1;gbkey=CDS;product=transposase;protein_id=WP_025244168.1;transl_table=11 NZ_CP006568.1 RefSeq gene 441971 444565 . + . ID=gene466;Name=narZ;end_range=444565,.;gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=SOPEG_RS02320;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 441971 444565 . + 0 ID=cds460;Parent=gene466;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels;end_range=444565,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=narZ;partial=true;product=nitrate reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 444630 445218 . + . ID=gene467;Name=SOPEG_RS02325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02325;pseudo=true NZ_CP006568.1 Protein Homology CDS 444630 445218 . + 0 ID=cds461;Parent=gene467;exception=annotated by transcript or proteomic data;gbkey=CDS;product=molybdopterin dinucleotide-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 445215 446761 . + . ID=gene468;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=SOPEG_RS02330;pseudo=true NZ_CP006568.1 Protein Homology CDS 445215 446761 . + 0 ID=cds462;Parent=gene468;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=narH;product=nitrate reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 446758 447198 . + . ID=gene469;Name=SOPEG_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02335 NZ_CP006568.1 Protein Homology CDS 446758 447198 . + 0 ID=cds463;Parent=gene469;Dbxref=Genbank:WP_025244169.1;Name=WP_025244169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244169.1;transl_table=11 NZ_CP006568.1 RefSeq gene 447198 447503 . + . ID=gene470;Name=SOPEG_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02340 NZ_CP006568.1 Protein Homology CDS 447198 447503 . + 0 ID=cds464;Parent=gene470;Dbxref=Genbank:WP_025244170.1;Name=WP_025244170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244170.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 447374 449955 . + . ID=id64;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 447553 449070 . + . ID=gene471;Name=SOPEG_RS02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02345;pseudo=true NZ_CP006568.1 Protein Homology CDS 447553 449070 . + 0 ID=cds465;Parent=gene471;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:448330..448332%2Caa:Other),(pos:448806..448808%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 449097 449832 . + . ID=gene472;Name=SOPEG_RS02350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02350;pseudo=true NZ_CP006568.1 Protein Homology CDS 449097 449832 . + 0 ID=cds466;Parent=gene472;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 449913 450146 . + . ID=gene473;Name=SOPEG_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02355 NZ_CP006568.1 Protein Homology CDS 449913 450146 . + 0 ID=cds467;Parent=gene473;Dbxref=Genbank:WP_025244171.1;Name=WP_025244171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244171.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 450185 450289 . + . ID=id65;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 450845 460199 . + . ID=id66;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 450923 451318 . + . ID=gene474;Name=SOPEG_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02360 NZ_CP006568.1 Protein Homology CDS 450923 451318 . + 0 ID=cds468;Parent=gene474;Dbxref=Genbank:WP_025244172.1;Name=WP_025244172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244172.1;transl_table=11 NZ_CP006568.1 RefSeq gene 451536 451841 . + . ID=gene475;Name=SOPEG_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02365 NZ_CP006568.1 Protein Homology CDS 451536 451841 . + 0 ID=cds469;Parent=gene475;Dbxref=Genbank:WP_038468091.1;Name=WP_038468091.1;gbkey=CDS;product=transposase;protein_id=WP_038468091.1;transl_table=11 NZ_CP006568.1 RefSeq gene 451874 453061 . - . ID=gene476;Name=SOPEG_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02370 NZ_CP006568.1 Protein Homology CDS 451874 453061 . - 0 ID=cds470;Parent=gene476;Dbxref=Genbank:WP_038468094.1;Name=WP_038468094.1;gbkey=CDS;product=transposase;protein_id=WP_038468094.1;transl_table=11 NZ_CP006568.1 RefSeq gene 453550 453819 . + . ID=gene477;Name=narI;gbkey=Gene;gene=narI;gene_biotype=pseudogene;locus_tag=SOPEG_RS02375;partial=true;pseudo=true;start_range=.,453550 NZ_CP006568.1 Protein Homology CDS 453550 453819 . + 0 ID=cds471;Parent=gene477;Note=with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;exception=unextendable partial coding region;gbkey=CDS;gene=narI;partial=true;product=nitrate reductase;pseudo=true;start_range=.,453550;transl_table=11 NZ_CP006568.1 RefSeq gene 453975 454982 . - . ID=gene478;Name=SOPEG_RS02380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02380;pseudo=true NZ_CP006568.1 Protein Homology CDS 453975 454982 . - 0 ID=cds472;Parent=gene478;gbkey=CDS;product=endoglucanase;pseudo=true;transl_except=(pos:complement(454752..454754)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 455011 455358 . - . ID=gene479;Name=SOPEG_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02385 NZ_CP006568.1 Protein Homology CDS 455011 455358 . - 0 ID=cds473;Parent=gene479;Dbxref=Genbank:WP_051419392.1;Name=WP_051419392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419392.1;transl_table=11 NZ_CP006568.1 RefSeq gene 455439 458483 . - . ID=gene480;Name=SOPEG_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02390 NZ_CP006568.1 Protein Homology CDS 455439 458483 . - 0 ID=cds474;Parent=gene480;Dbxref=Genbank:WP_025244174.1;Name=WP_025244174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244174.1;transl_table=11 NZ_CP006568.1 RefSeq gene 458521 458805 . - . ID=gene481;Name=SOPEG_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22420 NZ_CP006568.1 GeneMarkS+ CDS 458521 458805 . - 0 ID=cds475;Parent=gene481;Dbxref=Genbank:WP_051419393.1;Name=WP_051419393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419393.1;transl_table=11 NZ_CP006568.1 RefSeq gene 458805 458999 . - . ID=gene482;Name=SOPEG_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22425 NZ_CP006568.1 GeneMarkS+ CDS 458805 458999 . - 0 ID=cds476;Parent=gene482;Dbxref=Genbank:WP_051419394.1;Name=WP_051419394.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419394.1;transl_table=11 NZ_CP006568.1 RefSeq gene 458989 460404 . - . ID=gene483;Name=SOPEG_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02395 NZ_CP006568.1 Protein Homology CDS 458989 460404 . - 0 ID=cds477;Parent=gene483;Dbxref=Genbank:WP_051419395.1;Name=WP_051419395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419395.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 460416 464230 . + . ID=id67;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 460443 461909 . - . ID=gene484;Name=SOPEG_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02400 NZ_CP006568.1 Protein Homology CDS 460443 461909 . - 0 ID=cds478;Parent=gene484;Dbxref=Genbank:WP_025244175.1;Name=WP_025244175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244175.1;transl_table=11 NZ_CP006568.1 RefSeq gene 461965 462888 . - . ID=gene485;Name=SOPEG_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02405;old_locus_tag=SOPEG_0470 NZ_CP006568.1 Protein Homology CDS 461965 462888 . - 0 ID=cds479;Parent=gene485;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 462953 463165 . - . ID=gene486;Name=SOPEG_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02410 NZ_CP006568.1 GeneMarkS+ CDS 462953 463165 . - 0 ID=cds480;Parent=gene486;Dbxref=Genbank:WP_025244176.1;Name=WP_025244176.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244176.1;transl_table=11 NZ_CP006568.1 RefSeq gene 463224 464147 . - . ID=gene487;Name=SOPEG_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02415;old_locus_tag=SOPEG_0471 NZ_CP006568.1 Protein Homology CDS 463224 464147 . - 0 ID=cds481;Parent=gene487;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 464372 465981 . + . ID=id68;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 464430 465353 . - . ID=gene488;Name=SOPEG_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02420;old_locus_tag=SOPEG_0473 NZ_CP006568.1 Protein Homology CDS 464430 465353 . - 0 ID=cds482;Parent=gene488;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 465401 465901 . - . ID=gene489;Name=SOPEG_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02425 NZ_CP006568.1 Protein Homology CDS 465401 465901 . - 0 ID=cds483;Parent=gene489;Dbxref=Genbank:WP_025244177.1;Name=WP_025244177.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244177.1;transl_table=11 NZ_CP006568.1 RefSeq gene 466415 466879 . - . ID=gene490;Name=SOPEG_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02430 NZ_CP006568.1 Protein Homology CDS 466415 466879 . - 0 ID=cds484;Parent=gene490;Dbxref=Genbank:WP_025244178.1;Name=WP_025244178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244178.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 466879 468202 . + . ID=id69;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 467082 468164 . + . ID=gene491;Name=SOPEG_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02435 NZ_CP006568.1 Protein Homology CDS 467082 468164 . + 0 ID=cds485;Parent=gene491;Dbxref=Genbank:WP_025244179.1;Name=WP_025244179.1;gbkey=CDS;product=transposase;protein_id=WP_025244179.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 468363 469425 . + . ID=id70;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 468442 469014 . + . ID=gene492;Name=SOPEG_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02440 NZ_CP006568.1 Protein Homology CDS 468442 469014 . + 0 ID=cds486;Parent=gene492;Dbxref=Genbank:WP_038468100.1;Name=WP_038468100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468100.1;transl_table=11 NZ_CP006568.1 RefSeq gene 469225 469365 . + . ID=gene493;Name=SOPEG_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02445 NZ_CP006568.1 Protein Homology CDS 469225 469365 . + 0 ID=cds487;Parent=gene493;Dbxref=Genbank:WP_051419988.1;Name=WP_051419988.1;gbkey=CDS;product=cytoplasmic protein;protein_id=WP_051419988.1;transl_table=11 NZ_CP006568.1 RefSeq gene 469445 469651 . + . ID=gene494;Name=SOPEG_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02450 NZ_CP006568.1 Protein Homology CDS 469445 469651 . + 0 ID=cds488;Parent=gene494;Dbxref=Genbank:WP_025244180.1;Name=WP_025244180.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244180.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 469650 473182 . + . ID=id71;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 469730 470938 . + . ID=gene495;Name=SOPEG_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02455;old_locus_tag=SOPEG_0478 NZ_CP006568.1 Protein Homology CDS 469730 470938 . + 0 ID=cds489;Parent=gene495;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 471039 471962 . + . ID=gene496;Name=SOPEG_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02460;old_locus_tag=SOPEG_0479 NZ_CP006568.1 Protein Homology CDS 471039 471962 . + 0 ID=cds490;Parent=gene496;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 472327 473072 . + . ID=gene497;Name=SOPEG_RS02465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02465;pseudo=true NZ_CP006568.1 Protein Homology CDS 472327 473072 . + 0 ID=cds491;Parent=gene497;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 473475 473843 . - . ID=gene498;Name=SOPEG_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02470;old_locus_tag=SOPEG_0481 NZ_CP006568.1 Protein Homology CDS 473475 473843 . - 0 ID=cds492;Parent=gene498;Dbxref=Genbank:WP_038468103.1;Name=WP_038468103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468103.1;transl_table=11 NZ_CP006568.1 RefSeq gene 474135 475186 . + . ID=gene499;Name=SOPEG_RS02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02475;pseudo=true NZ_CP006568.1 Protein Homology CDS 474135 475186 . + 0 ID=cds493;Parent=gene499;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 475253 476005 . - . ID=gene500;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SOPEG_RS02480;old_locus_tag=SOPEG_0483 NZ_CP006568.1 Protein Homology CDS 475253 476005 . - 0 ID=cds494;Parent=gene500;Dbxref=Genbank:WP_025244183.1;Name=WP_025244183.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=WP_025244183.1;transl_table=11 NZ_CP006568.1 RefSeq gene 476771 477811 . - . ID=gene501;Name=SOPEG_RS02485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02485;partial=true;pseudo=true;start_range=.,476771 NZ_CP006568.1 Protein Homology CDS 476771 477811 . - 0 ID=cds495;Parent=gene501;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=galactokinase;pseudo=true;start_range=.,476771;transl_table=11 NZ_CP006568.1 RefSeq gene 477808 478641 . - . ID=gene502;Name=SOPEG_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02490 NZ_CP006568.1 Protein Homology CDS 477808 478641 . - 0 ID=cds496;Parent=gene502;Dbxref=Genbank:WP_025244185.1;Name=WP_025244185.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_025244185.1;transl_table=11 NZ_CP006568.1 RefSeq gene 478684 479661 . - . ID=gene503;Name=SOPEG_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02495;old_locus_tag=SOPEG_0486 NZ_CP006568.1 Protein Homology CDS 478684 479661 . - 0 ID=cds497;Parent=gene503;Dbxref=Genbank:WP_038468106.1;Name=WP_038468106.1;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=WP_038468106.1;transl_table=11 NZ_CP006568.1 RefSeq gene 479955 481415 . - . ID=gene504;Name=SOPEG_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02500;old_locus_tag=SOPEG_0487 NZ_CP006568.1 Protein Homology CDS 479955 481415 . - 0 ID=cds498;Parent=gene504;Dbxref=Genbank:WP_025244186.1;Name=WP_025244186.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_025244186.1;transl_table=11 NZ_CP006568.1 RefSeq gene 481472 482268 . - . ID=gene505;Name=SOPEG_RS02505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02505;pseudo=true NZ_CP006568.1 Protein Homology CDS 481472 482268 . - 0 ID=cds499;Parent=gene505;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 482267 482608 . + . ID=gene506;Name=SOPEG_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22430;old_locus_tag=SOPEG_0489 NZ_CP006568.1 Protein Homology CDS 482267 482608 . + 0 ID=cds500;Parent=gene506;Dbxref=Genbank:WP_051419396.1;Name=WP_051419396.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419396.1;transl_table=11 NZ_CP006568.1 RefSeq gene 482993 484102 . + . ID=gene507;Name=SOPEG_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02515;old_locus_tag=SOPEG_0490 NZ_CP006568.1 Protein Homology CDS 482993 484102 . + 0 ID=cds501;Parent=gene507;Dbxref=Genbank:WP_025244188.1;Name=WP_025244188.1;gbkey=CDS;product=D-alanine--D-alanine ligase;protein_id=WP_025244188.1;transl_table=11 NZ_CP006568.1 RefSeq gene 484232 485052 . - . ID=gene508;Name=SOPEG_RS02520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02520;pseudo=true NZ_CP006568.1 Protein Homology CDS 484232 485052 . - 0 ID=cds502;Parent=gene508;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyridoxal phosphate phosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 485252 486241 . + . ID=gene509;Name=SOPEG_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02525;old_locus_tag=SOPEG_0492 NZ_CP006568.1 Protein Homology CDS 485252 486241 . + 0 ID=cds503;Parent=gene509;Dbxref=Genbank:WP_025244189.1;Name=WP_025244189.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_025244189.1;transl_table=11 NZ_CP006568.1 RefSeq gene 486327 486832 . - . ID=gene510;Name=SOPEG_RS02530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02530;pseudo=true NZ_CP006568.1 Protein Homology CDS 486327 486832 . - 0 ID=cds504;Parent=gene510;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=kinase inhibitor;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 486912 487535 . - . ID=gene511;Name=SOPEG_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02535;old_locus_tag=SOPEG_0494 NZ_CP006568.1 Protein Homology CDS 486912 487535 . - 0 ID=cds505;Parent=gene511;Dbxref=Genbank:WP_051419397.1;Name=WP_051419397.1;gbkey=CDS;product=dimethylallyltransferase;protein_id=WP_051419397.1;transl_table=11 NZ_CP006568.1 RefSeq gene 487680 488910 . - . ID=gene512;Name=SOPEG_RS02540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02540;pseudo=true NZ_CP006568.1 Protein Homology CDS 487680 488910 . - 0 ID=cds506;Parent=gene512;Note=catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 489014 489868 . + . ID=gene513;Name=SOPEG_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02545 NZ_CP006568.1 Protein Homology CDS 489014 489868 . + 0 ID=cds507;Parent=gene513;Dbxref=Genbank:WP_025244190.1;Name=WP_025244190.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_025244190.1;transl_table=11 NZ_CP006568.1 RefSeq gene 489868 490652 . + . ID=gene514;Name=SOPEG_RS02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02550;pseudo=true NZ_CP006568.1 Protein Homology CDS 489868 490652 . + 0 ID=cds508;Parent=gene514;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 490621 491386 . + . ID=gene515;Name=SOPEG_RS02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02555;pseudo=true NZ_CP006568.1 Protein Homology CDS 490621 491386 . + 0 ID=cds509;Parent=gene515;exception=annotated by transcript or proteomic data;gbkey=CDS;product=biotin synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 491379 492071 . + . ID=gene516;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=pseudogene;locus_tag=SOPEG_RS02560;pseudo=true NZ_CP006568.1 Protein Homology CDS 491379 492071 . + 0 ID=cds510;Parent=gene516;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;gene=bioD;product=dethiobiotin synthetase;pseudo=true;transl_except=(pos:491451..491453%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 492218 492821 . - . ID=gene517;Name=SOPEG_RS02565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02565;pseudo=true NZ_CP006568.1 Protein Homology CDS 492218 492821 . - 0 ID=cds511;Parent=gene517;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 493581 495298 . + . ID=id72;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 493651 494871 . + . ID=gene518;Name=SOPEG_RS02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02570;pseudo=true NZ_CP006568.1 Protein Homology CDS 493651 494871 . + 0 ID=cds512;Parent=gene518;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:494488..494490%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 495395 497404 . + . ID=gene519;Name=SOPEG_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02575;old_locus_tag=SOPEG_0502 NZ_CP006568.1 Protein Homology CDS 495395 497404 . + 0 ID=cds513;Parent=gene519;Dbxref=Genbank:WP_025244191.1;Name=WP_025244191.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=excinuclease ABC subunit B;protein_id=WP_025244191.1;transl_table=11 NZ_CP006568.1 RefSeq gene 497503 498399 . - . ID=gene520;Name=SOPEG_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02580;old_locus_tag=SOPEG_0503 NZ_CP006568.1 Protein Homology CDS 497503 498399 . - 0 ID=cds514;Parent=gene520;Dbxref=Genbank:WP_025244192.1;Name=WP_025244192.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244192.1;transl_table=11 NZ_CP006568.1 RefSeq gene 498781 499767 . + . ID=gene521;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS02585;old_locus_tag=SOPEG_0504 NZ_CP006568.1 Protein Homology CDS 498781 499767 . + 0 ID=cds515;Parent=gene521;Dbxref=Genbank:WP_025244193.1;Name=WP_025244193.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin phosphate synthase MoaA;protein_id=WP_025244193.1;transl_table=11 NZ_CP006568.1 RefSeq gene 499787 500256 . + . ID=gene522;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=SOPEG_RS02590;pseudo=true NZ_CP006568.1 Protein Homology CDS 499787 500256 . + 0 ID=cds516;Parent=gene522;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein MoaC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 500253 500441 . + . ID=gene523;Name=SOPEG_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02595 NZ_CP006568.1 Protein Homology CDS 500253 500441 . + 0 ID=cds517;Parent=gene523;Dbxref=Genbank:WP_025244194.1;Name=WP_025244194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244194.1;transl_table=11 NZ_CP006568.1 RefSeq gene 500426 500617 . + . ID=gene524;Name=moaE;end_range=500617,.;gbkey=Gene;gene=moaE;gene_biotype=pseudogene;locus_tag=SOPEG_RS02600;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 500426 500617 . + 0 ID=cds518;Parent=gene524;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;end_range=500617,.;exception=unextendable partial coding region;gbkey=CDS;gene=moaE;partial=true;product=molybdenum cofactor biosynthesis protein MoaE;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 500809 501519 . + . ID=gene525;Name=SOPEG_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02605;old_locus_tag=SOPEG_0508 NZ_CP006568.1 Protein Homology CDS 500809 501519 . + 0 ID=cds519;Parent=gene525;Dbxref=Genbank:WP_025246991.1;Name=WP_025246991.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246991.1;transl_table=11 NZ_CP006568.1 RefSeq gene 501537 502504 . + . ID=gene526;Name=SOPEG_RS02610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02610;pseudo=true NZ_CP006568.1 Protein Homology CDS 501537 502504 . + 0 ID=cds520;Parent=gene526;Note=catalyzes the formation of pyruvate from D-cysteine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cysteine desulfhydrase;pseudo=true;transl_except=(pos:502193..502195%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 502501 503252 . + . ID=gene527;Name=SOPEG_RS02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02615;pseudo=true NZ_CP006568.1 Protein Homology CDS 502501 503252 . + 0 ID=cds521;Parent=gene527;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 503469 504698 . + . ID=gene528;Name=SOPEG_RS02620;end_range=504698,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02620;old_locus_tag=SOPEG_0511;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 503469 504698 . + 0 ID=cds522;Parent=gene528;Note=this helicase is not essential cell growth;end_range=504698,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 504930 505582 . + . ID=gene529;Name=SOPEG_RS02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02625;pseudo=true NZ_CP006568.1 Protein Homology CDS 504930 505582 . + 0 ID=cds523;Parent=gene529;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 505702 506568 . + . ID=gene530;Name=SOPEG_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02630 NZ_CP006568.1 Protein Homology CDS 505702 506568 . + 0 ID=cds524;Parent=gene530;Dbxref=Genbank:WP_025244196.1;Name=WP_025244196.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244196.1;transl_table=11 NZ_CP006568.1 RefSeq gene 506774 507601 . + . ID=gene531;Name=SOPEG_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02635;old_locus_tag=SOPEG_0514 NZ_CP006568.1 Protein Homology CDS 506774 507601 . + 0 ID=cds525;Parent=gene531;Dbxref=Genbank:WP_025244197.1;Name=WP_025244197.1;gbkey=CDS;product=cysteine ABC transporter substrate-binding protein;protein_id=WP_025244197.1;transl_table=11 NZ_CP006568.1 RefSeq gene 507646 508434 . + . ID=gene532;Name=SOPEG_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02640;old_locus_tag=SOPEG_0515 NZ_CP006568.1 Protein Homology CDS 507646 508434 . + 0 ID=cds526;Parent=gene532;Dbxref=Genbank:WP_038469454.1;Name=WP_038469454.1;gbkey=CDS;product=ABC transporter;protein_id=WP_038469454.1;transl_table=11 NZ_CP006568.1 RefSeq gene 508431 509186 . + . ID=gene533;Name=SOPEG_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02645;old_locus_tag=SOPEG_0516 NZ_CP006568.1 Protein Homology CDS 508431 509186 . + 0 ID=cds527;Parent=gene533;Dbxref=Genbank:WP_025244199.1;Name=WP_025244199.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244199.1;transl_table=11 NZ_CP006568.1 RefSeq gene 509176 509889 . + . ID=gene534;Name=SOPEG_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02650;old_locus_tag=SOPEG_0517 NZ_CP006568.1 Protein Homology CDS 509176 509889 . + 0 ID=cds528;Parent=gene534;Dbxref=Genbank:WP_025244200.1;Name=WP_025244200.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_025244200.1;transl_table=11 NZ_CP006568.1 RefSeq gene 510077 510559 . - . ID=gene535;Name=SOPEG_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02655;old_locus_tag=SOPEG_0518 NZ_CP006568.1 Protein Homology CDS 510077 510559 . - 0 ID=cds529;Parent=gene535;Dbxref=Genbank:WP_025244201.1;Name=WP_025244201.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_025244201.1;transl_table=11 NZ_CP006568.1 RefSeq gene 510658 511569 . + . ID=gene536;Name=SOPEG_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02660;old_locus_tag=SOPEG_0519 NZ_CP006568.1 Protein Homology CDS 510658 511569 . + 0 ID=cds530;Parent=gene536;Dbxref=Genbank:WP_025244202.1;Name=WP_025244202.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244202.1;transl_table=11 NZ_CP006568.1 RefSeq gene 511631 512050 . + . ID=gene537;Name=SOPEG_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22435 NZ_CP006568.1 GeneMarkS+ CDS 511631 512050 . + 0 ID=cds531;Parent=gene537;Dbxref=Genbank:WP_051419398.1;Name=WP_051419398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419398.1;transl_table=11 NZ_CP006568.1 RefSeq gene 512097 512438 . + . ID=gene538;Name=SOPEG_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22440 NZ_CP006568.1 GeneMarkS+ CDS 512097 512438 . + 0 ID=cds532;Parent=gene538;Dbxref=Genbank:WP_051419399.1;Name=WP_051419399.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419399.1;transl_table=11 NZ_CP006568.1 RefSeq gene 512521 513567 . + . ID=gene539;Name=SOPEG_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22445 NZ_CP006568.1 Protein Homology CDS 512521 513567 . + 0 ID=cds533;Parent=gene539;Dbxref=Genbank:WP_051419400.1;Name=WP_051419400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419400.1;transl_table=11 NZ_CP006568.1 RefSeq gene 513754 513963 . - . ID=gene540;Name=SOPEG_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02670 NZ_CP006568.1 Protein Homology CDS 513754 513963 . - 0 ID=cds534;Parent=gene540;Dbxref=Genbank:WP_025244203.1;Name=WP_025244203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244203.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 513945 516558 . + . ID=id73;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 514149 515135 . + . ID=gene541;Name=SOPEG_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22450 NZ_CP006568.1 Protein Homology CDS 514149 515135 . + 0 ID=cds535;Parent=gene541;Dbxref=Genbank:WP_051419401.1;Name=WP_051419401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419401.1;transl_table=11 NZ_CP006568.1 RefSeq gene 515181 515501 . + . ID=gene542;Name=SOPEG_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22455 NZ_CP006568.1 Protein Homology CDS 515181 515501 . + 0 ID=cds536;Parent=gene542;Dbxref=Genbank:WP_051419402.1;Name=WP_051419402.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419402.1;transl_table=11 NZ_CP006568.1 RefSeq gene 515685 516434 . + . ID=gene543;Name=SOPEG_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02680;old_locus_tag=SOPEG_0523 NZ_CP006568.1 Protein Homology CDS 515685 516434 . + 0 ID=cds537;Parent=gene543;Dbxref=Genbank:WP_025244204.1;Name=WP_025244204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244204.1;transl_table=11 NZ_CP006568.1 RefSeq gene 516775 518169 . - . ID=gene544;Name=SOPEG_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02685;old_locus_tag=SOPEG_0524 NZ_CP006568.1 Protein Homology CDS 516775 518169 . - 0 ID=cds538;Parent=gene544;Dbxref=Genbank:WP_051419403.1;Name=WP_051419403.1;gbkey=CDS;product=RND transporter;protein_id=WP_051419403.1;transl_table=11 NZ_CP006568.1 RefSeq gene 518171 519739 . - . ID=gene545;Name=SOPEG_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02690;old_locus_tag=SOPEG_0525 NZ_CP006568.1 Protein Homology CDS 518171 519739 . - 0 ID=cds539;Parent=gene545;Dbxref=Genbank:WP_025244206.1;Name=WP_025244206.1;gbkey=CDS;product=DSBA oxidoreductase;protein_id=WP_025244206.1;transl_table=11 NZ_CP006568.1 RefSeq gene 519736 520820 . - . ID=gene546;Name=SOPEG_RS02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02695;pseudo=true NZ_CP006568.1 Protein Homology CDS 519736 520820 . - 0 ID=cds540;Parent=gene546;exception=annotated by transcript or proteomic data;gbkey=CDS;product=EmrA;pseudo=true;transl_except=(pos:complement(520132..520134)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 521221 521508 . - . ID=gene547;Name=SOPEG_RS02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02700;partial=true;pseudo=true;start_range=.,521221 NZ_CP006568.1 Protein Homology CDS 521221 521508 . - 0 ID=cds541;Parent=gene547;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutathione S-transferase;pseudo=true;start_range=.,521221;transl_table=11 NZ_CP006568.1 RefSeq gene 521530 522009 . - . ID=gene548;Name=SOPEG_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02705;old_locus_tag=SOPEG_0528 NZ_CP006568.1 Protein Homology CDS 521530 522009 . - 0 ID=cds542;Parent=gene548;Dbxref=Genbank:WP_025244210.1;Name=WP_025244210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244210.1;transl_table=11 NZ_CP006568.1 RefSeq gene 522009 522332 . - . ID=gene549;Name=SOPEG_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02710 NZ_CP006568.1 Protein Homology CDS 522009 522332 . - 0 ID=cds543;Parent=gene549;Dbxref=Genbank:WP_051419404.1;Name=WP_051419404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419404.1;transl_table=11 NZ_CP006568.1 RefSeq gene 522367 523257 . + . ID=gene550;Name=SOPEG_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22460 NZ_CP006568.1 Protein Homology CDS 522367 523257 . + 0 ID=cds544;Parent=gene550;Dbxref=Genbank:WP_051419405.1;Name=WP_051419405.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419405.1;transl_table=11 NZ_CP006568.1 RefSeq gene 523318 523770 . + . ID=gene551;Name=SOPEG_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22465 NZ_CP006568.1 GeneMarkS+ CDS 523318 523770 . + 0 ID=cds545;Parent=gene551;Dbxref=Genbank:WP_051419406.1;Name=WP_051419406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419406.1;transl_table=11 NZ_CP006568.1 RefSeq gene 523899 524737 . + . ID=gene552;Name=SOPEG_RS02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02720;pseudo=true NZ_CP006568.1 Protein Homology CDS 523899 524737 . + 0 ID=cds546;Parent=gene552;exception=annotated by transcript or proteomic data;gbkey=CDS;product=histidine kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 525015 525562 . + . ID=gene553;Name=SOPEG_RS02725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02725;pseudo=true NZ_CP006568.1 Protein Homology CDS 525015 525562 . + 0 ID=cds547;Parent=gene553;exception=annotated by transcript or proteomic data;gbkey=CDS;product=isopentenyl-diphosphate delta-isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 525684 526430 . + . ID=gene554;Name=SOPEG_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02730 NZ_CP006568.1 Protein Homology CDS 525684 526430 . + 0 ID=cds548;Parent=gene554;Dbxref=Genbank:WP_051419407.1;Name=WP_051419407.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_051419407.1;transl_table=11 NZ_CP006568.1 RefSeq gene 526427 527315 . + . ID=gene555;Name=SOPEG_RS02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02735;pseudo=true NZ_CP006568.1 Protein Homology CDS 526427 527315 . + 0 ID=cds549;Parent=gene555;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 527312 528034 . + . ID=gene556;Name=SOPEG_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02740 NZ_CP006568.1 Protein Homology CDS 527312 528034 . + 0 ID=cds550;Parent=gene556;Dbxref=Genbank:WP_025244212.1;Name=WP_025244212.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_025244212.1;transl_table=11 NZ_CP006568.1 RefSeq gene 528290 528517 . + . ID=gene557;Name=SOPEG_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02750 NZ_CP006568.1 Protein Homology CDS 528290 528517 . + 0 ID=cds551;Parent=gene557;Dbxref=Genbank:WP_025244214.1;Name=WP_025244214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244214.1;transl_table=11 NZ_CP006568.1 RefSeq gene 528645 530777 . + . ID=gene558;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=SOPEG_RS02755;old_locus_tag=SOPEG_0537 NZ_CP006568.1 Protein Homology CDS 528645 530777 . + 0 ID=cds552;Parent=gene558;Dbxref=Genbank:WP_038468113.1;Name=WP_038468113.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_038468113.1;transl_table=11 NZ_CP006568.1 RefSeq gene 530874 531497 . + . ID=gene559;Name=SOPEG_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02760;old_locus_tag=SOPEG_0538 NZ_CP006568.1 Protein Homology CDS 530874 531497 . + 0 ID=cds553;Parent=gene559;Dbxref=Genbank:WP_038468116.1;Name=WP_038468116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468116.1;transl_table=11 NZ_CP006568.1 RefSeq gene 531530 532500 . + . ID=gene560;Name=SOPEG_RS02765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02765;pseudo=true NZ_CP006568.1 Protein Homology CDS 531530 532500 . + 0 ID=cds554;Parent=gene560;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl transferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 532535 534394 . + . ID=gene561;Name=SOPEG_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02770;old_locus_tag=SOPEG_0540 NZ_CP006568.1 Protein Homology CDS 532535 534394 . + 0 ID=cds555;Parent=gene561;Dbxref=Genbank:WP_025244215.1;Name=WP_025244215.1;gbkey=CDS;product=peptidase M3;protein_id=WP_025244215.1;transl_table=11 NZ_CP006568.1 RefSeq gene 534385 534759 . - . ID=gene562;Name=SOPEG_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02775 NZ_CP006568.1 GeneMarkS+ CDS 534385 534759 . - 0 ID=cds556;Parent=gene562;Dbxref=Genbank:WP_025244216.1;Name=WP_025244216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244216.1;transl_table=11 NZ_CP006568.1 RefSeq gene 534797 535078 . - . ID=gene563;Name=SOPEG_RS02780;end_range=535078,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02780;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 534797 535078 . - 0 ID=cds557;Parent=gene563;end_range=535078,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=Asp/Glu/hydantoin racemase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 535085 538707 . + . ID=id74;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 535242 536423 . + . ID=gene564;Name=SOPEG_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02785 NZ_CP006568.1 Protein Homology CDS 535242 536423 . + 0 ID=cds558;Parent=gene564;Dbxref=Genbank:WP_051419409.1;Name=WP_051419409.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419409.1;transl_table=11 NZ_CP006568.1 RefSeq gene 536485 536760 . + . ID=gene565;Name=SOPEG_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22470 NZ_CP006568.1 Protein Homology CDS 536485 536760 . + 0 ID=cds559;Parent=gene565;Dbxref=Genbank:WP_051419411.1;Name=WP_051419411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419411.1;transl_table=11 NZ_CP006568.1 RefSeq gene 536772 537368 . + . ID=gene566;Name=SOPEG_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02790 NZ_CP006568.1 Protein Homology CDS 536772 537368 . + 0 ID=cds560;Parent=gene566;Dbxref=Genbank:WP_025244218.1;Name=WP_025244218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244218.1;transl_table=11 NZ_CP006568.1 RefSeq gene 537416 538339 . + . ID=gene567;Name=SOPEG_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02795;old_locus_tag=SOPEG_0544 NZ_CP006568.1 Protein Homology CDS 537416 538339 . + 0 ID=cds561;Parent=gene567;Dbxref=Genbank:WP_025243983.1;Name=WP_025243983.1;gbkey=CDS;product=transposase;protein_id=WP_025243983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 538709 539062 . - . ID=gene568;Name=SOPEG_RS02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02800;partial=true;pseudo=true;start_range=.,538709 NZ_CP006568.1 Protein Homology CDS 538709 539062 . - 0 ID=cds562;Parent=gene568;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=Asp/Glu/hydantoin racemase;pseudo=true;start_range=.,538709;transl_table=11 NZ_CP006568.1 RefSeq gene 539085 539282 . - . ID=gene569;Name=SOPEG_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02805 NZ_CP006568.1 GeneMarkS+ CDS 539085 539282 . - 0 ID=cds563;Parent=gene569;Dbxref=Genbank:WP_025244220.1;Name=WP_025244220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244220.1;transl_table=11 NZ_CP006568.1 RefSeq gene 539300 539566 . - . ID=gene570;Name=SOPEG_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02810;old_locus_tag=SOPEG_0545 NZ_CP006568.1 Protein Homology CDS 539300 539566 . - 0 ID=cds564;Parent=gene570;Dbxref=Genbank:WP_025244221.1;Name=WP_025244221.1;gbkey=CDS;product=zinc-finger containing protein;protein_id=WP_025244221.1;transl_table=11 NZ_CP006568.1 RefSeq gene 539691 540194 . - . ID=gene571;Name=SOPEG_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02815;old_locus_tag=SOPEG_0546 NZ_CP006568.1 Protein Homology CDS 539691 540194 . - 0 ID=cds565;Parent=gene571;Dbxref=Genbank:WP_025244222.1;Name=WP_025244222.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_025244222.1;transl_table=11 NZ_CP006568.1 RefSeq gene 541811 542329 . + . ID=gene572;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=SOPEG_RS02820;old_locus_tag=SOPEG_0547 NZ_CP006568.1 Protein Homology CDS 541811 542329 . + 0 ID=cds566;Parent=gene572;Dbxref=Genbank:WP_025244223.1;Name=WP_025244223.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=membrane protein;protein_id=WP_025244223.1;transl_table=11 NZ_CP006568.1 RefSeq gene 542922 544517 . + . ID=gene573;Name=SOPEG_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02825;old_locus_tag=SOPEG_0548 NZ_CP006568.1 Protein Homology CDS 542922 544517 . + 0 ID=cds567;Parent=gene573;Dbxref=Genbank:WP_025244224.1;Name=WP_025244224.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_025244224.1;transl_table=11 NZ_CP006568.1 RefSeq gene 544615 545653 . + . ID=gene574;Name=SOPEG_RS02830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02830;pseudo=true NZ_CP006568.1 Protein Homology CDS 544615 545653 . + 0 ID=cds568;Parent=gene574;exception=annotated by transcript or proteomic data;gbkey=CDS;product=23S rRNA methyltransferase;pseudo=true;transl_except=(pos:545069..545071%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 545668 546273 . - . ID=gene575;Name=SOPEG_RS02835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02835;pseudo=true NZ_CP006568.1 Protein Homology CDS 545668 546273 . - 0 ID=cds569;Parent=gene575;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;pseudo=true;transl_except=(pos:complement(545809..545811)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 546283 547517 . - . ID=gene576;Name=SOPEG_RS02840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02840;pseudo=true NZ_CP006568.1 Protein Homology CDS 546283 547517 . - 0 ID=cds570;Parent=gene576;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;exception=annotated by transcript or proteomic data;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 547868 548824 . + . ID=gene577;Name=SOPEG_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02845;old_locus_tag=SOPEG_0552 NZ_CP006568.1 Protein Homology CDS 547868 548824 . + 0 ID=cds571;Parent=gene577;Dbxref=Genbank:WP_025244225.1;Name=WP_025244225.1;gbkey=CDS;product=isoaspartyl peptidase;protein_id=WP_025244225.1;transl_table=11 NZ_CP006568.1 RefSeq gene 548824 550759 . + . ID=gene578;Name=SOPEG_RS02850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02850;pseudo=true NZ_CP006568.1 Protein Homology CDS 548824 550759 . + 0 ID=cds572;Parent=gene578;Note=with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:549505..549507%2Caa:Other),(pos:549763..549765%2Caa:Other),(pos:549775..549777%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 550790 552332 . + . ID=gene579;Name=SOPEG_RS02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02855;pseudo=true NZ_CP006568.1 Protein Homology CDS 550790 552332 . + 0 ID=cds573;Parent=gene579;Note=with GsiACD is involved in the transport of glutathione into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutathione ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 552344 553264 . + . ID=gene580;Name=SOPEG_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02860;old_locus_tag=SOPEG_0555 NZ_CP006568.1 Protein Homology CDS 552344 553264 . + 0 ID=cds574;Parent=gene580;Dbxref=Genbank:WP_025244226.1;Name=WP_025244226.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;product=glutathione ABC transporter permease;protein_id=WP_025244226.1;transl_table=11 NZ_CP006568.1 RefSeq gene 553274 553906 . + . ID=gene581;Name=SOPEG_RS02865;end_range=553906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02865;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 553274 553906 . + 0 ID=cds575;Parent=gene581;Note=with GsiABD is involved in the transport of glutathione into the cell;end_range=553906,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutathione ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 553897 556501 . + . ID=id75;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 554019 554768 . - . ID=gene582;Name=SOPEG_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02870;old_locus_tag=SOPEG_0557 NZ_CP006568.1 Protein Homology CDS 554019 554768 . - 0 ID=cds576;Parent=gene582;Dbxref=Genbank:WP_025244228.1;Name=WP_025244228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244228.1;transl_table=11 NZ_CP006568.1 RefSeq gene 554780 555514 . - . ID=gene583;Name=SOPEG_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02875 NZ_CP006568.1 Protein Homology CDS 554780 555514 . - 0 ID=cds577;Parent=gene583;Dbxref=Genbank:WP_051419413.1;Name=WP_051419413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419413.1;transl_table=11 NZ_CP006568.1 RefSeq gene 555526 556302 . - . ID=gene584;Name=SOPEG_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02880 NZ_CP006568.1 Protein Homology CDS 555526 556302 . - 0 ID=cds578;Parent=gene584;Dbxref=Genbank:WP_038468124.1;Name=WP_038468124.1;gbkey=CDS;product=transposase;protein_id=WP_038468124.1;transl_table=11 NZ_CP006568.1 RefSeq gene 556458 556688 . + . ID=gene585;Name=SOPEG_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02885 NZ_CP006568.1 Protein Homology CDS 556458 556688 . + 0 ID=cds579;Parent=gene585;Dbxref=Genbank:WP_025244229.1;Name=WP_025244229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244229.1;transl_table=11 NZ_CP006568.1 RefSeq gene 556734 557564 . - . ID=gene586;Name=SOPEG_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02890;old_locus_tag=SOPEG_0559 NZ_CP006568.1 Protein Homology CDS 556734 557564 . - 0 ID=cds580;Parent=gene586;Dbxref=Genbank:WP_025244230.1;Name=WP_025244230.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244230.1;transl_table=11 NZ_CP006568.1 RefSeq gene 557790 558926 . + . ID=gene587;Name=SOPEG_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02895;old_locus_tag=SOPEG_0560 NZ_CP006568.1 Protein Homology CDS 557790 558926 . + 0 ID=cds581;Parent=gene587;Dbxref=Genbank:WP_025244231.1;Name=WP_025244231.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_025244231.1;transl_table=11 NZ_CP006568.1 RefSeq gene 558941 559270 . - . ID=gene588;Name=SOPEG_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02900 NZ_CP006568.1 Protein Homology CDS 558941 559270 . - 0 ID=cds582;Parent=gene588;Dbxref=Genbank:WP_025244232.1;Name=WP_025244232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244232.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 559256 560574 . + . ID=id76;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 559315 560226 . - . ID=gene589;Name=SOPEG_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02905 NZ_CP006568.1 Protein Homology CDS 559315 560226 . - 0 ID=cds583;Parent=gene589;Dbxref=Genbank:WP_025244233.1;Name=WP_025244233.1;gbkey=CDS;product=transposase;protein_id=WP_025244233.1;transl_table=11 NZ_CP006568.1 RefSeq gene 560223 560501 . - . ID=gene590;Name=SOPEG_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02910 NZ_CP006568.1 Protein Homology CDS 560223 560501 . - 0 ID=cds584;Parent=gene590;Dbxref=Genbank:WP_025244234.1;Name=WP_025244234.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244234.1;transl_table=11 NZ_CP006568.1 RefSeq gene 560562 560759 . - . ID=gene591;Name=SOPEG_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22475 NZ_CP006568.1 Protein Homology CDS 560562 560759 . - 0 ID=cds585;Parent=gene591;Dbxref=Genbank:WP_025244235.1;Name=WP_025244235.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244235.1;transl_table=11 NZ_CP006568.1 RefSeq gene 560908 561102 . + . ID=gene592;Name=SOPEG_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02920 NZ_CP006568.1 GeneMarkS+ CDS 560908 561102 . + 0 ID=cds586;Parent=gene592;Dbxref=Genbank:WP_038468128.1;Name=WP_038468128.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468128.1;transl_table=11 NZ_CP006568.1 RefSeq gene 561422 562615 . + . ID=gene593;Name=SOPEG_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02925;old_locus_tag=SOPEG_0563 NZ_CP006568.1 Protein Homology CDS 561422 562615 . + 0 ID=cds587;Parent=gene593;Dbxref=Genbank:WP_025244236.1;Name=WP_025244236.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_025244236.1;transl_table=11 NZ_CP006568.1 RefSeq gene 562754 564037 . - . ID=gene594;Name=SOPEG_RS02930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02930;pseudo=true NZ_CP006568.1 Protein Homology CDS 562754 564037 . - 0 ID=cds588;Parent=gene594;gbkey=CDS;product=serine/threonine protein kinase;pseudo=true;transl_except=(pos:complement(563477..563479)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 565096 566157 . + . ID=id77;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 565156 565296 . - . ID=gene595;Name=SOPEG_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02935 NZ_CP006568.1 Protein Homology CDS 565156 565296 . - 0 ID=cds589;Parent=gene595;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 565318 566079 . - . ID=gene596;Name=SOPEG_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02940 NZ_CP006568.1 Protein Homology CDS 565318 566079 . - 0 ID=cds590;Parent=gene596;Dbxref=Genbank:WP_025244237.1;Name=WP_025244237.1;gbkey=CDS;product=transposase;protein_id=WP_025244237.1;transl_table=11 NZ_CP006568.1 RefSeq gene 566819 567007 . + . ID=gene597;Name=SOPEG_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02945 NZ_CP006568.1 Protein Homology CDS 566819 567007 . + 0 ID=cds591;Parent=gene597;Dbxref=Genbank:WP_025244238.1;Name=WP_025244238.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244238.1;transl_table=11 NZ_CP006568.1 RefSeq gene 567072 567327 . - . ID=gene598;Name=SOPEG_RS02950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02950;pseudo=true NZ_CP006568.1 Protein Homology CDS 567072 567327 . - 0 ID=cds592;Parent=gene598;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutaredoxin;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 567612 568495 . + . ID=gene599;Name=SOPEG_RS02955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS02955;pseudo=true NZ_CP006568.1 Protein Homology CDS 567612 568495 . + 0 ID=cds593;Parent=gene599;Note=responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribosomal protein S6 modification protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 568740 569219 . + . ID=gene600;Name=SOPEG_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02960;old_locus_tag=SOPEG_0569 NZ_CP006568.1 Protein Homology CDS 568740 569219 . + 0 ID=cds594;Parent=gene600;Dbxref=Genbank:WP_025244239.1;Name=WP_025244239.1;gbkey=CDS;product=sensory transduction regulator;protein_id=WP_025244239.1;transl_table=11 NZ_CP006568.1 RefSeq gene 569681 570790 . + . ID=gene601;Name=SOPEG_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02965;old_locus_tag=SOPEG_0570 NZ_CP006568.1 Protein Homology CDS 569681 570790 . + 0 ID=cds595;Parent=gene601;Dbxref=Genbank:WP_025244240.1;Name=WP_025244240.1;gbkey=CDS;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=WP_025244240.1;transl_table=11 NZ_CP006568.1 RefSeq gene 570911 572053 . + . ID=gene602;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=SOPEG_RS02970;old_locus_tag=SOPEG_0571 NZ_CP006568.1 Protein Homology CDS 570911 572053 . + 0 ID=cds596;Parent=gene602;Dbxref=Genbank:WP_038468131.1;Name=WP_038468131.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine transporter ATP-binding subunit;protein_id=WP_038468131.1;transl_table=11 NZ_CP006568.1 RefSeq gene 572113 573027 . + . ID=gene603;Name=SOPEG_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02975;old_locus_tag=SOPEG_0572 NZ_CP006568.1 Protein Homology CDS 572113 573027 . + 0 ID=cds597;Parent=gene603;Dbxref=Genbank:WP_051419989.1;Name=WP_051419989.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_051419989.1;transl_table=11 NZ_CP006568.1 RefSeq gene 573024 573869 . + . ID=gene604;Name=SOPEG_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS02980;old_locus_tag=SOPEG_0573 NZ_CP006568.1 Protein Homology CDS 573024 573869 . + 0 ID=cds598;Parent=gene604;Dbxref=Genbank:WP_025244243.1;Name=WP_025244243.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_025244243.1;transl_table=11 NZ_CP006568.1 RefSeq gene 573994 574239 . + . ID=gene605;Name=SOPEG_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22480 NZ_CP006568.1 Protein Homology CDS 573994 574239 . + 0 ID=cds599;Parent=gene605;Dbxref=Genbank:WP_051419416.1;Name=WP_051419416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419416.1;transl_table=11 NZ_CP006568.1 RefSeq gene 574212 574436 . + . ID=gene606;Name=SOPEG_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22485 NZ_CP006568.1 Protein Homology CDS 574212 574436 . + 0 ID=cds600;Parent=gene606;Dbxref=Genbank:WP_051419418.1;Name=WP_051419418.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419418.1;transl_table=11 NZ_CP006568.1 RefSeq gene 574499 575522 . + . ID=gene607;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=SOPEG_RS02990;pseudo=true NZ_CP006568.1 Protein Homology CDS 574499 575522 . + 0 ID=cds601;Parent=gene607;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rumB;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 575544 575993 . - . ID=gene608;Name=artM;end_range=575993,.;gbkey=Gene;gene=artM;gene_biotype=pseudogene;locus_tag=SOPEG_RS02995;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 575544 575993 . - 0 ID=cds602;Parent=gene608;Note=with ArtPQJI acts to transport arginine across the inner membrane;end_range=575993,.;exception=unextendable partial coding region;gbkey=CDS;gene=artM;partial=true;product=arginine transporter permease subunit ArtM;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 575950 576156 . + . ID=gene609;Name=SOPEG_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03000 NZ_CP006568.1 GeneMarkS+ CDS 575950 576156 . + 0 ID=cds603;Parent=gene609;Dbxref=Genbank:WP_025244245.1;Name=WP_025244245.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244245.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 576212 576461 . + . ID=id78;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 576491 577809 . + . ID=id79;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 576528 577736 . - . ID=gene610;Name=SOPEG_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03005;old_locus_tag=SOPEG_0577 NZ_CP006568.1 Protein Homology CDS 576528 577736 . - 0 ID=cds604;Parent=gene610;Dbxref=Genbank:WP_025244246.1;Name=WP_025244246.1;gbkey=CDS;product=transposase;protein_id=WP_025244246.1;transl_table=11 NZ_CP006568.1 RefSeq gene 577797 578600 . - . ID=gene611;Name=SOPEG_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22490;old_locus_tag=SOPEG_ps0578 NZ_CP006568.1 Protein Homology CDS 577797 578600 . - 0 ID=cds605;Parent=gene611;Dbxref=Genbank:WP_025244247.1;Name=WP_025244247.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244247.1;transl_table=11 NZ_CP006568.1 RefSeq gene 578639 579277 . - . ID=gene612;Name=SOPEG_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03015;old_locus_tag=SOPEG_0579 NZ_CP006568.1 Protein Homology CDS 578639 579277 . - 0 ID=cds606;Parent=gene612;Dbxref=Genbank:WP_025244248.1;Name=WP_025244248.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244248.1;transl_table=11 NZ_CP006568.1 RefSeq gene 579274 580518 . - . ID=gene613;Name=SOPEG_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03020;old_locus_tag=SOPEG_0580 NZ_CP006568.1 Protein Homology CDS 579274 580518 . - 0 ID=cds607;Parent=gene613;Dbxref=Genbank:WP_025244249.1;Name=WP_025244249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244249.1;transl_table=11 NZ_CP006568.1 RefSeq gene 580515 580871 . - . ID=gene614;Name=SOPEG_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03025;old_locus_tag=SOPEG_0581 NZ_CP006568.1 Protein Homology CDS 580515 580871 . - 0 ID=cds608;Parent=gene614;Dbxref=Genbank:WP_025244250.1;Name=WP_025244250.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244250.1;transl_table=11 NZ_CP006568.1 RefSeq gene 580881 581555 . - . ID=gene615;Name=SOPEG_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03030;old_locus_tag=SOPEG_0582 NZ_CP006568.1 Protein Homology CDS 580881 581555 . - 0 ID=cds609;Parent=gene615;Dbxref=Genbank:WP_038468135.1;Name=WP_038468135.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_038468135.1;transl_table=11 NZ_CP006568.1 RefSeq gene 581557 582402 . - . ID=gene616;Name=SOPEG_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03035;old_locus_tag=SOPEG_0583 NZ_CP006568.1 Protein Homology CDS 581557 582402 . - 0 ID=cds610;Parent=gene616;Dbxref=Genbank:WP_025244252.1;Name=WP_025244252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244252.1;transl_table=11 NZ_CP006568.1 RefSeq gene 582399 582700 . - . ID=gene617;Name=SOPEG_RS03040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03040;pseudo=true NZ_CP006568.1 Protein Homology CDS 582399 582700 . - 0 ID=cds611;Parent=gene617;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 582700 583494 . - . ID=gene618;Name=SOPEG_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03045;old_locus_tag=SOPEG_0584 NZ_CP006568.1 Protein Homology CDS 582700 583494 . - 0 ID=cds612;Parent=gene618;Dbxref=Genbank:WP_025244253.1;Name=WP_025244253.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244253.1;transl_table=11 NZ_CP006568.1 RefSeq gene 583491 585338 . - . ID=gene619;Name=SOPEG_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03050 NZ_CP006568.1 Protein Homology CDS 583491 585338 . - 0 ID=cds613;Parent=gene619;Dbxref=Genbank:WP_025244254.1;Name=WP_025244254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244254.1;transl_table=11 NZ_CP006568.1 RefSeq gene 585338 585505 . - . ID=gene620;Name=SOPEG_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03055 NZ_CP006568.1 Protein Homology CDS 585338 585505 . - 0 ID=cds614;Parent=gene620;Dbxref=Genbank:WP_025244255.1;Name=WP_025244255.1;gbkey=CDS;product=GreA protein;protein_id=WP_025244255.1;transl_table=11 NZ_CP006568.1 RefSeq gene 585547 585951 . - . ID=gene621;Name=SOPEG_RS03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03060;pseudo=true NZ_CP006568.1 Protein Homology CDS 585547 585951 . - 0 ID=cds615;Parent=gene621;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(585850..585852)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 585951 586391 . - . ID=gene622;Name=SOPEG_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03065;old_locus_tag=SOPEG_0588 NZ_CP006568.1 Protein Homology CDS 585951 586391 . - 0 ID=cds616;Parent=gene622;Dbxref=Genbank:WP_025244256.1;Name=WP_025244256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244256.1;transl_table=11 NZ_CP006568.1 RefSeq gene 586391 587874 . - . ID=gene623;Name=SOPEG_RS03070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03070;pseudo=true NZ_CP006568.1 Protein Homology CDS 586391 587874 . - 0 ID=cds617;Parent=gene623;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(586841..586843)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 587855 588406 . - . ID=gene624;Name=SOPEG_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03075;old_locus_tag=SOPEG_0589 NZ_CP006568.1 Protein Homology CDS 587855 588406 . - 0 ID=cds618;Parent=gene624;Dbxref=Genbank:WP_025244257.1;Name=WP_025244257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244257.1;transl_table=11 NZ_CP006568.1 RefSeq gene 588391 588756 . - . ID=gene625;Name=SOPEG_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03080;old_locus_tag=SOPEG_0590 NZ_CP006568.1 Protein Homology CDS 588391 588756 . - 0 ID=cds619;Parent=gene625;Dbxref=Genbank:WP_025244258.1;Name=WP_025244258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244258.1;transl_table=11 NZ_CP006568.1 RefSeq gene 588701 589330 . - . ID=gene626;Name=SOPEG_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03085;old_locus_tag=SOPEG_0591 NZ_CP006568.1 Protein Homology CDS 588701 589330 . - 0 ID=cds620;Parent=gene626;Dbxref=Genbank:WP_025244259.1;Name=WP_025244259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244259.1;transl_table=11 NZ_CP006568.1 RefSeq gene 589332 589613 . - . ID=gene627;Name=SOPEG_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03090 NZ_CP006568.1 Protein Homology CDS 589332 589613 . - 0 ID=cds621;Parent=gene627;Dbxref=Genbank:WP_025244260.1;Name=WP_025244260.1;gbkey=CDS;product=30S ribosomal protein S16;protein_id=WP_025244260.1;transl_table=11 NZ_CP006568.1 RefSeq gene 589635 590006 . - . ID=gene628;Name=SOPEG_RS03095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03095;pseudo=true NZ_CP006568.1 Protein Homology CDS 589635 590006 . - 0 ID=cds622;Parent=gene628;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(589719..589721)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 590057 590401 . - . ID=gene629;Name=SOPEG_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03100;old_locus_tag=SOPEG_0594 NZ_CP006568.1 Protein Homology CDS 590057 590401 . - 0 ID=cds623;Parent=gene629;Dbxref=Genbank:WP_025244261.1;Name=WP_025244261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244261.1;transl_table=11 NZ_CP006568.1 RefSeq gene 590420 591442 . - . ID=gene630;Name=SOPEG_RS03105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03105;pseudo=true NZ_CP006568.1 Protein Homology CDS 590420 591442 . - 0 ID=cds624;Parent=gene630;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 591439 591921 . - . ID=gene631;Name=SOPEG_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03110;old_locus_tag=SOPEG_0596 NZ_CP006568.1 Protein Homology CDS 591439 591921 . - 0 ID=cds625;Parent=gene631;Dbxref=Genbank:WP_025244262.1;Name=WP_025244262.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244262.1;transl_table=11 NZ_CP006568.1 RefSeq gene 591923 593227 . - . ID=gene632;Name=SOPEG_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03115;old_locus_tag=SOPEG_0597 NZ_CP006568.1 Protein Homology CDS 591923 593227 . - 0 ID=cds626;Parent=gene632;Dbxref=Genbank:WP_025244263.1;Name=WP_025244263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244263.1;transl_table=11 NZ_CP006568.1 RefSeq gene 593231 593914 . - . ID=gene633;Name=SOPEG_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03120;old_locus_tag=SOPEG_0598 NZ_CP006568.1 Protein Homology CDS 593231 593914 . - 0 ID=cds627;Parent=gene633;Dbxref=Genbank:WP_025244264.1;Name=WP_025244264.1;gbkey=CDS;product=head morphogenesis protein;protein_id=WP_025244264.1;transl_table=11 NZ_CP006568.1 RefSeq gene 593955 595424 . - . ID=gene634;Name=SOPEG_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03125;old_locus_tag=SOPEG_0599 NZ_CP006568.1 Protein Homology CDS 593955 595424 . - 0 ID=cds628;Parent=gene634;Dbxref=Genbank:WP_051419420.1;Name=WP_051419420.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419420.1;transl_table=11 NZ_CP006568.1 RefSeq gene 595466 596713 . - . ID=gene635;Name=SOPEG_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03130;old_locus_tag=SOPEG_0600 NZ_CP006568.1 Protein Homology CDS 595466 596713 . - 0 ID=cds629;Parent=gene635;Dbxref=Genbank:WP_051419990.1;Name=WP_051419990.1;gbkey=CDS;product=terminase;protein_id=WP_051419990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 596715 597239 . - . ID=gene636;Name=SOPEG_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03135;old_locus_tag=SOPEG_0601 NZ_CP006568.1 Protein Homology CDS 596715 597239 . - 0 ID=cds630;Parent=gene636;Dbxref=Genbank:WP_038469498.1;Name=WP_038469498.1;gbkey=CDS;product=terminase;protein_id=WP_038469498.1;transl_table=11 NZ_CP006568.1 RefSeq gene 597296 597496 . - . ID=gene637;Name=SOPEG_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03140 NZ_CP006568.1 GeneMarkS+ CDS 597296 597496 . - 0 ID=cds631;Parent=gene637;Dbxref=Genbank:WP_025244267.1;Name=WP_025244267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244267.1;transl_table=11 NZ_CP006568.1 RefSeq gene 597598 597786 . - . ID=gene638;Name=SOPEG_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03145 NZ_CP006568.1 GeneMarkS+ CDS 597598 597786 . - 0 ID=cds632;Parent=gene638;Dbxref=Genbank:WP_025244268.1;Name=WP_025244268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244268.1;transl_table=11 NZ_CP006568.1 RefSeq gene 597955 598341 . - . ID=gene639;Name=SOPEG_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03155;old_locus_tag=SOPEG_0602 NZ_CP006568.1 Protein Homology CDS 597955 598341 . - 0 ID=cds633;Parent=gene639;Dbxref=Genbank:WP_025244269.1;Name=WP_025244269.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244269.1;transl_table=11 NZ_CP006568.1 RefSeq gene 598348 598878 . - . ID=gene640;Name=SOPEG_RS03160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03160;pseudo=true NZ_CP006568.1 Protein Homology CDS 598348 598878 . - 0 ID=cds634;Parent=gene640;gbkey=CDS;product=lysozyme;pseudo=true;transl_except=(pos:complement(598495..598497)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 598868 599059 . - . ID=gene641;Name=SOPEG_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03165;old_locus_tag=SOPEG_0604 NZ_CP006568.1 Protein Homology CDS 598868 599059 . - 0 ID=cds635;Parent=gene641;Dbxref=Genbank:WP_025244270.1;Name=WP_025244270.1;gbkey=CDS;product=holin;protein_id=WP_025244270.1;transl_table=11 NZ_CP006568.1 RefSeq gene 599132 599779 . - . ID=gene642;Name=SOPEG_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03170;old_locus_tag=SOPEG_0605 NZ_CP006568.1 Protein Homology CDS 599132 599779 . - 0 ID=cds636;Parent=gene642;Dbxref=Genbank:WP_025244271.1;Name=WP_025244271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244271.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 599970 601292 . + . ID=id80;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 600046 601254 . + . ID=gene643;Name=SOPEG_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03175;old_locus_tag=SOPEG_0606 NZ_CP006568.1 Protein Homology CDS 600046 601254 . + 0 ID=cds637;Parent=gene643;Dbxref=Genbank:WP_025244272.1;Name=WP_025244272.1;gbkey=CDS;product=transposase;protein_id=WP_025244272.1;transl_table=11 NZ_CP006568.1 RefSeq gene 601288 601362 . - . ID=gene644;Name=SOPEG_RS03180;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03180;old_locus_tag=SOPEG_t0607 NZ_CP006568.1 tRNAscan-SE tRNA 601288 601362 . - . ID=rna6;Parent=gene644;gbkey=tRNA;product=tRNA-OTHER NZ_CP006568.1 tRNAscan-SE exon 601288 601362 . - . ID=id81;Parent=rna6;gbkey=tRNA;product=tRNA-OTHER NZ_CP006568.1 RefSeq gene 601480 601848 . - . ID=gene645;Name=SOPEG_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03185;old_locus_tag=SOPEG_0608 NZ_CP006568.1 Protein Homology CDS 601480 601848 . - 0 ID=cds638;Parent=gene645;Dbxref=Genbank:WP_025244273.1;Name=WP_025244273.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244273.1;transl_table=11 NZ_CP006568.1 RefSeq gene 602176 602937 . + . ID=gene646;Name=SOPEG_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03190;old_locus_tag=SOPEG_0609 NZ_CP006568.1 Protein Homology CDS 602176 602937 . + 0 ID=cds639;Parent=gene646;Dbxref=Genbank:WP_025244274.1;Name=WP_025244274.1;gbkey=CDS;product=antirepressor;protein_id=WP_025244274.1;transl_table=11 NZ_CP006568.1 RefSeq gene 603006 603308 . + . ID=gene647;Name=SOPEG_RS03195;end_range=603308,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03195;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 603006 603308 . + 0 ID=cds640;Parent=gene647;end_range=603308,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 603788 604417 . + . ID=gene648;Name=SOPEG_RS03205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03205;pseudo=true NZ_CP006568.1 Protein Homology CDS 603788 604417 . + 0 ID=cds641;Parent=gene648;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 604519 605583 . + . ID=id82;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 604599 605144 . + . ID=gene649;Name=SOPEG_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03210 NZ_CP006568.1 Protein Homology CDS 604599 605144 . + 0 ID=cds642;Parent=gene649;Dbxref=Genbank:WP_038468141.1;Name=WP_038468141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468141.1;transl_table=11 NZ_CP006568.1 RefSeq gene 605382 605522 . + . ID=gene650;Name=SOPEG_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03215 NZ_CP006568.1 Protein Homology CDS 605382 605522 . + 0 ID=cds643;Parent=gene650;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 605664 605846 . - . ID=gene651;Name=SOPEG_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03220 NZ_CP006568.1 GeneMarkS+ CDS 605664 605846 . - 0 ID=cds644;Parent=gene651;Dbxref=Genbank:WP_025244276.1;Name=WP_025244276.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244276.1;transl_table=11 NZ_CP006568.1 RefSeq gene 605866 606102 . + . ID=gene652;Name=SOPEG_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03225 NZ_CP006568.1 GeneMarkS+ CDS 605866 606102 . + 0 ID=cds645;Parent=gene652;Dbxref=Genbank:WP_038468144.1;Name=WP_038468144.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468144.1;transl_table=11 NZ_CP006568.1 RefSeq gene 606095 606403 . + . ID=gene653;Name=SOPEG_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03230 NZ_CP006568.1 GeneMarkS+ CDS 606095 606403 . + 0 ID=cds646;Parent=gene653;Dbxref=Genbank:WP_025244278.1;Name=WP_025244278.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244278.1;transl_table=11 NZ_CP006568.1 RefSeq gene 606730 607224 . + . ID=gene654;Name=SOPEG_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03235 NZ_CP006568.1 Protein Homology CDS 606730 607224 . + 0 ID=cds647;Parent=gene654;Dbxref=Genbank:WP_025244280.1;Name=WP_025244280.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244280.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 607203 608266 . + . ID=id83;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 607266 608189 . - . ID=gene655;Name=SOPEG_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03240;old_locus_tag=SOPEG_0614 NZ_CP006568.1 Protein Homology CDS 607266 608189 . - 0 ID=cds648;Parent=gene655;Dbxref=Genbank:WP_025244281.1;Name=WP_025244281.1;gbkey=CDS;product=transposase;protein_id=WP_025244281.1;transl_table=11 NZ_CP006568.1 RefSeq gene 608268 608816 . + . ID=gene656;Name=SOPEG_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03245 NZ_CP006568.1 Protein Homology CDS 608268 608816 . + 0 ID=cds649;Parent=gene656;Dbxref=Genbank:WP_025244282.1;Name=WP_025244282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244282.1;transl_table=11 NZ_CP006568.1 RefSeq gene 609039 609407 . + . ID=gene657;Name=SOPEG_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03250;old_locus_tag=SOPEG_0616 NZ_CP006568.1 Protein Homology CDS 609039 609407 . + 0 ID=cds650;Parent=gene657;Dbxref=Genbank:WP_025244283.1;Name=WP_025244283.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_025244283.1;transl_table=11 NZ_CP006568.1 RefSeq gene 609438 610017 . + . ID=gene658;Name=SOPEG_RS03255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03255;pseudo=true NZ_CP006568.1 Protein Homology CDS 609438 610017 . + 0 ID=cds651;Parent=gene658;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adenylate kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 610377 611312 . - . ID=gene659;Name=SOPEG_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03260;old_locus_tag=SOPEG_0618 NZ_CP006568.1 Protein Homology CDS 610377 611312 . - 0 ID=cds652;Parent=gene659;Dbxref=Genbank:WP_025244284.1;Name=WP_025244284.1;gbkey=CDS;product=bile acid:sodium symporter;protein_id=WP_025244284.1;transl_table=11 NZ_CP006568.1 RefSeq gene 611913 612504 . - . ID=gene660;Name=SOPEG_RS03265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03265;pseudo=true NZ_CP006568.1 Protein Homology CDS 611913 612504 . - 0 ID=cds653;Parent=gene660;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sulfate ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 612538 613443 . - . ID=gene661;Name=SOPEG_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03270 NZ_CP006568.1 Protein Homology CDS 612538 613443 . - 0 ID=cds654;Parent=gene661;Dbxref=Genbank:WP_038468147.1;Name=WP_038468147.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_038468147.1;transl_table=11 NZ_CP006568.1 RefSeq gene 613999 614259 . + . ID=gene662;Name=SOPEG_RS03275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03275;pseudo=true NZ_CP006568.1 Protein Homology CDS 613999 614259 . + 0 ID=cds655;Parent=gene662;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:614128..614130%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 614545 616233 . - . ID=gene663;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=SOPEG_RS03280;old_locus_tag=SOPEG_0622 NZ_CP006568.1 Protein Homology CDS 614545 616233 . - 0 ID=cds656;Parent=gene663;Dbxref=Genbank:WP_051419991.1;Name=WP_051419991.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=WP_051419991.1;transl_table=11 NZ_CP006568.1 RefSeq gene 616338 617284 . - . ID=gene664;Name=SOPEG_RS03285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03285;pseudo=true NZ_CP006568.1 Protein Homology CDS 616338 617284 . - 0 ID=cds657;Parent=gene664;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 618033 618527 . - . ID=gene665;Name=SOPEG_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03290;old_locus_tag=SOPEG_0624 NZ_CP006568.1 Protein Homology CDS 618033 618527 . - 0 ID=cds658;Parent=gene665;Dbxref=Genbank:WP_025244286.1;Name=WP_025244286.1;gbkey=CDS;product=cupin;protein_id=WP_025244286.1;transl_table=11 NZ_CP006568.1 RefSeq gene 618572 619006 . - . ID=gene666;Name=SOPEG_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03295;old_locus_tag=SOPEG_0625 NZ_CP006568.1 Protein Homology CDS 618572 619006 . - 0 ID=cds659;Parent=gene666;Dbxref=Genbank:WP_025244287.1;Name=WP_025244287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244287.1;transl_table=11 NZ_CP006568.1 RefSeq gene 619142 619645 . - . ID=gene667;Name=SOPEG_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03300;old_locus_tag=SOPEG_0626 NZ_CP006568.1 Protein Homology CDS 619142 619645 . - 0 ID=cds660;Parent=gene667;Dbxref=Genbank:WP_025244288.1;Name=WP_025244288.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244288.1;transl_table=11 NZ_CP006568.1 RefSeq gene 619903 620544 . + . ID=gene668;Name=SOPEG_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03305;old_locus_tag=SOPEG_0627 NZ_CP006568.1 Protein Homology CDS 619903 620544 . + 0 ID=cds661;Parent=gene668;Dbxref=Genbank:WP_025244289.1;Name=WP_025244289.1;gbkey=CDS;product=methyltransferase;protein_id=WP_025244289.1;transl_table=11 NZ_CP006568.1 RefSeq gene 620572 621288 . - . ID=gene669;Name=SOPEG_RS03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03310;pseudo=true NZ_CP006568.1 Protein Homology CDS 620572 621288 . - 0 ID=cds662;Parent=gene669;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(620755..620757)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 621285 622162 . - . ID=gene670;Name=SOPEG_RS03315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03315;pseudo=true NZ_CP006568.1 Protein Homology CDS 621285 622162 . - 0 ID=cds663;Parent=gene670;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 622159 623442 . - . ID=gene671;Name=SOPEG_RS03320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03320;pseudo=true NZ_CP006568.1 Protein Homology CDS 622159 623442 . - 0 ID=cds664;Parent=gene671;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;pseudo=true;transl_except=(pos:complement(622924..622926)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 623454 624356 . - . ID=gene672;Name=SOPEG_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03325;old_locus_tag=SOPEG_0631 NZ_CP006568.1 Protein Homology CDS 623454 624356 . - 0 ID=cds665;Parent=gene672;Dbxref=Genbank:WP_025244290.1;Name=WP_025244290.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_025244290.1;transl_table=11 NZ_CP006568.1 RefSeq gene 624463 625588 . - . ID=gene673;Name=SOPEG_RS03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03330;pseudo=true NZ_CP006568.1 Protein Homology CDS 624463 625588 . - 0 ID=cds666;Parent=gene673;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_except=(pos:complement(624574..624576)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 626286 627674 . - . ID=gene674;Name=SOPEG_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03335;old_locus_tag=SOPEG_0633 NZ_CP006568.1 Protein Homology CDS 626286 627674 . - 0 ID=cds667;Parent=gene674;Dbxref=Genbank:WP_025244291.1;Name=WP_025244291.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=D-alanine/D-serine/glycine permease;protein_id=WP_025244291.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 628461 629784 . + . ID=id84;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 628537 629745 . + . ID=gene675;Name=SOPEG_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03340;old_locus_tag=SOPEG_0634 NZ_CP006568.1 Protein Homology CDS 628537 629745 . + 0 ID=cds668;Parent=gene675;Dbxref=Genbank:WP_025244292.1;Name=WP_025244292.1;gbkey=CDS;product=transposase;protein_id=WP_025244292.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 629866 632467 . + . ID=id85;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 629988 630740 . - . ID=gene676;Name=SOPEG_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03345;old_locus_tag=SOPEG_0635 NZ_CP006568.1 Protein Homology CDS 629988 630740 . - 0 ID=cds669;Parent=gene676;Dbxref=Genbank:WP_025244293.1;Name=WP_025244293.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244293.1;transl_table=11 NZ_CP006568.1 RefSeq gene 630752 632269 . - . ID=gene677;Name=SOPEG_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03350;old_locus_tag=SOPEG_0636 NZ_CP006568.1 Protein Homology CDS 630752 632269 . - 0 ID=cds670;Parent=gene677;Dbxref=Genbank:WP_051419422.1;Name=WP_051419422.1;gbkey=CDS;product=transposase;protein_id=WP_051419422.1;transl_table=11 NZ_CP006568.1 RefSeq gene 632636 633502 . - . ID=gene678;Name=SOPEG_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03355;old_locus_tag=SOPEG_0637 NZ_CP006568.1 Protein Homology CDS 632636 633502 . - 0 ID=cds671;Parent=gene678;Dbxref=Genbank:WP_025244295.1;Name=WP_025244295.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244295.1;transl_table=11 NZ_CP006568.1 RefSeq gene 634120 634476 . - . ID=gene679;Name=SOPEG_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03360 NZ_CP006568.1 GeneMarkS+ CDS 634120 634476 . - 0 ID=cds672;Parent=gene679;Dbxref=Genbank:WP_038468150.1;Name=WP_038468150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468150.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 634577 635639 . + . ID=id86;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 634655 635577 . + . ID=gene680;Name=SOPEG_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03365;pseudo=true NZ_CP006568.1 Protein Homology CDS 634655 635577 . + 0 ID=cds673;Parent=gene680;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 635703 636771 . + . ID=id87;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 635782 636162 . + . ID=gene681;Name=SOPEG_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03370 NZ_CP006568.1 Protein Homology CDS 635782 636162 . + 0 ID=cds674;Parent=gene681;Dbxref=Genbank:WP_025244297.1;Name=WP_025244297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244297.1;transl_table=11 NZ_CP006568.1 RefSeq gene 636264 636710 . + . ID=gene682;Name=SOPEG_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03375 NZ_CP006568.1 Protein Homology CDS 636264 636710 . + 0 ID=cds675;Parent=gene682;Dbxref=Genbank:WP_038468153.1;Name=WP_038468153.1;gbkey=CDS;product=transposase;protein_id=WP_038468153.1;transl_table=11 NZ_CP006568.1 RefSeq gene 637388 638125 . + . ID=gene683;Name=SOPEG_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03380;old_locus_tag=SOPEG_0641 NZ_CP006568.1 Protein Homology CDS 637388 638125 . + 0 ID=cds676;Parent=gene683;Dbxref=Genbank:WP_025244299.1;Name=WP_025244299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244299.1;transl_table=11 NZ_CP006568.1 RefSeq gene 638272 638901 . - . ID=gene684;Name=SOPEG_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03385;old_locus_tag=SOPEG_0642 NZ_CP006568.1 Protein Homology CDS 638272 638901 . - 0 ID=cds677;Parent=gene684;Dbxref=Genbank:WP_038468156.1;Name=WP_038468156.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468156.1;transl_table=11 NZ_CP006568.1 RefSeq gene 639394 639918 . + . ID=gene685;Name=SOPEG_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03390 NZ_CP006568.1 Protein Homology CDS 639394 639918 . + 0 ID=cds678;Parent=gene685;Dbxref=Genbank:WP_025244300.1;Name=WP_025244300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244300.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 639891 641212 . + . ID=id88;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 639929 641137 . - . ID=gene686;Name=SOPEG_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03395;old_locus_tag=SOPEG_0644 NZ_CP006568.1 Protein Homology CDS 639929 641137 . - 0 ID=cds679;Parent=gene686;Dbxref=Genbank:WP_025244301.1;Name=WP_025244301.1;gbkey=CDS;product=transposase;protein_id=WP_025244301.1;transl_table=11 NZ_CP006568.1 RefSeq gene 641203 641616 . + . ID=gene687;Name=SOPEG_RS03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03400;partial=true;pseudo=true;start_range=.,641203 NZ_CP006568.1 Protein Homology CDS 641203 641616 . + 0 ID=cds680;Parent=gene687;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=oxidoreductase;pseudo=true;start_range=.,641203;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 641624 644157 . + . ID=id89;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 641746 642496 . - . ID=gene688;Name=SOPEG_RS03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03405;pseudo=true NZ_CP006568.1 Protein Homology CDS 641746 642496 . - 0 ID=cds681;Parent=gene688;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 642847 644028 . - . ID=gene689;Name=SOPEG_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03410 NZ_CP006568.1 Protein Homology CDS 642847 644028 . - 0 ID=cds682;Parent=gene689;Dbxref=Genbank:WP_051419425.1;Name=WP_051419425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419425.1;transl_table=11 NZ_CP006568.1 RefSeq gene 644569 644994 . - . ID=gene690;Name=SOPEG_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03415;old_locus_tag=SOPEG_0647 NZ_CP006568.1 Protein Homology CDS 644569 644994 . - 0 ID=cds683;Parent=gene690;Dbxref=Genbank:WP_025244304.1;Name=WP_025244304.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_025244304.1;transl_table=11 NZ_CP006568.1 RefSeq gene 644998 645717 . - . ID=gene691;Name=SOPEG_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03420 NZ_CP006568.1 Protein Homology CDS 644998 645717 . - 0 ID=cds684;Parent=gene691;Dbxref=Genbank:WP_025244305.1;Name=WP_025244305.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_025244305.1;transl_table=11 NZ_CP006568.1 RefSeq gene 646349 647548 . + . ID=gene692;Name=SOPEG_RS03425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03425;pseudo=true NZ_CP006568.1 Protein Homology CDS 646349 647548 . + 0 ID=cds685;Parent=gene692;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;pseudo=true;transl_except=(pos:646445..646447%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 647694 648356 . + . ID=gene693;Name=SOPEG_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03430;old_locus_tag=SOPEG_0650 NZ_CP006568.1 Protein Homology CDS 647694 648356 . + 0 ID=cds686;Parent=gene693;Dbxref=Genbank:WP_025244306.1;Name=WP_025244306.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244306.1;transl_table=11 NZ_CP006568.1 RefSeq gene 648579 649409 . + . ID=gene694;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=SOPEG_RS03435;pseudo=true NZ_CP006568.1 Protein Homology CDS 648579 649409 . + 0 ID=cds687;Parent=gene694;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase;pseudo=true;transl_except=(pos:649116..649118%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 649588 651007 . - . ID=gene695;Name=SOPEG_RS03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03440;pseudo=true NZ_CP006568.1 Protein Homology CDS 649588 651007 . - 0 ID=cds688;Parent=gene695;Note=septal ring component that protects the divisome from stress;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cell division protein FtsI;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 651239 651973 . - . ID=gene696;Name=SOPEG_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03445;old_locus_tag=SOPEG_0653 NZ_CP006568.1 Protein Homology CDS 651239 651973 . - 0 ID=cds689;Parent=gene696;Dbxref=Genbank:WP_025244307.1;Name=WP_025244307.1;gbkey=CDS;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=WP_025244307.1;transl_table=11 NZ_CP006568.1 RefSeq gene 652130 654403 . - . ID=gene697;Name=SOPEG_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03450;old_locus_tag=SOPEG_0654 NZ_CP006568.1 Protein Homology CDS 652130 654403 . - 0 ID=cds690;Parent=gene697;Dbxref=Genbank:WP_025244308.1;Name=WP_025244308.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_025244308.1;transl_table=11 NZ_CP006568.1 RefSeq gene 654676 654990 . + . ID=gene698;Name=SOPEG_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03455;old_locus_tag=SOPEG_0655 NZ_CP006568.1 Protein Homology CDS 654676 654990 . + 0 ID=cds691;Parent=gene698;Dbxref=Genbank:WP_025244309.1;Name=WP_025244309.1;Note=catalyzes the oxidation of menadiol to menadione;gbkey=CDS;product=quinol monooxygenase;protein_id=WP_025244309.1;transl_table=11 NZ_CP006568.1 RefSeq gene 655388 656540 . - . ID=gene699;Name=SOPEG_RS03460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03460;pseudo=true NZ_CP006568.1 Protein Homology CDS 655388 656540 . - 0 ID=cds692;Parent=gene699;exception=annotated by transcript or proteomic data;gbkey=CDS;product=methylthioribose kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 656691 657026 . + . ID=gene700;Name=SOPEG_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03465 NZ_CP006568.1 GeneMarkS+ CDS 656691 657026 . + 0 ID=cds693;Parent=gene700;Dbxref=Genbank:WP_025244310.1;Name=WP_025244310.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244310.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 656879 661692 . + . ID=id90;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 656987 657745 . - . ID=gene701;Name=SOPEG_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03470;old_locus_tag=SOPEG_0657 NZ_CP006568.1 Protein Homology CDS 656987 657745 . - 0 ID=cds694;Parent=gene701;Dbxref=Genbank:WP_038468165.1;Name=WP_038468165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468165.1;transl_table=11 NZ_CP006568.1 RefSeq gene 658578 659786 . - . ID=gene702;Name=SOPEG_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03475;old_locus_tag=SOPEG_0659 NZ_CP006568.1 Protein Homology CDS 658578 659786 . - 0 ID=cds695;Parent=gene702;Dbxref=Genbank:WP_025244312.1;Name=WP_025244312.1;gbkey=CDS;product=transposase;protein_id=WP_025244312.1;transl_table=11 NZ_CP006568.1 RefSeq gene 660707 661629 . + . ID=gene703;Name=SOPEG_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03480;pseudo=true NZ_CP006568.1 Protein Homology CDS 660707 661629 . + 0 ID=cds696;Parent=gene703;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 661763 662724 . - . ID=gene704;Name=SOPEG_RS03485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03485;pseudo=true NZ_CP006568.1 Protein Homology CDS 661763 662724 . - 0 ID=cds697;Parent=gene704;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 662798 662977 . - . ID=gene705;Name=SOPEG_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03490 NZ_CP006568.1 Protein Homology CDS 662798 662977 . - 0 ID=cds698;Parent=gene705;Dbxref=Genbank:WP_038468168.1;Name=WP_038468168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468168.1;transl_table=11 NZ_CP006568.1 RefSeq gene 663121 663194 . - . ID=gene706;Name=SOPEG_RS03495;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03495;old_locus_tag=SOPEG_t0662 NZ_CP006568.1 tRNAscan-SE tRNA 663121 663194 . - . ID=rna7;Parent=gene706;anticodon=(pos:complement(663160..663162));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 tRNAscan-SE exon 663121 663194 . - . ID=id91;Parent=rna7;anticodon=(pos:complement(663160..663162));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 RefSeq gene 663201 663277 . - . ID=gene707;Name=SOPEG_RS03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03500;old_locus_tag=SOPEG_t0663 NZ_CP006568.1 tRNAscan-SE tRNA 663201 663277 . - . ID=rna8;Parent=gene707;anticodon=(pos:complement(663241..663243));gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 tRNAscan-SE exon 663201 663277 . - . ID=id92;Parent=rna8;anticodon=(pos:complement(663241..663243));gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 RefSeq gene 663326 663395 . - . ID=gene708;Name=SOPEG_RS03505;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03505;old_locus_tag=SOPEG_t0664 NZ_CP006568.1 tRNAscan-SE tRNA 663326 663395 . - . ID=rna9;Parent=gene708;anticodon=(pos:complement(663361..663363));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 tRNAscan-SE exon 663326 663395 . - . ID=id93;Parent=rna9;anticodon=(pos:complement(663361..663363));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 RefSeq gene 663442 663516 . - . ID=gene709;Name=SOPEG_RS03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03510;old_locus_tag=SOPEG_t0665 NZ_CP006568.1 tRNAscan-SE tRNA 663442 663516 . - . ID=rna10;Parent=gene709;anticodon=(pos:complement(663482..663484));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 tRNAscan-SE exon 663442 663516 . - . ID=id94;Parent=rna10;anticodon=(pos:complement(663482..663484));gbkey=tRNA;product=tRNA-Gln NZ_CP006568.1 RefSeq gene 663537 663621 . - . ID=gene710;Name=SOPEG_RS03515;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03515;old_locus_tag=SOPEG_t0666 NZ_CP006568.1 tRNAscan-SE tRNA 663537 663621 . - . ID=rna11;Parent=gene710;anticodon=(pos:complement(663585..663587));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 663537 663621 . - . ID=id95;Parent=rna11;anticodon=(pos:complement(663585..663587));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 663632 663708 . - . ID=gene711;Name=SOPEG_RS03520;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03520;old_locus_tag=SOPEG_t0667 NZ_CP006568.1 tRNAscan-SE tRNA 663632 663708 . - . ID=rna12;Parent=gene711;anticodon=(pos:complement(663672..663674));gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 tRNAscan-SE exon 663632 663708 . - . ID=id96;Parent=rna12;anticodon=(pos:complement(663672..663674));gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 RefSeq gene 664156 665817 . - . ID=gene712;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=SOPEG_RS03525;old_locus_tag=SOPEG_0668 NZ_CP006568.1 Protein Homology CDS 664156 665817 . - 0 ID=cds699;Parent=gene712;Dbxref=Genbank:WP_025244313.1;Name=WP_025244313.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_025244313.1;transl_table=11 NZ_CP006568.1 RefSeq gene 666320 667558 . - . ID=gene713;Name=SOPEG_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03530;old_locus_tag=SOPEG_0669 NZ_CP006568.1 Protein Homology CDS 666320 667558 . - 0 ID=cds700;Parent=gene713;Dbxref=Genbank:WP_025244314.1;Name=WP_025244314.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244314.1;transl_table=11 NZ_CP006568.1 RefSeq gene 667576 668718 . - . ID=gene714;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03535;old_locus_tag=SOPEG_0670 NZ_CP006568.1 Protein Homology CDS 667576 668718 . - 0 ID=cds701;Parent=gene714;Dbxref=Genbank:WP_025244315.1;Name=WP_025244315.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_025244315.1;transl_table=11 NZ_CP006568.1 RefSeq gene 668735 669538 . - . ID=gene715;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SOPEG_RS03540;old_locus_tag=SOPEG_0671 NZ_CP006568.1 Protein Homology CDS 668735 669538 . - 0 ID=cds702;Parent=gene715;Dbxref=Genbank:WP_025244316.1;Name=WP_025244316.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_025244316.1;transl_table=11 NZ_CP006568.1 RefSeq gene 669868 671913 . + . ID=gene716;Name=SOPEG_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03545;old_locus_tag=SOPEG_0672 NZ_CP006568.1 Protein Homology CDS 669868 671913 . + 0 ID=cds703;Parent=gene716;Dbxref=Genbank:WP_025244317.1;Name=WP_025244317.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetyl glucosamine transporter subunits IIABC;protein_id=WP_025244317.1;transl_table=11 NZ_CP006568.1 RefSeq gene 672114 673784 . + . ID=gene717;Name=SOPEG_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03550;old_locus_tag=SOPEG_0673 NZ_CP006568.1 Protein Homology CDS 672114 673784 . + 0 ID=cds704;Parent=gene717;Dbxref=Genbank:WP_025244318.1;Name=WP_025244318.1;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_025244318.1;transl_table=11 NZ_CP006568.1 RefSeq gene 673851 674114 . - . ID=gene718;Name=SOPEG_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03555 NZ_CP006568.1 GeneMarkS+ CDS 673851 674114 . - 0 ID=cds705;Parent=gene718;Dbxref=Genbank:WP_025244319.1;Name=WP_025244319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244319.1;transl_table=11 NZ_CP006568.1 RefSeq gene 674258 674842 . + . ID=gene719;Name=SOPEG_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03560;old_locus_tag=SOPEG_0674 NZ_CP006568.1 GeneMarkS+ CDS 674258 674842 . + 0 ID=cds706;Parent=gene719;Dbxref=Genbank:WP_025244320.1;Name=WP_025244320.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244320.1;transl_table=11 NZ_CP006568.1 RefSeq gene 675266 675733 . - . ID=gene720;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=SOPEG_RS03565;old_locus_tag=SOPEG_0675 NZ_CP006568.1 Protein Homology CDS 675266 675733 . - 0 ID=cds707;Parent=gene720;Dbxref=Genbank:WP_025244321.1;Name=WP_025244321.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=WP_025244321.1;transl_table=11 NZ_CP006568.1 RefSeq gene 676059 676574 . - . ID=gene721;Name=SOPEG_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03570;old_locus_tag=SOPEG_0676 NZ_CP006568.1 Protein Homology CDS 676059 676574 . - 0 ID=cds708;Parent=gene721;Dbxref=Genbank:WP_051419992.1;Name=WP_051419992.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin FldA;protein_id=WP_051419992.1;transl_table=11 NZ_CP006568.1 RefSeq gene 676873 677160 . - . ID=gene722;Name=SOPEG_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03575;old_locus_tag=SOPEG_0677 NZ_CP006568.1 Protein Homology CDS 676873 677160 . - 0 ID=cds709;Parent=gene722;Dbxref=Genbank:WP_025244322.1;Name=WP_025244322.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_025244322.1;transl_table=11 NZ_CP006568.1 RefSeq gene 677342 678108 . - . ID=gene723;Name=SOPEG_RS03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03580;pseudo=true NZ_CP006568.1 Protein Homology CDS 677342 678108 . - 0 ID=cds710;Parent=gene723;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acyl-CoA esterase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 678320 678874 . + . ID=gene724;Name=SOPEG_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03585;old_locus_tag=SOPEG_0679 NZ_CP006568.1 Protein Homology CDS 678320 678874 . + 0 ID=cds711;Parent=gene724;Dbxref=Genbank:WP_025244323.1;Name=WP_025244323.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=replication initiation regulator SeqA;protein_id=WP_025244323.1;transl_table=11 NZ_CP006568.1 RefSeq gene 678895 680539 . + . ID=gene725;Name=SOPEG_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03590;pseudo=true NZ_CP006568.1 Protein Homology CDS 678895 680539 . + 0 ID=cds712;Parent=gene725;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoglucomutase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 680861 681637 . + . ID=gene726;Name=SOPEG_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03595;old_locus_tag=SOPEG_0681 NZ_CP006568.1 Protein Homology CDS 680861 681637 . + 0 ID=cds713;Parent=gene726;Dbxref=Genbank:WP_025244324.1;Name=WP_025244324.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244324.1;transl_table=11 NZ_CP006568.1 RefSeq gene 681653 683095 . + . ID=gene727;Name=SOPEG_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03600;old_locus_tag=SOPEG_0682 NZ_CP006568.1 Protein Homology CDS 681653 683095 . + 0 ID=cds714;Parent=gene727;Dbxref=Genbank:WP_025244325.1;Name=WP_025244325.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_025244325.1;transl_table=11 NZ_CP006568.1 RefSeq gene 683109 683852 . + . ID=gene728;Name=SOPEG_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03605;old_locus_tag=SOPEG_0683 NZ_CP006568.1 Protein Homology CDS 683109 683852 . + 0 ID=cds715;Parent=gene728;Dbxref=Genbank:WP_025244326.1;Name=WP_025244326.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_025244326.1;transl_table=11 NZ_CP006568.1 RefSeq gene 683966 684622 . + . ID=gene729;Name=SOPEG_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03610;old_locus_tag=SOPEG_0684 NZ_CP006568.1 Protein Homology CDS 683966 684622 . + 0 ID=cds716;Parent=gene729;Dbxref=Genbank:WP_025244327.1;Name=WP_025244327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244327.1;transl_table=11 NZ_CP006568.1 RefSeq gene 684616 685524 . + . ID=gene730;Name=SOPEG_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03615;old_locus_tag=SOPEG_0685 NZ_CP006568.1 Protein Homology CDS 684616 685524 . + 0 ID=cds717;Parent=gene730;Dbxref=Genbank:WP_025244328.1;Name=WP_025244328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244328.1;transl_table=11 NZ_CP006568.1 RefSeq gene 685570 686850 . - . ID=gene731;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03620;old_locus_tag=SOPEG_0686 NZ_CP006568.1 Protein Homology CDS 685570 686850 . - 0 ID=cds718;Parent=gene731;Dbxref=Genbank:WP_025244329.1;Name=WP_025244329.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_025244329.1;transl_table=11 NZ_CP006568.1 RefSeq gene 687468 687857 . + . ID=gene732;Name=SOPEG_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03625;old_locus_tag=SOPEG_0687 NZ_CP006568.1 Protein Homology CDS 687468 687857 . + 0 ID=cds719;Parent=gene732;Dbxref=Genbank:WP_025244330.1;Name=WP_025244330.1;gbkey=CDS;product=succinate dehydrogenase;protein_id=WP_025244330.1;transl_table=11 NZ_CP006568.1 RefSeq gene 687851 688192 . + . ID=gene733;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=SOPEG_RS03630;old_locus_tag=SOPEG_0688 NZ_CP006568.1 Protein Homology CDS 687851 688192 . + 0 ID=cds720;Parent=gene733;Dbxref=Genbank:WP_025244331.1;Name=WP_025244331.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase;protein_id=WP_025244331.1;transl_table=11 NZ_CP006568.1 RefSeq gene 688196 689962 . + . ID=gene734;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03635;old_locus_tag=SOPEG_0689 NZ_CP006568.1 Protein Homology CDS 688196 689962 . + 0 ID=cds721;Parent=gene734;Dbxref=Genbank:WP_025244332.1;Name=WP_025244332.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase;protein_id=WP_025244332.1;transl_table=11 NZ_CP006568.1 RefSeq gene 689978 690694 . + . ID=gene735;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SOPEG_RS03640;old_locus_tag=SOPEG_0690 NZ_CP006568.1 Protein Homology CDS 689978 690694 . + 0 ID=cds722;Parent=gene735;Dbxref=Genbank:WP_025244333.1;Name=WP_025244333.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase;protein_id=WP_025244333.1;transl_table=11 NZ_CP006568.1 RefSeq gene 690906 693713 . + . ID=gene736;Name=SOPEG_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03645;old_locus_tag=SOPEG_0691 NZ_CP006568.1 Protein Homology CDS 690906 693713 . + 0 ID=cds723;Parent=gene736;Dbxref=Genbank:WP_025244334.1;Name=WP_025244334.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase;protein_id=WP_025244334.1;transl_table=11 NZ_CP006568.1 RefSeq gene 693729 694949 . + . ID=gene737;Name=SOPEG_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03650;old_locus_tag=SOPEG_0692 NZ_CP006568.1 Protein Homology CDS 693729 694949 . + 0 ID=cds724;Parent=gene737;Dbxref=Genbank:WP_025244335.1;Name=WP_025244335.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_025244335.1;transl_table=11 NZ_CP006568.1 RefSeq gene 695064 696230 . + . ID=gene738;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=SOPEG_RS03655;old_locus_tag=SOPEG_0693 NZ_CP006568.1 Protein Homology CDS 695064 696230 . + 0 ID=cds725;Parent=gene738;Dbxref=Genbank:WP_025244336.1;Name=WP_025244336.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=WP_025244336.1;transl_table=11 NZ_CP006568.1 RefSeq gene 696230 697102 . + . ID=gene739;Name=SOPEG_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03660;old_locus_tag=SOPEG_0694 NZ_CP006568.1 Protein Homology CDS 696230 697102 . + 0 ID=cds726;Parent=gene739;Dbxref=Genbank:WP_025244337.1;Name=WP_025244337.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_025244337.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 697633 698956 . + . ID=id97;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 697692 698879 . - . ID=gene740;Name=SOPEG_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03665 NZ_CP006568.1 Protein Homology CDS 697692 698879 . - 0 ID=cds727;Parent=gene740;Dbxref=Genbank:WP_038468177.1;Name=WP_038468177.1;gbkey=CDS;product=transposase;protein_id=WP_038468177.1;transl_table=11 NZ_CP006568.1 RefSeq gene 699257 700825 . + . ID=gene741;Name=SOPEG_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03670;old_locus_tag=SOPEG_0696 NZ_CP006568.1 Protein Homology CDS 699257 700825 . + 0 ID=cds728;Parent=gene741;Dbxref=Genbank:WP_025244338.1;Name=WP_025244338.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome d terminal oxidase subunit I;protein_id=WP_025244338.1;transl_table=11 NZ_CP006568.1 RefSeq gene 700843 701982 . + . ID=gene742;Name=SOPEG_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03675;old_locus_tag=SOPEG_0697 NZ_CP006568.1 Protein Homology CDS 700843 701982 . + 0 ID=cds729;Parent=gene742;Dbxref=Genbank:WP_025244339.1;Name=WP_025244339.1;gbkey=CDS;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=WP_025244339.1;transl_table=11 NZ_CP006568.1 RefSeq gene 702109 702396 . + . ID=gene743;Name=SOPEG_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03680;old_locus_tag=SOPEG_0699 NZ_CP006568.1 Protein Homology CDS 702109 702396 . + 0 ID=cds730;Parent=gene743;Dbxref=Genbank:WP_025244340.1;Name=WP_025244340.1;gbkey=CDS;product=cytochrome bd biosynthesis protein;protein_id=WP_025244340.1;transl_table=11 NZ_CP006568.1 RefSeq gene 702529 702934 . + . ID=gene744;Name=SOPEG_RS03685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03685;pseudo=true NZ_CP006568.1 Protein Homology CDS 702529 702934 . + 0 ID=cds731;Parent=gene744;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 702931 703617 . + . ID=gene745;Name=SOPEG_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03690;old_locus_tag=SOPEG_0701 NZ_CP006568.1 Protein Homology CDS 702931 703617 . + 0 ID=cds732;Parent=gene745;Dbxref=Genbank:WP_025244341.1;Name=WP_025244341.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter TolQ;protein_id=WP_025244341.1;transl_table=11 NZ_CP006568.1 RefSeq gene 703633 704055 . + . ID=gene746;Name=SOPEG_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03695;old_locus_tag=SOPEG_0702 NZ_CP006568.1 Protein Homology CDS 703633 704055 . + 0 ID=cds733;Parent=gene746;Dbxref=Genbank:WP_025244342.1;Name=WP_025244342.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter TolR;protein_id=WP_025244342.1;transl_table=11 NZ_CP006568.1 RefSeq gene 704110 704979 . + . ID=gene747;Name=SOPEG_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03700;old_locus_tag=SOPEG_0703 NZ_CP006568.1 Protein Homology CDS 704110 704979 . + 0 ID=cds734;Parent=gene747;Dbxref=Genbank:WP_025244343.1;Name=WP_025244343.1;gbkey=CDS;product=cell division protein FtsX;protein_id=WP_025244343.1;transl_table=11 NZ_CP006568.1 RefSeq gene 705136 706428 . + . ID=gene748;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=SOPEG_RS03705;old_locus_tag=SOPEG_0704 NZ_CP006568.1 Protein Homology CDS 705136 706428 . + 0 ID=cds735;Parent=gene748;Dbxref=Genbank:WP_025244344.1;Name=WP_025244344.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=translocation protein TolB;protein_id=WP_025244344.1;transl_table=11 NZ_CP006568.1 RefSeq gene 706472 706990 . + . ID=gene749;Name=SOPEG_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03710;old_locus_tag=SOPEG_0705 NZ_CP006568.1 Protein Homology CDS 706472 706990 . + 0 ID=cds736;Parent=gene749;Dbxref=Genbank:WP_025244345.1;Name=WP_025244345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244345.1;transl_table=11 NZ_CP006568.1 RefSeq gene 707000 707788 . + . ID=gene750;Name=SOPEG_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03715;old_locus_tag=SOPEG_0706 NZ_CP006568.1 Protein Homology CDS 707000 707788 . + 0 ID=cds737;Parent=gene750;Dbxref=Genbank:WP_025244346.1;Name=WP_025244346.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein;protein_id=WP_025244346.1;transl_table=11 NZ_CP006568.1 RefSeq gene 707966 708041 . + . ID=gene751;Name=SOPEG_RS03720;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03720;old_locus_tag=SOPEG_t0707 NZ_CP006568.1 tRNAscan-SE tRNA 707966 708041 . + . ID=rna13;Parent=gene751;anticodon=(pos:707999..708001);gbkey=tRNA;product=tRNA-Lys NZ_CP006568.1 tRNAscan-SE exon 707966 708041 . + . ID=id98;Parent=rna13;anticodon=(pos:707999..708001);gbkey=tRNA;product=tRNA-Lys NZ_CP006568.1 RefSeq gene 708295 709341 . + . ID=gene752;Name=SOPEG_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03725;old_locus_tag=SOPEG_0708 NZ_CP006568.1 Protein Homology CDS 708295 709341 . + 0 ID=cds738;Parent=gene752;Dbxref=Genbank:WP_025244347.1;Name=WP_025244347.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthetase;protein_id=WP_025244347.1;transl_table=11 NZ_CP006568.1 RefSeq gene 709544 709993 . + . ID=gene753;Name=SOPEG_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03730 NZ_CP006568.1 Protein Homology CDS 709544 709993 . + 0 ID=cds739;Parent=gene753;Dbxref=Genbank:WP_051419427.1;Name=WP_051419427.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 710352 711201 . - . ID=gene754;Name=SOPEG_RS03735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03735;pseudo=true NZ_CP006568.1 Protein Homology CDS 710352 711201 . - 0 ID=cds740;Parent=gene754;Note=involved in zinc efflux across the cytoplasmic membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=zinc transporter ZitB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 711317 714951 . + . ID=id99;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 711781 712989 . - . ID=gene755;Name=SOPEG_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03740;old_locus_tag=SOPEG_0711 NZ_CP006568.1 Protein Homology CDS 711781 712989 . - 0 ID=cds741;Parent=gene755;Dbxref=Genbank:WP_025244348.1;Name=WP_025244348.1;gbkey=CDS;product=transposase;protein_id=WP_025244348.1;transl_table=11 NZ_CP006568.1 RefSeq gene 713190 713891 . + . ID=gene756;Name=SOPEG_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03745 NZ_CP006568.1 Protein Homology CDS 713190 713891 . + 0 ID=cds742;Parent=gene756;Dbxref=Genbank:WP_051419429.1;Name=WP_051419429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419429.1;transl_table=11 NZ_CP006568.1 RefSeq gene 714126 714467 . + . ID=gene757;Name=SOPEG_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03755 NZ_CP006568.1 Protein Homology CDS 714126 714467 . + 0 ID=cds743;Parent=gene757;Dbxref=Genbank:WP_051419431.1;Name=WP_051419431.1;gbkey=CDS;product=transposase;protein_id=WP_051419431.1;transl_table=11 NZ_CP006568.1 RefSeq gene 714449 714889 . + . ID=gene758;Name=SOPEG_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03760 NZ_CP006568.1 Protein Homology CDS 714449 714889 . + 0 ID=cds744;Parent=gene758;Dbxref=Genbank:WP_051419433.1;Name=WP_051419433.1;gbkey=CDS;product=transposase;protein_id=WP_051419433.1;transl_table=11 NZ_CP006568.1 RefSeq gene 715110 715592 . - . ID=gene759;Name=SOPEG_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03765 NZ_CP006568.1 Protein Homology CDS 715110 715592 . - 0 ID=cds745;Parent=gene759;Dbxref=Genbank:WP_051419434.1;Name=WP_051419434.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419434.1;transl_table=11 NZ_CP006568.1 RefSeq gene 715576 715809 . - . ID=gene760;Name=SOPEG_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03770 NZ_CP006568.1 Protein Homology CDS 715576 715809 . - 0 ID=cds746;Parent=gene760;Dbxref=Genbank:WP_025244350.1;Name=WP_025244350.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244350.1;transl_table=11 NZ_CP006568.1 RefSeq gene 715814 716806 . - . ID=gene761;Name=SOPEG_RS03775;end_range=716806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03775;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 715814 716806 . - 0 ID=cds747;Parent=gene761;end_range=716806,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 716799 717865 . + . ID=id100;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 716882 717805 . + . ID=gene762;Name=SOPEG_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03780;old_locus_tag=SOPEG_0716 NZ_CP006568.1 Protein Homology CDS 716882 717805 . + 0 ID=cds748;Parent=gene762;Dbxref=Genbank:WP_025243939.1;Name=WP_025243939.1;gbkey=CDS;product=transposase;protein_id=WP_025243939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 717973 718341 . - . ID=gene763;Name=SOPEG_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03785 NZ_CP006568.1 Protein Homology CDS 717973 718341 . - 0 ID=cds749;Parent=gene763;Dbxref=Genbank:WP_051419993.1;Name=WP_051419993.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419993.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 718272 720898 . + . ID=id101;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 718499 719173 . + . ID=gene764;Name=SOPEG_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03790 NZ_CP006568.1 Protein Homology CDS 718499 719173 . + 0 ID=cds750;Parent=gene764;Dbxref=Genbank:WP_038469535.1;Name=WP_038469535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469535.1;transl_table=11 NZ_CP006568.1 RefSeq gene 719371 720015 . + . ID=gene765;Name=SOPEG_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03795 NZ_CP006568.1 Protein Homology CDS 719371 720015 . + 0 ID=cds751;Parent=gene765;Dbxref=Genbank:WP_051419441.1;Name=WP_051419441.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419441.1;transl_table=11 NZ_CP006568.1 RefSeq gene 720027 720776 . + . ID=gene766;Name=SOPEG_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03800;old_locus_tag=SOPEG_0719 NZ_CP006568.1 Protein Homology CDS 720027 720776 . + 0 ID=cds752;Parent=gene766;Dbxref=Genbank:WP_025244354.1;Name=WP_025244354.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244354.1;transl_table=11 NZ_CP006568.1 RefSeq gene 722052 722252 . + . ID=gene767;Name=SOPEG_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03805 NZ_CP006568.1 GeneMarkS+ CDS 722052 722252 . + 0 ID=cds753;Parent=gene767;Dbxref=Genbank:WP_038468184.1;Name=WP_038468184.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468184.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 722257 722362 . + . ID=id102;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 722420 723325 . + . ID=gene768;Name=SOPEG_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03810;old_locus_tag=SOPEG_0720 NZ_CP006568.1 Protein Homology CDS 722420 723325 . + 0 ID=cds754;Parent=gene768;Dbxref=Genbank:WP_025244355.1;Name=WP_025244355.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244355.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 722825 722967 . + . ID=id103;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 723334 724653 . + . ID=id104;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 723392 724579 . - . ID=gene769;Name=SOPEG_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03815 NZ_CP006568.1 Protein Homology CDS 723392 724579 . - 0 ID=cds755;Parent=gene769;Dbxref=Genbank:WP_025244356.1;Name=WP_025244356.1;gbkey=CDS;product=transposase;protein_id=WP_025244356.1;transl_table=11 NZ_CP006568.1 RefSeq gene 724636 725709 . + . ID=gene770;Name=SOPEG_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03820 NZ_CP006568.1 Protein Homology CDS 724636 725709 . + 0 ID=cds756;Parent=gene770;Dbxref=Genbank:WP_038468187.1;Name=WP_038468187.1;gbkey=CDS;product=transposase;protein_id=WP_038468187.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 724689 739482 . + . ID=id105;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 725720 726010 . - . ID=gene771;Name=SOPEG_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03825 NZ_CP006568.1 Protein Homology CDS 725720 726010 . - 0 ID=cds757;Parent=gene771;Dbxref=Genbank:WP_025244358.1;Name=WP_025244358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244358.1;transl_table=11 NZ_CP006568.1 RefSeq gene 726253 726328 . - . ID=gene772;Name=SOPEG_RS03830;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS03830;old_locus_tag=SOPEG_t0724 NZ_CP006568.1 tRNAscan-SE tRNA 726253 726328 . - . ID=rna14;Parent=gene772;anticodon=(pos:complement(726293..726295));gbkey=tRNA;product=tRNA-Phe NZ_CP006568.1 tRNAscan-SE exon 726253 726328 . - . ID=id106;Parent=rna14;anticodon=(pos:complement(726293..726295));gbkey=tRNA;product=tRNA-Phe NZ_CP006568.1 RefSeq gene 726435 727010 . - . ID=gene773;Name=SOPEG_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03835;old_locus_tag=SOPEG_0725 NZ_CP006568.1 Protein Homology CDS 726435 727010 . - 0 ID=cds758;Parent=gene773;Dbxref=Genbank:WP_025244359.1;Name=WP_025244359.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244359.1;transl_table=11 NZ_CP006568.1 RefSeq gene 727053 728771 . - . ID=gene774;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=SOPEG_RS03840;old_locus_tag=SOPEG_0726 NZ_CP006568.1 Protein Homology CDS 727053 728771 . - 0 ID=cds759;Parent=gene774;Dbxref=Genbank:WP_025244360.1;Name=WP_025244360.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein precursor;protein_id=WP_025244360.1;transl_table=11 NZ_CP006568.1 RefSeq gene 729184 729387 . - . ID=gene775;Name=SOPEG_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03845 NZ_CP006568.1 GeneMarkS+ CDS 729184 729387 . - 0 ID=cds760;Parent=gene775;Dbxref=Genbank:WP_038468191.1;Name=WP_038468191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468191.1;transl_table=11 NZ_CP006568.1 RefSeq gene 729538 730758 . + . ID=gene776;Name=SOPEG_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03850;old_locus_tag=SOPEG_0729 NZ_CP006568.1 Protein Homology CDS 729538 730758 . + 0 ID=cds761;Parent=gene776;Dbxref=Genbank:WP_025244362.1;Name=WP_025244362.1;gbkey=CDS;product=transposase;protein_id=WP_025244362.1;transl_table=11 NZ_CP006568.1 RefSeq gene 731144 732339 . - . ID=gene777;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=pseudogene;locus_tag=SOPEG_RS03855;partial=true;pseudo=true;start_range=.,731144 NZ_CP006568.1 Protein Homology CDS 731144 732339 . - 0 ID=cds762;Parent=gene777;Note=catalyzes the formation of fumarate from aspartate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=aspA;partial=true;product=aspartate ammonia-lyase;pseudo=true;start_range=.,731144;transl_table=11 NZ_CP006568.1 RefSeq gene 732692 733147 . + . ID=gene778;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03860;old_locus_tag=SOPEG_0730 NZ_CP006568.1 Protein Homology CDS 732692 733147 . + 0 ID=cds763;Parent=gene778;Dbxref=Genbank:WP_025244363.1;Name=WP_025244363.1;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;gbkey=CDS;gene=fxsA;product=phage T7 F exclusion suppressor FxsA;protein_id=WP_025244363.1;transl_table=11 NZ_CP006568.1 RefSeq gene 733368 733661 . + . ID=gene779;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SOPEG_RS03865;old_locus_tag=SOPEG_0731 NZ_CP006568.1 Protein Homology CDS 733368 733661 . + 0 ID=cds764;Parent=gene779;Dbxref=Genbank:WP_025244364.1;Name=WP_025244364.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_025244364.1;transl_table=11 NZ_CP006568.1 RefSeq gene 733707 735353 . + . ID=gene780;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SOPEG_RS03870;old_locus_tag=SOPEG_0732 NZ_CP006568.1 Protein Homology CDS 733707 735353 . + 0 ID=cds765;Parent=gene780;Dbxref=Genbank:WP_025244365.1;Name=WP_025244365.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_025244365.1;transl_table=11 NZ_CP006568.1 RefSeq gene 735555 735911 . + . ID=gene781;Name=SOPEG_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03875;old_locus_tag=SOPEG_0733 NZ_CP006568.1 Protein Homology CDS 735555 735911 . + 0 ID=cds766;Parent=gene781;Dbxref=Genbank:WP_025244366.1;Name=WP_025244366.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244366.1;transl_table=11 NZ_CP006568.1 RefSeq gene 736167 737195 . - . ID=gene782;Name=SOPEG_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03880;old_locus_tag=SOPEG_0734 NZ_CP006568.1 Protein Homology CDS 736167 737195 . - 0 ID=cds767;Parent=gene782;Dbxref=Genbank:WP_025244367.1;Name=WP_025244367.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_025244367.1;transl_table=11 NZ_CP006568.1 RefSeq gene 737237 737806 . + . ID=gene783;Name=SOPEG_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03885;old_locus_tag=SOPEG_0735 NZ_CP006568.1 Protein Homology CDS 737237 737806 . + 0 ID=cds768;Parent=gene783;Dbxref=Genbank:WP_025244368.1;Name=WP_025244368.1;gbkey=CDS;product=elongation factor P;protein_id=WP_025244368.1;transl_table=11 NZ_CP006568.1 RefSeq gene 737976 739406 . - . ID=gene784;Name=SOPEG_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03890 NZ_CP006568.1 Protein Homology CDS 737976 739406 . - 0 ID=cds769;Parent=gene784;Dbxref=Genbank:WP_025244369.1;Name=WP_025244369.1;gbkey=CDS;product=transposase;protein_id=WP_025244369.1;transl_table=11 NZ_CP006568.1 RefSeq gene 739560 740597 . + . ID=gene785;Name=SOPEG_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03895 NZ_CP006568.1 Protein Homology CDS 739560 740597 . + 0 ID=cds770;Parent=gene785;Dbxref=Genbank:WP_025244370.1;Name=WP_025244370.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244370.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 740624 742066 . + . ID=id107;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 740700 741908 . + . ID=gene786;Name=SOPEG_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03900;old_locus_tag=SOPEG_0739 NZ_CP006568.1 Protein Homology CDS 740700 741908 . + 0 ID=cds771;Parent=gene786;Dbxref=Genbank:WP_025244371.1;Name=WP_025244371.1;gbkey=CDS;product=transposase;protein_id=WP_025244371.1;transl_table=11 NZ_CP006568.1 RefSeq gene 742000 742551 . + . ID=gene787;Name=SOPEG_RS03905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03905;partial=true;pseudo=true;start_range=.,742000 NZ_CP006568.1 Protein Homology CDS 742000 742551 . + 0 ID=cds772;Parent=gene787;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,742000;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 742517 743582 . + . ID=id108;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 742599 743522 . + . ID=gene788;Name=SOPEG_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03910;old_locus_tag=SOPEG_0741 NZ_CP006568.1 Protein Homology CDS 742599 743522 . + 0 ID=cds773;Parent=gene788;Dbxref=Genbank:WP_025244373.1;Name=WP_025244373.1;gbkey=CDS;product=transposase;protein_id=WP_025244373.1;transl_table=11 NZ_CP006568.1 RefSeq gene 743846 745066 . + . ID=gene789;Name=SOPEG_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03915 NZ_CP006568.1 GeneMarkS+ CDS 743846 745066 . + 0 ID=cds774;Parent=gene789;Dbxref=Genbank:WP_025244374.1;Name=WP_025244374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244374.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 746336 747395 . + . ID=id109;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 746413 747336 . + . ID=gene790;Name=SOPEG_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03920;old_locus_tag=SOPEG_0745 NZ_CP006568.1 Protein Homology CDS 746413 747336 . + 0 ID=cds775;Parent=gene790;Dbxref=Genbank:WP_025244375.1;Name=WP_025244375.1;gbkey=CDS;product=transposase;protein_id=WP_025244375.1;transl_table=11 NZ_CP006568.1 RefSeq gene 747990 748352 . - . ID=gene791;Name=SOPEG_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03925;old_locus_tag=SOPEG_0746 NZ_CP006568.1 Protein Homology CDS 747990 748352 . - 0 ID=cds776;Parent=gene791;Dbxref=Genbank:WP_038469547.1;Name=WP_038469547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469547.1;transl_table=11 NZ_CP006568.1 RefSeq gene 748830 749894 . + . ID=gene792;Name=SOPEG_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03930;old_locus_tag=SOPEG_0747 NZ_CP006568.1 Protein Homology CDS 748830 749894 . + 0 ID=cds777;Parent=gene792;Dbxref=Genbank:WP_025244377.1;Name=WP_025244377.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_025244377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 749915 751036 . + . ID=gene793;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03935;old_locus_tag=SOPEG_0748 NZ_CP006568.1 Protein Homology CDS 749915 751036 . + 0 ID=cds778;Parent=gene793;Dbxref=Genbank:WP_025244378.1;Name=WP_025244378.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_025244378.1;transl_table=11 NZ_CP006568.1 RefSeq gene 751087 752244 . - . ID=gene794;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=SOPEG_RS03940;old_locus_tag=SOPEG_0749 NZ_CP006568.1 Protein Homology CDS 751087 752244 . - 0 ID=cds779;Parent=gene794;Dbxref=Genbank:WP_025244379.1;Name=WP_025244379.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=chorismate mutase;protein_id=WP_025244379.1;transl_table=11 NZ_CP006568.1 RefSeq gene 752556 752855 . - . ID=gene795;Name=SOPEG_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03945;old_locus_tag=SOPEG_0750 NZ_CP006568.1 Protein Homology CDS 752556 752855 . - 0 ID=cds780;Parent=gene795;Dbxref=Genbank:WP_038468194.1;Name=WP_038468194.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=translation inhibitor protein RaiA;protein_id=WP_038468194.1;transl_table=11 NZ_CP006568.1 RefSeq gene 753091 753822 . - . ID=gene796;Name=SOPEG_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03950;old_locus_tag=SOPEG_0751 NZ_CP006568.1 Protein Homology CDS 753091 753822 . - 0 ID=cds781;Parent=gene796;Dbxref=Genbank:WP_025244380.1;Name=WP_025244380.1;gbkey=CDS;product=membrane biogenesis protein;protein_id=WP_025244380.1;transl_table=11 NZ_CP006568.1 RefSeq gene 753954 754934 . + . ID=gene797;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=SOPEG_RS03955;old_locus_tag=SOPEG_0752 NZ_CP006568.1 Protein Homology CDS 753954 754934 . + 0 ID=cds782;Parent=gene797;Dbxref=Genbank:WP_025244381.1;Name=WP_025244381.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridylate synthase;protein_id=WP_025244381.1;transl_table=11 NZ_CP006568.1 RefSeq gene 754931 755662 . + . ID=gene798;Name=SOPEG_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03960;old_locus_tag=SOPEG_0753 NZ_CP006568.1 Protein Homology CDS 754931 755662 . + 0 ID=cds783;Parent=gene798;Dbxref=Genbank:WP_025244382.1;Name=WP_025244382.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244382.1;transl_table=11 NZ_CP006568.1 RefSeq gene 755794 758367 . + . ID=gene799;Name=SOPEG_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03965;old_locus_tag=SOPEG_0754 NZ_CP006568.1 Protein Homology CDS 755794 758367 . + 0 ID=cds784;Parent=gene799;Dbxref=Genbank:WP_025244383.1;Name=WP_025244383.1;gbkey=CDS;product=protein disaggregation chaperone;protein_id=WP_025244383.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 758744 759891 . + . ID=id110;gbkey=repeat_region NZ_CP006568.1 RefSeq region 759040 759898 . + . ID=id111;Note=possible 16S ribosomal RNA but 16S or 23S rRNA prediction is too short;gbkey=misc_feature NZ_CP006568.1 RefSeq repeat_region 759895 760544 . + . ID=id112;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 759971 761185 . + . ID=gene800;Name=SOPEG_RS03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03970;pseudo=true NZ_CP006568.1 Protein Homology CDS 759971 761185 . + 0 ID=cds785;Parent=gene800;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:760584..760586%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 760620 762752 . + . ID=id113;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 761221 761349 . - . ID=gene801;Name=SOPEG_RS03975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS03975;partial=true;pseudo=true;start_range=.,761221 NZ_CP006568.1 Protein Homology CDS 761221 761349 . - 0 ID=cds786;Parent=gene801;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,761221;transl_table=11 NZ_CP006568.1 RefSeq gene 761466 762674 . - . ID=gene802;Name=SOPEG_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03980;old_locus_tag=SOPEG_0757 NZ_CP006568.1 Protein Homology CDS 761466 762674 . - 0 ID=cds787;Parent=gene802;Dbxref=Genbank:WP_025244388.1;Name=WP_025244388.1;gbkey=CDS;product=transposase;protein_id=WP_025244388.1;transl_table=11 NZ_CP006568.1 RefSeq gene 762913 763125 . + . ID=gene803;Name=SOPEG_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22495 NZ_CP006568.1 GeneMarkS+ CDS 762913 763125 . + 0 ID=cds788;Parent=gene803;Dbxref=Genbank:WP_051419443.1;Name=WP_051419443.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 763113 763484 . - . ID=gene804;Name=SOPEG_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03985 NZ_CP006568.1 Protein Homology CDS 763113 763484 . - 0 ID=cds789;Parent=gene804;Dbxref=Genbank:WP_051419445.1;Name=WP_051419445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419445.1;transl_table=11 NZ_CP006568.1 RefSeq gene 763481 764116 . - . ID=gene805;Name=SOPEG_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03990;old_locus_tag=SOPEG_0759 NZ_CP006568.1 Protein Homology CDS 763481 764116 . - 0 ID=cds790;Parent=gene805;Dbxref=Genbank:WP_025244389.1;Name=WP_025244389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244389.1;transl_table=11 NZ_CP006568.1 RefSeq gene 764526 765335 . + . ID=gene806;Name=SOPEG_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS03995 NZ_CP006568.1 Protein Homology CDS 764526 765335 . + 0 ID=cds791;Parent=gene806;Dbxref=Genbank:WP_025244390.1;Name=WP_025244390.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244390.1;transl_table=11 NZ_CP006568.1 RefSeq gene 765369 766745 . - . ID=gene807;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=SOPEG_RS04000;old_locus_tag=SOPEG_0761 NZ_CP006568.1 Protein Homology CDS 765369 766745 . - 0 ID=cds792;Parent=gene807;Dbxref=Genbank:WP_025244391.1;Name=WP_025244391.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_025244391.1;transl_table=11 NZ_CP006568.1 RefSeq gene 766832 767584 . - . ID=gene808;Name=SOPEG_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04005;old_locus_tag=SOPEG_0762 NZ_CP006568.1 Protein Homology CDS 766832 767584 . - 0 ID=cds793;Parent=gene808;Dbxref=Genbank:WP_025244392.1;Name=WP_025244392.1;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_025244392.1;transl_table=11 NZ_CP006568.1 RefSeq gene 767630 768367 . + . ID=gene809;Name=SOPEG_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04010;old_locus_tag=SOPEG_0763 NZ_CP006568.1 Protein Homology CDS 767630 768367 . + 0 ID=cds794;Parent=gene809;Dbxref=Genbank:WP_025244393.1;Name=WP_025244393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244393.1;transl_table=11 NZ_CP006568.1 RefSeq gene 768375 768866 . - . ID=gene810;Name=SOPEG_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04015;old_locus_tag=SOPEG_0764 NZ_CP006568.1 Protein Homology CDS 768375 768866 . - 0 ID=cds795;Parent=gene810;Dbxref=Genbank:WP_025244394.1;Name=WP_025244394.1;gbkey=CDS;product=ribonuclease H;protein_id=WP_025244394.1;transl_table=11 NZ_CP006568.1 RefSeq gene 768920 769678 . + . ID=gene811;Name=SOPEG_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04020;old_locus_tag=SOPEG_0765 NZ_CP006568.1 Protein Homology CDS 768920 769678 . + 0 ID=cds796;Parent=gene811;Dbxref=Genbank:WP_025244395.1;Name=WP_025244395.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_025244395.1;transl_table=11 NZ_CP006568.1 RefSeq gene 769815 769891 . + . ID=gene812;Name=SOPEG_RS04025;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS04025;old_locus_tag=SOPEG_t0766 NZ_CP006568.1 tRNAscan-SE tRNA 769815 769891 . + . ID=rna15;Parent=gene812;anticodon=(pos:769849..769851);gbkey=tRNA;product=tRNA-Asp NZ_CP006568.1 tRNAscan-SE exon 769815 769891 . + . ID=id114;Parent=rna15;anticodon=(pos:769849..769851);gbkey=tRNA;product=tRNA-Asp NZ_CP006568.1 RefSeq gene 770336 771302 . + . ID=gene813;Name=SOPEG_RS04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04030;pseudo=true NZ_CP006568.1 Protein Homology CDS 770336 771302 . + 0 ID=cds797;Parent=gene813;exception=annotated by transcript or proteomic data;gbkey=CDS;product=allantoinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 771425 772191 . - . ID=gene814;Name=SOPEG_RS04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04035;pseudo=true NZ_CP006568.1 Protein Homology CDS 771425 772191 . - 0 ID=cds798;Parent=gene814;Note=NAD(P)-binding;exception=annotated by transcript or proteomic data;gbkey=CDS;product=carbon-nitrogen hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 772179 773199 . - . ID=gene815;Name=SOPEG_RS04040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04040;pseudo=true NZ_CP006568.1 Protein Homology CDS 772179 773199 . - 0 ID=cds799;Parent=gene815;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=methionine aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 773284 773463 . + . ID=gene816;Name=SOPEG_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04045 NZ_CP006568.1 GeneMarkS+ CDS 773284 773463 . + 0 ID=cds800;Parent=gene816;Dbxref=Genbank:WP_025244396.1;Name=WP_025244396.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244396.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 773447 775390 . + . ID=id115;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 773524 773648 . + . ID=gene817;Name=SOPEG_RS04050;end_range=773648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04050;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 773524 773648 . + 0 ID=cds801;Parent=gene817;end_range=773648,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 773649 774731 . + . ID=gene818;Name=SOPEG_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04055 NZ_CP006568.1 Protein Homology CDS 773649 774731 . + 0 ID=cds802;Parent=gene818;Dbxref=Genbank:WP_051419994.1;Name=WP_051419994.1;gbkey=CDS;product=transposase;protein_id=WP_051419994.1;transl_table=11 NZ_CP006568.1 RefSeq gene 774722 775213 . - . ID=gene819;Name=SOPEG_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04060 NZ_CP006568.1 Protein Homology CDS 774722 775213 . - 0 ID=cds803;Parent=gene819;Dbxref=Genbank:WP_051419447.1;Name=WP_051419447.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419447.1;transl_table=11 NZ_CP006568.1 RefSeq gene 775415 775756 . + . ID=gene820;Name=SOPEG_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04065 NZ_CP006568.1 Protein Homology CDS 775415 775756 . + 0 ID=cds804;Parent=gene820;Dbxref=Genbank:WP_051419449.1;Name=WP_051419449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419449.1;transl_table=11 NZ_CP006568.1 RefSeq gene 776131 776715 . + . ID=gene821;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=SOPEG_RS04070;old_locus_tag=SOPEG_0774 NZ_CP006568.1 Protein Homology CDS 776131 776715 . + 0 ID=cds805;Parent=gene821;Dbxref=Genbank:WP_025244398.1;Name=WP_025244398.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_025244398.1;transl_table=11 NZ_CP006568.1 RefSeq gene 776749 777129 . + . ID=gene822;Name=SOPEG_RS04075;end_range=777129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04075;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 776749 777129 . + 0 ID=cds806;Parent=gene822;end_range=777129,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutamine amidotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 777119 778185 . + . ID=id116;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 777183 778106 . - . ID=gene823;Name=SOPEG_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04080;old_locus_tag=SOPEG_0776 NZ_CP006568.1 Protein Homology CDS 777183 778106 . - 0 ID=cds807;Parent=gene823;Dbxref=Genbank:WP_025244400.1;Name=WP_025244400.1;gbkey=CDS;product=transposase;protein_id=WP_025244400.1;transl_table=11 NZ_CP006568.1 RefSeq gene 778171 778395 . - . ID=gene824;Name=SOPEG_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04085 NZ_CP006568.1 Protein Homology CDS 778171 778395 . - 0 ID=cds808;Parent=gene824;Dbxref=Genbank:WP_025244401.1;Name=WP_025244401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244401.1;transl_table=11 NZ_CP006568.1 RefSeq gene 778442 779473 . - . ID=gene825;Name=SOPEG_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04090 NZ_CP006568.1 Protein Homology CDS 778442 779473 . - 0 ID=cds809;Parent=gene825;Dbxref=Genbank:WP_038468198.1;Name=WP_038468198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038468198.1;transl_table=11 NZ_CP006568.1 RefSeq gene 779509 781015 . - . ID=gene826;Name=SOPEG_RS04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04095;pseudo=true NZ_CP006568.1 Protein Homology CDS 779509 781015 . - 0 ID=cds810;Parent=gene826;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;exception=annotated by transcript or proteomic data;gbkey=CDS;product=D-ribose transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(780551..780553)%2Caa:Other),(pos:complement(780455..780457)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 781105 782167 . + . ID=id117;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 781184 782107 . + . ID=gene827;Name=SOPEG_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04100;old_locus_tag=SOPEG_0781 NZ_CP006568.1 Protein Homology CDS 781184 782107 . + 0 ID=cds811;Parent=gene827;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 782100 782840 . - . ID=gene828;Name=SOPEG_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22500 NZ_CP006568.1 Protein Homology CDS 782100 782840 . - 0 ID=cds812;Parent=gene828;Dbxref=Genbank:WP_051419451.1;Name=WP_051419451.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419451.1;transl_table=11 NZ_CP006568.1 RefSeq gene 782866 783525 . - . ID=gene829;Name=SOPEG_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22505 NZ_CP006568.1 Protein Homology CDS 782866 783525 . - 0 ID=cds813;Parent=gene829;Dbxref=Genbank:WP_051419453.1;Name=WP_051419453.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419453.1;transl_table=11 NZ_CP006568.1 RefSeq gene 783529 783792 . - . ID=gene830;Name=SOPEG_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04110 NZ_CP006568.1 Protein Homology CDS 783529 783792 . - 0 ID=cds814;Parent=gene830;Dbxref=Genbank:WP_025244403.1;Name=WP_025244403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244403.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 783750 786348 . + . ID=id118;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 783948 785465 . + . ID=gene831;Name=SOPEG_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04115;old_locus_tag=SOPEG_0783 NZ_CP006568.1 Protein Homology CDS 783948 785465 . + 0 ID=cds815;Parent=gene831;Dbxref=Genbank:WP_038468201.1;Name=WP_038468201.1;gbkey=CDS;product=transposase;protein_id=WP_038468201.1;transl_table=11 NZ_CP006568.1 RefSeq gene 785477 786226 . + . ID=gene832;Name=SOPEG_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04120;old_locus_tag=SOPEG_0784 NZ_CP006568.1 Protein Homology CDS 785477 786226 . + 0 ID=cds816;Parent=gene832;Dbxref=Genbank:WP_025244405.1;Name=WP_025244405.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244405.1;transl_table=11 NZ_CP006568.1 RefSeq gene 786339 787164 . - . ID=gene833;Name=SOPEG_RS04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04125;partial=true;pseudo=true;start_range=.,786339 NZ_CP006568.1 Protein Homology CDS 786339 787164 . - 0 ID=cds817;Parent=gene833;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=sulfurtransferase;pseudo=true;start_range=.,786339;transl_table=11 NZ_CP006568.1 RefSeq gene 787386 787790 . + . ID=gene834;Name=SOPEG_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04130 NZ_CP006568.1 Protein Homology CDS 787386 787790 . + 0 ID=cds818;Parent=gene834;Dbxref=Genbank:WP_025244406.1;Name=WP_025244406.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_025244406.1;transl_table=11 NZ_CP006568.1 RefSeq gene 787875 788881 . + . ID=gene835;Name=SOPEG_RS04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04135;pseudo=true NZ_CP006568.1 Protein Homology CDS 787875 788881 . + 0 ID=cds819;Parent=gene835;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 789199 789492 . + . ID=gene836;Name=SOPEG_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04140 NZ_CP006568.1 GeneMarkS+ CDS 789199 789492 . + 0 ID=cds820;Parent=gene836;Dbxref=Genbank:WP_025244407.1;Name=WP_025244407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244407.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 789516 791619 . + . ID=id119;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 789552 790535 . - . ID=gene837;Name=SOPEG_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04145 NZ_CP006568.1 Protein Homology CDS 789552 790535 . - 0 ID=cds821;Parent=gene837;Dbxref=Genbank:WP_038468204.1;Name=WP_038468204.1;gbkey=CDS;product=transposase;protein_id=WP_038468204.1;transl_table=11 NZ_CP006568.1 RefSeq gene 790507 790746 . - . ID=gene838;Name=SOPEG_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04150 NZ_CP006568.1 Protein Homology CDS 790507 790746 . - 0 ID=cds822;Parent=gene838;Dbxref=Genbank:WP_038468207.1;Name=WP_038468207.1;gbkey=CDS;product=transposase;protein_id=WP_038468207.1;transl_table=11 NZ_CP006568.1 RefSeq gene 791663 791926 . + . ID=gene839;Name=SOPEG_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04160 NZ_CP006568.1 Protein Homology CDS 791663 791926 . + 0 ID=cds823;Parent=gene839;Dbxref=Genbank:WP_051419455.1;Name=WP_051419455.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419455.1;transl_table=11 NZ_CP006568.1 RefSeq gene 792468 793142 . - . ID=gene840;Name=SOPEG_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04165 NZ_CP006568.1 Protein Homology CDS 792468 793142 . - 0 ID=cds824;Parent=gene840;Dbxref=Genbank:WP_025244409.1;Name=WP_025244409.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244409.1;transl_table=11 NZ_CP006568.1 RefSeq gene 793289 794443 . - . ID=gene841;Name=SOPEG_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04170 NZ_CP006568.1 Protein Homology CDS 793289 794443 . - 0 ID=cds825;Parent=gene841;Dbxref=Genbank:WP_025244410.1;Name=WP_025244410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244410.1;transl_table=11 NZ_CP006568.1 RefSeq gene 794513 795616 . + . ID=gene842;Name=SOPEG_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04175;pseudo=true NZ_CP006568.1 Protein Homology CDS 794513 795616 . + 0 ID=cds826;Parent=gene842;gbkey=CDS;product=gamma-glutamyl kinase;pseudo=true;transl_except=(pos:794603..794605%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 795797 796881 . + . ID=gene843;Name=SOPEG_RS04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04180;pseudo=true NZ_CP006568.1 Protein Homology CDS 795797 796881 . + 0 ID=cds827;Parent=gene843;exception=annotated by transcript or proteomic data;gbkey=CDS;product=gamma-glutamyl phosphate reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 797170 797245 . + . ID=gene844;Name=SOPEG_RS04185;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS04185;old_locus_tag=SOPEG_t0795 NZ_CP006568.1 tRNAscan-SE tRNA 797170 797245 . + . ID=rna16;Parent=gene844;anticodon=(pos:797203..797205);gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 tRNAscan-SE exon 797170 797245 . + . ID=id120;Parent=rna16;anticodon=(pos:797203..797205);gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 RefSeq repeat_region 797391 798711 . + . ID=id121;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 797466 798674 . + . ID=gene845;Name=SOPEG_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04190;old_locus_tag=SOPEG_0796 NZ_CP006568.1 Protein Homology CDS 797466 798674 . + 0 ID=cds828;Parent=gene845;Dbxref=Genbank:WP_025244411.1;Name=WP_025244411.1;gbkey=CDS;product=transposase;protein_id=WP_025244411.1;transl_table=11 NZ_CP006568.1 RefSeq gene 799132 799686 . - . ID=gene846;Name=SOPEG_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04195 NZ_CP006568.1 Protein Homology CDS 799132 799686 . - 0 ID=cds829;Parent=gene846;Dbxref=Genbank:WP_051419457.1;Name=WP_051419457.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419457.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 800312 801635 . + . ID=id122;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 800372 801559 . - . ID=gene847;Name=SOPEG_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04200 NZ_CP006568.1 Protein Homology CDS 800372 801559 . - 0 ID=cds830;Parent=gene847;Dbxref=Genbank:WP_025244412.1;Name=WP_025244412.1;gbkey=CDS;product=transposase;protein_id=WP_025244412.1;transl_table=11 NZ_CP006568.1 RefSeq gene 801629 802168 . - . ID=gene848;Name=SOPEG_RS04205;end_range=802168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04205;partial=true;pseudo=true;start_range=.,801629 NZ_CP006568.1 Protein Homology CDS 801629 802168 . - 0 ID=cds831;Parent=gene848;end_range=802168,.;gbkey=CDS;partial=true;product=Rha family transcriptional regulator;pseudo=true;start_range=.,801629;transl_except=(pos:complement(801884..801886)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 802168 803232 . + . ID=id123;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 802230 803153 . - . ID=gene849;Name=SOPEG_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04210;old_locus_tag=SOPEG_0800 NZ_CP006568.1 Protein Homology CDS 802230 803153 . - 0 ID=cds832;Parent=gene849;Dbxref=Genbank:WP_025244413.1;Name=WP_025244413.1;gbkey=CDS;product=transposase;protein_id=WP_025244413.1;transl_table=11 NZ_CP006568.1 RefSeq gene 803432 803788 . - . ID=gene850;Name=SOPEG_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04215;old_locus_tag=SOPEG_0801 NZ_CP006568.1 Protein Homology CDS 803432 803788 . - 0 ID=cds833;Parent=gene850;Dbxref=Genbank:WP_025244414.1;Name=WP_025244414.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244414.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 804067 805283 . + . ID=id124;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 804311 805168 . + . ID=gene851;Name=SOPEG_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04220 NZ_CP006568.1 Protein Homology CDS 804311 805168 . + 0 ID=cds834;Parent=gene851;Dbxref=Genbank:WP_038468210.1;Name=WP_038468210.1;gbkey=CDS;product=transposase;protein_id=WP_038468210.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 805313 807869 . + . ID=id125;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 805469 806986 . + . ID=gene852;Name=SOPEG_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04225;old_locus_tag=SOPEG_0803 NZ_CP006568.1 Protein Homology CDS 805469 806986 . + 0 ID=cds835;Parent=gene852;Dbxref=Genbank:WP_051419458.1;Name=WP_051419458.1;gbkey=CDS;product=transposase;protein_id=WP_051419458.1;transl_table=11 NZ_CP006568.1 RefSeq gene 806998 807747 . + . ID=gene853;Name=SOPEG_RS04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04230;pseudo=true NZ_CP006568.1 Protein Homology CDS 806998 807747 . + 0 ID=cds836;Parent=gene853;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:807334..807336%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 807828 808016 . + . ID=gene854;Name=SOPEG_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04235 NZ_CP006568.1 GeneMarkS+ CDS 807828 808016 . + 0 ID=cds837;Parent=gene854;Dbxref=Genbank:WP_025244417.1;Name=WP_025244417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244417.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 808584 809911 . + . ID=id126;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 808625 809833 . - . ID=gene855;Name=SOPEG_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04240;old_locus_tag=SOPEG_0805 NZ_CP006568.1 Protein Homology CDS 808625 809833 . - 0 ID=cds838;Parent=gene855;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 810130 810531 . - . ID=gene856;Name=SOPEG_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04245;old_locus_tag=SOPEG_0807 NZ_CP006568.1 Protein Homology CDS 810130 810531 . - 0 ID=cds839;Parent=gene856;Dbxref=Genbank:WP_025244418.1;Name=WP_025244418.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244418.1;transl_table=11 NZ_CP006568.1 RefSeq gene 810599 811844 . - . ID=gene857;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=pseudogene;locus_tag=SOPEG_RS04250;pseudo=true NZ_CP006568.1 Protein Homology CDS 810599 811844 . - 0 ID=cds840;Parent=gene857;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 812187 812645 . - . ID=gene858;Name=SOPEG_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04255;old_locus_tag=SOPEG_0809 NZ_CP006568.1 Protein Homology CDS 812187 812645 . - 0 ID=cds841;Parent=gene858;Dbxref=Genbank:WP_025244419.1;Name=WP_025244419.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine-guanine phosphoribosyltransferase;protein_id=WP_025244419.1;transl_table=11 NZ_CP006568.1 RefSeq gene 812874 814334 . + . ID=gene859;Name=SOPEG_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04260;old_locus_tag=SOPEG_0810 NZ_CP006568.1 Protein Homology CDS 812874 814334 . + 0 ID=cds842;Parent=gene859;Dbxref=Genbank:WP_025244420.1;Name=WP_025244420.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_025244420.1;transl_table=11 NZ_CP006568.1 RefSeq gene 814519 815574 . - . ID=gene860;Name=SOPEG_RS04265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04265;old_locus_tag=SOPEG_0811;partial=true;pseudo=true;start_range=.,814519 NZ_CP006568.1 Protein Homology CDS 814519 815574 . - 0 ID=cds843;Parent=gene860;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DNA polymerase IV;pseudo=true;start_range=.,814519;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 815597 818789 . + . ID=id127;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 815667 816506 . + . ID=gene861;Name=SOPEG_RS04270;end_range=816506,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04270;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 815667 816506 . + 0 ID=cds844;Parent=gene861;end_range=816506,.;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_except=(pos:815919..815921%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 816724 817473 . + . ID=gene862;Name=SOPEG_RS04275;end_range=817473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04275;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 816724 817473 . + 0 ID=cds845;Parent=gene862;end_range=817473,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 817545 818465 . + . ID=gene863;Name=SOPEG_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04280 NZ_CP006568.1 Protein Homology CDS 817545 818465 . + 0 ID=cds846;Parent=gene863;Dbxref=Genbank:WP_025244423.1;Name=WP_025244423.1;gbkey=CDS;product=transposase;protein_id=WP_025244423.1;transl_table=11 NZ_CP006568.1 RefSeq gene 818411 818752 . + . ID=gene864;Name=SOPEG_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04285 NZ_CP006568.1 Protein Homology CDS 818411 818752 . + 0 ID=cds847;Parent=gene864;Dbxref=Genbank:WP_025244424.1;Name=WP_025244424.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244424.1;transl_table=11 NZ_CP006568.1 RefSeq gene 818958 819718 . - . ID=gene865;Name=SOPEG_RS04290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04290;pseudo=true NZ_CP006568.1 Protein Homology CDS 818958 819718 . - 0 ID=cds848;Parent=gene865;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 819968 820621 . + . ID=gene866;Name=SOPEG_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04295;old_locus_tag=SOPEG_0816 NZ_CP006568.1 Protein Homology CDS 819968 820621 . + 0 ID=cds849;Parent=gene866;Dbxref=Genbank:WP_025244425.1;Name=WP_025244425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244425.1;transl_table=11 NZ_CP006568.1 RefSeq gene 821229 822125 . + . ID=gene867;Name=SOPEG_RS04300;end_range=822125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04300;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 821229 822125 . + 0 ID=cds850;Parent=gene867;end_range=822125,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 821475 825330 . + . ID=id128;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 822183 823106 . - . ID=gene868;Name=SOPEG_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04305;old_locus_tag=SOPEG_0818 NZ_CP006568.1 Protein Homology CDS 822183 823106 . - 0 ID=cds851;Parent=gene868;Dbxref=Genbank:WP_025244427.1;Name=WP_025244427.1;gbkey=CDS;product=transposase;protein_id=WP_025244427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 823133 823507 . + . ID=gene869;Name=SOPEG_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04310 NZ_CP006568.1 Protein Homology CDS 823133 823507 . + 0 ID=cds852;Parent=gene869;Dbxref=Genbank:WP_025244428.1;Name=WP_025244428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244428.1;transl_table=11 NZ_CP006568.1 RefSeq gene 823766 824620 . + . ID=gene870;Name=SOPEG_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22510 NZ_CP006568.1 Protein Homology CDS 823766 824620 . + 0 ID=cds853;Parent=gene870;Dbxref=Genbank:WP_051419460.1;Name=WP_051419460.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419460.1;transl_table=11 NZ_CP006568.1 RefSeq gene 824584 824775 . + . ID=gene871;Name=SOPEG_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22515 NZ_CP006568.1 GeneMarkS+ CDS 824584 824775 . + 0 ID=cds854;Parent=gene871;Dbxref=Genbank:WP_051419461.1;Name=WP_051419461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419461.1;transl_table=11 NZ_CP006568.1 RefSeq gene 824772 825314 . + . ID=gene872;Name=SOPEG_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22520 NZ_CP006568.1 Protein Homology CDS 824772 825314 . + 0 ID=cds855;Parent=gene872;Dbxref=Genbank:WP_051419463.1;Name=WP_051419463.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419463.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 825355 828414 . + . ID=id129;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 825540 826064 . + . ID=gene873;Name=SOPEG_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04320;old_locus_tag=SOPEG_0820 NZ_CP006568.1 Protein Homology CDS 825540 826064 . + 0 ID=cds856;Parent=gene873;Dbxref=Genbank:WP_025244429.1;Name=WP_025244429.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_025244429.1;transl_table=11 NZ_CP006568.1 RefSeq gene 826174 826365 . + . ID=gene874;Name=SOPEG_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04325;old_locus_tag=SOPEG_0821 NZ_CP006568.1 Protein Homology CDS 826174 826365 . + 0 ID=cds857;Parent=gene874;Dbxref=Genbank:WP_025244430.1;Name=WP_025244430.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244430.1;transl_table=11 NZ_CP006568.1 RefSeq gene 826720 827028 . + . ID=gene875;Name=SOPEG_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04330 NZ_CP006568.1 Protein Homology CDS 826720 827028 . + 0 ID=cds858;Parent=gene875;Dbxref=Genbank:WP_038468215.1;Name=WP_038468215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468215.1;transl_table=11 NZ_CP006568.1 RefSeq gene 827037 827318 . + . ID=gene876;Name=SOPEG_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04335 NZ_CP006568.1 Protein Homology CDS 827037 827318 . + 0 ID=cds859;Parent=gene876;Dbxref=Genbank:WP_038468218.1;Name=WP_038468218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468218.1;transl_table=11 NZ_CP006568.1 RefSeq gene 827431 827728 . + . ID=gene877;Name=SOPEG_RS04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04340;pseudo=true NZ_CP006568.1 Protein Homology CDS 827431 827728 . + 0 ID=cds860;Parent=gene877;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 827957 828907 . - . ID=gene878;Name=SOPEG_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04345;old_locus_tag=SOPEG_0824 NZ_CP006568.1 Protein Homology CDS 827957 828907 . - 0 ID=cds861;Parent=gene878;Dbxref=Genbank:WP_025244433.1;Name=WP_025244433.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination associated protein;protein_id=WP_025244433.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 828444 840910 . + . ID=id130;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 829536 829934 . + . ID=gene879;Name=SOPEG_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04350 NZ_CP006568.1 Protein Homology CDS 829536 829934 . + 0 ID=cds862;Parent=gene879;Dbxref=Genbank:WP_038468220.1;Name=WP_038468220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468220.1;transl_table=11 NZ_CP006568.1 RefSeq gene 829974 830294 . + . ID=gene880;Name=SOPEG_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04355 NZ_CP006568.1 Protein Homology CDS 829974 830294 . + 0 ID=cds863;Parent=gene880;Dbxref=Genbank:WP_038468223.1;Name=WP_038468223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468223.1;transl_table=11 NZ_CP006568.1 RefSeq gene 830487 831380 . + . ID=gene881;Name=SOPEG_RS04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04360;pseudo=true NZ_CP006568.1 Protein Homology CDS 830487 831380 . + 0 ID=cds864;Parent=gene881;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fructokinase;pseudo=true;transl_except=(pos:831179..831181%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 831667 832281 . - . ID=gene882;Name=SOPEG_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22525 NZ_CP006568.1 GeneMarkS+ CDS 831667 832281 . - 0 ID=cds865;Parent=gene882;Dbxref=Genbank:WP_051419465.1;Name=WP_051419465.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419465.1;transl_table=11 NZ_CP006568.1 RefSeq gene 832227 833954 . - . ID=gene883;Name=SOPEG_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22530 NZ_CP006568.1 Protein Homology CDS 832227 833954 . - 0 ID=cds866;Parent=gene883;Dbxref=Genbank:WP_051419467.1;Name=WP_051419467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419467.1;transl_table=11 NZ_CP006568.1 RefSeq gene 834342 835256 . - . ID=gene884;Name=SOPEG_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22535 NZ_CP006568.1 Protein Homology CDS 834342 835256 . - 0 ID=cds867;Parent=gene884;Dbxref=Genbank:WP_051419473.1;Name=WP_051419473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419473.1;transl_table=11 NZ_CP006568.1 RefSeq gene 835253 835882 . - . ID=gene885;Name=SOPEG_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22540 NZ_CP006568.1 Protein Homology CDS 835253 835882 . - 0 ID=cds868;Parent=gene885;Dbxref=Genbank:WP_051419475.1;Name=WP_051419475.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419475.1;transl_table=11 NZ_CP006568.1 RefSeq gene 836023 836280 . - . ID=gene886;Name=SOPEG_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22545 NZ_CP006568.1 Protein Homology CDS 836023 836280 . - 0 ID=cds869;Parent=gene886;Dbxref=Genbank:WP_051419477.1;Name=WP_051419477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419477.1;transl_table=11 NZ_CP006568.1 RefSeq gene 836836 838071 . + . ID=gene887;Name=SOPEG_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04375 NZ_CP006568.1 Protein Homology CDS 836836 838071 . + 0 ID=cds870;Parent=gene887;Dbxref=Genbank:WP_051419995.1;Name=WP_051419995.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419995.1;transl_table=11 NZ_CP006568.1 RefSeq gene 838083 838832 . + . ID=gene888;Name=SOPEG_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04380;old_locus_tag=SOPEG_0830 NZ_CP006568.1 Protein Homology CDS 838083 838832 . + 0 ID=cds871;Parent=gene888;Dbxref=Genbank:WP_025244436.1;Name=WP_025244436.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244436.1;transl_table=11 NZ_CP006568.1 RefSeq gene 838870 839085 . - . ID=gene889;Name=SOPEG_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04385 NZ_CP006568.1 GeneMarkS+ CDS 838870 839085 . - 0 ID=cds872;Parent=gene889;Dbxref=Genbank:WP_025244437.1;Name=WP_025244437.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244437.1;transl_table=11 NZ_CP006568.1 RefSeq gene 839665 840873 . + . ID=gene890;Name=SOPEG_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04390;old_locus_tag=SOPEG_0832 NZ_CP006568.1 Protein Homology CDS 839665 840873 . + 0 ID=cds873;Parent=gene890;Dbxref=Genbank:WP_025244438.1;Name=WP_025244438.1;gbkey=CDS;product=transposase;protein_id=WP_025244438.1;transl_table=11 NZ_CP006568.1 RefSeq gene 840907 841322 . + . ID=gene891;Name=SOPEG_RS04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04395;partial=true;pseudo=true;start_range=.,840907 NZ_CP006568.1 Protein Homology CDS 840907 841322 . + 0 ID=cds874;Parent=gene891;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transcriptional regulator PhoB;pseudo=true;start_range=.,840907;transl_table=11 NZ_CP006568.1 RefSeq gene 841525 842778 . + . ID=gene892;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=SOPEG_RS04400;old_locus_tag=SOPEG_0833 NZ_CP006568.1 Protein Homology CDS 841525 842778 . + 0 ID=cds875;Parent=gene892;Dbxref=Genbank:WP_025244439.1;Name=WP_025244439.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_025244439.1;transl_table=11 NZ_CP006568.1 RefSeq gene 842778 842969 . + . ID=gene893;Name=SOPEG_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04405 NZ_CP006568.1 GeneMarkS+ CDS 842778 842969 . + 0 ID=cds876;Parent=gene893;Dbxref=Genbank:WP_038468226.1;Name=WP_038468226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468226.1;transl_table=11 NZ_CP006568.1 RefSeq gene 843139 843645 . + . ID=gene894;Name=SOPEG_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04410 NZ_CP006568.1 Protein Homology CDS 843139 843645 . + 0 ID=cds877;Parent=gene894;Dbxref=Genbank:WP_051419478.1;Name=WP_051419478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419478.1;transl_table=11 NZ_CP006568.1 RefSeq gene 843869 844972 . + . ID=gene895;Name=SOPEG_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04415;old_locus_tag=SOPEG_0835 NZ_CP006568.1 Protein Homology CDS 843869 844972 . + 0 ID=cds878;Parent=gene895;Dbxref=Genbank:WP_025244440.1;Name=WP_025244440.1;gbkey=CDS;product=methionine synthase;protein_id=WP_025244440.1;transl_table=11 NZ_CP006568.1 RefSeq gene 845702 847018 . + . ID=gene896;Name=SOPEG_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04420;old_locus_tag=SOPEG_0836 NZ_CP006568.1 Protein Homology CDS 845702 847018 . + 0 ID=cds879;Parent=gene896;Dbxref=Genbank:WP_025244441.1;Name=WP_025244441.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_025244441.1;transl_table=11 NZ_CP006568.1 RefSeq gene 847093 847651 . + . ID=gene897;Name=proY;end_range=847651,.;gbkey=Gene;gene=proY;gene_biotype=pseudogene;locus_tag=SOPEG_RS04425;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 847093 847651 . + 0 ID=cds880;Parent=gene897;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;end_range=847651,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=proY;partial=true;product=proline-specific permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 847760 848605 . + . ID=gene898;Name=proY;gbkey=Gene;gene=proY;gene_biotype=pseudogene;locus_tag=SOPEG_RS04430;partial=true;pseudo=true;start_range=.,847760 NZ_CP006568.1 Protein Homology CDS 847760 848605 . + 0 ID=cds881;Parent=gene898;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;exception=unextendable partial coding region;gbkey=CDS;gene=proY;partial=true;product=proline-specific permease;pseudo=true;start_range=.,847760;transl_table=11 NZ_CP006568.1 RefSeq gene 848756 849358 . - . ID=gene899;Name=SOPEG_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04435;old_locus_tag=SOPEG_0838 NZ_CP006568.1 Protein Homology CDS 848756 849358 . - 0 ID=cds882;Parent=gene899;Dbxref=Genbank:WP_025244442.1;Name=WP_025244442.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_025244442.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 850325 851386 . + . ID=id131;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 850403 851326 . + . ID=gene900;Name=SOPEG_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04440;old_locus_tag=SOPEG_0839 NZ_CP006568.1 Protein Homology CDS 850403 851326 . + 0 ID=cds883;Parent=gene900;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 852164 853225 . + . ID=id132;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 852224 853147 . - . ID=gene901;Name=SOPEG_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04445;old_locus_tag=SOPEG_0840 NZ_CP006568.1 Protein Homology CDS 852224 853147 . - 0 ID=cds884;Parent=gene901;Dbxref=Genbank:WP_025244443.1;Name=WP_025244443.1;gbkey=CDS;product=transposase;protein_id=WP_025244443.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 853273 854595 . + . ID=id133;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 853333 854520 . - . ID=gene902;Name=SOPEG_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04450 NZ_CP006568.1 Protein Homology CDS 853333 854520 . - 0 ID=cds885;Parent=gene902;Dbxref=Genbank:WP_051419481.1;Name=WP_051419481.1;gbkey=CDS;product=transposase;protein_id=WP_051419481.1;transl_table=11 NZ_CP006568.1 RefSeq gene 854593 854979 . - . ID=gene903;Name=SOPEG_RS04455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04455;partial=true;pseudo=true;start_range=.,854593 NZ_CP006568.1 Protein Homology CDS 854593 854979 . - 0 ID=cds886;Parent=gene903;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,854593;transl_table=11 NZ_CP006568.1 RefSeq gene 855082 856109 . + . ID=gene904;Name=SOPEG_RS04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04460;pseudo=true NZ_CP006568.1 Protein Homology CDS 855082 856109 . + 0 ID=cds887;Parent=gene904;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 856373 856798 . - . ID=gene905;Name=SOPEG_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04465 NZ_CP006568.1 Protein Homology CDS 856373 856798 . - 0 ID=cds888;Parent=gene905;Dbxref=Genbank:WP_025244445.1;Name=WP_025244445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244445.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 856815 858542 . + . ID=id134;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 857251 858471 . - . ID=gene906;Name=SOPEG_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04470;old_locus_tag=SOPEG_0846 NZ_CP006568.1 Protein Homology CDS 857251 858471 . - 0 ID=cds889;Parent=gene906;Dbxref=Genbank:WP_025244446.1;Name=WP_025244446.1;gbkey=CDS;product=transposase;protein_id=WP_025244446.1;transl_table=11 NZ_CP006568.1 RefSeq gene 858569 859370 . + . ID=gene907;Name=SOPEG_RS04475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04475;pseudo=true NZ_CP006568.1 Protein Homology CDS 858569 859370 . + 0 ID=cds890;Parent=gene907;Note=3' incision activity%3B acts with UvrC;exception=annotated by transcript or proteomic data;gbkey=CDS;product=endonuclease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 860278 861216 . - . ID=gene908;Name=SOPEG_RS04480;end_range=861216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04480;partial=true;pseudo=true;start_range=.,860278 NZ_CP006568.1 Protein Homology CDS 860278 861216 . - 0 ID=cds891;Parent=gene908;end_range=861216,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=aminopeptidase;pseudo=true;start_range=.,860278;transl_table=11 NZ_CP006568.1 RefSeq gene 861238 861558 . - . ID=gene909;Name=SOPEG_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04485 NZ_CP006568.1 Protein Homology CDS 861238 861558 . - 0 ID=cds892;Parent=gene909;Dbxref=Genbank:WP_025244448.1;Name=WP_025244448.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244448.1;transl_table=11 NZ_CP006568.1 RefSeq gene 861576 862564 . - . ID=gene910;Name=SOPEG_RS04490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04490;pseudo=true NZ_CP006568.1 Protein Homology CDS 861576 862564 . - 0 ID=cds893;Parent=gene910;exception=annotated by transcript or proteomic data;gbkey=CDS;product=EBNA-1 nuclear protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 862770 863162 . + . ID=gene911;Name=SOPEG_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22550;old_locus_tag=SOPEG_ps0851 NZ_CP006568.1 Protein Homology CDS 862770 863162 . + 0 ID=cds894;Parent=gene911;Dbxref=Genbank:WP_025244449.1;Name=WP_025244449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244449.1;transl_table=11 NZ_CP006568.1 RefSeq gene 863140 863652 . - . ID=gene912;Name=SOPEG_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04500;old_locus_tag=SOPEG_0852 NZ_CP006568.1 Protein Homology CDS 863140 863652 . - 0 ID=cds895;Parent=gene912;Dbxref=Genbank:WP_025244450.1;Name=WP_025244450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244450.1;transl_table=11 NZ_CP006568.1 RefSeq gene 863768 864460 . - . ID=gene913;Name=SOPEG_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04505 NZ_CP006568.1 Protein Homology CDS 863768 864460 . - 0 ID=cds896;Parent=gene913;Dbxref=Genbank:WP_025244451.1;Name=WP_025244451.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244451.1;transl_table=11 NZ_CP006568.1 RefSeq gene 864558 865503 . + . ID=gene914;Name=SOPEG_RS04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04510;pseudo=true NZ_CP006568.1 Protein Homology CDS 864558 865503 . + 0 ID=cds897;Parent=gene914;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 865734 866063 . + . ID=gene915;Name=SOPEG_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04515;old_locus_tag=SOPEG_0855 NZ_CP006568.1 Protein Homology CDS 865734 866063 . + 0 ID=cds898;Parent=gene915;Dbxref=Genbank:WP_025244452.1;Name=WP_025244452.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_025244452.1;transl_table=11 NZ_CP006568.1 RefSeq gene 866107 866670 . + . ID=gene916;Name=SOPEG_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04520;old_locus_tag=SOPEG_0856 NZ_CP006568.1 Protein Homology CDS 866107 866670 . + 0 ID=cds899;Parent=gene916;Dbxref=Genbank:WP_025244453.1;Name=WP_025244453.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine acetyltransferase;protein_id=WP_025244453.1;transl_table=11 NZ_CP006568.1 RefSeq gene 866769 867641 . - . ID=gene917;Name=SOPEG_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04525;old_locus_tag=SOPEG_0857 NZ_CP006568.1 Protein Homology CDS 866769 867641 . - 0 ID=cds900;Parent=gene917;Dbxref=Genbank:WP_025244454.1;Name=WP_025244454.1;Note=receptor of phage T6 and colicin K%3B involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244454.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 867934 868995 . + . ID=id135;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 868013 868936 . + . ID=gene918;Name=SOPEG_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04530;old_locus_tag=SOPEG_0858 NZ_CP006568.1 Protein Homology CDS 868013 868936 . + 0 ID=cds901;Parent=gene918;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 869560 870405 . + . ID=gene919;Name=SOPEG_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04535 NZ_CP006568.1 Protein Homology CDS 869560 870405 . + 0 ID=cds902;Parent=gene919;Dbxref=Genbank:WP_025244455.1;Name=WP_025244455.1;gbkey=CDS;product=methionine synthase;protein_id=WP_025244455.1;transl_table=11 NZ_CP006568.1 RefSeq gene 870638 872695 . - . ID=gene920;Name=SOPEG_RS04540;end_range=872695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04540;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 870638 872695 . - 0 ID=cds903;Parent=gene920;end_range=872695,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glycogen debranching protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 872697 874030 . + . ID=id136;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 872736 873944 . - . ID=gene921;Name=SOPEG_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04545;old_locus_tag=SOPEG_0861 NZ_CP006568.1 Protein Homology CDS 872736 873944 . - 0 ID=cds904;Parent=gene921;Dbxref=Genbank:WP_025244457.1;Name=WP_025244457.1;gbkey=CDS;product=transposase;protein_id=WP_025244457.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 874756 879834 . + . ID=id137;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 874878 875627 . - . ID=gene922;Name=SOPEG_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04550;old_locus_tag=SOPEG_0862 NZ_CP006568.1 Protein Homology CDS 874878 875627 . - 0 ID=cds905;Parent=gene922;Dbxref=Genbank:WP_025244458.1;Name=WP_025244458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244458.1;transl_table=11 NZ_CP006568.1 RefSeq gene 875639 877156 . - . ID=gene923;Name=SOPEG_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04555;old_locus_tag=SOPEG_0863 NZ_CP006568.1 Protein Homology CDS 875639 877156 . - 0 ID=cds906;Parent=gene923;Dbxref=Genbank:WP_025244459.1;Name=WP_025244459.1;gbkey=CDS;product=transposase;protein_id=WP_025244459.1;transl_table=11 NZ_CP006568.1 RefSeq gene 877206 877616 . - . ID=gene924;Name=SOPEG_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04560 NZ_CP006568.1 Protein Homology CDS 877206 877616 . - 0 ID=cds907;Parent=gene924;Dbxref=Genbank:WP_025244460.1;Name=WP_025244460.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244460.1;transl_table=11 NZ_CP006568.1 RefSeq gene 877653 878141 . - . ID=gene925;Name=SOPEG_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04565 NZ_CP006568.1 Protein Homology CDS 877653 878141 . - 0 ID=cds908;Parent=gene925;Dbxref=Genbank:WP_038468231.1;Name=WP_038468231.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468231.1;transl_table=11 NZ_CP006568.1 RefSeq gene 878151 878483 . - . ID=gene926;Name=SOPEG_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04570 NZ_CP006568.1 Protein Homology CDS 878151 878483 . - 0 ID=cds909;Parent=gene926;Dbxref=Genbank:WP_038468234.1;Name=WP_038468234.1;gbkey=CDS;product=transposase;protein_id=WP_038468234.1;transl_table=11 NZ_CP006568.1 RefSeq gene 878523 879758 . - . ID=gene927;Name=SOPEG_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04575 NZ_CP006568.1 Protein Homology CDS 878523 879758 . - 0 ID=cds910;Parent=gene927;Dbxref=Genbank:WP_025244461.1;Name=WP_025244461.1;gbkey=CDS;product=transposase;protein_id=WP_025244461.1;transl_table=11 NZ_CP006568.1 RefSeq gene 879956 880237 . + . ID=gene928;Name=SOPEG_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04580 NZ_CP006568.1 GeneMarkS+ CDS 879956 880237 . + 0 ID=cds911;Parent=gene928;Dbxref=Genbank:WP_038468237.1;Name=WP_038468237.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468237.1;transl_table=11 NZ_CP006568.1 RefSeq gene 880670 881311 . + . ID=gene929;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SOPEG_RS04585;old_locus_tag=SOPEG_0866 NZ_CP006568.1 Protein Homology CDS 880670 881311 . + 0 ID=cds912;Parent=gene929;Dbxref=Genbank:WP_025244464.1;Name=WP_025244464.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_025244464.1;transl_table=11 NZ_CP006568.1 RefSeq gene 881388 881984 . - . ID=gene930;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=SOPEG_RS04590;old_locus_tag=SOPEG_0867 NZ_CP006568.1 Protein Homology CDS 881388 881984 . - 0 ID=cds913;Parent=gene930;Dbxref=Genbank:WP_025244465.1;Name=WP_025244465.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_025244465.1;transl_table=11 NZ_CP006568.1 RefSeq gene 882113 882571 . - . ID=gene931;Name=SOPEG_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04595;old_locus_tag=SOPEG_0868 NZ_CP006568.1 Protein Homology CDS 882113 882571 . - 0 ID=cds914;Parent=gene931;Dbxref=Genbank:WP_025244466.1;Name=WP_025244466.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_025244466.1;transl_table=11 NZ_CP006568.1 RefSeq gene 882549 883763 . - . ID=gene932;Name=SOPEG_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04600;old_locus_tag=SOPEG_0869 NZ_CP006568.1 Protein Homology CDS 882549 883763 . - 0 ID=cds915;Parent=gene932;Dbxref=Genbank:WP_025244467.1;Name=WP_025244467.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_025244467.1;transl_table=11 NZ_CP006568.1 RefSeq gene 884137 884556 . + . ID=gene933;Name=SOPEG_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04605 NZ_CP006568.1 Protein Homology CDS 884137 884556 . + 0 ID=cds916;Parent=gene933;Dbxref=Genbank:WP_051419483.1;Name=WP_051419483.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419483.1;transl_table=11 NZ_CP006568.1 RefSeq gene 884798 885040 . + . ID=gene934;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SOPEG_RS04610;old_locus_tag=SOPEG_0871 NZ_CP006568.1 Protein Homology CDS 884798 885040 . + 0 ID=cds917;Parent=gene934;Dbxref=Genbank:WP_025244468.1;Name=WP_025244468.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_025244468.1;transl_table=11 NZ_CP006568.1 RefSeq gene 885052 885219 . + . ID=gene935;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SOPEG_RS04615;old_locus_tag=SOPEG_0872 NZ_CP006568.1 Protein Homology CDS 885052 885219 . + 0 ID=cds918;Parent=gene935;Dbxref=Genbank:WP_011412018.1;Name=WP_011412018.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_011412018.1;transl_table=11 NZ_CP006568.1 RefSeq gene 885322 886131 . + . ID=gene936;Name=SOPEG_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04620;old_locus_tag=SOPEG_0873 NZ_CP006568.1 Protein Homology CDS 885322 886131 . + 0 ID=cds919;Parent=gene936;Dbxref=Genbank:WP_025244469.1;Name=WP_025244469.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_025244469.1;transl_table=11 NZ_CP006568.1 RefSeq gene 886183 886665 . - . ID=gene937;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SOPEG_RS04625;old_locus_tag=SOPEG_0874 NZ_CP006568.1 Protein Homology CDS 886183 886665 . - 0 ID=cds920;Parent=gene937;Dbxref=Genbank:WP_025244470.1;Name=WP_025244470.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=WP_025244470.1;transl_table=11 NZ_CP006568.1 RefSeq gene 886662 887441 . - . ID=gene938;Name=SOPEG_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04630;old_locus_tag=SOPEG_0875 NZ_CP006568.1 Protein Homology CDS 886662 887441 . - 0 ID=cds921;Parent=gene938;Dbxref=Genbank:WP_025244471.1;Name=WP_025244471.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_025244471.1;transl_table=11 NZ_CP006568.1 RefSeq gene 887464 888717 . - . ID=gene939;Name=SOPEG_RS04635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04635;partial=true;pseudo=true;start_range=.,887464 NZ_CP006568.1 Protein Homology CDS 887464 888717 . - 0 ID=cds922;Parent=gene939;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-deoxy-D-manno-octulosonic acid transferase;pseudo=true;start_range=.,887464;transl_table=11 NZ_CP006568.1 RefSeq gene 888905 890032 . - . ID=gene940;Name=SOPEG_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04640;old_locus_tag=SOPEG_0877 NZ_CP006568.1 Protein Homology CDS 888905 890032 . - 0 ID=cds923;Parent=gene940;Dbxref=Genbank:WP_025244473.1;Name=WP_025244473.1;gbkey=CDS;product=glycosyl transferase family 1;protein_id=WP_025244473.1;transl_table=11 NZ_CP006568.1 RefSeq gene 890145 891198 . - . ID=gene941;Name=SOPEG_RS04645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04645;pseudo=true NZ_CP006568.1 Protein Homology CDS 890145 891198 . - 0 ID=cds924;Parent=gene941;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl transferase family 9;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 891452 894047 . + . ID=id138;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 891624 893087 . + . ID=gene942;Name=SOPEG_RS04650;end_range=893087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04650;old_locus_tag=SOPEG_0879;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 891624 893087 . + 0 ID=cds925;Parent=gene942;end_range=893087,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 893174 893923 . + . ID=gene943;Name=SOPEG_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04660 NZ_CP006568.1 Protein Homology CDS 893174 893923 . + 0 ID=cds926;Parent=gene943;Dbxref=Genbank:WP_025244475.1;Name=WP_025244475.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244475.1;transl_table=11 NZ_CP006568.1 RefSeq gene 894365 895339 . - . ID=gene944;Name=SOPEG_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04665;old_locus_tag=SOPEG_0881 NZ_CP006568.1 Protein Homology CDS 894365 895339 . - 0 ID=cds927;Parent=gene944;Dbxref=Genbank:WP_038469605.1;Name=WP_038469605.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_038469605.1;transl_table=11 NZ_CP006568.1 RefSeq gene 895392 896495 . - . ID=gene945;Name=SOPEG_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04670;old_locus_tag=SOPEG_0882 NZ_CP006568.1 Protein Homology CDS 895392 896495 . - 0 ID=cds928;Parent=gene945;Dbxref=Genbank:WP_025244477.1;Name=WP_025244477.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_025244477.1;transl_table=11 NZ_CP006568.1 RefSeq gene 896707 897512 . + . ID=gene946;Name=SOPEG_RS04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04675;pseudo=true NZ_CP006568.1 Protein Homology CDS 896707 897512 . + 0 ID=cds929;Parent=gene946;exception=annotated by transcript or proteomic data;gbkey=CDS;product=deacetylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 897476 898678 . - . ID=gene947;Name=SOPEG_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04680;old_locus_tag=SOPEG_0884 NZ_CP006568.1 Protein Homology CDS 897476 898678 . - 0 ID=cds930;Parent=gene947;Dbxref=Genbank:WP_025244478.1;Name=WP_025244478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244478.1;transl_table=11 NZ_CP006568.1 RefSeq gene 898659 899567 . - . ID=gene948;Name=SOPEG_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04685;old_locus_tag=SOPEG_0885 NZ_CP006568.1 Protein Homology CDS 898659 899567 . - 0 ID=cds931;Parent=gene948;Dbxref=Genbank:WP_025244479.1;Name=WP_025244479.1;gbkey=CDS;product=sugar glycosyltransferase;protein_id=WP_025244479.1;transl_table=11 NZ_CP006568.1 RefSeq gene 899622 900740 . - . ID=gene949;Name=SOPEG_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04690;pseudo=true NZ_CP006568.1 Protein Homology CDS 899622 900740 . - 0 ID=cds932;Parent=gene949;gbkey=CDS;product=glycosyltransferase;pseudo=true;transl_except=(pos:complement(900102..900104)%2Caa:Other),(pos:complement(899919..899921)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 900747 901721 . - . ID=gene950;Name=SOPEG_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04695;old_locus_tag=SOPEG_0887 NZ_CP006568.1 Protein Homology CDS 900747 901721 . - 0 ID=cds933;Parent=gene950;Dbxref=Genbank:WP_025244480.1;Name=WP_025244480.1;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase;protein_id=WP_025244480.1;transl_table=11 NZ_CP006568.1 RefSeq gene 901733 902770 . - . ID=gene951;Name=SOPEG_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04700;old_locus_tag=SOPEG_0888 NZ_CP006568.1 Protein Homology CDS 901733 902770 . - 0 ID=cds934;Parent=gene951;Dbxref=Genbank:WP_038468248.1;Name=WP_038468248.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase;protein_id=WP_038468248.1;transl_table=11 NZ_CP006568.1 RefSeq gene 902802 903722 . - . ID=gene952;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=SOPEG_RS04705;old_locus_tag=SOPEG_0889 NZ_CP006568.1 Protein Homology CDS 902802 903722 . - 0 ID=cds935;Parent=gene952;Dbxref=Genbank:WP_025244481.1;Name=WP_025244481.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_025244481.1;transl_table=11 NZ_CP006568.1 RefSeq gene 903805 904746 . - . ID=gene953;Name=SOPEG_RS04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04710;pseudo=true NZ_CP006568.1 Protein Homology CDS 903805 904746 . - 0 ID=cds936;Parent=gene953;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(904180..904182)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 904755 905972 . - . ID=gene954;Name=SOPEG_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04715;old_locus_tag=SOPEG_0891 NZ_CP006568.1 Protein Homology CDS 904755 905972 . - 0 ID=cds937;Parent=gene954;Dbxref=Genbank:WP_025244482.1;Name=WP_025244482.1;gbkey=CDS;product=glycosyl transferase family 1;protein_id=WP_025244482.1;transl_table=11 NZ_CP006568.1 RefSeq gene 906250 907222 . - . ID=gene955;Name=SOPEG_RS04720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04720;pseudo=true NZ_CP006568.1 Protein Homology CDS 906250 907222 . - 0 ID=cds938;Parent=gene955;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 907224 908462 . - . ID=gene956;Name=SOPEG_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04725;old_locus_tag=SOPEG_0893 NZ_CP006568.1 Protein Homology CDS 907224 908462 . - 0 ID=cds939;Parent=gene956;Dbxref=Genbank:WP_051419486.1;Name=WP_051419486.1;gbkey=CDS;product=peptidase M37;protein_id=WP_051419486.1;transl_table=11 NZ_CP006568.1 RefSeq gene 908707 909138 . + . ID=gene957;Name=SOPEG_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04730;old_locus_tag=SOPEG_0894 NZ_CP006568.1 Protein Homology CDS 908707 909138 . + 0 ID=cds940;Parent=gene957;Dbxref=Genbank:WP_025244484.1;Name=WP_025244484.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244484.1;transl_table=11 NZ_CP006568.1 RefSeq gene 909166 909414 . + . ID=gene958;Name=SOPEG_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04735;old_locus_tag=SOPEG_0895 NZ_CP006568.1 Protein Homology CDS 909166 909414 . + 0 ID=cds941;Parent=gene958;Dbxref=Genbank:WP_025244485.1;Name=WP_025244485.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_025244485.1;transl_table=11 NZ_CP006568.1 RefSeq gene 909482 909952 . + . ID=gene959;Name=SOPEG_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04740;old_locus_tag=SOPEG_0896 NZ_CP006568.1 Protein Homology CDS 909482 909952 . + 0 ID=cds942;Parent=gene959;Dbxref=Genbank:WP_025244486.1;Name=WP_025244486.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=preprotein translocase subunit SecB;protein_id=WP_025244486.1;transl_table=11 NZ_CP006568.1 RefSeq gene 909955 910971 . + . ID=gene960;Name=SOPEG_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04745;old_locus_tag=SOPEG_0897 NZ_CP006568.1 Protein Homology CDS 909955 910971 . + 0 ID=cds943;Parent=gene960;Dbxref=Genbank:WP_038468251.1;Name=WP_038468251.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_038468251.1;transl_table=11 NZ_CP006568.1 RefSeq gene 911010 911825 . + . ID=gene961;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SOPEG_RS04750;old_locus_tag=SOPEG_0898 NZ_CP006568.1 Protein Homology CDS 911010 911825 . + 0 ID=cds944;Parent=gene961;Dbxref=Genbank:WP_025244488.1;Name=WP_025244488.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_025244488.1;transl_table=11 NZ_CP006568.1 RefSeq gene 911832 912293 . - . ID=gene962;Name=SOPEG_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04755;old_locus_tag=SOPEG_0899 NZ_CP006568.1 Protein Homology CDS 911832 912293 . - 0 ID=cds945;Parent=gene962;Dbxref=Genbank:WP_025244489.1;Name=WP_025244489.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=rRNA methylase;protein_id=WP_025244489.1;transl_table=11 NZ_CP006568.1 RefSeq gene 912491 913864 . - . ID=gene963;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=SOPEG_RS04760;old_locus_tag=SOPEG_0900 NZ_CP006568.1 Protein Homology CDS 912491 913864 . - 0 ID=cds946;Parent=gene963;Dbxref=Genbank:WP_025244490.1;Name=WP_025244490.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_025244490.1;transl_table=11 NZ_CP006568.1 RefSeq gene 913861 914559 . - . ID=gene964;Name=SOPEG_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04765;old_locus_tag=SOPEG_0901 NZ_CP006568.1 Protein Homology CDS 913861 914559 . - 0 ID=cds947;Parent=gene964;Dbxref=Genbank:WP_025244491.1;Name=WP_025244491.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_025244491.1;transl_table=11 NZ_CP006568.1 RefSeq gene 914709 915197 . + . ID=gene965;Name=SOPEG_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04770;old_locus_tag=SOPEG_0902 NZ_CP006568.1 Protein Homology CDS 914709 915197 . + 0 ID=cds948;Parent=gene965;Dbxref=Genbank:WP_025244492.1;Name=WP_025244492.1;gbkey=CDS;product=universal stress protein;protein_id=WP_025244492.1;transl_table=11 NZ_CP006568.1 RefSeq gene 915525 915953 . - . ID=gene966;Name=SOPEG_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04775;old_locus_tag=SOPEG_0903 NZ_CP006568.1 Protein Homology CDS 915525 915953 . - 0 ID=cds949;Parent=gene966;Dbxref=Genbank:WP_025244493.1;Name=WP_025244493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244493.1;transl_table=11 NZ_CP006568.1 RefSeq gene 915965 916533 . - . ID=gene967;Name=SOPEG_RS04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04780;old_locus_tag=SOPEG_0904;pseudo=true NZ_CP006568.1 Protein Homology CDS 915965 916533 . - 0 ID=cds950;Parent=gene967;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 917081 917269 . + . ID=gene968;Name=SOPEG_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04785 NZ_CP006568.1 GeneMarkS+ CDS 917081 917269 . + 0 ID=cds951;Parent=gene968;Dbxref=Genbank:WP_038468254.1;Name=WP_038468254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468254.1;transl_table=11 NZ_CP006568.1 RefSeq gene 917379 917573 . - . ID=gene969;Name=SOPEG_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04790 NZ_CP006568.1 GeneMarkS+ CDS 917379 917573 . - 0 ID=cds952;Parent=gene969;Dbxref=Genbank:WP_025244495.1;Name=WP_025244495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244495.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 918054 919118 . + . ID=id139;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 918134 919057 . + . ID=gene970;Name=SOPEG_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04795;old_locus_tag=SOPEG_0906 NZ_CP006568.1 Protein Homology CDS 918134 919057 . + 0 ID=cds953;Parent=gene970;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 919283 919579 . - . ID=gene971;Name=SOPEG_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04800 NZ_CP006568.1 GeneMarkS+ CDS 919283 919579 . - 0 ID=cds954;Parent=gene971;Dbxref=Genbank:WP_025244496.1;Name=WP_025244496.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244496.1;transl_table=11 NZ_CP006568.1 RefSeq gene 919597 920460 . + . ID=gene972;Name=SOPEG_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04805;pseudo=true NZ_CP006568.1 Protein Homology CDS 919597 920460 . + 0 ID=cds955;Parent=gene972;gbkey=CDS;product=phosphoenolpyruvate phosphomutase;pseudo=true;transl_except=(pos:920341..920343%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 920540 920938 . - . ID=gene973;Name=SOPEG_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04810;old_locus_tag=SOPEG_0908 NZ_CP006568.1 Protein Homology CDS 920540 920938 . - 0 ID=cds956;Parent=gene973;Dbxref=Genbank:WP_025244497.1;Name=WP_025244497.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_025244497.1;transl_table=11 NZ_CP006568.1 RefSeq gene 921431 922393 . + . ID=gene974;Name=SOPEG_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04815;old_locus_tag=SOPEG_0909 NZ_CP006568.1 Protein Homology CDS 921431 922393 . + 0 ID=cds957;Parent=gene974;Dbxref=Genbank:WP_025244498.1;Name=WP_025244498.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=6-phosphofructokinase;protein_id=WP_025244498.1;transl_table=11 NZ_CP006568.1 RefSeq gene 922598 923590 . + . ID=gene975;Name=SOPEG_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04820;old_locus_tag=SOPEG_0910 NZ_CP006568.1 Protein Homology CDS 922598 923590 . + 0 ID=cds958;Parent=gene975;Dbxref=Genbank:WP_025244499.1;Name=WP_025244499.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_025244499.1;transl_table=11 NZ_CP006568.1 RefSeq gene 923708 924475 . - . ID=gene976;Name=SOPEG_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04825;old_locus_tag=SOPEG_0911 NZ_CP006568.1 Protein Homology CDS 923708 924475 . - 0 ID=cds959;Parent=gene976;Dbxref=Genbank:WP_025244500.1;Name=WP_025244500.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_025244500.1;transl_table=11 NZ_CP006568.1 RefSeq gene 924601 925155 . - . ID=gene977;Name=SOPEG_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04830;old_locus_tag=SOPEG_0912 NZ_CP006568.1 Protein Homology CDS 924601 925155 . - 0 ID=cds960;Parent=gene977;Dbxref=Genbank:WP_038469614.1;Name=WP_038469614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469614.1;transl_table=11 NZ_CP006568.1 RefSeq gene 925221 925967 . - . ID=gene978;Name=SOPEG_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04835;old_locus_tag=SOPEG_0913 NZ_CP006568.1 Protein Homology CDS 925221 925967 . - 0 ID=cds961;Parent=gene978;Dbxref=Genbank:WP_025244502.1;Name=WP_025244502.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_025244502.1;transl_table=11 NZ_CP006568.1 RefSeq gene 926350 927534 . + . ID=gene979;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=SOPEG_RS04840;old_locus_tag=SOPEG_0914 NZ_CP006568.1 Protein Homology CDS 926350 927534 . + 0 ID=cds962;Parent=gene979;Dbxref=Genbank:WP_025244503.1;Name=WP_025244503.1;Note=multidrug efflux protein involved in adaptation to low energy shock;gbkey=CDS;gene=emrD;product=multidrug resistance protein D;protein_id=WP_025244503.1;transl_table=11 NZ_CP006568.1 RefSeq gene 927564 928488 . - . ID=gene980;Name=SOPEG_RS04845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04845;pseudo=true NZ_CP006568.1 Protein Homology CDS 927564 928488 . - 0 ID=cds963;Parent=gene980;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 928585 930083 . - . ID=gene981;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=SOPEG_RS04850;pseudo=true NZ_CP006568.1 Protein Homology CDS 928585 930083 . - 0 ID=cds964;Parent=gene981;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=glpK;product=glycerol kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 930122 930985 . - . ID=gene982;Name=SOPEG_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04855 NZ_CP006568.1 Protein Homology CDS 930122 930985 . - 0 ID=cds965;Parent=gene982;Dbxref=Genbank:WP_025244504.1;Name=WP_025244504.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator GlpF;protein_id=WP_025244504.1;transl_table=11 NZ_CP006568.1 RefSeq gene 931504 931743 . + . ID=gene983;Name=SOPEG_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04860;old_locus_tag=SOPEG_0918 NZ_CP006568.1 Protein Homology CDS 931504 931743 . + 0 ID=cds966;Parent=gene983;Dbxref=Genbank:WP_025244505.1;Name=WP_025244505.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=septal ring assembly protein ZapB;protein_id=WP_025244505.1;transl_table=11 NZ_CP006568.1 RefSeq gene 931945 932423 . - . ID=gene984;Name=SOPEG_RS04865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04865;pseudo=true NZ_CP006568.1 Protein Homology CDS 931945 932423 . - 0 ID=cds967;Parent=gene984;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribonuclease activity regulator protein RraA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 932530 933373 . - . ID=gene985;Name=SOPEG_RS04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04870;pseudo=true NZ_CP006568.1 Protein Homology CDS 932530 933373 . - 0 ID=cds968;Parent=gene985;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 933463 934794 . - . ID=gene986;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=SOPEG_RS04875;old_locus_tag=SOPEG_0921 NZ_CP006568.1 Protein Homology CDS 933463 934794 . - 0 ID=cds969;Parent=gene986;Dbxref=Genbank:WP_025244506.1;Name=WP_025244506.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=WP_025244506.1;transl_table=11 NZ_CP006568.1 RefSeq gene 934806 935336 . - . ID=gene987;Name=SOPEG_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04880;old_locus_tag=SOPEG_0922 NZ_CP006568.1 Protein Homology CDS 934806 935336 . - 0 ID=cds970;Parent=gene987;Dbxref=Genbank:WP_025244507.1;Name=WP_025244507.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_025244507.1;transl_table=11 NZ_CP006568.1 RefSeq gene 935424 936158 . - . ID=gene988;Name=SOPEG_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04885;old_locus_tag=SOPEG_0923 NZ_CP006568.1 Protein Homology CDS 935424 936158 . - 0 ID=cds971;Parent=gene988;Dbxref=Genbank:WP_038468259.1;Name=WP_038468259.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_038468259.1;transl_table=11 NZ_CP006568.1 RefSeq gene 936351 937007 . - . ID=gene989;Name=SOPEG_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22555;old_locus_tag=SOPEG_ps0924 NZ_CP006568.1 Protein Homology CDS 936351 937007 . - 0 ID=cds972;Parent=gene989;Dbxref=Genbank:WP_025244509.1;Name=WP_025244509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244509.1;transl_table=11 NZ_CP006568.1 RefSeq gene 937149 939344 . - . ID=gene990;Name=SOPEG_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04895;old_locus_tag=SOPEG_0925 NZ_CP006568.1 Protein Homology CDS 937149 939344 . - 0 ID=cds973;Parent=gene990;Dbxref=Genbank:WP_025244510.1;Name=WP_025244510.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_025244510.1;transl_table=11 NZ_CP006568.1 RefSeq gene 939549 939764 . + . ID=gene991;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=SOPEG_RS04900;old_locus_tag=SOPEG_0926 NZ_CP006568.1 Protein Homology CDS 939549 939764 . + 0 ID=cds974;Parent=gene991;Dbxref=Genbank:WP_025244511.1;Name=WP_025244511.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_025244511.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 940058 943979 . + . ID=id140;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 940136 941208 . + . ID=gene992;Name=SOPEG_RS04905;end_range=941208,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04905;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 940136 941208 . + 0 ID=cds975;Parent=gene992;end_range=941208,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 941146 941343 . + . ID=gene993;Name=SOPEG_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04910 NZ_CP006568.1 Protein Homology CDS 941146 941343 . + 0 ID=cds976;Parent=gene993;Dbxref=Genbank:WP_032655535.1;Name=WP_032655535.1;gbkey=CDS;product=transposase;protein_id=WP_032655535.1;transl_table=11 NZ_CP006568.1 RefSeq gene 941501 942250 . - . ID=gene994;Name=SOPEG_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04915;old_locus_tag=SOPEG_0929 NZ_CP006568.1 Protein Homology CDS 941501 942250 . - 0 ID=cds977;Parent=gene994;Dbxref=Genbank:WP_025244512.1;Name=WP_025244512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244512.1;transl_table=11 NZ_CP006568.1 RefSeq gene 942262 943779 . - . ID=gene995;Name=SOPEG_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04920;old_locus_tag=SOPEG_0930 NZ_CP006568.1 Protein Homology CDS 942262 943779 . - 0 ID=cds978;Parent=gene995;Dbxref=Genbank:WP_025244513.1;Name=WP_025244513.1;gbkey=CDS;product=transposase;protein_id=WP_025244513.1;transl_table=11 NZ_CP006568.1 RefSeq gene 943947 944597 . - . ID=gene996;Name=SOPEG_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04925 NZ_CP006568.1 Protein Homology CDS 943947 944597 . - 0 ID=cds979;Parent=gene996;Dbxref=Genbank:WP_025244514.1;Name=WP_025244514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244514.1;transl_table=11 NZ_CP006568.1 RefSeq gene 944933 945220 . + . ID=gene997;Name=SOPEG_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04930 NZ_CP006568.1 Protein Homology CDS 944933 945220 . + 0 ID=cds980;Parent=gene997;Dbxref=Genbank:WP_025244515.1;Name=WP_025244515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244515.1;transl_table=11 NZ_CP006568.1 RefSeq gene 945371 946084 . - . ID=gene998;Name=SOPEG_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04940 NZ_CP006568.1 Protein Homology CDS 945371 946084 . - 0 ID=cds981;Parent=gene998;Dbxref=Genbank:WP_025244516.1;Name=WP_025244516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244516.1;transl_table=11 NZ_CP006568.1 RefSeq gene 946817 949412 . + . ID=gene999;Name=SOPEG_RS04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04945;pseudo=true NZ_CP006568.1 Protein Homology CDS 946817 949412 . + 0 ID=cds982;Parent=gene999;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 949634 949945 . + . ID=gene1000;Name=SOPEG_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04950 NZ_CP006568.1 Protein Homology CDS 949634 949945 . + 0 ID=cds983;Parent=gene1000;Dbxref=Genbank:WP_038468265.1;Name=WP_038468265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468265.1;transl_table=11 NZ_CP006568.1 RefSeq gene 950037 950833 . - . ID=gene1001;Name=SOPEG_RS04955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04955;pseudo=true NZ_CP006568.1 Protein Homology CDS 950037 950833 . - 0 ID=cds984;Parent=gene1001;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=S-adenosylmethionine decarboxylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 950862 951718 . - . ID=gene1002;Name=SOPEG_RS04960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04960;pseudo=true NZ_CP006568.1 Protein Homology CDS 950862 951718 . - 0 ID=cds985;Parent=gene1002;exception=annotated by transcript or proteomic data;gbkey=CDS;product=spermidine synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 951922 952984 . + . ID=id141;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 951982 952905 . - . ID=gene1003;Name=SOPEG_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04965;old_locus_tag=SOPEG_0937 NZ_CP006568.1 Protein Homology CDS 951982 952905 . - 0 ID=cds986;Parent=gene1003;Dbxref=Genbank:WP_025244427.1;Name=WP_025244427.1;gbkey=CDS;product=transposase;protein_id=WP_025244427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 952979 953239 . - . ID=gene1004;Name=SOPEG_RS04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04970;partial=true;pseudo=true;start_range=.,952979 NZ_CP006568.1 Protein Homology CDS 952979 953239 . - 0 ID=cds987;Parent=gene1004;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,952979;transl_table=11 NZ_CP006568.1 RefSeq gene 953468 954564 . - . ID=gene1005;Name=SOPEG_RS04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04975;pseudo=true NZ_CP006568.1 Protein Homology CDS 953468 954564 . - 0 ID=cds988;Parent=gene1005;exception=annotated by transcript or proteomic data;gbkey=CDS;product=histidine kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 954861 956425 . + . ID=gene1006;Name=SOPEG_RS04980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS04980;pseudo=true NZ_CP006568.1 Protein Homology CDS 954861 956425 . + 0 ID=cds989;Parent=gene1006;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_except=(pos:955961..955963%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 956772 957314 . + . ID=gene1007;Name=SOPEG_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04985;old_locus_tag=SOPEG_0940 NZ_CP006568.1 Protein Homology CDS 956772 957314 . + 0 ID=cds990;Parent=gene1007;Dbxref=Genbank:WP_025244518.1;Name=WP_025244518.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_025244518.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 957650 958712 . + . ID=id142;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 957710 958633 . - . ID=gene1008;Name=SOPEG_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04990;old_locus_tag=SOPEG_0941 NZ_CP006568.1 Protein Homology CDS 957710 958633 . - 0 ID=cds991;Parent=gene1008;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 958908 959486 . - . ID=gene1009;Name=SOPEG_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS04995 NZ_CP006568.1 GeneMarkS+ CDS 958908 959486 . - 0 ID=cds992;Parent=gene1009;Dbxref=Genbank:WP_025244519.1;Name=WP_025244519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244519.1;transl_table=11 NZ_CP006568.1 RefSeq gene 959521 959730 . - . ID=gene1010;Name=SOPEG_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05000 NZ_CP006568.1 GeneMarkS+ CDS 959521 959730 . - 0 ID=cds993;Parent=gene1010;Dbxref=Genbank:WP_025244520.1;Name=WP_025244520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244520.1;transl_table=11 NZ_CP006568.1 RefSeq gene 960499 961155 . - . ID=gene1011;Name=SOPEG_RS05005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05005;pseudo=true NZ_CP006568.1 Protein Homology CDS 960499 961155 . - 0 ID=cds994;Parent=gene1011;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;pseudo=true;transl_except=(pos:complement(960619..960621)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 961266 962198 . + . ID=gene1012;Name=SOPEG_RS05010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05010;pseudo=true NZ_CP006568.1 Protein Homology CDS 961266 962198 . + 0 ID=cds995;Parent=gene1012;gbkey=CDS;product=ABC transporter;pseudo=true;transl_except=(pos:961305..961307%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 962195 962958 . + . ID=gene1013;Name=SOPEG_RS05015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05015;pseudo=true NZ_CP006568.1 Protein Homology CDS 962195 962958 . + 0 ID=cds996;Parent=gene1013;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 963044 963424 . - . ID=gene1014;Name=SOPEG_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05020;old_locus_tag=SOPEG_0946 NZ_CP006568.1 Protein Homology CDS 963044 963424 . - 0 ID=cds997;Parent=gene1014;Dbxref=Genbank:WP_025244521.1;Name=WP_025244521.1;gbkey=CDS;product=aspartate decarboxylase;protein_id=WP_025244521.1;transl_table=11 NZ_CP006568.1 RefSeq gene 963445 964299 . - . ID=gene1015;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=SOPEG_RS05025;old_locus_tag=SOPEG_0947 NZ_CP006568.1 Protein Homology CDS 963445 964299 . - 0 ID=cds998;Parent=gene1015;Dbxref=Genbank:WP_025244522.1;Name=WP_025244522.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=WP_025244522.1;transl_table=11 NZ_CP006568.1 RefSeq gene 964311 965102 . - . ID=gene1016;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=SOPEG_RS05030;old_locus_tag=SOPEG_0948 NZ_CP006568.1 Protein Homology CDS 964311 965102 . - 0 ID=cds999;Parent=gene1016;Dbxref=Genbank:WP_025244523.1;Name=WP_025244523.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_025244523.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 965132 966194 . + . ID=id143;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 965191 965637 . - . ID=gene1017;Name=SOPEG_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05035 NZ_CP006568.1 Protein Homology CDS 965191 965637 . - 0 ID=cds1000;Parent=gene1017;Dbxref=Genbank:WP_038469629.1;Name=WP_038469629.1;gbkey=CDS;product=transposase;protein_id=WP_038469629.1;transl_table=11 NZ_CP006568.1 RefSeq gene 965716 965955 . - . ID=gene1018;Name=SOPEG_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05040 NZ_CP006568.1 Protein Homology CDS 965716 965955 . - 0 ID=cds1001;Parent=gene1018;Dbxref=Genbank:WP_038468268.1;Name=WP_038468268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468268.1;transl_table=11 NZ_CP006568.1 RefSeq gene 966390 966896 . - . ID=gene1019;Name=SOPEG_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05045;old_locus_tag=SOPEG_0950 NZ_CP006568.1 Protein Homology CDS 966390 966896 . - 0 ID=cds1002;Parent=gene1019;Dbxref=Genbank:WP_025244524.1;Name=WP_025244524.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_025244524.1;transl_table=11 NZ_CP006568.1 RefSeq gene 966896 968308 . - . ID=gene1020;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=SOPEG_RS05050;old_locus_tag=SOPEG_0951 NZ_CP006568.1 Protein Homology CDS 966896 968308 . - 0 ID=cds1003;Parent=gene1020;Dbxref=Genbank:WP_025244525.1;Name=WP_025244525.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_025244525.1;transl_table=11 NZ_CP006568.1 RefSeq gene 968387 969259 . - . ID=gene1021;Name=SOPEG_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05055;old_locus_tag=SOPEG_0952 NZ_CP006568.1 Protein Homology CDS 968387 969259 . - 0 ID=cds1004;Parent=gene1021;Dbxref=Genbank:WP_038468272.1;Name=WP_038468272.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_038468272.1;transl_table=11 NZ_CP006568.1 RefSeq gene 969342 969797 . - . ID=gene1022;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=SOPEG_RS05060;old_locus_tag=SOPEG_0953 NZ_CP006568.1 Protein Homology CDS 969342 969797 . - 0 ID=cds1005;Parent=gene1022;Dbxref=Genbank:WP_025244526.1;Name=WP_025244526.1;gbkey=CDS;gene=dksA;product=RNA polymerase-binding transcription factor;protein_id=WP_025244526.1;transl_table=11 NZ_CP006568.1 RefSeq gene 969993 970700 . - . ID=gene1023;Name=SOPEG_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05065;old_locus_tag=SOPEG_0954 NZ_CP006568.1 Protein Homology CDS 969993 970700 . - 0 ID=cds1006;Parent=gene1023;Dbxref=Genbank:WP_025244527.1;Name=WP_025244527.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244527.1;transl_table=11 NZ_CP006568.1 RefSeq gene 970804 971061 . - . ID=gene1024;Name=SOPEG_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05070 NZ_CP006568.1 Protein Homology CDS 970804 971061 . - 0 ID=cds1007;Parent=gene1024;Dbxref=Genbank:WP_051419487.1;Name=WP_051419487.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419487.1;transl_table=11 NZ_CP006568.1 RefSeq gene 971196 972074 . + . ID=gene1025;Name=SOPEG_RS05075;end_range=972074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05075;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 971196 972074 . + 0 ID=cds1008;Parent=gene1025;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;end_range=972074,.;gbkey=CDS;partial=true;product=ATP-dependent helicase HrpB;pseudo=true;transl_except=(pos:971406..971408%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 972405 974909 . + . ID=gene1026;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=SOPEG_RS05080;old_locus_tag=SOPEG_0957 NZ_CP006568.1 Protein Homology CDS 972405 974909 . + 0 ID=cds1009;Parent=gene1026;Dbxref=Genbank:WP_025244530.1;Name=WP_025244530.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_025244530.1;transl_table=11 NZ_CP006568.1 RefSeq gene 975105 975683 . - . ID=gene1027;Name=SOPEG_RS05085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05085;partial=true;pseudo=true;start_range=.,975105 NZ_CP006568.1 Protein Homology CDS 975105 975683 . - 0 ID=cds1010;Parent=gene1027;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,975105;transl_table=11 NZ_CP006568.1 RefSeq gene 975926 976405 . - . ID=gene1028;Name=SOPEG_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05090;old_locus_tag=SOPEG_0959 NZ_CP006568.1 Protein Homology CDS 975926 976405 . - 0 ID=cds1011;Parent=gene1028;Dbxref=Genbank:WP_025244532.1;Name=WP_025244532.1;gbkey=CDS;product=acyl dehydratase;protein_id=WP_025244532.1;transl_table=11 NZ_CP006568.1 RefSeq gene 976452 977227 . - . ID=gene1029;Name=SOPEG_RS05095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05095;pseudo=true NZ_CP006568.1 Protein Homology CDS 976452 977227 . - 0 ID=cds1012;Parent=gene1029;exception=annotated by transcript or proteomic data;gbkey=CDS;product=3-ketoacyl-ACP reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 977227 978553 . - . ID=gene1030;Name=SOPEG_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05100;pseudo=true NZ_CP006568.1 Protein Homology CDS 977227 978553 . - 0 ID=cds1013;Parent=gene1030;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl hydrolase;pseudo=true;transl_except=(pos:complement(978050..978052)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 978635 979456 . - . ID=gene1031;Name=SOPEG_RS05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05105;partial=true;pseudo=true;start_range=.,978635 NZ_CP006568.1 Protein Homology CDS 978635 979456 . - 0 ID=cds1014;Parent=gene1031;gbkey=CDS;partial=true;product=endonuclease;pseudo=true;start_range=.,978635;transl_except=(pos:complement(978869..978871)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 979444 979662 . - . ID=gene1032;Name=SOPEG_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05110 NZ_CP006568.1 Protein Homology CDS 979444 979662 . - 0 ID=cds1015;Parent=gene1032;Dbxref=Genbank:WP_025244533.1;Name=WP_025244533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244533.1;transl_table=11 NZ_CP006568.1 RefSeq gene 979649 980116 . - . ID=gene1033;Name=SOPEG_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05115 NZ_CP006568.1 Protein Homology CDS 979649 980116 . - 0 ID=cds1016;Parent=gene1033;Dbxref=Genbank:WP_025244534.1;Name=WP_025244534.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244534.1;transl_table=11 NZ_CP006568.1 RefSeq gene 980113 980526 . - . ID=gene1034;Name=SOPEG_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05120 NZ_CP006568.1 Protein Homology CDS 980113 980526 . - 0 ID=cds1017;Parent=gene1034;Dbxref=Genbank:WP_025244535.1;Name=WP_025244535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244535.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 980566 981627 . + . ID=id144;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 980626 981549 . - . ID=gene1035;Name=SOPEG_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05125;old_locus_tag=SOPEG_0965 NZ_CP006568.1 Protein Homology CDS 980626 981549 . - 0 ID=cds1018;Parent=gene1035;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 981597 982214 . - . ID=gene1036;Name=SOPEG_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22560 NZ_CP006568.1 Protein Homology CDS 981597 982214 . - 0 ID=cds1019;Parent=gene1036;Dbxref=Genbank:WP_051419490.1;Name=WP_051419490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419490.1;transl_table=11 NZ_CP006568.1 RefSeq gene 982193 982804 . - . ID=gene1037;Name=SOPEG_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22565 NZ_CP006568.1 Protein Homology CDS 982193 982804 . - 0 ID=cds1020;Parent=gene1037;Dbxref=Genbank:WP_051419491.1;Name=WP_051419491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419491.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 982915 983985 . + . ID=id145;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 982979 983902 . - . ID=gene1038;Name=SOPEG_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05135;old_locus_tag=SOPEG_0967 NZ_CP006568.1 Protein Homology CDS 982979 983902 . - 0 ID=cds1021;Parent=gene1038;Dbxref=Genbank:WP_025244536.1;Name=WP_025244536.1;gbkey=CDS;product=transposase;protein_id=WP_025244536.1;transl_table=11 NZ_CP006568.1 RefSeq gene 984203 984955 . - . ID=gene1039;Name=SOPEG_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05140;old_locus_tag=SOPEG_0968 NZ_CP006568.1 Protein Homology CDS 984203 984955 . - 0 ID=cds1022;Parent=gene1039;Dbxref=Genbank:WP_038468275.1;Name=WP_038468275.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_038468275.1;transl_table=11 NZ_CP006568.1 RefSeq gene 985083 986414 . - . ID=gene1040;Name=SOPEG_RS05145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05145;pseudo=true NZ_CP006568.1 Protein Homology CDS 985083 986414 . - 0 ID=cds1023;Parent=gene1040;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(986385..986387)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 986520 989127 . + . ID=id146;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 986724 988241 . + . ID=gene1041;Name=SOPEG_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05150;old_locus_tag=SOPEG_0970 NZ_CP006568.1 Protein Homology CDS 986724 988241 . + 0 ID=cds1024;Parent=gene1041;Dbxref=Genbank:WP_038468282.1;Name=WP_038468282.1;gbkey=CDS;product=transposase;protein_id=WP_038468282.1;transl_table=11 NZ_CP006568.1 RefSeq gene 988253 989002 . + . ID=gene1042;Name=SOPEG_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05155;old_locus_tag=SOPEG_0971 NZ_CP006568.1 Protein Homology CDS 988253 989002 . + 0 ID=cds1025;Parent=gene1042;Dbxref=Genbank:WP_025244538.1;Name=WP_025244538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244538.1;transl_table=11 NZ_CP006568.1 RefSeq gene 989185 989899 . - . ID=gene1043;Name=SOPEG_RS05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05160;partial=true;pseudo=true;start_range=.,989185 NZ_CP006568.1 Protein Homology CDS 989185 989899 . - 0 ID=cds1026;Parent=gene1043;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=enoyl-CoA hydratase;pseudo=true;start_range=.,989185;transl_table=11 NZ_CP006568.1 RefSeq gene 990267 990488 . + . ID=gene1044;Name=SOPEG_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05165 NZ_CP006568.1 Protein Homology CDS 990267 990488 . + 0 ID=cds1027;Parent=gene1044;Dbxref=Genbank:WP_025244539.1;Name=WP_025244539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244539.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 990396 993331 . + . ID=id147;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 990822 992015 . - . ID=gene1045;Name=SOPEG_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05170 NZ_CP006568.1 Protein Homology CDS 990822 992015 . - 0 ID=cds1028;Parent=gene1045;Dbxref=Genbank:WP_051419494.1;Name=WP_051419494.1;gbkey=CDS;product=transposase;protein_id=WP_051419494.1;transl_table=11 NZ_CP006568.1 RefSeq gene 992088 993293 . + . ID=gene1046;Name=SOPEG_RS05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05175;old_locus_tag=SOPEG_0975;pseudo=true NZ_CP006568.1 Protein Homology CDS 992088 993293 . + 0 ID=cds1029;Parent=gene1046;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 993408 993607 . - . ID=gene1047;Name=SOPEG_RS05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05180;partial=true;pseudo=true;start_range=.,993408 NZ_CP006568.1 Protein Homology CDS 993408 993607 . - 0 ID=cds1030;Parent=gene1047;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=DNA polymerase III subunit theta;pseudo=true;start_range=.,993408;transl_table=11 NZ_CP006568.1 RefSeq gene 993604 994200 . - . ID=gene1048;Name=SOPEG_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05185;old_locus_tag=SOPEG_0977 NZ_CP006568.1 Protein Homology CDS 993604 994200 . - 0 ID=cds1031;Parent=gene1048;Dbxref=Genbank:WP_025244541.1;Name=WP_025244541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244541.1;transl_table=11 NZ_CP006568.1 RefSeq gene 994350 994568 . + . ID=gene1049;Name=SOPEG_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05190 NZ_CP006568.1 Protein Homology CDS 994350 994568 . + 0 ID=cds1032;Parent=gene1049;Dbxref=Genbank:WP_025244542.1;Name=WP_025244542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244542.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 995203 996530 . + . ID=id148;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 995243 996451 . - . ID=gene1050;Name=SOPEG_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05200;old_locus_tag=SOPEG_0979 NZ_CP006568.1 Protein Homology CDS 995243 996451 . - 0 ID=cds1033;Parent=gene1050;Dbxref=Genbank:WP_025244543.1;Name=WP_025244543.1;gbkey=CDS;product=transposase;protein_id=WP_025244543.1;transl_table=11 NZ_CP006568.1 RefSeq gene 997168 997467 . + . ID=gene1051;Name=SOPEG_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05205;old_locus_tag=SOPEG_0980 NZ_CP006568.1 Protein Homology CDS 997168 997467 . + 0 ID=cds1034;Parent=gene1051;Dbxref=Genbank:WP_051419496.1;Name=WP_051419496.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419496.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 997743 999302 . + . ID=id149;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 997801 997941 . - . ID=gene1052;Name=SOPEG_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05210 NZ_CP006568.1 Protein Homology CDS 997801 997941 . - 0 ID=cds1035;Parent=gene1052;Dbxref=Genbank:WP_038468292.1;Name=WP_038468292.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468292.1;transl_table=11 NZ_CP006568.1 RefSeq gene 998053 998450 . + . ID=gene1053;Name=SOPEG_RS05215;end_range=998450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05215;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 998053 998450 . + 0 ID=cds1036;Parent=gene1053;end_range=998450,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 998694 999263 . + . ID=gene1054;Name=SOPEG_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05220 NZ_CP006568.1 Protein Homology CDS 998694 999263 . + 0 ID=cds1037;Parent=gene1054;Dbxref=Genbank:WP_025244545.1;Name=WP_025244545.1;gbkey=CDS;product=transposase;protein_id=WP_025244545.1;transl_table=11 NZ_CP006568.1 RefSeq gene 999286 999591 . + . ID=gene1055;Name=SOPEG_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05225 NZ_CP006568.1 Protein Homology CDS 999286 999591 . + 0 ID=cds1038;Parent=gene1055;Dbxref=Genbank:WP_051419498.1;Name=WP_051419498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419498.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1000156 1000953 . + . ID=gene1056;Name=SOPEG_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05230;old_locus_tag=SOPEG_0983 NZ_CP006568.1 Protein Homology CDS 1000156 1000953 . + 0 ID=cds1039;Parent=gene1056;Dbxref=Genbank:WP_025244547.1;Name=WP_025244547.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=WP_025244547.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1000953 1001840 . + . ID=gene1057;Name=SOPEG_RS05235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05235;pseudo=true NZ_CP006568.1 Protein Homology CDS 1000953 1001840 . + 0 ID=cds1040;Parent=gene1057;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;pseudo=true;transl_except=(pos:1001022..1001024%2Caa:Other),(pos:1001418..1001420%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1001901 1002212 . + . ID=gene1058;Name=SOPEG_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05240 NZ_CP006568.1 Protein Homology CDS 1001901 1002212 . + 0 ID=cds1041;Parent=gene1058;Dbxref=Genbank:WP_025244548.1;Name=WP_025244548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244548.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1002196 1002381 . + . ID=gene1059;Name=SOPEG_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05245 NZ_CP006568.1 GeneMarkS+ CDS 1002196 1002381 . + 0 ID=cds1042;Parent=gene1059;Dbxref=Genbank:WP_025244549.1;Name=WP_025244549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244549.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1002554 1003834 . - . ID=gene1060;Name=SOPEG_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05250;old_locus_tag=SOPEG_0986 NZ_CP006568.1 Protein Homology CDS 1002554 1003834 . - 0 ID=cds1043;Parent=gene1060;Dbxref=Genbank:WP_025244550.1;Name=WP_025244550.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde aminotransferase;protein_id=WP_025244550.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1003920 1006499 . + . ID=id150;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1004043 1004793 . - . ID=gene1061;Name=SOPEG_RS05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05255;pseudo=true NZ_CP006568.1 Protein Homology CDS 1004043 1004793 . - 0 ID=cds1044;Parent=gene1061;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1004805 1006322 . - . ID=gene1062;Name=SOPEG_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05260;old_locus_tag=SOPEG_0988 NZ_CP006568.1 Protein Homology CDS 1004805 1006322 . - 0 ID=cds1045;Parent=gene1062;Dbxref=Genbank:WP_025244552.1;Name=WP_025244552.1;gbkey=CDS;product=transposase;protein_id=WP_025244552.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1006591 1008034 . + . ID=gene1063;Name=SOPEG_RS05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05265;pseudo=true NZ_CP006568.1 Protein Homology CDS 1006591 1008034 . + 0 ID=cds1046;Parent=gene1063;exception=annotated by transcript or proteomic data;gbkey=CDS;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1008117 1008461 . + . ID=gene1064;Name=SOPEG_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05270;old_locus_tag=SOPEG_0990 NZ_CP006568.1 Protein Homology CDS 1008117 1008461 . + 0 ID=cds1047;Parent=gene1064;Dbxref=Genbank:WP_025244553.1;Name=WP_025244553.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_025244553.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1008562 1009182 . - . ID=gene1065;Name=SOPEG_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05275;old_locus_tag=SOPEG_0991 NZ_CP006568.1 Protein Homology CDS 1008562 1009182 . - 0 ID=cds1048;Parent=gene1065;Dbxref=Genbank:WP_025244554.1;Name=WP_025244554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244554.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1009179 1009879 . - . ID=gene1066;Name=SOPEG_RS05280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05280;pseudo=true NZ_CP006568.1 Protein Homology CDS 1009179 1009879 . - 0 ID=cds1049;Parent=gene1066;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Vitamin B12-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1009880 1010581 . - . ID=gene1067;Name=SOPEG_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05285 NZ_CP006568.1 Protein Homology CDS 1009880 1010581 . - 0 ID=cds1050;Parent=gene1067;Dbxref=Genbank:WP_025244555.1;Name=WP_025244555.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine nucleosidase;protein_id=WP_025244555.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1010742 1012256 . + . ID=gene1068;Name=SOPEG_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05290;old_locus_tag=SOPEG_0994 NZ_CP006568.1 Protein Homology CDS 1010742 1012256 . + 0 ID=cds1051;Parent=gene1068;Dbxref=Genbank:WP_025244556.1;Name=WP_025244556.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_025244556.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1012411 1013856 . + . ID=gene1069;Name=SOPEG_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05295;old_locus_tag=SOPEG_0995 NZ_CP006568.1 Protein Homology CDS 1012411 1013856 . + 0 ID=cds1052;Parent=gene1069;Dbxref=Genbank:WP_025244557.1;Name=WP_025244557.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_025244557.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1014036 1015179 . + . ID=gene1070;Name=SOPEG_RS05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05300;pseudo=true NZ_CP006568.1 Protein Homology CDS 1014036 1015179 . + 0 ID=cds1053;Parent=gene1070;Note=regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1015466 1016782 . - . ID=gene1071;Name=SOPEG_RS05305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05305;partial=true;pseudo=true;start_range=.,1015466 NZ_CP006568.1 Protein Homology CDS 1015466 1016782 . - 0 ID=cds1054;Parent=gene1071;gbkey=CDS;partial=true;product=glucarate transporter;pseudo=true;start_range=.,1015466;transl_except=(pos:complement(1016486..1016488)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1017119 1018437 . + . ID=id151;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1017191 1018399 . + . ID=gene1072;Name=SOPEG_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05310;old_locus_tag=SOPEG_0998 NZ_CP006568.1 Protein Homology CDS 1017191 1018399 . + 0 ID=cds1055;Parent=gene1072;Dbxref=Genbank:WP_025244558.1;Name=WP_025244558.1;gbkey=CDS;product=transposase;protein_id=WP_025244558.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1018685 1019985 . + . ID=gene1073;Name=SOPEG_RS05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05315;pseudo=true NZ_CP006568.1 Protein Homology CDS 1018685 1019985 . + 0 ID=cds1056;Parent=gene1073;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glucarate dehydratase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1020025 1020981 . - . ID=gene1074;Name=SOPEG_RS05320;end_range=1020981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05320;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1020025 1020981 . - 0 ID=cds1057;Parent=gene1074;end_range=1020981,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1021057 1021557 . + . ID=gene1075;Name=SOPEG_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05325 NZ_CP006568.1 Protein Homology CDS 1021057 1021557 . + 0 ID=cds1058;Parent=gene1075;Dbxref=Genbank:WP_051419501.1;Name=WP_051419501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419501.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1021743 1023311 . - . ID=gene1076;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=SOPEG_RS05330;old_locus_tag=SOPEG_1002 NZ_CP006568.1 Protein Homology CDS 1021743 1023311 . - 0 ID=cds1059;Parent=gene1076;Dbxref=Genbank:WP_025244561.1;Name=WP_025244561.1;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate;gbkey=CDS;gene=garD;product=galactarate dehydrogenase;protein_id=WP_025244561.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1023782 1025113 . + . ID=gene1077;Name=SOPEG_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05335;old_locus_tag=SOPEG_1003 NZ_CP006568.1 Protein Homology CDS 1023782 1025113 . + 0 ID=cds1060;Parent=gene1077;Dbxref=Genbank:WP_025244562.1;Name=WP_025244562.1;gbkey=CDS;product=galactonate transporter;protein_id=WP_025244562.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1025174 1025939 . + . ID=gene1078;Name=SOPEG_RS05340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05340;pseudo=true NZ_CP006568.1 Protein Homology CDS 1025174 1025939 . + 0 ID=cds1061;Parent=gene1078;Note=cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1026024 1026911 . + . ID=gene1079;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=SOPEG_RS05345;old_locus_tag=SOPEG_1005 NZ_CP006568.1 Protein Homology CDS 1026024 1026911 . + 0 ID=cds1062;Parent=gene1079;Dbxref=Genbank:WP_025244563.1;Name=WP_025244563.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;gbkey=CDS;gene=garR;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_025244563.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1027000 1027770 . + . ID=gene1080;Name=SOPEG_RS05350;end_range=1027770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05350;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1027000 1027770 . + 0 ID=cds1063;Parent=gene1080;end_range=1027770,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=glycerate kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1027777 1030554 . - . ID=gene1081;Name=SOPEG_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05355;old_locus_tag=SOPEG_1007 NZ_CP006568.1 Protein Homology CDS 1027777 1030554 . - 0 ID=cds1064;Parent=gene1081;Dbxref=Genbank:WP_025244566.1;Name=WP_025244566.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_025244566.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1030615 1031949 . + . ID=gene1082;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=pseudogene;locus_tag=SOPEG_RS05360;pseudo=true NZ_CP006568.1 Protein Homology CDS 1030615 1031949 . + 0 ID=cds1065;Parent=gene1082;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S];gbkey=CDS;gene=rumA;product=23S rRNA methyltransferase;pseudo=true;transl_except=(pos:1031776..1031778%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1031959 1034193 . + . ID=gene1083;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SOPEG_RS05365;old_locus_tag=SOPEG_1009 NZ_CP006568.1 Protein Homology CDS 1031959 1034193 . + 0 ID=cds1066;Parent=gene1083;Dbxref=Genbank:WP_025244567.1;Name=WP_025244567.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=(p)ppGpp synthetase;protein_id=WP_025244567.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1034212 1035018 . + . ID=gene1084;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=SOPEG_RS05370;old_locus_tag=SOPEG_1010 NZ_CP006568.1 Protein Homology CDS 1034212 1035018 . + 0 ID=cds1067;Parent=gene1084;Dbxref=Genbank:WP_025244568.1;Name=WP_025244568.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate hydrolase;protein_id=WP_025244568.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1035291 1036928 . + . ID=gene1085;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SOPEG_RS05375;old_locus_tag=SOPEG_1011 NZ_CP006568.1 Protein Homology CDS 1035291 1036928 . + 0 ID=cds1068;Parent=gene1085;Dbxref=Genbank:WP_025244569.1;Name=WP_025244569.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_025244569.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1037008 1038309 . + . ID=gene1086;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SOPEG_RS05380;old_locus_tag=SOPEG_1012 NZ_CP006568.1 Protein Homology CDS 1037008 1038309 . + 0 ID=cds1069;Parent=gene1086;Dbxref=Genbank:WP_025244570.1;Name=WP_025244570.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_025244570.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1038478 1039158 . + . ID=gene1087;Name=SOPEG_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05385;old_locus_tag=SOPEG_1013 NZ_CP006568.1 Protein Homology CDS 1038478 1039158 . + 0 ID=cds1070;Parent=gene1087;Dbxref=Genbank:WP_025244571.1;Name=WP_025244571.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_025244571.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1039443 1039805 . - . ID=gene1088;Name=SOPEG_RS05390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05390;pseudo=true NZ_CP006568.1 Protein Homology CDS 1039443 1039805 . - 0 ID=cds1071;Parent=gene1088;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;pseudo=true;transl_except=(pos:complement(1039527..1039529)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1040145 1041959 . + . ID=gene1089;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=SOPEG_RS05395;old_locus_tag=SOPEG_1015 NZ_CP006568.1 Protein Homology CDS 1040145 1041959 . + 0 ID=cds1072;Parent=gene1089;Dbxref=Genbank:WP_025244572.1;Name=WP_025244572.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_025244572.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1041959 1043659 . + . ID=gene1090;Name=SOPEG_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05400;old_locus_tag=SOPEG_1016 NZ_CP006568.1 Protein Homology CDS 1041959 1043659 . + 0 ID=cds1073;Parent=gene1090;Dbxref=Genbank:WP_025244573.1;Name=WP_025244573.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_025244573.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1043675 1044409 . + . ID=gene1091;Name=SOPEG_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05405;old_locus_tag=SOPEG_1017 NZ_CP006568.1 Protein Homology CDS 1043675 1044409 . + 0 ID=cds1074;Parent=gene1091;Dbxref=Genbank:WP_025244574.1;Name=WP_025244574.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_025244574.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1044422 1045483 . - . ID=gene1092;Name=SOPEG_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05410;old_locus_tag=SOPEG_1018 NZ_CP006568.1 Protein Homology CDS 1044422 1045483 . - 0 ID=cds1075;Parent=gene1092;Dbxref=Genbank:WP_025244575.1;Name=WP_025244575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244575.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1045704 1047122 . + . ID=gene1093;Name=SOPEG_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05415;old_locus_tag=SOPEG_1019 NZ_CP006568.1 Protein Homology CDS 1045704 1047122 . + 0 ID=cds1076;Parent=gene1093;Dbxref=Genbank:WP_025244576.1;Name=WP_025244576.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_025244576.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1047134 1048042 . + . ID=gene1094;Name=SOPEG_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05420;old_locus_tag=SOPEG_1020 NZ_CP006568.1 Protein Homology CDS 1047134 1048042 . + 0 ID=cds1077;Parent=gene1094;Dbxref=Genbank:WP_025244577.1;Name=WP_025244577.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_025244577.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1048055 1049482 . + . ID=gene1095;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=SOPEG_RS05425;old_locus_tag=SOPEG_1021 NZ_CP006568.1 Protein Homology CDS 1048055 1049482 . + 0 ID=cds1078;Parent=gene1095;Dbxref=Genbank:WP_025244578.1;Name=WP_025244578.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_025244578.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1049482 1050102 . + . ID=gene1096;Name=SOPEG_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05430;old_locus_tag=SOPEG_1022 NZ_CP006568.1 Protein Homology CDS 1049482 1050102 . + 0 ID=cds1079;Parent=gene1096;Dbxref=Genbank:WP_025244579.1;Name=WP_025244579.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylylsulfate kinase;protein_id=WP_025244579.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1050162 1050509 . + . ID=gene1097;Name=SOPEG_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05435;old_locus_tag=SOPEG_1023 NZ_CP006568.1 Protein Homology CDS 1050162 1050509 . + 0 ID=cds1080;Parent=gene1097;Dbxref=Genbank:WP_025244580.1;Name=WP_025244580.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244580.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1050667 1050984 . + . ID=gene1098;Name=SOPEG_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05440;old_locus_tag=SOPEG_1024 NZ_CP006568.1 Protein Homology CDS 1050667 1050984 . + 0 ID=cds1081;Parent=gene1098;Dbxref=Genbank:WP_025244581.1;Name=WP_025244581.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_025244581.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1050984 1051703 . + . ID=gene1099;Name=SOPEG_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05445;old_locus_tag=SOPEG_1025 NZ_CP006568.1 Protein Homology CDS 1050984 1051703 . + 0 ID=cds1082;Parent=gene1099;Dbxref=Genbank:WP_025244582.1;Name=WP_025244582.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_025244582.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1051704 1052171 . + . ID=gene1100;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=SOPEG_RS05450;old_locus_tag=SOPEG_1026 NZ_CP006568.1 Protein Homology CDS 1051704 1052171 . + 0 ID=cds1083;Parent=gene1100;Dbxref=Genbank:WP_038468298.1;Name=WP_038468298.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_038468298.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1052177 1053236 . + . ID=gene1101;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;gene_synonym=ygbO;locus_tag=SOPEG_RS05455;pseudo=true NZ_CP006568.1 Protein Homology CDS 1052177 1053236 . + 0 ID=cds1084;Parent=gene1101;Note=catalyzes the modification of U13 in tRNA(Glu);exception=annotated by transcript or proteomic data;gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1053526 1054287 . + . ID=gene1102;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=SOPEG_RS05460;old_locus_tag=SOPEG_1028 NZ_CP006568.1 Protein Homology CDS 1053526 1054287 . + 0 ID=cds1085;Parent=gene1102;Dbxref=Genbank:WP_025244583.1;Name=WP_025244583.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=stationary phase survival protein SurE;protein_id=WP_025244583.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1054281 1054907 . + . ID=gene1103;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=SOPEG_RS05465;old_locus_tag=SOPEG_1029 NZ_CP006568.1 Protein Homology CDS 1054281 1054907 . + 0 ID=cds1086;Parent=gene1103;Dbxref=Genbank:WP_025244584.1;Name=WP_025244584.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_025244584.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1055113 1056213 . + . ID=gene1104;Name=SOPEG_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05470;old_locus_tag=SOPEG_1030 NZ_CP006568.1 Protein Homology CDS 1055113 1056213 . + 0 ID=cds1087;Parent=gene1104;Dbxref=Genbank:WP_038468300.1;Name=WP_038468300.1;gbkey=CDS;product=peptidase;protein_id=WP_038468300.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1056265 1057254 . + . ID=gene1105;Name=SOPEG_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05475;old_locus_tag=SOPEG_1031 NZ_CP006568.1 Protein Homology CDS 1056265 1057254 . + 0 ID=cds1088;Parent=gene1105;Dbxref=Genbank:WP_025244586.1;Name=WP_025244586.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_025244586.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1057459 1059990 . - . ID=gene1106;Name=SOPEG_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05480;old_locus_tag=SOPEG_1032 NZ_CP006568.1 Protein Homology CDS 1057459 1059990 . - 0 ID=cds1089;Parent=gene1106;Dbxref=Genbank:WP_051419996.1;Name=WP_051419996.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_051419996.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1060037 1060837 . - . ID=gene1107;Name=SOPEG_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05485 NZ_CP006568.1 Protein Homology CDS 1060037 1060837 . - 0 ID=cds1090;Parent=gene1107;Dbxref=Genbank:WP_025244588.1;Name=WP_025244588.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244588.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1060881 1061942 . + . ID=id152;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1060959 1061882 . + . ID=gene1108;Name=SOPEG_RS05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05490;pseudo=true NZ_CP006568.1 Protein Homology CDS 1060959 1061882 . + 0 ID=cds1091;Parent=gene1108;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1061037..1061039%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1061875 1062180 . - . ID=gene1109;Name=SOPEG_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05495 NZ_CP006568.1 Protein Homology CDS 1061875 1062180 . - 0 ID=cds1092;Parent=gene1109;Dbxref=Genbank:WP_051419503.1;Name=WP_051419503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419503.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1062282 1063608 . + . ID=id153;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1062320 1063528 . - . ID=gene1110;Name=SOPEG_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05500;old_locus_tag=SOPEG_1036 NZ_CP006568.1 Protein Homology CDS 1062320 1063528 . - 0 ID=cds1093;Parent=gene1110;Dbxref=Genbank:WP_025244590.1;Name=WP_025244590.1;gbkey=CDS;product=transposase;protein_id=WP_025244590.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1063682 1063975 . + . ID=gene1111;Name=SOPEG_RS05505;end_range=1063975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05505;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1063682 1063975 . + 0 ID=cds1094;Parent=gene1111;end_range=1063975,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1064401 1064787 . + . ID=gene1112;Name=SOPEG_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05515;old_locus_tag=SOPEG_1038 NZ_CP006568.1 Protein Homology CDS 1064401 1064787 . + 0 ID=cds1095;Parent=gene1112;Dbxref=Genbank:WP_025244592.1;Name=WP_025244592.1;gbkey=CDS;product=crossover junction endodeoxyribonuclease;protein_id=WP_025244592.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1064865 1066189 . + . ID=id154;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1064944 1066152 . + . ID=gene1113;Name=SOPEG_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05520;old_locus_tag=SOPEG_1039 NZ_CP006568.1 Protein Homology CDS 1064944 1066152 . + 0 ID=cds1096;Parent=gene1113;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1066398 1066814 . - . ID=gene1114;Name=SOPEG_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05525;old_locus_tag=SOPEG_1040 NZ_CP006568.1 Protein Homology CDS 1066398 1066814 . - 0 ID=cds1097;Parent=gene1114;Dbxref=Genbank:WP_025244593.1;Name=WP_025244593.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244593.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1066657 1071999 . + . ID=id155;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1067093 1067359 . + . ID=gene1115;Name=SOPEG_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05530;old_locus_tag=SOPEG_1041 NZ_CP006568.1 Protein Homology CDS 1067093 1067359 . + 0 ID=cds1098;Parent=gene1115;Dbxref=Genbank:WP_025244594.1;Name=WP_025244594.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244594.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1067449 1067874 . + . ID=gene1116;Name=SOPEG_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05535;old_locus_tag=SOPEG_1042 NZ_CP006568.1 Protein Homology CDS 1067449 1067874 . + 0 ID=cds1099;Parent=gene1116;Dbxref=Genbank:WP_025244595.1;Name=WP_025244595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244595.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1067885 1068112 . + . ID=gene1117;Name=SOPEG_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05540;old_locus_tag=SOPEG_1043 NZ_CP006568.1 Protein Homology CDS 1067885 1068112 . + 0 ID=cds1100;Parent=gene1117;Dbxref=Genbank:WP_025244596.1;Name=WP_025244596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244596.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1068116 1069742 . + . ID=gene1118;Name=SOPEG_RS05545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05545;old_locus_tag=SOPEG_1044;pseudo=true NZ_CP006568.1 Protein Homology CDS 1068116 1069742 . + 0 ID=cds1101;Parent=gene1118;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1069739 1069957 . + . ID=gene1119;Name=SOPEG_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05550 NZ_CP006568.1 Protein Homology CDS 1069739 1069957 . + 0 ID=cds1102;Parent=gene1119;Dbxref=Genbank:WP_025244597.1;Name=WP_025244597.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244597.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1069944 1070705 . + . ID=gene1120;Name=SOPEG_RS05555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05555;pseudo=true NZ_CP006568.1 Protein Homology CDS 1069944 1070705 . + 0 ID=cds1103;Parent=gene1120;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1070334..1070336%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1070716 1071924 . - . ID=gene1121;Name=SOPEG_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05560;old_locus_tag=SOPEG_1045 NZ_CP006568.1 Protein Homology CDS 1070716 1071924 . - 0 ID=cds1104;Parent=gene1121;Dbxref=Genbank:WP_025244598.1;Name=WP_025244598.1;gbkey=CDS;product=transposase;protein_id=WP_025244598.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1072010 1073011 . + . ID=id156;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1072288 1073016 . + . ID=gene1122;Name=SOPEG_RS05565;end_range=1073016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05565;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1072288 1073016 . + 0 ID=cds1105;Parent=gene1122;end_range=1073016,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1073015 1075264 . + . ID=id157;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1073090 1074298 . + . ID=gene1123;Name=SOPEG_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05570;old_locus_tag=SOPEG_1047 NZ_CP006568.1 Protein Homology CDS 1073090 1074298 . + 0 ID=cds1106;Parent=gene1123;Dbxref=Genbank:WP_025244600.1;Name=WP_025244600.1;gbkey=CDS;product=transposase;protein_id=WP_025244600.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1074289 1075182 . - . ID=gene1124;Name=SOPEG_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05575 NZ_CP006568.1 Protein Homology CDS 1074289 1075182 . - 0 ID=cds1107;Parent=gene1124;Dbxref=Genbank:WP_025244601.1;Name=WP_025244601.1;gbkey=CDS;product=transposase;protein_id=WP_025244601.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1075505 1076571 . + . ID=gene1125;Name=SOPEG_RS05580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05580;pseudo=true NZ_CP006568.1 Protein Homology CDS 1075505 1076571 . + 0 ID=cds1108;Parent=gene1125;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;exception=annotated by transcript or proteomic data;gbkey=CDS;product=murein hydrolase effector LrgB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1076649 1076912 . - . ID=gene1126;Name=SOPEG_RS05585;end_range=1076912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05585;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1076649 1076912 . - 0 ID=cds1109;Parent=gene1126;end_range=1076912,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=cysteine ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1076907 1079510 . + . ID=id158;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1077390 1078626 . + . ID=gene1127;Name=SOPEG_RS05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05590;pseudo=true NZ_CP006568.1 Protein Homology CDS 1077390 1078626 . + 0 ID=cds1110;Parent=gene1127;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1077577..1077579%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1078683 1079387 . + . ID=gene1128;Name=SOPEG_RS05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05595;pseudo=true NZ_CP006568.1 Protein Homology CDS 1078683 1079387 . + 0 ID=cds1111;Parent=gene1128;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1079094..1079096%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1079558 1079767 . - . ID=gene1129;Name=SOPEG_RS05600;end_range=1079767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05600;partial=true;pseudo=true;start_range=.,1079558 NZ_CP006568.1 Protein Homology CDS 1079558 1079767 . - 0 ID=cds1112;Parent=gene1129;end_range=1079767,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=cysteine ABC transporter permease;pseudo=true;start_range=.,1079558;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1079762 1081081 . + . ID=id159;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1079837 1081024 . + . ID=gene1130;Name=SOPEG_RS05605;end_range=1081024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05605;old_locus_tag=SOPEG_1054;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1079837 1081024 . + 0 ID=cds1113;Parent=gene1130;end_range=1081024,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1081068 1081265 . + . ID=gene1131;Name=SOPEG_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05610 NZ_CP006568.1 GeneMarkS+ CDS 1081068 1081265 . + 0 ID=cds1114;Parent=gene1131;Dbxref=Genbank:WP_025244603.1;Name=WP_025244603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244603.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1081259 1082029 . - . ID=gene1132;Name=SOPEG_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05615;old_locus_tag=SOPEG_1055 NZ_CP006568.1 Protein Homology CDS 1081259 1082029 . - 0 ID=cds1115;Parent=gene1132;Dbxref=Genbank:WP_025244604.1;Name=WP_025244604.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_025244604.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1082322 1082810 . + . ID=gene1133;Name=SOPEG_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05620;old_locus_tag=SOPEG_1056 NZ_CP006568.1 Protein Homology CDS 1082322 1082810 . + 0 ID=cds1116;Parent=gene1133;Dbxref=Genbank:WP_025244605.1;Name=WP_025244605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244605.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1082834 1084544 . + . ID=id160;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1082902 1084116 . + . ID=gene1134;Name=SOPEG_RS05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05625;pseudo=true NZ_CP006568.1 Protein Homology CDS 1082902 1084116 . + 0 ID=cds1117;Parent=gene1134;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1083817..1083819%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1084637 1085704 . + . ID=gene1135;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SOPEG_RS05630;old_locus_tag=SOPEG_1058 NZ_CP006568.1 Protein Homology CDS 1084637 1085704 . + 0 ID=cds1118;Parent=gene1135;Dbxref=Genbank:WP_025244606.1;Name=WP_025244606.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=recombinase RecA;protein_id=WP_025244606.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1085691 1086089 . + . ID=gene1136;Name=SOPEG_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05635 NZ_CP006568.1 Protein Homology CDS 1085691 1086089 . + 0 ID=cds1119;Parent=gene1136;Dbxref=Genbank:WP_025244607.1;Name=WP_025244607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244607.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1086236 1088863 . + . ID=gene1137;Name=SOPEG_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05640;old_locus_tag=SOPEG_1060 NZ_CP006568.1 Protein Homology CDS 1086236 1088863 . + 0 ID=cds1120;Parent=gene1137;Dbxref=Genbank:WP_025244608.1;Name=WP_025244608.1;gbkey=CDS;product=alanyl-tRNA synthetase;protein_id=WP_025244608.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1089118 1089303 . + . ID=gene1138;Name=SOPEG_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05645;old_locus_tag=SOPEG_1061 NZ_CP006568.1 Protein Homology CDS 1089118 1089303 . + 0 ID=cds1121;Parent=gene1138;Dbxref=Genbank:WP_025244609.1;Name=WP_025244609.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator;protein_id=WP_025244609.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1089569 1089661 . + . ID=gene1139;Name=SOPEG_RS05650;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS05650;old_locus_tag=SOPEG_t1062 NZ_CP006568.1 tRNAscan-SE tRNA 1089569 1089661 . + . ID=rna17;Parent=gene1139;anticodon=(pos:1089603..1089605);gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 tRNAscan-SE exon 1089569 1089661 . + . ID=id161;Parent=rna17;anticodon=(pos:1089603..1089605);gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 RefSeq gene 1089670 1089746 . + . ID=gene1140;Name=SOPEG_RS05655;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS05655;old_locus_tag=SOPEG_t1063 NZ_CP006568.1 tRNAscan-SE tRNA 1089670 1089746 . + . ID=rna18;Parent=gene1140;anticodon=(pos:1089704..1089706);gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 tRNAscan-SE exon 1089670 1089746 . + . ID=id162;Parent=rna18;anticodon=(pos:1089704..1089706);gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 RefSeq repeat_region 1089823 1091143 . + . ID=id163;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1089899 1091107 . + . ID=gene1141;Name=SOPEG_RS05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05660;pseudo=true NZ_CP006568.1 Protein Homology CDS 1089899 1091107 . + 0 ID=cds1122;Parent=gene1141;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1090830..1090832%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1091608 1092180 . + . ID=gene1142;Name=SOPEG_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05665;old_locus_tag=SOPEG_1065 NZ_CP006568.1 Protein Homology CDS 1091608 1092180 . + 0 ID=cds1123;Parent=gene1142;Dbxref=Genbank:WP_025244610.1;Name=WP_025244610.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_025244610.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1092257 1093819 . + . ID=gene1143;Name=SOPEG_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05670;old_locus_tag=SOPEG_1066 NZ_CP006568.1 Protein Homology CDS 1092257 1093819 . + 0 ID=cds1124;Parent=gene1143;Dbxref=Genbank:WP_025244611.1;Name=WP_025244611.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_025244611.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1093980 1094495 . + . ID=gene1144;Name=SOPEG_RS05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05675;pseudo=true NZ_CP006568.1 Protein Homology CDS 1093980 1094495 . + 0 ID=cds1125;Parent=gene1144;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteinase;pseudo=true;transl_except=(pos:1094328..1094330%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1094744 1096027 . - . ID=gene1145;Name=SOPEG_RS05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05680;pseudo=true NZ_CP006568.1 Protein Homology CDS 1094744 1096027 . - 0 ID=cds1126;Parent=gene1145;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1095592..1095594)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1096054 1096842 . - . ID=gene1146;Name=SOPEG_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05685;old_locus_tag=SOPEG_1069 NZ_CP006568.1 Protein Homology CDS 1096054 1096842 . - 0 ID=cds1127;Parent=gene1146;Dbxref=Genbank:WP_025244612.1;Name=WP_025244612.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244612.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1097008 1098369 . + . ID=gene1147;Name=SOPEG_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05690;old_locus_tag=SOPEG_1070 NZ_CP006568.1 Protein Homology CDS 1097008 1098369 . + 0 ID=cds1128;Parent=gene1147;Dbxref=Genbank:WP_025244613.1;Name=WP_025244613.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_025244613.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1098481 1098729 . + . ID=gene1148;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SOPEG_RS05695;old_locus_tag=SOPEG_1071 NZ_CP006568.1 Protein Homology CDS 1098481 1098729 . + 0 ID=cds1129;Parent=gene1148;Dbxref=Genbank:WP_025244614.1;Name=WP_025244614.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_025244614.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1098768 1099316 . + . ID=gene1149;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SOPEG_RS05700;old_locus_tag=SOPEG_1072 NZ_CP006568.1 Protein Homology CDS 1098768 1099316 . + 0 ID=cds1130;Parent=gene1149;Dbxref=Genbank:WP_025244615.1;Name=WP_025244615.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=WP_025244615.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1099355 1100110 . + . ID=gene1150;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SOPEG_RS05705;old_locus_tag=SOPEG_1073 NZ_CP006568.1 Protein Homology CDS 1099355 1100110 . + 0 ID=cds1131;Parent=gene1150;Dbxref=Genbank:WP_025244616.1;Name=WP_025244616.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine(37)-N(1))-methyltransferase;protein_id=WP_025244616.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1100173 1100520 . + . ID=gene1151;Name=SOPEG_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05710;old_locus_tag=SOPEG_1074 NZ_CP006568.1 Protein Homology CDS 1100173 1100520 . + 0 ID=cds1132;Parent=gene1151;Dbxref=Genbank:WP_025244617.1;Name=WP_025244617.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_025244617.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1100840 1101907 . + . ID=gene1152;Name=SOPEG_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05715 NZ_CP006568.1 GeneMarkS+ CDS 1100840 1101907 . + 0 ID=cds1133;Parent=gene1152;Dbxref=Genbank:WP_025244618.1;Name=WP_025244618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244618.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1101742 1118846 . + . ID=id164;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1101817 1103025 . + . ID=gene1153;Name=SOPEG_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05720;old_locus_tag=SOPEG_1076 NZ_CP006568.1 Protein Homology CDS 1101817 1103025 . + 0 ID=cds1134;Parent=gene1153;Dbxref=Genbank:WP_025244619.1;Name=WP_025244619.1;gbkey=CDS;product=transposase;protein_id=WP_025244619.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1103036 1103326 . - . ID=gene1154;Name=SOPEG_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05725 NZ_CP006568.1 Protein Homology CDS 1103036 1103326 . - 0 ID=cds1135;Parent=gene1154;Dbxref=Genbank:WP_025244358.1;Name=WP_025244358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244358.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1103569 1103644 . - . ID=gene1155;Name=SOPEG_RS05730;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS05730;old_locus_tag=SOPEG_t1078 NZ_CP006568.1 tRNAscan-SE tRNA 1103569 1103644 . - . ID=rna19;Parent=gene1155;anticodon=(pos:complement(1103609..1103611));gbkey=tRNA;product=tRNA-Phe NZ_CP006568.1 tRNAscan-SE exon 1103569 1103644 . - . ID=id165;Parent=rna19;anticodon=(pos:complement(1103609..1103611));gbkey=tRNA;product=tRNA-Phe NZ_CP006568.1 RefSeq gene 1103751 1104326 . - . ID=gene1156;Name=SOPEG_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05735;old_locus_tag=SOPEG_1079 NZ_CP006568.1 Protein Homology CDS 1103751 1104326 . - 0 ID=cds1136;Parent=gene1156;Dbxref=Genbank:WP_025244359.1;Name=WP_025244359.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244359.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1104369 1106087 . - . ID=gene1157;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=SOPEG_RS05740;old_locus_tag=SOPEG_1080 NZ_CP006568.1 Protein Homology CDS 1104369 1106087 . - 0 ID=cds1137;Parent=gene1157;Dbxref=Genbank:WP_025244360.1;Name=WP_025244360.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein precursor;protein_id=WP_025244360.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1106063 1106371 . - . ID=gene1158;Name=SOPEG_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05745;old_locus_tag=SOPEG_1081 NZ_CP006568.1 Protein Homology CDS 1106063 1106371 . - 0 ID=cds1138;Parent=gene1158;Dbxref=Genbank:WP_038469678.1;Name=WP_038469678.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=cation tolerance protein CutA;protein_id=WP_038469678.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1106501 1106704 . - . ID=gene1159;Name=SOPEG_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05750 NZ_CP006568.1 GeneMarkS+ CDS 1106501 1106704 . - 0 ID=cds1139;Parent=gene1159;Dbxref=Genbank:WP_038468191.1;Name=WP_038468191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468191.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1106855 1108075 . + . ID=gene1160;Name=SOPEG_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05755;old_locus_tag=SOPEG_1083 NZ_CP006568.1 Protein Homology CDS 1106855 1108075 . + 0 ID=cds1140;Parent=gene1160;Dbxref=Genbank:WP_025244362.1;Name=WP_025244362.1;gbkey=CDS;product=transposase;protein_id=WP_025244362.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1108461 1109656 . - . ID=gene1161;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=pseudogene;locus_tag=SOPEG_RS05760;partial=true;pseudo=true;start_range=.,1108461 NZ_CP006568.1 Protein Homology CDS 1108461 1109656 . - 0 ID=cds1141;Parent=gene1161;Note=catalyzes the formation of fumarate from aspartate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=aspA;partial=true;product=aspartate ammonia-lyase;pseudo=true;start_range=.,1108461;transl_table=11 NZ_CP006568.1 RefSeq gene 1110009 1110464 . + . ID=gene1162;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=SOPEG_RS05765;old_locus_tag=SOPEG_1084 NZ_CP006568.1 Protein Homology CDS 1110009 1110464 . + 0 ID=cds1142;Parent=gene1162;Dbxref=Genbank:WP_025244363.1;Name=WP_025244363.1;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;gbkey=CDS;gene=fxsA;product=phage T7 F exclusion suppressor FxsA;protein_id=WP_025244363.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1110685 1110978 . + . ID=gene1163;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SOPEG_RS05770;old_locus_tag=SOPEG_1085 NZ_CP006568.1 Protein Homology CDS 1110685 1110978 . + 0 ID=cds1143;Parent=gene1163;Dbxref=Genbank:WP_025244364.1;Name=WP_025244364.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_025244364.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1111024 1112670 . + . ID=gene1164;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SOPEG_RS05775;old_locus_tag=SOPEG_1086 NZ_CP006568.1 Protein Homology CDS 1111024 1112670 . + 0 ID=cds1144;Parent=gene1164;Dbxref=Genbank:WP_025244621.1;Name=WP_025244621.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_025244621.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1112872 1113228 . + . ID=gene1165;Name=SOPEG_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05780;old_locus_tag=SOPEG_1087 NZ_CP006568.1 Protein Homology CDS 1112872 1113228 . + 0 ID=cds1145;Parent=gene1165;Dbxref=Genbank:WP_025244366.1;Name=WP_025244366.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244366.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1113484 1114512 . - . ID=gene1166;Name=SOPEG_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05785;old_locus_tag=SOPEG_1088 NZ_CP006568.1 Protein Homology CDS 1113484 1114512 . - 0 ID=cds1146;Parent=gene1166;Dbxref=Genbank:WP_025244622.1;Name=WP_025244622.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_025244622.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1114554 1115123 . + . ID=gene1167;Name=SOPEG_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05790;old_locus_tag=SOPEG_1089 NZ_CP006568.1 Protein Homology CDS 1114554 1115123 . + 0 ID=cds1147;Parent=gene1167;Dbxref=Genbank:WP_025244368.1;Name=WP_025244368.1;gbkey=CDS;product=elongation factor P;protein_id=WP_025244368.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1115314 1116657 . + . ID=gene1168;Name=SOPEG_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05795 NZ_CP006568.1 Protein Homology CDS 1115314 1116657 . + 0 ID=cds1148;Parent=gene1168;Dbxref=Genbank:WP_025244623.1;Name=WP_025244623.1;gbkey=CDS;product=transposase;protein_id=WP_025244623.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1116703 1117626 . - . ID=gene1169;Name=SOPEG_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05800;old_locus_tag=SOPEG_1092 NZ_CP006568.1 Protein Homology CDS 1116703 1117626 . - 0 ID=cds1149;Parent=gene1169;Dbxref=Genbank:WP_025244624.1;Name=WP_025244624.1;gbkey=CDS;product=transposase;protein_id=WP_025244624.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1117844 1118290 . - . ID=gene1170;Name=SOPEG_RS05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05805;partial=true;pseudo=true;start_range=.,1117844 NZ_CP006568.1 Protein Homology CDS 1117844 1118290 . - 0 ID=cds1150;Parent=gene1170;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1117844;transl_table=11 NZ_CP006568.1 RefSeq gene 1118304 1118768 . - . ID=gene1171;Name=SOPEG_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05810 NZ_CP006568.1 Protein Homology CDS 1118304 1118768 . - 0 ID=cds1151;Parent=gene1171;Dbxref=Genbank:WP_038468310.1;Name=WP_038468310.1;gbkey=CDS;product=transposase;protein_id=WP_038468310.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1119006 1119272 . - . ID=gene1172;Name=SOPEG_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22570;old_locus_tag=SOPEG_ps1094 NZ_CP006568.1 Protein Homology CDS 1119006 1119272 . - 0 ID=cds1152;Parent=gene1172;Dbxref=Genbank:WP_025244625.1;Name=WP_025244625.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244625.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1119106 1119212 . + . ID=id166;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 1119217 1120281 . + . ID=id167;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1119299 1120222 . + . ID=gene1173;Name=SOPEG_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05820;old_locus_tag=SOPEG_1095 NZ_CP006568.1 Protein Homology CDS 1119299 1120222 . + 0 ID=cds1153;Parent=gene1173;Dbxref=Genbank:WP_025244626.1;Name=WP_025244626.1;gbkey=CDS;product=transposase;protein_id=WP_025244626.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1120451 1120927 . - . ID=gene1174;Name=SOPEG_RS05825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05825;partial=true;pseudo=true;start_range=.,1120451 NZ_CP006568.1 Protein Homology CDS 1120451 1120927 . - 0 ID=cds1154;Parent=gene1174;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1120451;transl_table=11 NZ_CP006568.1 RefSeq gene 1120996 1122478 . - . ID=gene1175;Name=SOPEG_RS05830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05830;pseudo=true NZ_CP006568.1 Protein Homology CDS 1120996 1122478 . - 0 ID=cds1155;Parent=gene1175;exception=annotated by transcript or proteomic data;gbkey=CDS;product=3%2C4-dihydroxybenzoate decarboxylase;pseudo=true;transl_except=(pos:complement(1121116..1121118)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1122780 1123843 . + . ID=id168;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1122859 1123782 . + . ID=gene1176;Name=SOPEG_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05835;old_locus_tag=SOPEG_1099 NZ_CP006568.1 Protein Homology CDS 1122859 1123782 . + 0 ID=cds1156;Parent=gene1176;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1124004 1124078 . - . ID=gene1177;Name=SOPEG_RS05840;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS05840;old_locus_tag=SOPEG_t1100 NZ_CP006568.1 tRNAscan-SE tRNA 1124004 1124078 . - . ID=rna20;Parent=gene1177;anticodon=(pos:complement(1124044..1124046));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 tRNAscan-SE exon 1124004 1124078 . - . ID=id169;Parent=rna20;anticodon=(pos:complement(1124044..1124046));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 RefSeq gene 1124227 1124772 . - . ID=gene1178;Name=SOPEG_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05845;old_locus_tag=SOPEG_1101 NZ_CP006568.1 Protein Homology CDS 1124227 1124772 . - 0 ID=cds1157;Parent=gene1178;Dbxref=Genbank:WP_025244628.1;Name=WP_025244628.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_025244628.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1124876 1125904 . + . ID=gene1179;Name=SOPEG_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05850;old_locus_tag=SOPEG_1102 NZ_CP006568.1 Protein Homology CDS 1124876 1125904 . + 0 ID=cds1158;Parent=gene1179;Dbxref=Genbank:WP_025244629.1;Name=WP_025244629.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_025244629.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1125998 1126885 . + . ID=gene1180;Name=SOPEG_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05855;old_locus_tag=SOPEG_1103 NZ_CP006568.1 Protein Homology CDS 1125998 1126885 . + 0 ID=cds1159;Parent=gene1180;Dbxref=Genbank:WP_025244630.1;Name=WP_025244630.1;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=WP_025244630.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1126917 1130237 . + . ID=gene1181;Name=SOPEG_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05860;old_locus_tag=SOPEG_1104 NZ_CP006568.1 Protein Homology CDS 1126917 1130237 . + 0 ID=cds1160;Parent=gene1181;Dbxref=Genbank:WP_025244631.1;Name=WP_025244631.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_025244631.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1130452 1131429 . - . ID=gene1182;Name=SOPEG_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05865;old_locus_tag=SOPEG_1105 NZ_CP006568.1 Protein Homology CDS 1130452 1131429 . - 0 ID=cds1161;Parent=gene1182;Dbxref=Genbank:WP_025244632.1;Name=WP_025244632.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=poxB regulator PoxA;protein_id=WP_025244632.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1133061 1134391 . + . ID=id170;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1133102 1134316 . - . ID=gene1183;Name=SOPEG_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05870;old_locus_tag=SOPEG_1109 NZ_CP006568.1 Protein Homology CDS 1133102 1134316 . - 0 ID=cds1162;Parent=gene1183;Dbxref=Genbank:WP_025244634.1;Name=WP_025244634.1;gbkey=CDS;product=transposase;protein_id=WP_025244634.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1134708 1135649 . - . ID=gene1184;Name=SOPEG_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05875;old_locus_tag=SOPEG_1110 NZ_CP006568.1 Protein Homology CDS 1134708 1135649 . - 0 ID=cds1163;Parent=gene1184;Dbxref=Genbank:WP_025244635.1;Name=WP_025244635.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_025244635.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1135777 1136112 . - . ID=gene1185;Name=SOPEG_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05880 NZ_CP006568.1 GeneMarkS+ CDS 1135777 1136112 . - 0 ID=cds1164;Parent=gene1185;Dbxref=Genbank:WP_038468314.1;Name=WP_038468314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468314.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1136279 1137340 . + . ID=id171;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1136358 1137280 . + . ID=gene1186;Name=SOPEG_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS05885;pseudo=true NZ_CP006568.1 Protein Homology CDS 1136358 1137280 . + 0 ID=cds1165;Parent=gene1186;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1138121 1138948 . + . ID=gene1187;Name=SOPEG_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05890;old_locus_tag=SOPEG_1113 NZ_CP006568.1 Protein Homology CDS 1138121 1138948 . + 0 ID=cds1166;Parent=gene1187;Dbxref=Genbank:WP_025244637.1;Name=WP_025244637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244637.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1139234 1140685 . + . ID=id172;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1139292 1139438 . - . ID=gene1188;Name=SOPEG_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05895 NZ_CP006568.1 Protein Homology CDS 1139292 1139438 . - 0 ID=cds1167;Parent=gene1188;Dbxref=Genbank:WP_038468316.1;Name=WP_038468316.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468316.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1139684 1140607 . - . ID=gene1189;Name=SOPEG_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05905;old_locus_tag=SOPEG_1115 NZ_CP006568.1 Protein Homology CDS 1139684 1140607 . - 0 ID=cds1168;Parent=gene1189;Dbxref=Genbank:WP_038468319.1;Name=WP_038468319.1;gbkey=CDS;product=transposase;protein_id=WP_038468319.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1140805 1141875 . + . ID=id173;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1140869 1141792 . - . ID=gene1190;Name=SOPEG_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05910;old_locus_tag=SOPEG_1116 NZ_CP006568.1 Protein Homology CDS 1140869 1141792 . - 0 ID=cds1169;Parent=gene1190;Dbxref=Genbank:WP_025244639.1;Name=WP_025244639.1;gbkey=CDS;product=transposase;protein_id=WP_025244639.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1143026 1143859 . + . ID=gene1191;Name=SOPEG_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05915;old_locus_tag=SOPEG_1117 NZ_CP006568.1 Protein Homology CDS 1143026 1143859 . + 0 ID=cds1170;Parent=gene1191;Dbxref=Genbank:WP_025244640.1;Name=WP_025244640.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_025244640.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1143936 1144895 . + . ID=gene1192;Name=SOPEG_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05920;old_locus_tag=SOPEG_1118 NZ_CP006568.1 Protein Homology CDS 1143936 1144895 . + 0 ID=cds1171;Parent=gene1192;Dbxref=Genbank:WP_025244641.1;Name=WP_025244641.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244641.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1144927 1145178 . - . ID=gene1193;Name=SOPEG_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05925 NZ_CP006568.1 Protein Homology CDS 1144927 1145178 . - 0 ID=cds1172;Parent=gene1193;Dbxref=Genbank:WP_025244642.1;Name=WP_025244642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244642.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1145270 1145596 . + . ID=gene1194;Name=SOPEG_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05930;old_locus_tag=SOPEG_1120 NZ_CP006568.1 Protein Homology CDS 1145270 1145596 . + 0 ID=cds1173;Parent=gene1194;Dbxref=Genbank:WP_025244643.1;Name=WP_025244643.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244643.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1145693 1145881 . - . ID=gene1195;Name=SOPEG_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05935 NZ_CP006568.1 GeneMarkS+ CDS 1145693 1145881 . - 0 ID=cds1174;Parent=gene1195;Dbxref=Genbank:WP_025244644.1;Name=WP_025244644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244644.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1146123 1146386 . + . ID=gene1196;Name=SOPEG_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05940;old_locus_tag=SOPEG_1121 NZ_CP006568.1 Protein Homology CDS 1146123 1146386 . + 0 ID=cds1175;Parent=gene1196;Dbxref=Genbank:WP_025244645.1;Name=WP_025244645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244645.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1146437 1146670 . + . ID=gene1197;Name=SOPEG_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05945 NZ_CP006568.1 GeneMarkS+ CDS 1146437 1146670 . + 0 ID=cds1176;Parent=gene1197;Dbxref=Genbank:WP_038468324.1;Name=WP_038468324.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468324.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1146687 1146902 . + . ID=gene1198;Name=SOPEG_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05950;old_locus_tag=SOPEG_1122 NZ_CP006568.1 Protein Homology CDS 1146687 1146902 . + 0 ID=cds1177;Parent=gene1198;Dbxref=Genbank:WP_038468327.1;Name=WP_038468327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468327.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1147008 1147640 . - . ID=gene1199;Name=SOPEG_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05955 NZ_CP006568.1 GeneMarkS+ CDS 1147008 1147640 . - 0 ID=cds1178;Parent=gene1199;Dbxref=Genbank:WP_025244647.1;Name=WP_025244647.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244647.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1147574 1149028 . - . ID=gene1200;Name=SOPEG_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05960 NZ_CP006568.1 Protein Homology CDS 1147574 1149028 . - 0 ID=cds1179;Parent=gene1200;Dbxref=Genbank:WP_025244648.1;Name=WP_025244648.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244648.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1149170 1149478 . - . ID=gene1201;Name=SOPEG_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05965 NZ_CP006568.1 GeneMarkS+ CDS 1149170 1149478 . - 0 ID=cds1180;Parent=gene1201;Dbxref=Genbank:WP_038468330.1;Name=WP_038468330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468330.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1149584 1150711 . - . ID=gene1202;Name=SOPEG_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05970 NZ_CP006568.1 GeneMarkS+ CDS 1149584 1150711 . - 0 ID=cds1181;Parent=gene1202;Dbxref=Genbank:WP_025244649.1;Name=WP_025244649.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244649.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1150716 1151807 . - . ID=gene1203;Name=SOPEG_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05975 NZ_CP006568.1 GeneMarkS+ CDS 1150716 1151807 . - 0 ID=cds1182;Parent=gene1203;Dbxref=Genbank:WP_025244650.1;Name=WP_025244650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244650.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1151955 1152272 . - . ID=gene1204;Name=SOPEG_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05980 NZ_CP006568.1 GeneMarkS+ CDS 1151955 1152272 . - 0 ID=cds1183;Parent=gene1204;Dbxref=Genbank:WP_025244651.1;Name=WP_025244651.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244651.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1152290 1152964 . - . ID=gene1205;Name=SOPEG_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05985 NZ_CP006568.1 GeneMarkS+ CDS 1152290 1152964 . - 0 ID=cds1184;Parent=gene1205;Dbxref=Genbank:WP_038468334.1;Name=WP_038468334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468334.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1153014 1153898 . - . ID=gene1206;Name=SOPEG_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05990 NZ_CP006568.1 Protein Homology CDS 1153014 1153898 . - 0 ID=cds1185;Parent=gene1206;Dbxref=Genbank:WP_025244653.1;Name=WP_025244653.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244653.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1153904 1154965 . - . ID=gene1207;Name=SOPEG_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS05995 NZ_CP006568.1 Protein Homology CDS 1153904 1154965 . - 0 ID=cds1186;Parent=gene1207;Dbxref=Genbank:WP_025244654.1;Name=WP_025244654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244654.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1154878 1156857 . - . ID=gene1208;Name=SOPEG_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06000 NZ_CP006568.1 GeneMarkS+ CDS 1154878 1156857 . - 0 ID=cds1187;Parent=gene1208;Dbxref=Genbank:WP_025244655.1;Name=WP_025244655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244655.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1156970 1157944 . - . ID=gene1209;Name=SOPEG_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06005 NZ_CP006568.1 Protein Homology CDS 1156970 1157944 . - 0 ID=cds1188;Parent=gene1209;Dbxref=Genbank:WP_025244656.1;Name=WP_025244656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244656.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1158691 1159545 . + . ID=gene1210;Name=SOPEG_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06010;old_locus_tag=SOPEG_1125 NZ_CP006568.1 Protein Homology CDS 1158691 1159545 . + 0 ID=cds1189;Parent=gene1210;Dbxref=Genbank:WP_025244657.1;Name=WP_025244657.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_025244657.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1159902 1160090 . + . ID=gene1211;Name=SOPEG_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06015 NZ_CP006568.1 Protein Homology CDS 1159902 1160090 . + 0 ID=cds1190;Parent=gene1211;Dbxref=Genbank:WP_038469690.1;Name=WP_038469690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469690.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1160334 1160717 . + . ID=gene1212;Name=SOPEG_RS06020;end_range=1160717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06020;old_locus_tag=SOPEG_1127;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1160334 1160717 . + 0 ID=cds1191;Parent=gene1212;end_range=1160717,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1160833 1163414 . + . ID=id174;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1161014 1162531 . + . ID=gene1213;Name=SOPEG_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06025;old_locus_tag=SOPEG_1128 NZ_CP006568.1 Protein Homology CDS 1161014 1162531 . + 0 ID=cds1192;Parent=gene1213;Dbxref=Genbank:WP_025244660.1;Name=WP_025244660.1;gbkey=CDS;product=transposase;protein_id=WP_025244660.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1162543 1163292 . + . ID=gene1214;Name=SOPEG_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06030;old_locus_tag=SOPEG_1129 NZ_CP006568.1 Protein Homology CDS 1162543 1163292 . + 0 ID=cds1193;Parent=gene1214;Dbxref=Genbank:WP_025244661.1;Name=WP_025244661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244661.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1163932 1164855 . + . ID=gene1215;Name=SOPEG_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06035;old_locus_tag=SOPEG_1130 NZ_CP006568.1 Protein Homology CDS 1163932 1164855 . + 0 ID=cds1194;Parent=gene1215;Dbxref=Genbank:WP_025244662.1;Name=WP_025244662.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_025244662.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1165187 1165953 . + . ID=gene1216;Name=SOPEG_RS06040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06040;pseudo=true NZ_CP006568.1 Protein Homology CDS 1165187 1165953 . + 0 ID=cds1195;Parent=gene1216;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1165738..1165740%2Caa:Other);transl_table=11 NZ_CP006568.1 cmsearch region 1166264 1166661 . + . ID=id175;Note=cspA;gbkey=misc_feature NZ_CP006568.1 RefSeq gene 1166408 1166617 . + . ID=gene1217;Name=SOPEG_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06045;old_locus_tag=SOPEG_1132 NZ_CP006568.1 Protein Homology CDS 1166408 1166617 . + 0 ID=cds1196;Parent=gene1217;Dbxref=Genbank:WP_025244663.1;Name=WP_025244663.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_025244663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1166738 1167121 . - . ID=gene1218;Name=SOPEG_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06050;old_locus_tag=SOPEG_1133 NZ_CP006568.1 Protein Homology CDS 1166738 1167121 . - 0 ID=cds1197;Parent=gene1218;Dbxref=Genbank:WP_025244664.1;Name=WP_025244664.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_025244664.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1167433 1167633 . + . ID=gene1219;Name=SOPEG_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06055;old_locus_tag=SOPEG_1134 NZ_CP006568.1 Protein Homology CDS 1167433 1167633 . + 0 ID=cds1198;Parent=gene1219;Dbxref=Genbank:WP_025244665.1;Name=WP_025244665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244665.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1167701 1168666 . - . ID=gene1220;Name=SOPEG_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06060;old_locus_tag=SOPEG_1135 NZ_CP006568.1 Protein Homology CDS 1167701 1168666 . - 0 ID=cds1199;Parent=gene1220;Dbxref=Genbank:WP_025244666.1;Name=WP_025244666.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_025244666.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1168845 1169510 . - . ID=gene1221;Name=SOPEG_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06065;old_locus_tag=SOPEG_1136 NZ_CP006568.1 Protein Homology CDS 1168845 1169510 . - 0 ID=cds1200;Parent=gene1221;Dbxref=Genbank:WP_038468338.1;Name=WP_038468338.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=lipoate--protein ligase;protein_id=WP_038468338.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1169519 1169782 . - . ID=gene1222;Name=SOPEG_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06070;old_locus_tag=SOPEG_1137 NZ_CP006568.1 Protein Homology CDS 1169519 1169782 . - 0 ID=cds1201;Parent=gene1222;Dbxref=Genbank:WP_025244668.1;Name=WP_025244668.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244668.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1169912 1171123 . - . ID=gene1223;Name=SOPEG_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06075;old_locus_tag=SOPEG_1138 NZ_CP006568.1 Protein Homology CDS 1169912 1171123 . - 0 ID=cds1202;Parent=gene1223;Dbxref=Genbank:WP_025244669.1;Name=WP_025244669.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_025244669.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1171398 1171859 . - . ID=gene1224;Name=SOPEG_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06080 NZ_CP006568.1 Protein Homology CDS 1171398 1171859 . - 0 ID=cds1203;Parent=gene1224;Dbxref=Genbank:WP_025244670.1;Name=WP_025244670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244670.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1172034 1173146 . - . ID=gene1225;Name=SOPEG_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06085;old_locus_tag=SOPEG_1140 NZ_CP006568.1 Protein Homology CDS 1172034 1173146 . - 0 ID=cds1204;Parent=gene1225;Dbxref=Genbank:WP_025244671.1;Name=WP_025244671.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_025244671.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1173153 1175057 . - . ID=gene1226;Name=SOPEG_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06090;old_locus_tag=SOPEG_1141 NZ_CP006568.1 Protein Homology CDS 1173153 1175057 . - 0 ID=cds1205;Parent=gene1226;Dbxref=Genbank:WP_025244672.1;Name=WP_025244672.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_025244672.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1175095 1175565 . - . ID=gene1227;Name=SOPEG_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06095;old_locus_tag=SOPEG_1142 NZ_CP006568.1 Protein Homology CDS 1175095 1175565 . - 0 ID=cds1206;Parent=gene1227;Dbxref=Genbank:WP_025244673.1;Name=WP_025244673.1;gbkey=CDS;product=50S rRNA methyltransferase;protein_id=WP_025244673.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1175569 1175874 . - . ID=gene1228;Name=SOPEG_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06100 NZ_CP006568.1 Protein Homology CDS 1175569 1175874 . - 0 ID=cds1207;Parent=gene1228;Dbxref=Genbank:WP_038468341.1;Name=WP_038468341.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_038468341.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1176054 1176707 . - . ID=gene1229;Name=SOPEG_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06105;old_locus_tag=SOPEG_1144 NZ_CP006568.1 Protein Homology CDS 1176054 1176707 . - 0 ID=cds1208;Parent=gene1229;Dbxref=Genbank:WP_025244675.1;Name=WP_025244675.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_025244675.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1176700 1177731 . - . ID=gene1230;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06110;old_locus_tag=SOPEG_1145 NZ_CP006568.1 Protein Homology CDS 1176700 1177731 . - 0 ID=cds1209;Parent=gene1230;Dbxref=Genbank:WP_025244676.1;Name=WP_025244676.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_025244676.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1177766 1178344 . - . ID=gene1231;Name=SOPEG_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06115;old_locus_tag=SOPEG_1146 NZ_CP006568.1 Protein Homology CDS 1177766 1178344 . - 0 ID=cds1210;Parent=gene1231;Dbxref=Genbank:WP_025244677.1;Name=WP_025244677.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_025244677.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1178359 1180941 . - . ID=gene1232;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SOPEG_RS06120;old_locus_tag=SOPEG_1147 NZ_CP006568.1 Protein Homology CDS 1178359 1180941 . - 0 ID=cds1211;Parent=gene1232;Dbxref=Genbank:WP_025244678.1;Name=WP_025244678.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=WP_025244678.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1181211 1181690 . + . ID=gene1233;Name=SOPEG_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06125;old_locus_tag=SOPEG_1148 NZ_CP006568.1 Protein Homology CDS 1181211 1181690 . + 0 ID=cds1212;Parent=gene1233;Dbxref=Genbank:WP_025244679.1;Name=WP_025244679.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244679.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1181953 1182678 . - . ID=gene1234;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=SOPEG_RS06130;old_locus_tag=SOPEG_1149 NZ_CP006568.1 Protein Homology CDS 1181953 1182678 . - 0 ID=cds1213;Parent=gene1234;Dbxref=Genbank:WP_025244680.1;Name=WP_025244680.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine transporter ATP-binding subunit;protein_id=WP_025244680.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1182675 1183352 . - . ID=gene1235;Name=SOPEG_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06135;old_locus_tag=SOPEG_1150 NZ_CP006568.1 Protein Homology CDS 1182675 1183352 . - 0 ID=cds1214;Parent=gene1235;Dbxref=Genbank:WP_025244681.1;Name=WP_025244681.1;Note=with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_025244681.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1183352 1184095 . - . ID=gene1236;Name=SOPEG_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06140;old_locus_tag=SOPEG_1151 NZ_CP006568.1 Protein Homology CDS 1183352 1184095 . - 0 ID=cds1215;Parent=gene1236;Dbxref=Genbank:WP_025244682.1;Name=WP_025244682.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_025244682.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1184251 1185153 . - . ID=gene1237;Name=SOPEG_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06145;old_locus_tag=SOPEG_1152 NZ_CP006568.1 Protein Homology CDS 1184251 1185153 . - 0 ID=cds1216;Parent=gene1237;Dbxref=Genbank:WP_025244683.1;Name=WP_025244683.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_025244683.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1185159 1190293 . + . ID=id176;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1185267 1186025 . - . ID=gene1238;Name=SOPEG_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06150;old_locus_tag=SOPEG_1153 NZ_CP006568.1 Protein Homology CDS 1185267 1186025 . - 0 ID=cds1217;Parent=gene1238;Dbxref=Genbank:WP_038468165.1;Name=WP_038468165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468165.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1186374 1187861 . + . ID=gene1239;Name=SOPEG_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06155 NZ_CP006568.1 Protein Homology CDS 1186374 1187861 . + 0 ID=cds1218;Parent=gene1239;Dbxref=Genbank:WP_038468345.1;Name=WP_038468345.1;gbkey=CDS;product=transposase;protein_id=WP_038468345.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1187903 1188652 . + . ID=gene1240;Name=SOPEG_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06160;old_locus_tag=SOPEG_1155 NZ_CP006568.1 Protein Homology CDS 1187903 1188652 . + 0 ID=cds1219;Parent=gene1240;Dbxref=Genbank:WP_025244685.1;Name=WP_025244685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244685.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1188826 1190013 . + . ID=gene1241;Name=SOPEG_RS06165;end_range=1190013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06165;old_locus_tag=SOPEG_1156;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1188826 1190013 . + 0 ID=cds1220;Parent=gene1241;end_range=1190013,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1190045 1190251 . - . ID=gene1242;Name=SOPEG_RS06170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06170;pseudo=true NZ_CP006568.1 GeneMarkS+ CDS 1190045 1190251 . - 0 ID=cds1221;Parent=gene1242;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1190243..1190245)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1190163 1191149 . + . ID=gene1243;Name=SOPEG_RS06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06175;pseudo=true NZ_CP006568.1 Protein Homology CDS 1190163 1191149 . + 0 ID=cds1222;Parent=gene1243;gbkey=CDS;product=methylthioribose-1-phosphate isomerase;pseudo=true;transl_except=(pos:1190244..1190246%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1191323 1191868 . - . ID=gene1244;Name=SOPEG_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06180;old_locus_tag=SOPEG_1158 NZ_CP006568.1 Protein Homology CDS 1191323 1191868 . - 0 ID=cds1223;Parent=gene1244;Dbxref=Genbank:WP_025244687.1;Name=WP_025244687.1;gbkey=CDS;product=acireductone dioxygenase;protein_id=WP_025244687.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1191868 1192554 . - . ID=gene1245;Name=SOPEG_RS06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06185;pseudo=true NZ_CP006568.1 Protein Homology CDS 1191868 1192554 . - 0 ID=cds1224;Parent=gene1245;gbkey=CDS;product=haloacid dehalogenase;pseudo=true;transl_except=(pos:complement(1192072..1192074)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1192551 1193165 . - . ID=gene1246;Name=SOPEG_RS06190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06190;pseudo=true NZ_CP006568.1 Protein Homology CDS 1192551 1193165 . - 0 ID=cds1225;Parent=gene1246;Note=catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway;gbkey=CDS;product=methylthioribulose-1-phosphate dehydratase;pseudo=true;transl_except=(pos:complement(1192917..1192919)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1193725 1195620 . - . ID=gene1247;Name=SOPEG_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06195;old_locus_tag=SOPEG_1161 NZ_CP006568.1 Protein Homology CDS 1193725 1195620 . - 0 ID=cds1226;Parent=gene1247;Dbxref=Genbank:WP_025244688.1;Name=WP_025244688.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_025244688.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1195715 1196296 . - . ID=gene1248;Name=SOPEG_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06200;old_locus_tag=SOPEG_1162 NZ_CP006568.1 Protein Homology CDS 1195715 1196296 . - 0 ID=cds1227;Parent=gene1248;Dbxref=Genbank:WP_025244689.1;Name=WP_025244689.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_025244689.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1196296 1197123 . - . ID=gene1249;Name=SOPEG_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06205;old_locus_tag=SOPEG_1163 NZ_CP006568.1 Protein Homology CDS 1196296 1197123 . - 0 ID=cds1228;Parent=gene1249;Dbxref=Genbank:WP_025244690.1;Name=WP_025244690.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_025244690.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1197151 1197576 . - . ID=gene1250;Name=SOPEG_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06210;old_locus_tag=SOPEG_1164 NZ_CP006568.1 Protein Homology CDS 1197151 1197576 . - 0 ID=cds1229;Parent=gene1250;Dbxref=Genbank:WP_025244691.1;Name=WP_025244691.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_025244691.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1197576 1198208 . - . ID=gene1251;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=SOPEG_RS06215;old_locus_tag=SOPEG_1165 NZ_CP006568.1 Protein Homology CDS 1197576 1198208 . - 0 ID=cds1230;Parent=gene1251;Dbxref=Genbank:WP_025244692.1;Name=WP_025244692.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_025244692.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1198413 1199861 . + . ID=gene1252;Name=SOPEG_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06220;old_locus_tag=SOPEG_1166 NZ_CP006568.1 Protein Homology CDS 1198413 1199861 . + 0 ID=cds1231;Parent=gene1252;Dbxref=Genbank:WP_025244693.1;Name=WP_025244693.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244693.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1199965 1200600 . + . ID=gene1253;Name=SOPEG_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06225;old_locus_tag=SOPEG_1167 NZ_CP006568.1 Protein Homology CDS 1199965 1200600 . + 0 ID=cds1232;Parent=gene1253;Dbxref=Genbank:WP_038468348.1;Name=WP_038468348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468348.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1200607 1201770 . + . ID=gene1254;Name=SOPEG_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06230;old_locus_tag=SOPEG_1168 NZ_CP006568.1 Protein Homology CDS 1200607 1201770 . + 0 ID=cds1233;Parent=gene1254;Dbxref=Genbank:WP_025244695.1;Name=WP_025244695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244695.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1201805 1202588 . - . ID=gene1255;Name=SOPEG_RS06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06235;pseudo=true NZ_CP006568.1 Protein Homology CDS 1201805 1202588 . - 0 ID=cds1234;Parent=gene1255;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dioxygenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1202718 1203411 . + . ID=gene1256;Name=SOPEG_RS06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06240;pseudo=true NZ_CP006568.1 Protein Homology CDS 1202718 1203411 . + 0 ID=cds1235;Parent=gene1256;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1202961..1202963%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1203432 1204085 . - . ID=gene1257;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=SOPEG_RS06245;old_locus_tag=SOPEG_1171 NZ_CP006568.1 Protein Homology CDS 1203432 1204085 . - 0 ID=cds1236;Parent=gene1257;Dbxref=Genbank:WP_025244696.1;Name=WP_025244696.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_025244696.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1204447 1204860 . + . ID=gene1258;Name=SOPEG_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06250;old_locus_tag=SOPEG_1172 NZ_CP006568.1 Protein Homology CDS 1204447 1204860 . + 0 ID=cds1237;Parent=gene1258;Dbxref=Genbank:WP_025244697.1;Name=WP_025244697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244697.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1204953 1206386 . - . ID=gene1259;Name=SOPEG_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06255;old_locus_tag=SOPEG_1173 NZ_CP006568.1 Protein Homology CDS 1204953 1206386 . - 0 ID=cds1238;Parent=gene1259;Dbxref=Genbank:WP_025244698.1;Name=WP_025244698.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=heptose 1-phosphate adenyltransferase;protein_id=WP_025244698.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1206582 1209384 . - . ID=gene1260;Name=SOPEG_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06260;pseudo=true NZ_CP006568.1 Protein Homology CDS 1206582 1209384 . - 0 ID=cds1239;Parent=gene1260;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;exception=annotated by transcript or proteomic data;gbkey=CDS;product=bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase;pseudo=true;transl_except=(pos:complement(1209229..1209231)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1209452 1210747 . - . ID=gene1261;Name=SOPEG_RS06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06265;pseudo=true NZ_CP006568.1 Protein Homology CDS 1209452 1210747 . - 0 ID=cds1240;Parent=gene1261;gbkey=CDS;product=adenylate cyclase;pseudo=true;transl_except=(pos:complement(1210571..1210573)%2Caa:Other),(pos:complement(1209521..1209523)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1211151 1211771 . + . ID=gene1262;Name=SOPEG_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06270;old_locus_tag=SOPEG_1176 NZ_CP006568.1 Protein Homology CDS 1211151 1211771 . + 0 ID=cds1241;Parent=gene1262;Dbxref=Genbank:WP_025244699.1;Name=WP_025244699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244699.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1211873 1213120 . + . ID=gene1263;Name=SOPEG_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06275;old_locus_tag=SOPEG_1177 NZ_CP006568.1 Protein Homology CDS 1211873 1213120 . + 0 ID=cds1242;Parent=gene1263;Dbxref=Genbank:WP_025244700.1;Name=WP_025244700.1;gbkey=CDS;product=tRNA nucleotidyl transferase;protein_id=WP_025244700.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1213343 1213666 . - . ID=gene1264;Name=SOPEG_RS06280;end_range=1213666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06280;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1213343 1213666 . - 0 ID=cds1243;Parent=gene1264;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;end_range=1213666,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=UDP pyrophosphate phosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1213663 1214984 . + . ID=id177;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1213739 1214947 . + . ID=gene1265;Name=SOPEG_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06285;old_locus_tag=SOPEG_1179 NZ_CP006568.1 Protein Homology CDS 1213739 1214947 . + 0 ID=cds1244;Parent=gene1265;Dbxref=Genbank:WP_025244702.1;Name=WP_025244702.1;gbkey=CDS;product=transposase;protein_id=WP_025244702.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1214981 1215487 . - . ID=gene1266;Name=SOPEG_RS06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06290;partial=true;pseudo=true;start_range=.,1214981 NZ_CP006568.1 Protein Homology CDS 1214981 1215487 . - 0 ID=cds1245;Parent=gene1266;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;partial=true;product=UDP pyrophosphate phosphatase;pseudo=true;start_range=.,1214981;transl_except=(pos:complement(1215155..1215157)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1215628 1215987 . - . ID=gene1267;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=SOPEG_RS06295;old_locus_tag=SOPEG_1180 NZ_CP006568.1 Protein Homology CDS 1215628 1215987 . - 0 ID=cds1246;Parent=gene1267;Dbxref=Genbank:WP_025244703.1;Name=WP_025244703.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=WP_025244703.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1216093 1216722 . + . ID=gene1268;Name=SOPEG_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06300;old_locus_tag=SOPEG_1181 NZ_CP006568.1 Protein Homology CDS 1216093 1216722 . + 0 ID=cds1247;Parent=gene1268;Dbxref=Genbank:WP_025244704.1;Name=WP_025244704.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_025244704.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1216769 1217788 . - . ID=gene1269;Name=SOPEG_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06305;old_locus_tag=SOPEG_1182 NZ_CP006568.1 Protein Homology CDS 1216769 1217788 . - 0 ID=cds1248;Parent=gene1269;Dbxref=Genbank:WP_025244705.1;Name=WP_025244705.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine modification protein TsaD;protein_id=WP_025244705.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1218240 1218455 . + . ID=gene1270;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SOPEG_RS06310;old_locus_tag=SOPEG_1183 NZ_CP006568.1 Protein Homology CDS 1218240 1218455 . + 0 ID=cds1249;Parent=gene1270;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1218583 1220331 . + . ID=gene1271;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SOPEG_RS06315;old_locus_tag=SOPEG_1184 NZ_CP006568.1 Protein Homology CDS 1218583 1220331 . + 0 ID=cds1250;Parent=gene1271;Dbxref=Genbank:WP_025244706.1;Name=WP_025244706.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_025244706.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1220483 1222330 . + . ID=gene1272;Name=SOPEG_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06320;old_locus_tag=SOPEG_1185 NZ_CP006568.1 Protein Homology CDS 1220483 1222330 . + 0 ID=cds1251;Parent=gene1272;Dbxref=Genbank:WP_025244707.1;Name=WP_025244707.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_025244707.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1222448 1222949 . - . ID=gene1273;Name=SOPEG_RS06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06325;pseudo=true NZ_CP006568.1 Protein Homology CDS 1222448 1222949 . - 0 ID=cds1252;Parent=gene1273;exception=annotated by transcript or proteomic data;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1223089 1223164 . + . ID=gene1274;Name=SOPEG_RS06330;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS06330;old_locus_tag=SOPEG_t1187 NZ_CP006568.1 tRNAscan-SE tRNA 1223089 1223164 . + . ID=rna21;Parent=gene1274;anticodon=(pos:1223122..1223124);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 tRNAscan-SE exon 1223089 1223164 . + . ID=id178;Parent=rna21;anticodon=(pos:1223122..1223124);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 RefSeq gene 1224050 1225666 . - . ID=gene1275;Name=SOPEG_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06335;old_locus_tag=SOPEG_1188 NZ_CP006568.1 Protein Homology CDS 1224050 1225666 . - 0 ID=cds1253;Parent=gene1275;Dbxref=Genbank:WP_025244708.1;Name=WP_025244708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244708.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1224169 1227095 . + . ID=id179;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1225671 1226210 . - . ID=gene1276;Name=SOPEG_RS06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06340;pseudo=true NZ_CP006568.1 Protein Homology CDS 1225671 1226210 . - 0 ID=cds1254;Parent=gene1276;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1226109..1226111)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1226185 1226907 . - . ID=gene1277;Name=SOPEG_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06345;old_locus_tag=SOPEG_1189 NZ_CP006568.1 Protein Homology CDS 1226185 1226907 . - 0 ID=cds1255;Parent=gene1277;Dbxref=Genbank:WP_025244709.1;Name=WP_025244709.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244709.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1226907 1227323 . - . ID=gene1278;Name=SOPEG_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06350;old_locus_tag=SOPEG_1190 NZ_CP006568.1 Protein Homology CDS 1226907 1227323 . - 0 ID=cds1256;Parent=gene1278;Dbxref=Genbank:WP_051419997.1;Name=WP_051419997.1;gbkey=CDS;product=phage tail protein;protein_id=WP_051419997.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1227132 1228492 . + . ID=id180;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1227488 1228411 . - . ID=gene1279;Name=SOPEG_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06355;old_locus_tag=SOPEG_1191 NZ_CP006568.1 Protein Homology CDS 1227488 1228411 . - 0 ID=cds1257;Parent=gene1279;Dbxref=Genbank:WP_025244711.1;Name=WP_025244711.1;gbkey=CDS;product=transposase;protein_id=WP_025244711.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1228476 1229615 . - . ID=gene1280;Name=SOPEG_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06360 NZ_CP006568.1 Protein Homology CDS 1228476 1229615 . - 0 ID=cds1258;Parent=gene1280;Dbxref=Genbank:WP_025244712.1;Name=WP_025244712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244712.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1229565 1230625 . + . ID=id181;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1229642 1230565 . + . ID=gene1281;Name=SOPEG_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06365;old_locus_tag=SOPEG_1193 NZ_CP006568.1 Protein Homology CDS 1229642 1230565 . + 0 ID=cds1259;Parent=gene1281;Dbxref=Genbank:WP_025244713.1;Name=WP_025244713.1;gbkey=CDS;product=transposase;protein_id=WP_025244713.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1230970 1231284 . - . ID=gene1282;Name=SOPEG_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06370 NZ_CP006568.1 Protein Homology CDS 1230970 1231284 . - 0 ID=cds1260;Parent=gene1282;Dbxref=Genbank:WP_038468360.1;Name=WP_038468360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468360.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1231397 1231632 . + . ID=id182;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1231458 1231598 . - . ID=gene1283;Name=SOPEG_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06375 NZ_CP006568.1 Protein Homology CDS 1231458 1231598 . - 0 ID=cds1261;Parent=gene1283;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1231637 1232944 . + . ID=id183;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1232486 1232867 . - . ID=gene1284;Name=SOPEG_RS06380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06380;partial=true;pseudo=true;start_range=.,1232486 NZ_CP006568.1 Protein Homology CDS 1232486 1232867 . - 0 ID=cds1262;Parent=gene1284;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1232486;transl_table=11 NZ_CP006568.1 RefSeq gene 1232965 1233240 . - . ID=gene1285;Name=SOPEG_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06385 NZ_CP006568.1 Protein Homology CDS 1232965 1233240 . - 0 ID=cds1263;Parent=gene1285;Dbxref=Genbank:WP_025244715.1;Name=WP_025244715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244715.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1233578 1234486 . - . ID=gene1286;Name=SOPEG_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06390;old_locus_tag=SOPEG_1198 NZ_CP006568.1 Protein Homology CDS 1233578 1234486 . - 0 ID=cds1264;Parent=gene1286;Dbxref=Genbank:WP_025244716.1;Name=WP_025244716.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244716.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1234611 1235123 . + . ID=gene1287;Name=SOPEG_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06395;old_locus_tag=SOPEG_1199 NZ_CP006568.1 Protein Homology CDS 1234611 1235123 . + 0 ID=cds1265;Parent=gene1287;Dbxref=Genbank:WP_025244717.1;Name=WP_025244717.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_025244717.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1235224 1236573 . - . ID=gene1288;Name=SOPEG_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06400;old_locus_tag=SOPEG_1200 NZ_CP006568.1 Protein Homology CDS 1235224 1236573 . - 0 ID=cds1266;Parent=gene1288;Dbxref=Genbank:WP_025244718.1;Name=WP_025244718.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_025244718.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1236954 1237028 . + . ID=gene1289;Name=SOPEG_RS06405;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS06405;old_locus_tag=SOPEG_t1201 NZ_CP006568.1 tRNAscan-SE tRNA 1236954 1237028 . + . ID=rna22;Parent=gene1289;anticodon=(pos:1236986..1236988);gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 tRNAscan-SE exon 1236954 1237028 . + . ID=id184;Parent=rna22;anticodon=(pos:1236986..1236988);gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 RefSeq repeat_region 1237241 1238309 . + . ID=id185;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1237321 1238246 . + . ID=gene1290;Name=SOPEG_RS06410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06410;pseudo=true NZ_CP006568.1 Protein Homology CDS 1237321 1238246 . + 0 ID=cds1267;Parent=gene1290;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1239040 1240036 . - . ID=gene1291;Name=SOPEG_RS06415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06415;pseudo=true NZ_CP006568.1 Protein Homology CDS 1239040 1240036 . - 0 ID=cds1268;Parent=gene1291;exception=annotated by transcript or proteomic data;gbkey=CDS;product=[Fe-S]-binding protein;pseudo=true;transl_except=(pos:complement(1239962..1239964)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1240035 1241549 . + . ID=gene1292;Name=SOPEG_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06420;old_locus_tag=SOPEG_1204 NZ_CP006568.1 Protein Homology CDS 1240035 1241549 . + 0 ID=cds1269;Parent=gene1292;Dbxref=Genbank:WP_025244719.1;Name=WP_025244719.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_025244719.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1241559 1242038 . + . ID=gene1293;Name=SOPEG_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06425;old_locus_tag=SOPEG_1205 NZ_CP006568.1 Protein Homology CDS 1241559 1242038 . + 0 ID=cds1270;Parent=gene1293;Dbxref=Genbank:WP_025244720.1;Name=WP_025244720.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_025244720.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1242038 1243696 . + . ID=gene1294;Name=SOPEG_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06430;old_locus_tag=SOPEG_1206 NZ_CP006568.1 Protein Homology CDS 1242038 1243696 . + 0 ID=cds1271;Parent=gene1294;Dbxref=Genbank:WP_038469696.1;Name=WP_038469696.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038469696.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1243717 1245495 . + . ID=gene1295;Name=SOPEG_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06435;old_locus_tag=SOPEG_1207 NZ_CP006568.1 Protein Homology CDS 1243717 1245495 . + 0 ID=cds1272;Parent=gene1295;Dbxref=Genbank:WP_025244722.1;Name=WP_025244722.1;gbkey=CDS;product=DNA mismatch repair protein;protein_id=WP_025244722.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1245488 1246429 . + . ID=gene1296;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06440;old_locus_tag=SOPEG_1208 NZ_CP006568.1 Protein Homology CDS 1245488 1246429 . + 0 ID=cds1273;Parent=gene1296;Dbxref=Genbank:WP_025244723.1;Name=WP_025244723.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_025244723.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1246543 1246848 . + . ID=gene1297;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=SOPEG_RS06445;old_locus_tag=SOPEG_1209 NZ_CP006568.1 Protein Homology CDS 1246543 1246848 . + 0 ID=cds1274;Parent=gene1297;Dbxref=Genbank:WP_025244724.1;Name=WP_025244724.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_025244724.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1246945 1248219 . + . ID=gene1298;Name=SOPEG_RS06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06450;pseudo=true NZ_CP006568.1 Protein Homology CDS 1246945 1248219 . + 0 ID=cds1275;Parent=gene1298;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GTPase HflX;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1248279 1249544 . + . ID=gene1299;Name=SOPEG_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06455;old_locus_tag=SOPEG_1211 NZ_CP006568.1 Protein Homology CDS 1248279 1249544 . + 0 ID=cds1276;Parent=gene1299;Dbxref=Genbank:WP_025244725.1;Name=WP_025244725.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_025244725.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1249548 1250564 . + . ID=gene1300;Name=SOPEG_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06460;old_locus_tag=SOPEG_1212 NZ_CP006568.1 Protein Homology CDS 1249548 1250564 . + 0 ID=cds1277;Parent=gene1300;Dbxref=Genbank:WP_025244726.1;Name=WP_025244726.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_025244726.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1252013 1253353 . + . ID=id186;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1252088 1253315 . + . ID=gene1301;Name=SOPEG_RS06465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06465;pseudo=true NZ_CP006568.1 Protein Homology CDS 1252088 1253315 . + 0 ID=cds1278;Parent=gene1301;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1254132 1254332 . + . ID=gene1302;Name=SOPEG_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06470 NZ_CP006568.1 GeneMarkS+ CDS 1254132 1254332 . + 0 ID=cds1279;Parent=gene1302;Dbxref=Genbank:WP_038468364.1;Name=WP_038468364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468364.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1254372 1254572 . + . ID=gene1303;Name=SOPEG_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06475;old_locus_tag=SOPEG_1216 NZ_CP006568.1 Protein Homology CDS 1254372 1254572 . + 0 ID=cds1280;Parent=gene1303;Dbxref=Genbank:WP_025244728.1;Name=WP_025244728.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244728.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1254651 1255949 . + . ID=gene1304;Name=SOPEG_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06480;old_locus_tag=SOPEG_1217 NZ_CP006568.1 Protein Homology CDS 1254651 1255949 . + 0 ID=cds1281;Parent=gene1304;Dbxref=Genbank:WP_025244729.1;Name=WP_025244729.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_025244729.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1256073 1256267 . - . ID=gene1305;Name=SOPEG_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06485 NZ_CP006568.1 GeneMarkS+ CDS 1256073 1256267 . - 0 ID=cds1282;Parent=gene1305;Dbxref=Genbank:WP_038468367.1;Name=WP_038468367.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468367.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1256384 1258909 . + . ID=gene1306;Name=SOPEG_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06490;old_locus_tag=SOPEG_1218 NZ_CP006568.1 Protein Homology CDS 1256384 1258909 . + 0 ID=cds1283;Parent=gene1306;Dbxref=Genbank:WP_025244730.1;Name=WP_025244730.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_025244730.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1258981 1259712 . + . ID=gene1307;Name=SOPEG_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06495;old_locus_tag=SOPEG_1219 NZ_CP006568.1 Protein Homology CDS 1258981 1259712 . + 0 ID=cds1284;Parent=gene1307;Dbxref=Genbank:WP_025244731.1;Name=WP_025244731.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_025244731.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1259990 1260229 . - . ID=gene1308;Name=SOPEG_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06500 NZ_CP006568.1 Protein Homology CDS 1259990 1260229 . - 0 ID=cds1285;Parent=gene1308;Dbxref=Genbank:WP_051419505.1;Name=WP_051419505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419505.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1260416 1261165 . + . ID=gene1309;Name=SOPEG_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06505;old_locus_tag=SOPEG_1221 NZ_CP006568.1 Protein Homology CDS 1260416 1261165 . + 0 ID=cds1286;Parent=gene1309;Dbxref=Genbank:WP_025244732.1;Name=WP_025244732.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_025244732.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1261352 1261747 . + . ID=gene1310;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SOPEG_RS06510;old_locus_tag=SOPEG_1222 NZ_CP006568.1 Protein Homology CDS 1261352 1261747 . + 0 ID=cds1287;Parent=gene1310;Dbxref=Genbank:WP_025244733.1;Name=WP_025244733.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_025244733.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1261754 1262071 . + . ID=gene1311;Name=SOPEG_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06515;old_locus_tag=SOPEG_1223 NZ_CP006568.1 Protein Homology CDS 1261754 1262071 . + 0 ID=cds1288;Parent=gene1311;Dbxref=Genbank:WP_038468371.1;Name=WP_038468371.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein N;protein_id=WP_038468371.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1262076 1262303 . + . ID=gene1312;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SOPEG_RS06520;old_locus_tag=SOPEG_1224 NZ_CP006568.1 Protein Homology CDS 1262076 1262303 . + 0 ID=cds1289;Parent=gene1312;Dbxref=Genbank:WP_005974788.1;Name=WP_005974788.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_005974788.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1262342 1262794 . + . ID=gene1313;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SOPEG_RS06525;old_locus_tag=SOPEG_1225 NZ_CP006568.1 Protein Homology CDS 1262342 1262794 . + 0 ID=cds1290;Parent=gene1313;Dbxref=Genbank:WP_025244735.1;Name=WP_025244735.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_025244735.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1262855 1265439 . + . ID=id187;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1263035 1264555 . + . ID=gene1314;Name=SOPEG_RS06530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06530;pseudo=true NZ_CP006568.1 Protein Homology CDS 1263035 1264555 . + 0 ID=cds1291;Parent=gene1314;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1263398..1263400%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1264567 1265316 . + . ID=gene1315;Name=SOPEG_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06535;old_locus_tag=SOPEG_1227 NZ_CP006568.1 Protein Homology CDS 1264567 1265316 . + 0 ID=cds1292;Parent=gene1315;Dbxref=Genbank:WP_025244736.1;Name=WP_025244736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244736.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1265530 1266372 . - . ID=gene1316;Name=SOPEG_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22575;old_locus_tag=SOPEG_1228 NZ_CP006568.1 Protein Homology CDS 1265530 1266372 . - 0 ID=cds1293;Parent=gene1316;Dbxref=Genbank:WP_025244737.1;Name=WP_025244737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244737.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1266567 1267187 . + . ID=gene1317;Name=SOPEG_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06545;old_locus_tag=SOPEG_1229 NZ_CP006568.1 Protein Homology CDS 1266567 1267187 . + 0 ID=cds1294;Parent=gene1317;Dbxref=Genbank:WP_025244738.1;Name=WP_025244738.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_025244738.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1267347 1268093 . + . ID=gene1318;Name=SOPEG_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06550;old_locus_tag=SOPEG_1230 NZ_CP006568.1 Protein Homology CDS 1267347 1268093 . + 0 ID=cds1295;Parent=gene1318;Dbxref=Genbank:WP_025244739.1;Name=WP_025244739.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=adenosine-3'(2')%2C5'-bisphosphate nucleotidase;protein_id=WP_025244739.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1268244 1268810 . - . ID=gene1319;Name=SOPEG_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06555;old_locus_tag=SOPEG_1231 NZ_CP006568.1 Protein Homology CDS 1268244 1268810 . - 0 ID=cds1296;Parent=gene1319;Dbxref=Genbank:WP_025244740.1;Name=WP_025244740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244740.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1269089 1269280 . + . ID=gene1320;Name=SOPEG_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06560;old_locus_tag=SOPEG_1232 NZ_CP006568.1 Protein Homology CDS 1269089 1269280 . + 0 ID=cds1297;Parent=gene1320;Dbxref=Genbank:WP_038468381.1;Name=WP_038468381.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468381.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1269381 1270715 . - . ID=gene1321;Name=SOPEG_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06565;pseudo=true NZ_CP006568.1 Protein Homology CDS 1269381 1270715 . - 0 ID=cds1298;Parent=gene1321;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1269870..1269872)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1270852 1271433 . - . ID=gene1322;Name=SOPEG_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06570;old_locus_tag=SOPEG_1234 NZ_CP006568.1 Protein Homology CDS 1270852 1271433 . - 0 ID=cds1299;Parent=gene1322;Dbxref=Genbank:WP_051419998.1;Name=WP_051419998.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=methionine sulfoxide reductase A;protein_id=WP_051419998.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1271833 1273575 . + . ID=gene1323;Name=SOPEG_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06575;old_locus_tag=SOPEG_1235 NZ_CP006568.1 Protein Homology CDS 1271833 1273575 . + 0 ID=cds1300;Parent=gene1323;Dbxref=Genbank:WP_025244742.1;Name=WP_025244742.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244742.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1273572 1277396 . + . ID=gene1324;Name=SOPEG_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06580;old_locus_tag=SOPEG_1236 NZ_CP006568.1 Protein Homology CDS 1273572 1277396 . + 0 ID=cds1301;Parent=gene1324;Dbxref=Genbank:WP_025244743.1;Name=WP_025244743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244743.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1277399 1277761 . + . ID=gene1325;Name=SOPEG_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06585;old_locus_tag=SOPEG_1237 NZ_CP006568.1 Protein Homology CDS 1277399 1277761 . + 0 ID=cds1302;Parent=gene1325;Dbxref=Genbank:WP_025244744.1;Name=WP_025244744.1;gbkey=CDS;product=gamma-glutamylcyclotransferase;protein_id=WP_025244744.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1277806 1278336 . - . ID=gene1326;Name=SOPEG_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06590;old_locus_tag=SOPEG_1238 NZ_CP006568.1 Protein Homology CDS 1277806 1278336 . - 0 ID=cds1303;Parent=gene1326;Dbxref=Genbank:WP_025244745.1;Name=WP_025244745.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_025244745.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1278520 1279509 . - . ID=gene1327;Name=SOPEG_RS06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06595;pseudo=true NZ_CP006568.1 Protein Homology CDS 1278520 1279509 . - 0 ID=cds1304;Parent=gene1327;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;pseudo=true;transl_except=(pos:complement(1278889..1278891)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1279699 1281054 . + . ID=gene1328;Name=SOPEG_RS06600;end_range=1281054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06600;old_locus_tag=SOPEG_1240;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1279699 1281054 . + 0 ID=cds1305;Parent=gene1328;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;end_range=1281054,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1281350 1281607 . - . ID=gene1329;Name=SOPEG_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06605;old_locus_tag=SOPEG_1241 NZ_CP006568.1 Protein Homology CDS 1281350 1281607 . - 0 ID=cds1306;Parent=gene1329;Dbxref=Genbank:WP_025244747.1;Name=WP_025244747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244747.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1282284 1282754 . - . ID=gene1330;Name=SOPEG_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06610;old_locus_tag=SOPEG_1242 NZ_CP006568.1 Protein Homology CDS 1282284 1282754 . - 0 ID=cds1307;Parent=gene1330;Dbxref=Genbank:WP_025244748.1;Name=WP_025244748.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_025244748.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1283008 1283938 . + . ID=gene1331;Name=SOPEG_RS06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06615;pseudo=true NZ_CP006568.1 Protein Homology CDS 1283008 1283938 . + 0 ID=cds1308;Parent=gene1331;Note=oxidizes malate to oxaloacetate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=malate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1284727 1285104 . + . ID=gene1332;Name=SOPEG_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06620;old_locus_tag=SOPEG_1244 NZ_CP006568.1 Protein Homology CDS 1284727 1285104 . + 0 ID=cds1309;Parent=gene1332;Dbxref=Genbank:WP_025244749.1;Name=WP_025244749.1;gbkey=CDS;product=Cro/Cl family transcriptional regulator;protein_id=WP_025244749.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1285148 1285411 . - . ID=gene1333;Name=SOPEG_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06625;old_locus_tag=SOPEG_1245 NZ_CP006568.1 Protein Homology CDS 1285148 1285411 . - 0 ID=cds1310;Parent=gene1333;Dbxref=Genbank:WP_025244750.1;Name=WP_025244750.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025244750.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1285598 1285978 . + . ID=gene1334;Name=SOPEG_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06630;old_locus_tag=SOPEG_1246 NZ_CP006568.1 Protein Homology CDS 1285598 1285978 . + 0 ID=cds1311;Parent=gene1334;Dbxref=Genbank:WP_025244751.1;Name=WP_025244751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244751.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1286069 1287040 . - . ID=gene1335;Name=SOPEG_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06635;old_locus_tag=SOPEG_1247 NZ_CP006568.1 Protein Homology CDS 1286069 1287040 . - 0 ID=cds1312;Parent=gene1335;Dbxref=Genbank:WP_025244752.1;Name=WP_025244752.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_025244752.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1287312 1287623 . + . ID=gene1336;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SOPEG_RS06640;old_locus_tag=SOPEG_1248 NZ_CP006568.1 Protein Homology CDS 1287312 1287623 . + 0 ID=cds1313;Parent=gene1336;Dbxref=Genbank:WP_025244753.1;Name=WP_025244753.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_025244753.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1287639 1287896 . + . ID=gene1337;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06645;old_locus_tag=SOPEG_1249 NZ_CP006568.1 Protein Homology CDS 1287639 1287896 . + 0 ID=cds1314;Parent=gene1337;Dbxref=Genbank:WP_025244754.1;Name=WP_025244754.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_025244754.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1287986 1288925 . + . ID=gene1338;Name=SOPEG_RS06650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06650;pseudo=true NZ_CP006568.1 Protein Homology CDS 1287986 1288925 . + 0 ID=cds1315;Parent=gene1338;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1288085..1288087%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1288942 1290108 . + . ID=gene1339;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SOPEG_RS06655;old_locus_tag=SOPEG_1251 NZ_CP006568.1 Protein Homology CDS 1288942 1290108 . + 0 ID=cds1316;Parent=gene1339;Dbxref=Genbank:WP_025244755.1;Name=WP_025244755.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase CgtA;protein_id=WP_025244755.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1290941 1291855 . + . ID=gene1340;Name=SOPEG_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06660 NZ_CP006568.1 GeneMarkS+ CDS 1290941 1291855 . + 0 ID=cds1317;Parent=gene1340;Dbxref=Genbank:WP_025244756.1;Name=WP_025244756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244756.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1291884 1292498 . + . ID=gene1341;Name=SOPEG_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06665 NZ_CP006568.1 GeneMarkS+ CDS 1291884 1292498 . + 0 ID=cds1318;Parent=gene1341;Dbxref=Genbank:WP_038468386.1;Name=WP_038468386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468386.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1292534 1293004 . + . ID=gene1342;Name=SOPEG_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06670 NZ_CP006568.1 GeneMarkS+ CDS 1292534 1293004 . + 0 ID=cds1319;Parent=gene1342;Dbxref=Genbank:WP_025244758.1;Name=WP_025244758.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244758.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1293056 1294490 . - . ID=gene1343;Name=SOPEG_RS06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06675;pseudo=true NZ_CP006568.1 Protein Homology CDS 1293056 1294490 . - 0 ID=cds1320;Parent=gene1343;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;exception=annotated by transcript or proteomic data;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1294751 1295227 . + . ID=gene1344;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06680;old_locus_tag=SOPEG_1254 NZ_CP006568.1 Protein Homology CDS 1294751 1295227 . + 0 ID=cds1321;Parent=gene1344;Dbxref=Genbank:WP_025244759.1;Name=WP_025244759.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_025244759.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1295376 1295660 . - . ID=gene1345;Name=SOPEG_RS06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06685;partial=true;pseudo=true;start_range=.,1295376 NZ_CP006568.1 Protein Homology CDS 1295376 1295660 . - 0 ID=cds1322;Parent=gene1345;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=RNA-binding protein;pseudo=true;start_range=.,1295376;transl_table=11 NZ_CP006568.1 RefSeq gene 1295814 1296443 . + . ID=gene1346;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=SOPEG_RS06690;old_locus_tag=SOPEG_1256 NZ_CP006568.1 Protein Homology CDS 1295814 1296443 . + 0 ID=cds1323;Parent=gene1346;Dbxref=Genbank:WP_025244760.1;Name=WP_025244760.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=23S rRNA methyltransferase;protein_id=WP_025244760.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1296499 1298430 . + . ID=gene1347;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=SOPEG_RS06695;old_locus_tag=SOPEG_1257 NZ_CP006568.1 Protein Homology CDS 1296499 1298430 . + 0 ID=cds1324;Parent=gene1347;Dbxref=Genbank:WP_025244761.1;Name=WP_025244761.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_025244761.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1298573 1299418 . + . ID=gene1348;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SOPEG_RS06700;old_locus_tag=SOPEG_1258 NZ_CP006568.1 Protein Homology CDS 1298573 1299418 . + 0 ID=cds1325;Parent=gene1348;Dbxref=Genbank:WP_025244762.1;Name=WP_025244762.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_025244762.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1299415 1300752 . + . ID=gene1349;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SOPEG_RS06705;old_locus_tag=SOPEG_1259 NZ_CP006568.1 Protein Homology CDS 1299415 1300752 . + 0 ID=cds1326;Parent=gene1349;Dbxref=Genbank:WP_025244763.1;Name=WP_025244763.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_025244763.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1300794 1301057 . - . ID=gene1350;Name=SOPEG_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06710 NZ_CP006568.1 GeneMarkS+ CDS 1300794 1301057 . - 0 ID=cds1327;Parent=gene1350;Dbxref=Genbank:WP_025244764.1;Name=WP_025244764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244764.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1301221 1301553 . + . ID=gene1351;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SOPEG_RS06715;old_locus_tag=SOPEG_1260 NZ_CP006568.1 Protein Homology CDS 1301221 1301553 . + 0 ID=cds1328;Parent=gene1351;Dbxref=Genbank:WP_011410237.1;Name=WP_011410237.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_011410237.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1301612 1301698 . + . ID=gene1352;Name=SOPEG_RS06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS06720;old_locus_tag=SOPEG_t1261 NZ_CP006568.1 tRNAscan-SE tRNA 1301612 1301698 . + . ID=rna23;Parent=gene1352;anticodon=(pos:1301646..1301648);gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 1301612 1301698 . + . ID=id188;Parent=rna23;anticodon=(pos:1301646..1301648);gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 1301758 1301834 . + . ID=gene1353;Name=SOPEG_RS06725;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS06725;old_locus_tag=SOPEG_t1262 NZ_CP006568.1 tRNAscan-SE tRNA 1301758 1301834 . + . ID=rna24;Parent=gene1353;anticodon=(pos:1301792..1301794);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 tRNAscan-SE exon 1301758 1301834 . + . ID=id189;Parent=rna24;anticodon=(pos:1301792..1301794);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 RefSeq gene 1302049 1302501 . + . ID=gene1354;Name=SOPEG_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06730;old_locus_tag=SOPEG_1263 NZ_CP006568.1 Protein Homology CDS 1302049 1302501 . + 0 ID=cds1329;Parent=gene1354;Dbxref=Genbank:WP_025244765.1;Name=WP_025244765.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation protein RimP;protein_id=WP_025244765.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1302523 1304010 . + . ID=gene1355;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06735;old_locus_tag=SOPEG_1264 NZ_CP006568.1 Protein Homology CDS 1302523 1304010 . + 0 ID=cds1330;Parent=gene1355;Dbxref=Genbank:WP_025244766.1;Name=WP_025244766.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_025244766.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1304036 1306672 . + . ID=gene1356;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SOPEG_RS06740;old_locus_tag=SOPEG_1265 NZ_CP006568.1 Protein Homology CDS 1304036 1306672 . + 0 ID=cds1331;Parent=gene1356;Dbxref=Genbank:WP_025244767.1;Name=WP_025244767.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_025244767.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1306741 1307157 . + . ID=gene1357;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SOPEG_RS06745;old_locus_tag=SOPEG_1266 NZ_CP006568.1 Protein Homology CDS 1306741 1307157 . + 0 ID=cds1332;Parent=gene1357;Dbxref=Genbank:WP_025244768.1;Name=WP_025244768.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_025244768.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1307157 1308098 . + . ID=gene1358;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SOPEG_RS06750;old_locus_tag=SOPEG_1267 NZ_CP006568.1 Protein Homology CDS 1307157 1308098 . + 0 ID=cds1333;Parent=gene1358;Dbxref=Genbank:WP_025244769.1;Name=WP_025244769.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_025244769.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1308218 1308487 . + . ID=gene1359;Name=SOPEG_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06755;old_locus_tag=SOPEG_1268 NZ_CP006568.1 Protein Homology CDS 1308218 1308487 . + 0 ID=cds1334;Parent=gene1359;Dbxref=Genbank:WP_025244770.1;Name=WP_025244770.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_025244770.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1308747 1310900 . + . ID=gene1360;Name=SOPEG_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06760;old_locus_tag=SOPEG_1269 NZ_CP006568.1 Protein Homology CDS 1308747 1310900 . + 0 ID=cds1335;Parent=gene1360;Dbxref=Genbank:WP_025244771.1;Name=WP_025244771.1;gbkey=CDS;product=polynucleotide phosphorylase/polyadenylase;protein_id=WP_025244771.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1310987 1311874 . + . ID=gene1361;Name=SOPEG_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06765;old_locus_tag=SOPEG_1270 NZ_CP006568.1 Protein Homology CDS 1310987 1311874 . + 0 ID=cds1336;Parent=gene1361;Dbxref=Genbank:WP_025244772.1;Name=WP_025244772.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_025244772.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1312052 1313759 . + . ID=gene1362;Name=SOPEG_RS06770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06770;pseudo=true NZ_CP006568.1 Protein Homology CDS 1312052 1313759 . + 0 ID=cds1337;Parent=gene1362;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1313956 1314959 . - . ID=gene1363;Name=SOPEG_RS06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06775;pseudo=true NZ_CP006568.1 Protein Homology CDS 1313956 1314959 . - 0 ID=cds1338;Parent=gene1363;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1314367..1314369)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1315317 1316196 . - . ID=gene1364;Name=SOPEG_RS06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06780;pseudo=true NZ_CP006568.1 Protein Homology CDS 1315317 1316196 . - 0 ID=cds1339;Parent=gene1364;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protease;pseudo=true;transl_except=(pos:complement(1315761..1315763)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1316292 1318242 . + . ID=id190;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1316420 1316644 . - . ID=gene1365;Name=SOPEG_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06785 NZ_CP006568.1 Protein Homology CDS 1316420 1316644 . - 0 ID=cds1340;Parent=gene1365;Dbxref=Genbank:WP_051419507.1;Name=WP_051419507.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419507.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1316745 1317953 . + . ID=gene1366;Name=SOPEG_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06790;old_locus_tag=SOPEG_1276 NZ_CP006568.1 Protein Homology CDS 1316745 1317953 . + 0 ID=cds1341;Parent=gene1366;Dbxref=Genbank:WP_025244775.1;Name=WP_025244775.1;gbkey=CDS;product=transposase;protein_id=WP_025244775.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1318238 1318396 . - . ID=gene1367;Name=SOPEG_RS06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06795;partial=true;pseudo=true;start_range=.,1318238 NZ_CP006568.1 Protein Homology CDS 1318238 1318396 . - 0 ID=cds1342;Parent=gene1367;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1318238;transl_table=11 NZ_CP006568.1 RefSeq gene 1318622 1319011 . - . ID=gene1368;Name=SOPEG_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22580 NZ_CP006568.1 Protein Homology CDS 1318622 1319011 . - 0 ID=cds1343;Parent=gene1368;Dbxref=Genbank:WP_025244776.1;Name=WP_025244776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244776.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1319014 1319340 . - . ID=gene1369;Name=SOPEG_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22585 NZ_CP006568.1 GeneMarkS+ CDS 1319014 1319340 . - 0 ID=cds1344;Parent=gene1369;Dbxref=Genbank:WP_025244777.1;Name=WP_025244777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244777.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1319326 1319508 . + . ID=gene1370;Name=SOPEG_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06805 NZ_CP006568.1 GeneMarkS+ CDS 1319326 1319508 . + 0 ID=cds1345;Parent=gene1370;Dbxref=Genbank:WP_025244778.1;Name=WP_025244778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244778.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1319657 1320886 . - . ID=gene1371;Name=SOPEG_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06810;old_locus_tag=SOPEG_1280 NZ_CP006568.1 Protein Homology CDS 1319657 1320886 . - 0 ID=cds1346;Parent=gene1371;Dbxref=Genbank:WP_025244779.1;Name=WP_025244779.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244779.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1320900 1322170 . - . ID=gene1372;Name=SOPEG_RS06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06815;pseudo=true NZ_CP006568.1 Protein Homology CDS 1320900 1322170 . - 0 ID=cds1347;Parent=gene1372;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA repair protein RadA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1322305 1323282 . - . ID=gene1373;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SOPEG_RS06820;old_locus_tag=SOPEG_1282 NZ_CP006568.1 Protein Homology CDS 1322305 1323282 . - 0 ID=cds1348;Parent=gene1373;Dbxref=Genbank:WP_025244780.1;Name=WP_025244780.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_025244780.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1323390 1324094 . + . ID=gene1374;Name=SOPEG_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06825;old_locus_tag=SOPEG_1283 NZ_CP006568.1 Protein Homology CDS 1323390 1324094 . + 0 ID=cds1349;Parent=gene1374;Dbxref=Genbank:WP_025244781.1;Name=WP_025244781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244781.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1324123 1324842 . - . ID=gene1375;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SOPEG_RS06830;old_locus_tag=SOPEG_1284 NZ_CP006568.1 Protein Homology CDS 1324123 1324842 . - 0 ID=cds1350;Parent=gene1375;Dbxref=Genbank:WP_025244782.1;Name=WP_025244782.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_025244782.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1324998 1326221 . - . ID=gene1376;Name=SOPEG_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06835;old_locus_tag=SOPEG_1285 NZ_CP006568.1 Protein Homology CDS 1324998 1326221 . - 0 ID=cds1351;Parent=gene1376;Dbxref=Genbank:WP_025244783.1;Name=WP_025244783.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_025244783.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1326324 1327315 . - . ID=gene1377;Name=SOPEG_RS06840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06840;pseudo=true NZ_CP006568.1 Protein Homology CDS 1326324 1327315 . - 0 ID=cds1352;Parent=gene1377;exception=annotated by transcript or proteomic data;gbkey=CDS;product=thymidine phosphorylase;pseudo=true;transl_except=(pos:complement(1327031..1327033)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1327393 1328172 . - . ID=gene1378;Name=SOPEG_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06845;old_locus_tag=SOPEG_1287 NZ_CP006568.1 Protein Homology CDS 1327393 1328172 . - 0 ID=cds1353;Parent=gene1378;Dbxref=Genbank:WP_025244784.1;Name=WP_025244784.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_025244784.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1328660 1329303 . - . ID=gene1379;Name=SOPEG_RS06850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06850;pseudo=true NZ_CP006568.1 Protein Homology CDS 1328660 1329303 . - 0 ID=cds1354;Parent=gene1379;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1329753 1331074 . + . ID=id191;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1330054 1331037 . + . ID=gene1380;Name=SOPEG_RS22590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22590;old_locus_tag=SOPEG_ps1290;pseudo=true NZ_CP006568.1 Protein Homology CDS 1330054 1331037 . + 0 ID=cds1355;Parent=gene1380;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1330627..1330629%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1331568 1332630 . + . ID=id192;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1331629 1332552 . - . ID=gene1381;Name=SOPEG_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06865;old_locus_tag=SOPEG_1292 NZ_CP006568.1 Protein Homology CDS 1331629 1332552 . - 0 ID=cds1356;Parent=gene1381;Dbxref=Genbank:WP_025244788.1;Name=WP_025244788.1;gbkey=CDS;product=transposase;protein_id=WP_025244788.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1332674 1333288 . - . ID=gene1382;Name=SOPEG_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06870;old_locus_tag=SOPEG_1293 NZ_CP006568.1 Protein Homology CDS 1332674 1333288 . - 0 ID=cds1357;Parent=gene1382;Dbxref=Genbank:WP_025244789.1;Name=WP_025244789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244789.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1333326 1333607 . - . ID=gene1383;Name=SOPEG_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06875 NZ_CP006568.1 GeneMarkS+ CDS 1333326 1333607 . - 0 ID=cds1358;Parent=gene1383;Dbxref=Genbank:WP_038468392.1;Name=WP_038468392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468392.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1334020 1335609 . - . ID=gene1384;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SOPEG_RS06880;old_locus_tag=SOPEG_1294 NZ_CP006568.1 Protein Homology CDS 1334020 1335609 . - 0 ID=cds1359;Parent=gene1384;Dbxref=Genbank:WP_025244790.1;Name=WP_025244790.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_025244790.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1335732 1336175 . - . ID=gene1385;Name=SOPEG_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06885;old_locus_tag=SOPEG_1295 NZ_CP006568.1 Protein Homology CDS 1335732 1336175 . - 0 ID=cds1360;Parent=gene1385;Dbxref=Genbank:WP_025244791.1;Name=WP_025244791.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_025244791.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1336144 1336557 . - . ID=gene1386;Name=SOPEG_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06890;old_locus_tag=SOPEG_1296 NZ_CP006568.1 Protein Homology CDS 1336144 1336557 . - 0 ID=cds1361;Parent=gene1386;Dbxref=Genbank:WP_025244792.1;Name=WP_025244792.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_025244792.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1336670 1337722 . + . ID=gene1387;Name=SOPEG_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06895;old_locus_tag=SOPEG_1297 NZ_CP006568.1 Protein Homology CDS 1336670 1337722 . + 0 ID=cds1362;Parent=gene1387;Dbxref=Genbank:WP_025244793.1;Name=WP_025244793.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_025244793.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1337888 1337974 . + . ID=gene1388;Name=SOPEG_RS06900;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS06900;old_locus_tag=SOPEG_t1298 NZ_CP006568.1 tRNAscan-SE tRNA 1337888 1337974 . + . ID=rna25;Parent=gene1388;anticodon=(pos:1337922..1337924);gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 1337888 1337974 . + . ID=id193;Parent=rna25;anticodon=(pos:1337922..1337924);gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 1338403 1339512 . + . ID=gene1389;Name=SOPEG_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06905;old_locus_tag=SOPEG_1299 NZ_CP006568.1 Protein Homology CDS 1338403 1339512 . + 0 ID=cds1363;Parent=gene1389;Dbxref=Genbank:WP_025244794.1;Name=WP_025244794.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_025244794.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1340028 1341090 . + . ID=id194;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1340088 1341011 . - . ID=gene1390;Name=SOPEG_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06910;old_locus_tag=SOPEG_1300 NZ_CP006568.1 Protein Homology CDS 1340088 1341011 . - 0 ID=cds1364;Parent=gene1390;Dbxref=Genbank:WP_025244795.1;Name=WP_025244795.1;gbkey=CDS;product=transposase;protein_id=WP_025244795.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1341222 1342285 . + . ID=id195;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1341284 1341424 . - . ID=gene1391;Name=SOPEG_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06915 NZ_CP006568.1 Protein Homology CDS 1341284 1341424 . - 0 ID=cds1365;Parent=gene1391;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1341386 1342207 . - . ID=gene1392;Name=SOPEG_RS22595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22595;old_locus_tag=SOPEG_ps1301;partial=true;pseudo=true;start_range=.,1341386 NZ_CP006568.1 Protein Homology CDS 1341386 1342207 . - 0 ID=cds1366;Parent=gene1392;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1341386;transl_except=(pos:complement(1341812..1341814)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1342286 1342806 . + . ID=gene1393;Name=SOPEG_RS06925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06925;pseudo=true NZ_CP006568.1 Protein Homology CDS 1342286 1342806 . + 0 ID=cds1367;Parent=gene1393;exception=annotated by transcript or proteomic data;gbkey=CDS;product=general stress protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1343208 1343471 . + . ID=gene1394;Name=SOPEG_RS06930;end_range=1343471,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06930;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1343208 1343471 . + 0 ID=cds1368;Parent=gene1394;end_range=1343471,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=GIY-YIG nuclease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1343591 1344112 . - . ID=gene1395;Name=SOPEG_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06935;old_locus_tag=SOPEG_1304 NZ_CP006568.1 Protein Homology CDS 1343591 1344112 . - 0 ID=cds1369;Parent=gene1395;Dbxref=Genbank:WP_038468399.1;Name=WP_038468399.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_038468399.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1344106 1344618 . - . ID=gene1396;Name=SOPEG_RS06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06940;pseudo=true NZ_CP006568.1 Protein Homology CDS 1344106 1344618 . - 0 ID=cds1370;Parent=gene1396;gbkey=CDS;product=SCP-2 sterol transfer family protein;pseudo=true;transl_except=(pos:complement(1344499..1344501)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1344908 1345849 . + . ID=gene1397;Name=SOPEG_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06945;old_locus_tag=SOPEG_1306 NZ_CP006568.1 Protein Homology CDS 1344908 1345849 . + 0 ID=cds1371;Parent=gene1397;Dbxref=Genbank:WP_025244798.1;Name=WP_025244798.1;gbkey=CDS;product=protease;protein_id=WP_025244798.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1345844 1350782 . + . ID=id196;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1345952 1346711 . - . ID=gene1398;Name=SOPEG_RS06950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS06950;pseudo=true NZ_CP006568.1 Protein Homology CDS 1345952 1346711 . - 0 ID=cds1372;Parent=gene1398;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1346652..1346654)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1347060 1348577 . + . ID=gene1399;Name=SOPEG_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06955;old_locus_tag=SOPEG_1308 NZ_CP006568.1 Protein Homology CDS 1347060 1348577 . + 0 ID=cds1373;Parent=gene1399;Dbxref=Genbank:WP_051419510.1;Name=WP_051419510.1;gbkey=CDS;product=transposase;protein_id=WP_051419510.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1348589 1349338 . + . ID=gene1400;Name=SOPEG_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06960;old_locus_tag=SOPEG_1309 NZ_CP006568.1 Protein Homology CDS 1348589 1349338 . + 0 ID=cds1374;Parent=gene1400;Dbxref=Genbank:WP_025244800.1;Name=WP_025244800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244800.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1349421 1350629 . - . ID=gene1401;Name=SOPEG_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06965;old_locus_tag=SOPEG_1310 NZ_CP006568.1 Protein Homology CDS 1349421 1350629 . - 0 ID=cds1375;Parent=gene1401;Dbxref=Genbank:WP_025244801.1;Name=WP_025244801.1;gbkey=CDS;product=transposase;protein_id=WP_025244801.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1350826 1351335 . - . ID=gene1402;Name=SOPEG_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06970;old_locus_tag=SOPEG_1311 NZ_CP006568.1 Protein Homology CDS 1350826 1351335 . - 0 ID=cds1376;Parent=gene1402;Dbxref=Genbank:WP_025244802.1;Name=WP_025244802.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244802.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1351405 1351923 . - . ID=gene1403;Name=SOPEG_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06975;old_locus_tag=SOPEG_1312 NZ_CP006568.1 Protein Homology CDS 1351405 1351923 . - 0 ID=cds1377;Parent=gene1403;Dbxref=Genbank:WP_038468402.1;Name=WP_038468402.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468402.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1352889 1353929 . + . ID=gene1404;Name=SOPEG_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06980;old_locus_tag=SOPEG_1313 NZ_CP006568.1 Protein Homology CDS 1352889 1353929 . + 0 ID=cds1378;Parent=gene1404;Dbxref=Genbank:WP_038468405.1;Name=WP_038468405.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_038468405.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1353909 1354631 . - . ID=gene1405;Name=SOPEG_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06985;old_locus_tag=SOPEG_1314 NZ_CP006568.1 Protein Homology CDS 1353909 1354631 . - 0 ID=cds1379;Parent=gene1405;Dbxref=Genbank:WP_025244805.1;Name=WP_025244805.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244805.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1355584 1356684 . + . ID=gene1406;Name=SOPEG_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06990;old_locus_tag=SOPEG_1315 NZ_CP006568.1 Protein Homology CDS 1355584 1356684 . + 0 ID=cds1380;Parent=gene1406;Dbxref=Genbank:WP_025244806.1;Name=WP_025244806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244806.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1356681 1358243 . + . ID=gene1407;Name=SOPEG_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS06995;old_locus_tag=SOPEG_1316 NZ_CP006568.1 Protein Homology CDS 1356681 1358243 . + 0 ID=cds1381;Parent=gene1407;Dbxref=Genbank:WP_025244807.1;Name=WP_025244807.1;gbkey=CDS;product=hydantoinase subunit beta;protein_id=WP_025244807.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1358450 1358680 . + . ID=gene1408;Name=SOPEG_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07000;old_locus_tag=SOPEG_1317 NZ_CP006568.1 Protein Homology CDS 1358450 1358680 . + 0 ID=cds1382;Parent=gene1408;Dbxref=Genbank:WP_025244808.1;Name=WP_025244808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244808.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1358985 1359968 . - . ID=gene1409;Name=SOPEG_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07005;old_locus_tag=SOPEG_1318 NZ_CP006568.1 Protein Homology CDS 1358985 1359968 . - 0 ID=cds1383;Parent=gene1409;Dbxref=Genbank:WP_025244809.1;Name=WP_025244809.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_025244809.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1360106 1361512 . + . ID=gene1410;Name=SOPEG_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07010;old_locus_tag=SOPEG_1319 NZ_CP006568.1 Protein Homology CDS 1360106 1361512 . + 0 ID=cds1384;Parent=gene1410;Dbxref=Genbank:WP_025244810.1;Name=WP_025244810.1;Note=unwinds double stranded DNA;gbkey=CDS;product=DNA helicase;protein_id=WP_025244810.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1361653 1362810 . + . ID=gene1411;Name=SOPEG_RS07015;end_range=1362810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07015;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1361653 1362810 . + 0 ID=cds1385;Parent=gene1411;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;end_range=1362810,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=aromatic amino acid aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1362815 1364136 . + . ID=id197;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1362891 1364099 . + . ID=gene1412;Name=SOPEG_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07020;old_locus_tag=SOPEG_1321 NZ_CP006568.1 Protein Homology CDS 1362891 1364099 . + 0 ID=cds1386;Parent=gene1412;Dbxref=Genbank:WP_025244812.1;Name=WP_025244812.1;gbkey=CDS;product=transposase;protein_id=WP_025244812.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1364247 1364663 . + . ID=gene1413;Name=SOPEG_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07025;old_locus_tag=SOPEG_1322 NZ_CP006568.1 Protein Homology CDS 1364247 1364663 . + 0 ID=cds1387;Parent=gene1413;Dbxref=Genbank:WP_025244813.1;Name=WP_025244813.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244813.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1364667 1364966 . + . ID=gene1414;Name=SOPEG_RS07030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07030;pseudo=true NZ_CP006568.1 Protein Homology CDS 1364667 1364966 . + 0 ID=cds1388;Parent=gene1414;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1364838..1364840%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1365234 1366555 . + . ID=id198;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1365430 1366480 . - . ID=gene1415;Name=SOPEG_RS07035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07035;partial=true;pseudo=true;start_range=.,1365430 NZ_CP006568.1 Protein Homology CDS 1365430 1366480 . - 0 ID=cds1389;Parent=gene1415;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1365430;transl_table=11 NZ_CP006568.1 RefSeq gene 1366594 1369437 . - . ID=gene1416;Name=SOPEG_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07040;old_locus_tag=SOPEG_1324 NZ_CP006568.1 Protein Homology CDS 1366594 1369437 . - 0 ID=cds1390;Parent=gene1416;Dbxref=Genbank:WP_025244814.1;Name=WP_025244814.1;gbkey=CDS;product=excinuclease ABC subunit A;protein_id=WP_025244814.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1369682 1370218 . + . ID=gene1417;Name=SOPEG_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07045;old_locus_tag=SOPEG_1325 NZ_CP006568.1 Protein Homology CDS 1369682 1370218 . + 0 ID=cds1391;Parent=gene1417;Dbxref=Genbank:WP_025244815.1;Name=WP_025244815.1;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_025244815.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1370983 1372044 . + . ID=id199;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1371043 1371966 . - . ID=gene1418;Name=SOPEG_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07050;old_locus_tag=SOPEG_1327 NZ_CP006568.1 Protein Homology CDS 1371043 1371966 . - 0 ID=cds1392;Parent=gene1418;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1372027 1372779 . - . ID=gene1419;Name=SOPEG_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07055 NZ_CP006568.1 GeneMarkS+ CDS 1372027 1372779 . - 0 ID=cds1393;Parent=gene1419;Dbxref=Genbank:WP_025244816.1;Name=WP_025244816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244816.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1373580 1374500 . - . ID=gene1420;Name=SOPEG_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07060 NZ_CP006568.1 Protein Homology CDS 1373580 1374500 . - 0 ID=cds1394;Parent=gene1420;Dbxref=Genbank:WP_051419512.1;Name=WP_051419512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419512.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1374683 1375216 . - . ID=gene1421;Name=SOPEG_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07065;old_locus_tag=SOPEG_1329 NZ_CP006568.1 Protein Homology CDS 1374683 1375216 . - 0 ID=cds1395;Parent=gene1421;Dbxref=Genbank:WP_025244817.1;Name=WP_025244817.1;gbkey=CDS;product=OsmC family protein;protein_id=WP_025244817.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1375409 1376224 . - . ID=gene1422;Name=SOPEG_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07070 NZ_CP006568.1 Protein Homology CDS 1375409 1376224 . - 0 ID=cds1396;Parent=gene1422;Dbxref=Genbank:WP_051419514.1;Name=WP_051419514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419514.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1376539 1376949 . + . ID=gene1423;Name=SOPEG_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07075 NZ_CP006568.1 GeneMarkS+ CDS 1376539 1376949 . + 0 ID=cds1397;Parent=gene1423;Dbxref=Genbank:WP_038468409.1;Name=WP_038468409.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468409.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1377245 1377505 . - . ID=gene1424;Name=SOPEG_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22600 NZ_CP006568.1 Protein Homology CDS 1377245 1377505 . - 0 ID=cds1398;Parent=gene1424;Dbxref=Genbank:WP_025244819.1;Name=WP_025244819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244819.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1377644 1378966 . + . ID=id200;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1377683 1378765 . - . ID=gene1425;Name=SOPEG_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07085 NZ_CP006568.1 Protein Homology CDS 1377683 1378765 . - 0 ID=cds1399;Parent=gene1425;Dbxref=Genbank:WP_025244820.1;Name=WP_025244820.1;gbkey=CDS;product=transposase;protein_id=WP_025244820.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1378762 1378890 . - . ID=gene1426;Name=SOPEG_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07090 NZ_CP006568.1 Protein Homology CDS 1378762 1378890 . - 0 ID=cds1400;Parent=gene1426;Dbxref=Genbank:WP_025244821.1;Name=WP_025244821.1;gbkey=CDS;product=transposase;protein_id=WP_025244821.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1378963 1379442 . - . ID=gene1427;Name=SOPEG_RS07095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07095;partial=true;pseudo=true;start_range=.,1378963 NZ_CP006568.1 Protein Homology CDS 1378963 1379442 . - 0 ID=cds1401;Parent=gene1427;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1378963;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1379399 1381952 . + . ID=id201;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1379523 1380272 . - . ID=gene1428;Name=SOPEG_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07100;old_locus_tag=SOPEG_1334 NZ_CP006568.1 Protein Homology CDS 1379523 1380272 . - 0 ID=cds1402;Parent=gene1428;Dbxref=Genbank:WP_025244823.1;Name=WP_025244823.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244823.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1380284 1381801 . - . ID=gene1429;Name=SOPEG_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07105;old_locus_tag=SOPEG_1335 NZ_CP006568.1 Protein Homology CDS 1380284 1381801 . - 0 ID=cds1403;Parent=gene1429;Dbxref=Genbank:WP_025244824.1;Name=WP_025244824.1;gbkey=CDS;product=transposase;protein_id=WP_025244824.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1382180 1382938 . + . ID=gene1430;Name=SOPEG_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07110;old_locus_tag=SOPEG_1336 NZ_CP006568.1 Protein Homology CDS 1382180 1382938 . + 0 ID=cds1404;Parent=gene1430;Dbxref=Genbank:WP_025244825.1;Name=WP_025244825.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_025244825.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1383221 1385461 . + . ID=gene1431;Name=SOPEG_RS07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07115;pseudo=true NZ_CP006568.1 Protein Homology CDS 1383221 1385461 . + 0 ID=cds1405;Parent=gene1431;exception=annotated by transcript or proteomic data;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1385713 1387359 . + . ID=gene1432;Name=SOPEG_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07120;old_locus_tag=SOPEG_1338 NZ_CP006568.1 Protein Homology CDS 1385713 1387359 . + 0 ID=cds1406;Parent=gene1432;Dbxref=Genbank:WP_025244826.1;Name=WP_025244826.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_025244826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1387423 1388001 . - . ID=gene1433;Name=SOPEG_RS07125;end_range=1388001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07125;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1387423 1388001 . - 0 ID=cds1407;Parent=gene1433;end_range=1388001,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1388153 1388575 . + . ID=gene1434;Name=SOPEG_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07130;old_locus_tag=SOPEG_1340 NZ_CP006568.1 Protein Homology CDS 1388153 1388575 . + 0 ID=cds1408;Parent=gene1434;Dbxref=Genbank:WP_025244828.1;Name=WP_025244828.1;gbkey=CDS;product=murein hydrolase regulator LrgA;protein_id=WP_025244828.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1388565 1389253 . + . ID=gene1435;Name=SOPEG_RS07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07135;pseudo=true NZ_CP006568.1 Protein Homology CDS 1388565 1389253 . + 0 ID=cds1409;Parent=gene1435;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LrgB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1389321 1390983 . - . ID=gene1436;Name=actP;gbkey=Gene;gene=actP;gene_biotype=pseudogene;locus_tag=SOPEG_RS07140;pseudo=true NZ_CP006568.1 Protein Homology CDS 1389321 1390983 . - 0 ID=cds1410;Parent=gene1436;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=actP;product=acetate permease;pseudo=true;transl_except=(pos:complement(1390267..1390269)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1390973 1391290 . - . ID=gene1437;Name=SOPEG_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07145;old_locus_tag=SOPEG_1343 NZ_CP006568.1 Protein Homology CDS 1390973 1391290 . - 0 ID=cds1411;Parent=gene1437;Dbxref=Genbank:WP_025244829.1;Name=WP_025244829.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244829.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1391352 1393310 . - . ID=gene1438;Name=SOPEG_RS07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07150;pseudo=true NZ_CP006568.1 Protein Homology CDS 1391352 1393310 . - 0 ID=cds1412;Parent=gene1438;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;pseudo=true;transl_except=(pos:complement(1393239..1393241)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1393845 1395143 . + . ID=gene1439;Name=SOPEG_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07155;old_locus_tag=SOPEG_1345 NZ_CP006568.1 Protein Homology CDS 1393845 1395143 . + 0 ID=cds1413;Parent=gene1439;Dbxref=Genbank:WP_025244830.1;Name=WP_025244830.1;gbkey=CDS;product=glutamate:protein symporter;protein_id=WP_025244830.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1395340 1396041 . - . ID=gene1440;Name=SOPEG_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07160 NZ_CP006568.1 Protein Homology CDS 1395340 1396041 . - 0 ID=cds1414;Parent=gene1440;Dbxref=Genbank:WP_025244831.1;Name=WP_025244831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244831.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1395994 1398606 . + . ID=id202;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1396202 1397719 . + . ID=gene1441;Name=SOPEG_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07165;old_locus_tag=SOPEG_1347 NZ_CP006568.1 Protein Homology CDS 1396202 1397719 . + 0 ID=cds1415;Parent=gene1441;Dbxref=Genbank:WP_025244832.1;Name=WP_025244832.1;gbkey=CDS;product=transposase;protein_id=WP_025244832.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1397986 1398479 . + . ID=gene1442;Name=SOPEG_RS07170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07170;pseudo=true NZ_CP006568.1 Protein Homology CDS 1397986 1398479 . + 0 ID=cds1416;Parent=gene1442;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1398681 1401243 . + . ID=id203;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1398744 1399931 . - . ID=gene1443;Name=SOPEG_RS07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07175;old_locus_tag=SOPEG_1350;partial=true;pseudo=true;start_range=.,1398744 NZ_CP006568.1 Protein Homology CDS 1398744 1399931 . - 0 ID=cds1417;Parent=gene1443;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1398744;transl_table=11 NZ_CP006568.1 RefSeq gene 1399992 1401167 . - . ID=gene1444;Name=SOPEG_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07180 NZ_CP006568.1 Protein Homology CDS 1399992 1401167 . - 0 ID=cds1418;Parent=gene1444;Dbxref=Genbank:WP_025244833.1;Name=WP_025244833.1;gbkey=CDS;product=transposase;protein_id=WP_025244833.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1401267 1401500 . + . ID=gene1445;Name=SOPEG_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07185 NZ_CP006568.1 Protein Homology CDS 1401267 1401500 . + 0 ID=cds1419;Parent=gene1445;Dbxref=Genbank:WP_025244834.1;Name=WP_025244834.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1401497 1402374 . - . ID=gene1446;Name=SOPEG_RS07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07190;pseudo=true NZ_CP006568.1 Protein Homology CDS 1401497 1402374 . - 0 ID=cds1420;Parent=gene1446;Note=AraC family%3B binds to the right arm of the replication origin oriC;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1402555 1403037 . + . ID=gene1447;Name=SOPEG_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07195;old_locus_tag=SOPEG_1353 NZ_CP006568.1 Protein Homology CDS 1402555 1403037 . + 0 ID=cds1421;Parent=gene1447;Dbxref=Genbank:WP_025244835.1;Name=WP_025244835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244835.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1403246 1403962 . - . ID=gene1448;Name=SOPEG_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07200;old_locus_tag=SOPEG_1354 NZ_CP006568.1 Protein Homology CDS 1403246 1403962 . - 0 ID=cds1422;Parent=gene1448;Dbxref=Genbank:WP_025244836.1;Name=WP_025244836.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_025244836.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1405048 1407498 . + . ID=gene1449;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07205;old_locus_tag=SOPEG_1355 NZ_CP006568.1 Protein Homology CDS 1405048 1407498 . + 0 ID=cds1423;Parent=gene1449;Dbxref=Genbank:WP_025244837.1;Name=WP_025244837.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=aspartate kinase;protein_id=WP_025244837.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1407500 1408432 . + . ID=gene1450;Name=SOPEG_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07210;old_locus_tag=SOPEG_1356 NZ_CP006568.1 Protein Homology CDS 1407500 1408432 . + 0 ID=cds1424;Parent=gene1450;Dbxref=Genbank:WP_025244838.1;Name=WP_025244838.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_025244838.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1408436 1409737 . + . ID=gene1451;Name=SOPEG_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07215;old_locus_tag=SOPEG_1357 NZ_CP006568.1 Protein Homology CDS 1408436 1409737 . + 0 ID=cds1425;Parent=gene1451;Dbxref=Genbank:WP_025244839.1;Name=WP_025244839.1;gbkey=CDS;product=threonine synthase;protein_id=WP_025244839.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1409839 1410618 . - . ID=gene1452;Name=SOPEG_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07220;old_locus_tag=SOPEG_1358 NZ_CP006568.1 Protein Homology CDS 1409839 1410618 . - 0 ID=cds1426;Parent=gene1452;Dbxref=Genbank:WP_025244840.1;Name=WP_025244840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244840.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1410677 1412050 . - . ID=gene1453;Name=SOPEG_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07225;old_locus_tag=SOPEG_1359 NZ_CP006568.1 Protein Homology CDS 1410677 1412050 . - 0 ID=cds1427;Parent=gene1453;Dbxref=Genbank:WP_025244841.1;Name=WP_025244841.1;gbkey=CDS;product=sodium:alanine symporter;protein_id=WP_025244841.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1412254 1413207 . + . ID=gene1454;Name=SOPEG_RS07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07230;pseudo=true NZ_CP006568.1 Protein Homology CDS 1412254 1413207 . + 0 ID=cds1428;Parent=gene1454;gbkey=CDS;product=transaldolase;pseudo=true;transl_except=(pos:1412740..1412742%2Caa:Other),(pos:1413100..1413102%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1413327 1413916 . + . ID=gene1455;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=pseudogene;locus_tag=SOPEG_RS07235;pseudo=true NZ_CP006568.1 Protein Homology CDS 1413327 1413916 . + 0 ID=cds1429;Parent=gene1455;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1414117 1415427 . + . ID=gene1456;Name=SOPEG_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07240;old_locus_tag=SOPEG_1362 NZ_CP006568.1 Protein Homology CDS 1414117 1415427 . + 0 ID=cds1430;Parent=gene1456;Dbxref=Genbank:WP_025244842.1;Name=WP_025244842.1;gbkey=CDS;product=MFS transporter;protein_id=WP_025244842.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1415897 1417789 . + . ID=gene1457;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SOPEG_RS07245;old_locus_tag=SOPEG_1363 NZ_CP006568.1 Protein Homology CDS 1415897 1417789 . + 0 ID=cds1431;Parent=gene1457;Dbxref=Genbank:WP_025244843.1;Name=WP_025244843.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_025244843.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1417901 1419016 . + . ID=gene1458;Name=SOPEG_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07250;old_locus_tag=SOPEG_1364 NZ_CP006568.1 Protein Homology CDS 1417901 1419016 . + 0 ID=cds1432;Parent=gene1458;Dbxref=Genbank:WP_025244844.1;Name=WP_025244844.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_025244844.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1419186 1420409 . + . ID=gene1459;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07255;old_locus_tag=SOPEG_1365 NZ_CP006568.1 Protein Homology CDS 1419186 1420409 . + 0 ID=cds1433;Parent=gene1459;Dbxref=Genbank:WP_025244845.1;Name=WP_025244845.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=pH-dependent sodium/proton antiporter;protein_id=WP_025244845.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1420576 1420839 . - . ID=gene1460;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SOPEG_RS07260;old_locus_tag=SOPEG_1366 NZ_CP006568.1 Protein Homology CDS 1420576 1420839 . - 0 ID=cds1434;Parent=gene1460;Dbxref=Genbank:WP_025244846.1;Name=WP_025244846.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_025244846.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1421256 1422194 . + . ID=gene1461;Name=SOPEG_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07265;old_locus_tag=SOPEG_1367 NZ_CP006568.1 Protein Homology CDS 1421256 1422194 . + 0 ID=cds1435;Parent=gene1461;Dbxref=Genbank:WP_025244847.1;Name=WP_025244847.1;gbkey=CDS;product=riboflavin kinase;protein_id=WP_025244847.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1422226 1425045 . + . ID=gene1462;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SOPEG_RS07270;old_locus_tag=SOPEG_1368 NZ_CP006568.1 Protein Homology CDS 1422226 1425045 . + 0 ID=cds1436;Parent=gene1462;Dbxref=Genbank:WP_025244848.1;Name=WP_025244848.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=WP_025244848.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1425042 1425551 . + . ID=gene1463;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07275;old_locus_tag=SOPEG_1369 NZ_CP006568.1 Protein Homology CDS 1425042 1425551 . + 0 ID=cds1437;Parent=gene1463;Dbxref=Genbank:WP_038468417.1;Name=WP_038468417.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_038468417.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1425556 1426030 . + . ID=gene1464;Name=SOPEG_RS07280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07280;pseudo=true NZ_CP006568.1 Protein Homology CDS 1425556 1426030 . + 0 ID=cds1438;Parent=gene1464;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1426011 1426961 . + . ID=gene1465;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=SOPEG_RS07285;old_locus_tag=SOPEG_1371 NZ_CP006568.1 Protein Homology CDS 1426011 1426961 . + 0 ID=cds1439;Parent=gene1465;Dbxref=Genbank:WP_025244850.1;Name=WP_025244850.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_025244850.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1427052 1427854 . - . ID=gene1466;Name=SOPEG_RS07290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07290;partial=true;pseudo=true;start_range=.,1427052 NZ_CP006568.1 Protein Homology CDS 1427052 1427854 . - 0 ID=cds1440;Parent=gene1466;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=gluconolaconase;pseudo=true;start_range=.,1427052;transl_except=(pos:complement(1427520..1427522)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1428137 1428958 . + . ID=gene1467;Name=SOPEG_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07295;old_locus_tag=SOPEG_1373 NZ_CP006568.1 Protein Homology CDS 1428137 1428958 . + 0 ID=cds1441;Parent=gene1467;Dbxref=Genbank:WP_025244851.1;Name=WP_025244851.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_025244851.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1428981 1429193 . - . ID=gene1468;Name=SOPEG_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07300 NZ_CP006568.1 GeneMarkS+ CDS 1428981 1429193 . - 0 ID=cds1442;Parent=gene1468;Dbxref=Genbank:WP_025244852.1;Name=WP_025244852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244852.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1429400 1430575 . + . ID=gene1469;Name=SOPEG_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07305;old_locus_tag=SOPEG_1374 NZ_CP006568.1 Protein Homology CDS 1429400 1430575 . + 0 ID=cds1443;Parent=gene1469;Dbxref=Genbank:WP_038468420.1;Name=WP_038468420.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl phosphate synthase small subunit;protein_id=WP_038468420.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1430577 1433801 . + . ID=gene1470;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SOPEG_RS07310;old_locus_tag=SOPEG_1375 NZ_CP006568.1 Protein Homology CDS 1430577 1433801 . + 0 ID=cds1444;Parent=gene1470;Dbxref=Genbank:WP_025244854.1;Name=WP_025244854.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=WP_025244854.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1434003 1434488 . + . ID=gene1471;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07315;old_locus_tag=SOPEG_1376 NZ_CP006568.1 Protein Homology CDS 1434003 1434488 . + 0 ID=cds1445;Parent=gene1471;Dbxref=Genbank:WP_025244855.1;Name=WP_025244855.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_025244855.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1434621 1435469 . - . ID=gene1472;Name=SOPEG_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07320;old_locus_tag=SOPEG_1377 NZ_CP006568.1 Protein Homology CDS 1434621 1435469 . - 0 ID=cds1446;Parent=gene1472;Dbxref=Genbank:WP_025244856.1;Name=WP_025244856.1;gbkey=CDS;product=diadenosine tetraphosphatase;protein_id=WP_025244856.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1435472 1435849 . - . ID=gene1473;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=SOPEG_RS07325;old_locus_tag=SOPEG_1378 NZ_CP006568.1 Protein Homology CDS 1435472 1435849 . - 0 ID=cds1447;Parent=gene1473;Dbxref=Genbank:WP_025244857.1;Name=WP_025244857.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=heavy metal transporter;protein_id=WP_025244857.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1435863 1436681 . - . ID=gene1474;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07330;old_locus_tag=SOPEG_1379 NZ_CP006568.1 Protein Homology CDS 1435863 1436681 . - 0 ID=cds1448;Parent=gene1474;Dbxref=Genbank:WP_025244858.1;Name=WP_025244858.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=WP_025244858.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1436674 1437666 . - . ID=gene1475;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07335;old_locus_tag=SOPEG_1380 NZ_CP006568.1 Protein Homology CDS 1436674 1437666 . - 0 ID=cds1449;Parent=gene1475;Dbxref=Genbank:WP_025244859.1;Name=WP_025244859.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_025244859.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1437656 1438951 . - . ID=gene1476;Name=SOPEG_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07340;old_locus_tag=SOPEG_1381 NZ_CP006568.1 Protein Homology CDS 1437656 1438951 . - 0 ID=cds1450;Parent=gene1476;Dbxref=Genbank:WP_025244860.1;Name=WP_025244860.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_025244860.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1439017 1441359 . - . ID=gene1477;Name=SOPEG_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07345;old_locus_tag=SOPEG_1382 NZ_CP006568.1 Protein Homology CDS 1439017 1441359 . - 0 ID=cds1451;Parent=gene1477;Dbxref=Genbank:WP_025244861.1;Name=WP_025244861.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_025244861.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1441543 1442367 . + . ID=gene1478;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07350;old_locus_tag=SOPEG_1383 NZ_CP006568.1 Protein Homology CDS 1441543 1442367 . + 0 ID=cds1452;Parent=gene1478;Dbxref=Genbank:WP_025244862.1;Name=WP_025244862.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=molecular chaperone DnaJ;protein_id=WP_025244862.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1442692 1444014 . + . ID=id204;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1442992 1443976 . + . ID=gene1479;Name=SOPEG_RS07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07355;pseudo=true NZ_CP006568.1 Protein Homology CDS 1442992 1443976 . + 0 ID=cds1453;Parent=gene1479;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1444011 1444247 . - . ID=gene1480;Name=SOPEG_RS07360;end_range=1444247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07360;partial=true;pseudo=true;start_range=.,1444011 NZ_CP006568.1 Protein Homology CDS 1444011 1444247 . - 0 ID=cds1454;Parent=gene1480;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;end_range=1444247,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=23S rRNA pseudouridylate synthase;pseudo=true;start_range=.,1444011;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1444542 1448623 . + . ID=id205;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1444604 1445527 . - . ID=gene1481;Name=SOPEG_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07365;old_locus_tag=SOPEG_1386 NZ_CP006568.1 Protein Homology CDS 1444604 1445527 . - 0 ID=cds1455;Parent=gene1481;Dbxref=Genbank:WP_025244865.1;Name=WP_025244865.1;gbkey=CDS;product=transposase;protein_id=WP_025244865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1445675 1445815 . + . ID=gene1482;Name=SOPEG_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07370 NZ_CP006568.1 Protein Homology CDS 1445675 1445815 . + 0 ID=cds1456;Parent=gene1482;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1446221 1447739 . + . ID=gene1483;Name=SOPEG_RS07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07375;pseudo=true NZ_CP006568.1 Protein Homology CDS 1446221 1447739 . + 0 ID=cds1457;Parent=gene1483;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1447751 1448500 . + . ID=gene1484;Name=SOPEG_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07380;old_locus_tag=SOPEG_1390 NZ_CP006568.1 Protein Homology CDS 1447751 1448500 . + 0 ID=cds1458;Parent=gene1484;Dbxref=Genbank:WP_025244866.1;Name=WP_025244866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244866.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1448643 1449209 . + . ID=gene1485;Name=SOPEG_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07385 NZ_CP006568.1 Protein Homology CDS 1448643 1449209 . + 0 ID=cds1459;Parent=gene1485;Dbxref=Genbank:WP_025244867.1;Name=WP_025244867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244867.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1448716 1448941 . + . ID=id206;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 1449186 1458250 . + . ID=id207;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1449262 1450323 . - . ID=gene1486;Name=SOPEG_RS07390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07390;partial=true;pseudo=true;start_range=.,1449262 NZ_CP006568.1 Protein Homology CDS 1449262 1450323 . - 0 ID=cds1460;Parent=gene1486;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1449262;transl_table=11 NZ_CP006568.1 RefSeq gene 1450512 1451096 . - . ID=gene1487;Name=SOPEG_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07395 NZ_CP006568.1 Protein Homology CDS 1450512 1451096 . - 0 ID=cds1461;Parent=gene1487;Dbxref=Genbank:WP_051419515.1;Name=WP_051419515.1;gbkey=CDS;product=AAA family ATPase;protein_id=WP_051419515.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1451272 1452508 . - . ID=gene1488;Name=SOPEG_RS07400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07400;pseudo=true NZ_CP006568.1 Protein Homology CDS 1451272 1452508 . - 0 ID=cds1462;Parent=gene1488;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1453014 1453301 . - . ID=gene1489;Name=SOPEG_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07405;old_locus_tag=SOPEG_1395 NZ_CP006568.1 Protein Homology CDS 1453014 1453301 . - 0 ID=cds1463;Parent=gene1489;Dbxref=Genbank:WP_025244869.1;Name=WP_025244869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244869.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1453391 1453771 . - . ID=gene1490;Name=SOPEG_RS07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07410;old_locus_tag=SOPEG_1396;partial=true;pseudo=true;start_range=.,1453391 NZ_CP006568.1 Protein Homology CDS 1453391 1453771 . - 0 ID=cds1464;Parent=gene1490;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1453391;transl_table=11 NZ_CP006568.1 RefSeq gene 1453777 1454082 . - . ID=gene1491;Name=SOPEG_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07415;old_locus_tag=SOPEG_1397 NZ_CP006568.1 Protein Homology CDS 1453777 1454082 . - 0 ID=cds1465;Parent=gene1491;Dbxref=Genbank:WP_025244871.1;Name=WP_025244871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1454511 1454882 . - . ID=gene1492;Name=SOPEG_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07420;old_locus_tag=SOPEG_1398 NZ_CP006568.1 Protein Homology CDS 1454511 1454882 . - 0 ID=cds1466;Parent=gene1492;Dbxref=Genbank:WP_051419517.1;Name=WP_051419517.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419517.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1454882 1455553 . - . ID=gene1493;Name=SOPEG_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07425;old_locus_tag=SOPEG_1399 NZ_CP006568.1 Protein Homology CDS 1454882 1455553 . - 0 ID=cds1467;Parent=gene1493;Dbxref=Genbank:WP_025244873.1;Name=WP_025244873.1;gbkey=CDS;product=membrane protein;protein_id=WP_025244873.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1455585 1455788 . - . ID=gene1494;Name=SOPEG_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07430 NZ_CP006568.1 GeneMarkS+ CDS 1455585 1455788 . - 0 ID=cds1468;Parent=gene1494;Dbxref=Genbank:WP_025244874.1;Name=WP_025244874.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244874.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1455854 1456777 . - . ID=gene1495;Name=SOPEG_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07435;old_locus_tag=SOPEG_1400 NZ_CP006568.1 Protein Homology CDS 1455854 1456777 . - 0 ID=cds1469;Parent=gene1495;Dbxref=Genbank:WP_025244875.1;Name=WP_025244875.1;gbkey=CDS;product=transposase;protein_id=WP_025244875.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1456825 1457022 . - . ID=gene1496;Name=SOPEG_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07440 NZ_CP006568.1 GeneMarkS+ CDS 1456825 1457022 . - 0 ID=cds1470;Parent=gene1496;Dbxref=Genbank:WP_025244876.1;Name=WP_025244876.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244876.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1457567 1458270 . + . ID=gene1497;Name=SOPEG_RS07445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07445;pseudo=true NZ_CP006568.1 Protein Homology CDS 1457567 1458270 . + 0 ID=cds1471;Parent=gene1497;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1458267 1459156 . + . ID=gene1498;Name=SOPEG_RS07450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07450;pseudo=true NZ_CP006568.1 Protein Homology CDS 1458267 1459156 . + 0 ID=cds1472;Parent=gene1498;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1458552..1458554%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1458568 1459770 . + . ID=id208;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1459184 1460188 . + . ID=gene1499;Name=SOPEG_RS07455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07455;pseudo=true NZ_CP006568.1 Protein Homology CDS 1459184 1460188 . + 0 ID=cds1473;Parent=gene1499;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1459508..1459510%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1459783 1461233 . + . ID=id209;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1460205 1460981 . - . ID=gene1500;Name=SOPEG_RS07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07460;pseudo=true NZ_CP006568.1 Protein Homology CDS 1460205 1460981 . - 0 ID=cds1474;Parent=gene1500;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_except=(pos:complement(1460559..1460561)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1461240 1466311 . + . ID=id210;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1461249 1462506 . - . ID=gene1501;Name=SOPEG_RS07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07465;pseudo=true NZ_CP006568.1 Protein Homology CDS 1461249 1462506 . - 0 ID=cds1475;Parent=gene1501;Note=involved in the transport of aldohexuronates;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hexuronate transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1463055 1464464 . + . ID=gene1502;Name=SOPEG_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07470;old_locus_tag=SOPEG_1406 NZ_CP006568.1 Protein Homology CDS 1463055 1464464 . + 0 ID=cds1476;Parent=gene1502;Dbxref=Genbank:WP_025244877.1;Name=WP_025244877.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=glucuronate isomerase;protein_id=WP_025244877.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1464525 1465976 . + . ID=gene1503;Name=SOPEG_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07475;old_locus_tag=SOPEG_1407 NZ_CP006568.1 Protein Homology CDS 1464525 1465976 . + 0 ID=cds1477;Parent=gene1503;Dbxref=Genbank:WP_025244878.1;Name=WP_025244878.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_025244878.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1465990 1467480 . + . ID=gene1504;Name=SOPEG_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07480;old_locus_tag=SOPEG_1408 NZ_CP006568.1 Protein Homology CDS 1465990 1467480 . + 0 ID=cds1478;Parent=gene1504;Dbxref=Genbank:WP_025244879.1;Name=WP_025244879.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_025244879.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1466374 1468939 . + . ID=id211;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1467581 1468135 . + . ID=gene1505;Name=SOPEG_RS07485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07485;pseudo=true NZ_CP006568.1 Protein Homology CDS 1467581 1468135 . + 0 ID=cds1479;Parent=gene1505;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1467983..1467985%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1468221 1469172 . - . ID=gene1506;Name=SOPEG_RS07490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07490;pseudo=true NZ_CP006568.1 Protein Homology CDS 1468221 1469172 . - 0 ID=cds1480;Parent=gene1506;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1468954 1478867 . + . ID=id212;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1469409 1469840 . - . ID=gene1507;Name=SOPEG_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07495;old_locus_tag=SOPEG_1411 NZ_CP006568.1 Protein Homology CDS 1469409 1469840 . - 0 ID=cds1481;Parent=gene1507;Dbxref=Genbank:WP_051419519.1;Name=WP_051419519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419519.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1469885 1470946 . + . ID=gene1508;Name=SOPEG_RS07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07500;partial=true;pseudo=true;start_range=.,1469885 NZ_CP006568.1 Protein Homology CDS 1469885 1470946 . + 0 ID=cds1482;Parent=gene1508;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=23S rRNA methyltransferase;pseudo=true;start_range=.,1469885;transl_table=11 NZ_CP006568.1 RefSeq gene 1471028 1471327 . + . ID=gene1509;Name=SOPEG_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07505;old_locus_tag=SOPEG_1413 NZ_CP006568.1 Protein Homology CDS 1471028 1471327 . + 0 ID=cds1483;Parent=gene1509;Dbxref=Genbank:WP_025244882.1;Name=WP_025244882.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244882.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1471547 1472341 . - . ID=gene1510;Name=SOPEG_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07510 NZ_CP006568.1 GeneMarkS+ CDS 1471547 1472341 . - 0 ID=cds1484;Parent=gene1510;Dbxref=Genbank:WP_025244883.1;Name=WP_025244883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244883.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1472368 1473291 . + . ID=gene1511;Name=SOPEG_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07515;old_locus_tag=SOPEG_1415 NZ_CP006568.1 Protein Homology CDS 1472368 1473291 . + 0 ID=cds1485;Parent=gene1511;Dbxref=Genbank:WP_025244884.1;Name=WP_025244884.1;gbkey=CDS;product=transposase;protein_id=WP_025244884.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1473873 1474796 . + . ID=gene1512;Name=SOPEG_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07520;old_locus_tag=SOPEG_1416 NZ_CP006568.1 Protein Homology CDS 1473873 1474796 . + 0 ID=cds1486;Parent=gene1512;Dbxref=Genbank:WP_025244885.1;Name=WP_025244885.1;gbkey=CDS;product=transposase;protein_id=WP_025244885.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1475379 1476302 . + . ID=gene1513;Name=SOPEG_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07525;old_locus_tag=SOPEG_1417 NZ_CP006568.1 Protein Homology CDS 1475379 1476302 . + 0 ID=cds1487;Parent=gene1513;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1476365 1477093 . + . ID=gene1514;Name=SOPEG_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07530 NZ_CP006568.1 Protein Homology CDS 1476365 1477093 . + 0 ID=cds1488;Parent=gene1514;Dbxref=Genbank:WP_025244886.1;Name=WP_025244886.1;gbkey=CDS;product=transposase;protein_id=WP_025244886.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1477149 1477289 . + . ID=gene1515;Name=SOPEG_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07535 NZ_CP006568.1 Protein Homology CDS 1477149 1477289 . + 0 ID=cds1489;Parent=gene1515;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1477399 1478586 . - . ID=gene1516;Name=SOPEG_RS07540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07540;old_locus_tag=SOPEG_1419;partial=true;pseudo=true;start_range=.,1477399 NZ_CP006568.1 Protein Homology CDS 1477399 1478586 . - 0 ID=cds1490;Parent=gene1516;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1477399;transl_table=11 NZ_CP006568.1 RefSeq gene 1478863 1479950 . + . ID=gene1517;Name=SOPEG_RS07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07550;pseudo=true NZ_CP006568.1 Protein Homology CDS 1478863 1479950 . + 0 ID=cds1491;Parent=gene1517;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1480115 1481038 . + . ID=gene1518;Name=SOPEG_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07555;old_locus_tag=SOPEG_1422 NZ_CP006568.1 Protein Homology CDS 1480115 1481038 . + 0 ID=cds1492;Parent=gene1518;Dbxref=Genbank:WP_025244887.1;Name=WP_025244887.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_025244887.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1481218 1482444 . + . ID=gene1519;Name=SOPEG_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07560;old_locus_tag=SOPEG_1423 NZ_CP006568.1 Protein Homology CDS 1481218 1482444 . + 0 ID=cds1493;Parent=gene1519;Dbxref=Genbank:WP_025244888.1;Name=WP_025244888.1;Note=Confers resistance to fosfomycin and deoxycholate;gbkey=CDS;product=multidrug transporter;protein_id=WP_025244888.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1483240 1483620 . + . ID=gene1520;Name=SOPEG_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07565;old_locus_tag=SOPEG_1424 NZ_CP006568.1 Protein Homology CDS 1483240 1483620 . + 0 ID=cds1494;Parent=gene1520;Dbxref=Genbank:WP_038468426.1;Name=WP_038468426.1;gbkey=CDS;product=secY/secA suppressor protein;protein_id=WP_038468426.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1483706 1483936 . - . ID=gene1521;Name=SOPEG_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07570;old_locus_tag=SOPEG_1425 NZ_CP006568.1 Protein Homology CDS 1483706 1483936 . - 0 ID=cds1495;Parent=gene1521;Dbxref=Genbank:WP_025244889.1;Name=WP_025244889.1;gbkey=CDS;product=lipoprotein;protein_id=WP_025244889.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1484026 1484656 . - . ID=gene1522;Name=SOPEG_RS07575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07575;pseudo=true NZ_CP006568.1 Protein Homology CDS 1484026 1484656 . - 0 ID=cds1496;Parent=gene1522;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1485349 1487891 . - . ID=gene1523;Name=SOPEG_RS07580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07580;pseudo=true NZ_CP006568.1 Protein Homology CDS 1485349 1487891 . - 0 ID=cds1497;Parent=gene1523;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glucosyltransferase MdoH;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1487884 1489386 . - . ID=gene1524;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;gene_synonym=opgG;locus_tag=SOPEG_RS07585;old_locus_tag=SOPEG_1428 NZ_CP006568.1 Protein Homology CDS 1487884 1489386 . - 0 ID=cds1498;Parent=gene1524;Dbxref=Genbank:WP_051419999.1;Name=WP_051419999.1;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;protein_id=WP_051419999.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1490005 1490521 . - . ID=gene1525;Name=SOPEG_RS07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07590;pseudo=true NZ_CP006568.1 Protein Homology CDS 1490005 1490521 . - 0 ID=cds1499;Parent=gene1525;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1490775 1491923 . + . ID=gene1526;Name=SOPEG_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07595;old_locus_tag=SOPEG_1430 NZ_CP006568.1 Protein Homology CDS 1490775 1491923 . + 0 ID=cds1500;Parent=gene1526;Dbxref=Genbank:WP_025244891.1;Name=WP_025244891.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_025244891.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1492564 1492749 . - . ID=gene1527;Name=SOPEG_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07600 NZ_CP006568.1 Protein Homology CDS 1492564 1492749 . - 0 ID=cds1501;Parent=gene1527;Dbxref=Genbank:WP_025244892.1;Name=WP_025244892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244892.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1492736 1493296 . - . ID=gene1528;Name=SOPEG_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07605 NZ_CP006568.1 Protein Homology CDS 1492736 1493296 . - 0 ID=cds1502;Parent=gene1528;Dbxref=Genbank:WP_051419520.1;Name=WP_051419520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419520.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1493326 1493505 . - . ID=gene1529;Name=SOPEG_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22605 NZ_CP006568.1 GeneMarkS+ CDS 1493326 1493505 . - 0 ID=cds1503;Parent=gene1529;Dbxref=Genbank:WP_051419522.1;Name=WP_051419522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419522.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1494116 1494421 . + . ID=gene1530;Name=SOPEG_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22610;old_locus_tag=SOPEG_ps1433 NZ_CP006568.1 Protein Homology CDS 1494116 1494421 . + 0 ID=cds1504;Parent=gene1530;Dbxref=Genbank:WP_051419524.1;Name=WP_051419524.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419524.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1494594 1494836 . - . ID=gene1531;Name=SOPEG_RS07615;end_range=1494836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07615;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1494594 1494836 . - 0 ID=cds1505;Parent=gene1531;end_range=1494836,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1494831 1502439 . + . ID=id213;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1495227 1495844 . + . ID=gene1532;Name=SOPEG_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07620 NZ_CP006568.1 Protein Homology CDS 1495227 1495844 . + 0 ID=cds1506;Parent=gene1532;Dbxref=Genbank:WP_025244894.1;Name=WP_025244894.1;gbkey=CDS;product=transposase;protein_id=WP_025244894.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1495825 1496436 . + . ID=gene1533;Name=SOPEG_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07625 NZ_CP006568.1 Protein Homology CDS 1495825 1496436 . + 0 ID=cds1507;Parent=gene1533;Dbxref=Genbank:WP_025244895.1;Name=WP_025244895.1;gbkey=CDS;product=transposase;protein_id=WP_025244895.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1496490 1496789 . - . ID=gene1534;Name=SOPEG_RS07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07630;pseudo=true NZ_CP006568.1 Protein Homology CDS 1496490 1496789 . - 0 ID=cds1508;Parent=gene1534;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1496565..1496567)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1497353 1497796 . + . ID=gene1535;Name=SOPEG_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22615;old_locus_tag=SOPEG_ps1437 NZ_CP006568.1 Protein Homology CDS 1497353 1497796 . + 0 ID=cds1509;Parent=gene1535;Dbxref=Genbank:WP_051419526.1;Name=WP_051419526.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419526.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1497793 1498070 . + . ID=gene1536;Name=SOPEG_RS07640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07640;pseudo=true NZ_CP006568.1 Protein Homology CDS 1497793 1498070 . + 0 ID=cds1510;Parent=gene1536;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1498202 1498954 . + . ID=gene1537;Name=SOPEG_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07645;old_locus_tag=SOPEG_1439 NZ_CP006568.1 Protein Homology CDS 1498202 1498954 . + 0 ID=cds1511;Parent=gene1537;Dbxref=Genbank:WP_025244897.1;Name=WP_025244897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244897.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1498966 1499636 . + . ID=gene1538;Name=SOPEG_RS07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07650;pseudo=true NZ_CP006568.1 Protein Homology CDS 1498966 1499636 . + 0 ID=cds1512;Parent=gene1538;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1499313..1499315%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1499736 1500002 . - . ID=gene1539;Name=SOPEG_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22620 NZ_CP006568.1 GeneMarkS+ CDS 1499736 1500002 . - 0 ID=cds1513;Parent=gene1539;Dbxref=Genbank:WP_051419528.1;Name=WP_051419528.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419528.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1500001 1500252 . + . ID=gene1540;Name=SOPEG_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07660 NZ_CP006568.1 GeneMarkS+ CDS 1500001 1500252 . + 0 ID=cds1514;Parent=gene1540;Dbxref=Genbank:WP_025244900.1;Name=WP_025244900.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244900.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1500942 1501391 . + . ID=gene1541;Name=SOPEG_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07665 NZ_CP006568.1 Protein Homology CDS 1500942 1501391 . + 0 ID=cds1515;Parent=gene1541;Dbxref=Genbank:WP_051419530.1;Name=WP_051419530.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419530.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1501456 1502379 . + . ID=gene1542;Name=SOPEG_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07670;old_locus_tag=SOPEG_1444 NZ_CP006568.1 Protein Homology CDS 1501456 1502379 . + 0 ID=cds1516;Parent=gene1542;Dbxref=Genbank:WP_025244902.1;Name=WP_025244902.1;gbkey=CDS;product=transposase;protein_id=WP_025244902.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1502460 1503782 . + . ID=id214;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1502537 1502665 . + . ID=gene1543;Name=SOPEG_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07675 NZ_CP006568.1 Protein Homology CDS 1502537 1502665 . + 0 ID=cds1517;Parent=gene1543;Dbxref=Genbank:WP_025244903.1;Name=WP_025244903.1;gbkey=CDS;product=transposase;protein_id=WP_025244903.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1502662 1503723 . + . ID=gene1544;Name=SOPEG_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07680 NZ_CP006568.1 Protein Homology CDS 1502662 1503723 . + 0 ID=cds1518;Parent=gene1544;Dbxref=Genbank:WP_025244904.1;Name=WP_025244904.1;gbkey=CDS;product=transposase;protein_id=WP_025244904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1503786 1504262 . - . ID=gene1545;Name=SOPEG_RS07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07685;partial=true;pseudo=true;start_range=.,1503786 NZ_CP006568.1 Protein Homology CDS 1503786 1504262 . - 0 ID=cds1519;Parent=gene1545;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=thymidine kinase;pseudo=true;start_range=.,1503786;transl_table=11 NZ_CP006568.1 RefSeq gene 1504897 1505304 . + . ID=gene1546;Name=SOPEG_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07690;old_locus_tag=SOPEG_1447 NZ_CP006568.1 Protein Homology CDS 1504897 1505304 . + 0 ID=cds1520;Parent=gene1546;Dbxref=Genbank:WP_025244906.1;Name=WP_025244906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025244906.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1505320 1505745 . + . ID=id215;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1505380 1505748 . - . ID=gene1547;Name=SOPEG_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07695 NZ_CP006568.1 Protein Homology CDS 1505380 1505748 . - 0 ID=cds1521;Parent=gene1547;Dbxref=Genbank:WP_051419532.1;Name=WP_051419532.1;gbkey=CDS;product=transposase;protein_id=WP_051419532.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1506497 1507504 . - . ID=gene1548;Name=SOPEG_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07700;old_locus_tag=SOPEG_1449 NZ_CP006568.1 Protein Homology CDS 1506497 1507504 . - 0 ID=cds1522;Parent=gene1548;Dbxref=Genbank:WP_025244907.1;Name=WP_025244907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244907.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1507514 1508857 . - . ID=gene1549;Name=SOPEG_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07705;old_locus_tag=SOPEG_1450 NZ_CP006568.1 Protein Homology CDS 1507514 1508857 . - 0 ID=cds1523;Parent=gene1549;Dbxref=Genbank:WP_025244908.1;Name=WP_025244908.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_025244908.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1508908 1509810 . - . ID=gene1550;Name=SOPEG_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07710;old_locus_tag=SOPEG_1451 NZ_CP006568.1 Protein Homology CDS 1508908 1509810 . - 0 ID=cds1524;Parent=gene1550;Dbxref=Genbank:WP_025244909.1;Name=WP_025244909.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_025244909.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1509948 1511015 . + . ID=id216;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1510031 1510954 . + . ID=gene1551;Name=SOPEG_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07715;old_locus_tag=SOPEG_1452 NZ_CP006568.1 Protein Homology CDS 1510031 1510954 . + 0 ID=cds1525;Parent=gene1551;Dbxref=Genbank:WP_025244795.1;Name=WP_025244795.1;gbkey=CDS;product=transposase;protein_id=WP_025244795.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1511373 1511621 . - . ID=gene1552;Name=SOPEG_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07720 NZ_CP006568.1 GeneMarkS+ CDS 1511373 1511621 . - 0 ID=cds1526;Parent=gene1552;Dbxref=Genbank:WP_025244910.1;Name=WP_025244910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244910.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1511763 1512612 . + . ID=gene1553;Name=SOPEG_RS07725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07725;pseudo=true NZ_CP006568.1 Protein Homology CDS 1511763 1512612 . + 0 ID=cds1527;Parent=gene1553;exception=annotated by transcript or proteomic data;gbkey=CDS;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1512760 1512844 . + . ID=gene1554;Name=SOPEG_RS07730;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS07730;old_locus_tag=SOPEG_t1455 NZ_CP006568.1 tRNAscan-SE tRNA 1512760 1512844 . + . ID=rna26;Parent=gene1554;anticodon=(pos:1512794..1512796);gbkey=tRNA;product=tRNA-Tyr NZ_CP006568.1 tRNAscan-SE exon 1512760 1512844 . + . ID=id217;Parent=rna26;anticodon=(pos:1512794..1512796);gbkey=tRNA;product=tRNA-Tyr NZ_CP006568.1 RefSeq gene 1513135 1513941 . + . ID=gene1555;Name=SOPEG_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07735;old_locus_tag=SOPEG_1456 NZ_CP006568.1 Protein Homology CDS 1513135 1513941 . + 0 ID=cds1528;Parent=gene1555;Dbxref=Genbank:WP_025244911.1;Name=WP_025244911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244911.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1513947 1514345 . + . ID=gene1556;Name=SOPEG_RS07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07740;pseudo=true NZ_CP006568.1 Protein Homology CDS 1513947 1514345 . + 0 ID=cds1529;Parent=gene1556;gbkey=CDS;product=NTP pyrophosphohydrolase;pseudo=true;transl_except=(pos:1514175..1514177%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1514429 1516317 . - . ID=gene1557;Name=SOPEG_RS07745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07745;partial=true;pseudo=true;start_range=.,1514429 NZ_CP006568.1 Protein Homology CDS 1514429 1516317 . - 0 ID=cds1530;Parent=gene1557;Note=decatenates replicating daughter chromosomes;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=DNA topoisomerase III;pseudo=true;start_range=.,1514429;transl_except=(pos:complement(1515579..1515581)%2Caa:Other),(pos:complement(1514562..1514564)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1516488 1516823 . - . ID=gene1558;Name=SOPEG_RS07750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07750;partial=true;pseudo=true;start_range=.,1516488 NZ_CP006568.1 Protein Homology CDS 1516488 1516823 . - 0 ID=cds1531;Parent=gene1558;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1516488;transl_table=11 NZ_CP006568.1 RefSeq gene 1517048 1518901 . + . ID=gene1559;Name=SOPEG_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07755;old_locus_tag=SOPEG_1460 NZ_CP006568.1 Protein Homology CDS 1517048 1518901 . + 0 ID=cds1532;Parent=gene1559;Dbxref=Genbank:WP_025244913.1;Name=WP_025244913.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_025244913.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1519081 1520136 . + . ID=gene1560;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=SOPEG_RS07760;old_locus_tag=SOPEG_1461 NZ_CP006568.1 Protein Homology CDS 1519081 1520136 . + 0 ID=cds1533;Parent=gene1560;Dbxref=Genbank:WP_025244914.1;Name=WP_025244914.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=cytoplasmic asparaginase I;protein_id=WP_025244914.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1520093 1520751 . + . ID=gene1561;Name=SOPEG_RS07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07765;pseudo=true NZ_CP006568.1 Protein Homology CDS 1520093 1520751 . + 0 ID=cds1534;Parent=gene1561;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PncA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1520907 1521179 . - . ID=gene1562;Name=SOPEG_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07770;old_locus_tag=SOPEG_1463 NZ_CP006568.1 Protein Homology CDS 1520907 1521179 . - 0 ID=cds1535;Parent=gene1562;Dbxref=Genbank:WP_025244915.1;Name=WP_025244915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244915.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1521228 1521641 . - . ID=gene1563;Name=SOPEG_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07775;old_locus_tag=SOPEG_1464 NZ_CP006568.1 Protein Homology CDS 1521228 1521641 . - 0 ID=cds1536;Parent=gene1563;Dbxref=Genbank:WP_025244916.1;Name=WP_025244916.1;gbkey=CDS;product=methionine sulfoxide reductase B;protein_id=WP_025244916.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1521984 1522982 . + . ID=gene1564;Name=SOPEG_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07780;old_locus_tag=SOPEG_1465 NZ_CP006568.1 Protein Homology CDS 1521984 1522982 . + 0 ID=cds1537;Parent=gene1564;Dbxref=Genbank:WP_038468430.1;Name=WP_038468430.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_038468430.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1523051 1523923 . + . ID=gene1565;Name=SOPEG_RS07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07785;pseudo=true NZ_CP006568.1 Protein Homology CDS 1523051 1523923 . + 0 ID=cds1538;Parent=gene1565;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;pseudo=true;transl_except=(pos:1523084..1523086%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1524065 1524919 . - . ID=gene1566;Name=SOPEG_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07790;old_locus_tag=SOPEG_1467 NZ_CP006568.1 Protein Homology CDS 1524065 1524919 . - 0 ID=cds1539;Parent=gene1566;Dbxref=Genbank:WP_025244918.1;Name=WP_025244918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244918.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1525010 1525687 . - . ID=gene1567;Name=SOPEG_RS07795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07795;pseudo=true NZ_CP006568.1 Protein Homology CDS 1525010 1525687 . - 0 ID=cds1540;Parent=gene1567;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;pseudo=true;transl_except=(pos:complement(1525529..1525531)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1526178 1528112 . + . ID=gene1568;Name=SOPEG_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07800;old_locus_tag=SOPEG_1469 NZ_CP006568.1 Protein Homology CDS 1526178 1528112 . + 0 ID=cds1541;Parent=gene1568;Dbxref=Genbank:WP_025244919.1;Name=WP_025244919.1;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_025244919.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1528149 1529428 . + . ID=gene1569;Name=SOPEG_RS07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07805;pseudo=true NZ_CP006568.1 Protein Homology CDS 1528149 1529428 . + 0 ID=cds1542;Parent=gene1569;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1530385 1532115 . + . ID=gene1570;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=SOPEG_RS07810;old_locus_tag=SOPEG_1471 NZ_CP006568.1 Protein Homology CDS 1530385 1532115 . + 0 ID=cds1543;Parent=gene1570;Dbxref=Genbank:WP_025244920.1;Name=WP_025244920.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=potassium/proton antiporter;protein_id=WP_025244920.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1532134 1539129 . + . ID=id218;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1532529 1533146 . + . ID=gene1571;Name=SOPEG_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22625 NZ_CP006568.1 Protein Homology CDS 1532529 1533146 . + 0 ID=cds1544;Parent=gene1571;Dbxref=Genbank:WP_025244921.1;Name=WP_025244921.1;gbkey=CDS;product=transposase;protein_id=WP_025244921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1533398 1533739 . + . ID=gene1572;Name=SOPEG_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22630 NZ_CP006568.1 Protein Homology CDS 1533398 1533739 . + 0 ID=cds1545;Parent=gene1572;Dbxref=Genbank:WP_025244922.1;Name=WP_025244922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244922.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1533793 1534092 . - . ID=gene1573;Name=SOPEG_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07820;old_locus_tag=SOPEG_1473 NZ_CP006568.1 Protein Homology CDS 1533793 1534092 . - 0 ID=cds1546;Parent=gene1573;Dbxref=Genbank:WP_025244923.1;Name=WP_025244923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244923.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1534158 1534448 . + . ID=gene1574;Name=SOPEG_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07825 NZ_CP006568.1 GeneMarkS+ CDS 1534158 1534448 . + 0 ID=cds1547;Parent=gene1574;Dbxref=Genbank:WP_038468433.1;Name=WP_038468433.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468433.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1534479 1535099 . + . ID=gene1575;Name=SOPEG_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07830 NZ_CP006568.1 Protein Homology CDS 1534479 1535099 . + 0 ID=cds1548;Parent=gene1575;Dbxref=Genbank:WP_025244924.1;Name=WP_025244924.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244924.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1535096 1535374 . + . ID=gene1576;Name=SOPEG_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07835;old_locus_tag=SOPEG_1475 NZ_CP006568.1 Protein Homology CDS 1535096 1535374 . + 0 ID=cds1549;Parent=gene1576;Dbxref=Genbank:WP_025244925.1;Name=WP_025244925.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025244925.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1535643 1536566 . - . ID=gene1577;Name=SOPEG_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07840;old_locus_tag=SOPEG_1477 NZ_CP006568.1 Protein Homology CDS 1535643 1536566 . - 0 ID=cds1550;Parent=gene1577;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1536651 1537322 . + . ID=gene1578;Name=SOPEG_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07845 NZ_CP006568.1 Protein Homology CDS 1536651 1537322 . + 0 ID=cds1551;Parent=gene1578;Dbxref=Genbank:WP_025244926.1;Name=WP_025244926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1537334 1537991 . + . ID=gene1579;Name=SOPEG_RS07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07850;pseudo=true NZ_CP006568.1 Protein Homology CDS 1537334 1537991 . + 0 ID=cds1552;Parent=gene1579;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1538091 1538357 . - . ID=gene1580;Name=SOPEG_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07855 NZ_CP006568.1 GeneMarkS+ CDS 1538091 1538357 . - 0 ID=cds1553;Parent=gene1580;Dbxref=Genbank:WP_038468436.1;Name=WP_038468436.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468436.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1538356 1538607 . + . ID=gene1581;Name=SOPEG_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07860 NZ_CP006568.1 GeneMarkS+ CDS 1538356 1538607 . + 0 ID=cds1554;Parent=gene1581;Dbxref=Genbank:WP_038468439.1;Name=WP_038468439.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468439.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1539168 1545582 . + . ID=id219;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1539243 1540451 . + . ID=gene1582;Name=SOPEG_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07865;old_locus_tag=SOPEG_1480 NZ_CP006568.1 Protein Homology CDS 1539243 1540451 . + 0 ID=cds1555;Parent=gene1582;Dbxref=Genbank:WP_025244929.1;Name=WP_025244929.1;gbkey=CDS;product=transposase;protein_id=WP_025244929.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1540509 1541432 . - . ID=gene1583;Name=SOPEG_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07870;old_locus_tag=SOPEG_1481 NZ_CP006568.1 Protein Homology CDS 1540509 1541432 . - 0 ID=cds1556;Parent=gene1583;Dbxref=Genbank:WP_025244930.1;Name=WP_025244930.1;gbkey=CDS;product=transposase;protein_id=WP_025244930.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1541491 1541709 . - . ID=gene1584;Name=SOPEG_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07875 NZ_CP006568.1 Protein Homology CDS 1541491 1541709 . - 0 ID=cds1557;Parent=gene1584;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1541773 1542699 . - . ID=gene1585;Name=SOPEG_RS07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07885;pseudo=true NZ_CP006568.1 Protein Homology CDS 1541773 1542699 . - 0 ID=cds1558;Parent=gene1585;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(1542010..1542012)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1542816 1543019 . - . ID=gene1586;Name=SOPEG_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07890 NZ_CP006568.1 Protein Homology CDS 1542816 1543019 . - 0 ID=cds1559;Parent=gene1586;Dbxref=Genbank:WP_025244933.1;Name=WP_025244933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244933.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1543100 1543849 . - . ID=gene1587;Name=SOPEG_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07895;old_locus_tag=SOPEG_1484 NZ_CP006568.1 Protein Homology CDS 1543100 1543849 . - 0 ID=cds1560;Parent=gene1587;Dbxref=Genbank:WP_025244934.1;Name=WP_025244934.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244934.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1543861 1545378 . - . ID=gene1588;Name=SOPEG_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07900;old_locus_tag=SOPEG_1485 NZ_CP006568.1 Protein Homology CDS 1543861 1545378 . - 0 ID=cds1561;Parent=gene1588;Dbxref=Genbank:WP_038468442.1;Name=WP_038468442.1;gbkey=CDS;product=transposase;protein_id=WP_038468442.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1545557 1546444 . + . ID=gene1589;Name=SOPEG_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07905 NZ_CP006568.1 Protein Homology CDS 1545557 1546444 . + 0 ID=cds1562;Parent=gene1589;Dbxref=Genbank:WP_038469787.1;Name=WP_038469787.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_038469787.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1546434 1547321 . + . ID=gene1590;Name=SOPEG_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07910;old_locus_tag=SOPEG_1487 NZ_CP006568.1 Protein Homology CDS 1546434 1547321 . + 0 ID=cds1563;Parent=gene1590;Dbxref=Genbank:WP_025244937.1;Name=WP_025244937.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025244937.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1547331 1548146 . + . ID=gene1591;Name=SOPEG_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07915;pseudo=true NZ_CP006568.1 Protein Homology CDS 1547331 1548146 . + 0 ID=cds1564;Parent=gene1591;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;pseudo=true;transl_except=(pos:1547742..1547744%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1548149 1549195 . + . ID=gene1592;Name=SOPEG_RS07920;end_range=1549195,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07920;old_locus_tag=SOPEG_1489;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1548149 1549195 . + 0 ID=cds1565;Parent=gene1592;end_range=1549195,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ABC transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1549221 1550543 . + . ID=gene1593;Name=SOPEG_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07925;old_locus_tag=SOPEG_1490 NZ_CP006568.1 Protein Homology CDS 1549221 1550543 . + 0 ID=cds1566;Parent=gene1593;Dbxref=Genbank:WP_025244939.1;Name=WP_025244939.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_025244939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1550754 1551656 . - . ID=gene1594;Name=SOPEG_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07930;old_locus_tag=SOPEG_1491 NZ_CP006568.1 Protein Homology CDS 1550754 1551656 . - 0 ID=cds1567;Parent=gene1594;Dbxref=Genbank:WP_025244940.1;Name=WP_025244940.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_025244940.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1551761 1554989 . + . ID=gene1595;Name=SOPEG_RS07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07935;pseudo=true NZ_CP006568.1 Protein Homology CDS 1551761 1554989 . + 0 ID=cds1568;Parent=gene1595;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ferredoxin:oxidoreductase FAD/NAD(P)-binding protein;pseudo=true;transl_except=(pos:1553306..1553308%2Caa:Other),(pos:1554530..1554532%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1555162 1556403 . + . ID=gene1596;Name=SOPEG_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07940 NZ_CP006568.1 Protein Homology CDS 1555162 1556403 . + 0 ID=cds1569;Parent=gene1596;Dbxref=Genbank:WP_025244941.1;Name=WP_025244941.1;gbkey=CDS;product=Short chain fatty acid transporter;protein_id=WP_025244941.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1556689 1556943 . + . ID=gene1597;Name=SOPEG_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07945 NZ_CP006568.1 GeneMarkS+ CDS 1556689 1556943 . + 0 ID=cds1570;Parent=gene1597;Dbxref=Genbank:WP_038468446.1;Name=WP_038468446.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468446.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1556976 1557914 . - . ID=gene1598;Name=SOPEG_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07950 NZ_CP006568.1 Protein Homology CDS 1556976 1557914 . - 0 ID=cds1571;Parent=gene1598;Dbxref=Genbank:WP_038469793.1;Name=WP_038469793.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_038469793.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1558437 1559078 . - . ID=gene1599;Name=SOPEG_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07955;old_locus_tag=SOPEG_1495 NZ_CP006568.1 Protein Homology CDS 1558437 1559078 . - 0 ID=cds1572;Parent=gene1599;Dbxref=Genbank:WP_025244943.1;Name=WP_025244943.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_025244943.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1559272 1560350 . + . ID=gene1600;Name=SOPEG_RS07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS07960;pseudo=true NZ_CP006568.1 Protein Homology CDS 1559272 1560350 . + 0 ID=cds1573;Parent=gene1600;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1560562 1560759 . + . ID=gene1601;Name=SOPEG_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22635 NZ_CP006568.1 Protein Homology CDS 1560562 1560759 . + 0 ID=cds1574;Parent=gene1601;Dbxref=Genbank:WP_025244944.1;Name=WP_025244944.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244944.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1560919 1561419 . - . ID=gene1602;Name=SOPEG_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22640 NZ_CP006568.1 GeneMarkS+ CDS 1560919 1561419 . - 0 ID=cds1575;Parent=gene1602;Dbxref=Genbank:WP_025244945.1;Name=WP_025244945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244945.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1561485 1563293 . - . ID=gene1603;Name=SOPEG_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07970;old_locus_tag=SOPEG_1498 NZ_CP006568.1 Protein Homology CDS 1561485 1563293 . - 0 ID=cds1576;Parent=gene1603;Dbxref=Genbank:WP_025244946.1;Name=WP_025244946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244946.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1563357 1564004 . - . ID=gene1604;Name=SOPEG_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07975;old_locus_tag=SOPEG_1499 NZ_CP006568.1 Protein Homology CDS 1563357 1564004 . - 0 ID=cds1577;Parent=gene1604;Dbxref=Genbank:WP_038468449.1;Name=WP_038468449.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468449.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1564065 1565444 . - . ID=gene1605;Name=SOPEG_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07980;old_locus_tag=SOPEG_1500 NZ_CP006568.1 Protein Homology CDS 1564065 1565444 . - 0 ID=cds1578;Parent=gene1605;Dbxref=Genbank:WP_025244948.1;Name=WP_025244948.1;gbkey=CDS;product=glucarate transporter;protein_id=WP_025244948.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1565810 1566049 . - . ID=gene1606;Name=SOPEG_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07985 NZ_CP006568.1 GeneMarkS+ CDS 1565810 1566049 . - 0 ID=cds1579;Parent=gene1606;Dbxref=Genbank:WP_025244949.1;Name=WP_025244949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244949.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1565981 1569805 . + . ID=id220;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1566116 1566358 . + . ID=gene1607;Name=SOPEG_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22645 NZ_CP006568.1 Protein Homology CDS 1566116 1566358 . + 0 ID=cds1580;Parent=gene1607;Dbxref=Genbank:WP_051419535.1;Name=WP_051419535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419535.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1566355 1566555 . + . ID=gene1608;Name=SOPEG_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22650 NZ_CP006568.1 Protein Homology CDS 1566355 1566555 . + 0 ID=cds1581;Parent=gene1608;Dbxref=Genbank:WP_051419537.1;Name=WP_051419537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419537.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1566753 1566872 . - . ID=gene1609;Name=SOPEG_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS07995 NZ_CP006568.1 Protein Homology CDS 1566753 1566872 . - 0 ID=cds1582;Parent=gene1609;Dbxref=Genbank:WP_038469797.1;Name=WP_038469797.1;gbkey=CDS;product=transposase;protein_id=WP_038469797.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1566933 1567179 . - . ID=gene1610;Name=SOPEG_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08000;partial=true;pseudo=true;start_range=.,1566933 NZ_CP006568.1 Protein Homology CDS 1566933 1567179 . - 0 ID=cds1583;Parent=gene1610;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1566933;transl_table=11 NZ_CP006568.1 RefSeq gene 1567326 1568095 . - . ID=gene1611;Name=SOPEG_RS08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08005;pseudo=true NZ_CP006568.1 Protein Homology CDS 1567326 1568095 . - 0 ID=cds1584;Parent=gene1611;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1568107 1569531 . - . ID=gene1612;Name=SOPEG_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08010 NZ_CP006568.1 Protein Homology CDS 1568107 1569531 . - 0 ID=cds1585;Parent=gene1612;Dbxref=Genbank:WP_025244950.1;Name=WP_025244950.1;gbkey=CDS;product=transposase;protein_id=WP_025244950.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1569977 1570945 . - . ID=gene1613;Name=SOPEG_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08015;old_locus_tag=SOPEG_1505 NZ_CP006568.1 Protein Homology CDS 1569977 1570945 . - 0 ID=cds1586;Parent=gene1613;Dbxref=Genbank:WP_025244951.1;Name=WP_025244951.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_025244951.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1570935 1572596 . - . ID=gene1614;Name=SOPEG_RS08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08020;pseudo=true NZ_CP006568.1 Protein Homology CDS 1570935 1572596 . - 0 ID=cds1587;Parent=gene1614;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:complement(1572105..1572107)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1572580 1573139 . - . ID=gene1615;Name=SOPEG_RS08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08025;pseudo=true NZ_CP006568.1 Protein Homology CDS 1572580 1573139 . - 0 ID=cds1588;Parent=gene1615;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA invertase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1573457 1575354 . + . ID=id221;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1573533 1574306 . + . ID=gene1616;Name=SOPEG_RS08030;end_range=1574306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08030;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1573533 1574306 . + 0 ID=cds1589;Parent=gene1616;end_range=1574306,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1574351 1575274 . - . ID=gene1617;Name=SOPEG_RS08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08035;pseudo=true NZ_CP006568.1 Protein Homology CDS 1574351 1575274 . - 0 ID=cds1590;Parent=gene1617;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(1575167..1575169)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1575513 1576487 . - . ID=gene1618;Name=SOPEG_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08040;old_locus_tag=SOPEG_1510 NZ_CP006568.1 Protein Homology CDS 1575513 1576487 . - 0 ID=cds1591;Parent=gene1618;Dbxref=Genbank:WP_025244953.1;Name=WP_025244953.1;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_025244953.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1576999 1577292 . + . ID=gene1619;Name=SOPEG_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08045 NZ_CP006568.1 GeneMarkS+ CDS 1576999 1577292 . + 0 ID=cds1592;Parent=gene1619;Dbxref=Genbank:WP_038468452.1;Name=WP_038468452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468452.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1577304 1578088 . + . ID=gene1620;Name=SOPEG_RS08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08050;pseudo=true NZ_CP006568.1 Protein Homology CDS 1577304 1578088 . + 0 ID=cds1593;Parent=gene1620;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nitrate ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1578095 1578853 . + . ID=gene1621;Name=SOPEG_RS08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08055;partial=true;pseudo=true;start_range=.,1578095 NZ_CP006568.1 Protein Homology CDS 1578095 1578853 . + 0 ID=cds1594;Parent=gene1621;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1578095;transl_table=11 NZ_CP006568.1 RefSeq gene 1579019 1579387 . + . ID=gene1622;Name=SOPEG_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08060 NZ_CP006568.1 GeneMarkS+ CDS 1579019 1579387 . + 0 ID=cds1595;Parent=gene1622;Dbxref=Genbank:WP_038468455.1;Name=WP_038468455.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468455.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1579391 1579651 . + . ID=gene1623;Name=SOPEG_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22655 NZ_CP006568.1 GeneMarkS+ CDS 1579391 1579651 . + 0 ID=cds1596;Parent=gene1623;Dbxref=Genbank:WP_051419538.1;Name=WP_051419538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419538.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1579797 1580981 . + . ID=gene1624;Name=SOPEG_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08065 NZ_CP006568.1 Protein Homology CDS 1579797 1580981 . + 0 ID=cds1597;Parent=gene1624;Dbxref=Genbank:WP_051419539.1;Name=WP_051419539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419539.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1581202 1582353 . - . ID=gene1625;Name=SOPEG_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08070 NZ_CP006568.1 Protein Homology CDS 1581202 1582353 . - 0 ID=cds1598;Parent=gene1625;Dbxref=Genbank:WP_051419540.1;Name=WP_051419540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419540.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1582716 1583433 . + . ID=gene1626;Name=SOPEG_RS08075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08075;pseudo=true NZ_CP006568.1 Protein Homology CDS 1582716 1583433 . + 0 ID=cds1599;Parent=gene1626;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hydrolase;pseudo=true;transl_except=(pos:1583004..1583006%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1583476 1584155 . + . ID=gene1627;Name=SOPEG_RS08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08080;pseudo=true NZ_CP006568.1 Protein Homology CDS 1583476 1584155 . + 0 ID=cds1600;Parent=gene1627;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1584152 1585549 . + . ID=gene1628;Name=SOPEG_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08085;old_locus_tag=SOPEG_1517 NZ_CP006568.1 Protein Homology CDS 1584152 1585549 . + 0 ID=cds1601;Parent=gene1628;Dbxref=Genbank:WP_025244957.1;Name=WP_025244957.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_025244957.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1586047 1586835 . + . ID=gene1629;Name=SOPEG_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08090;old_locus_tag=SOPEG_1518 NZ_CP006568.1 Protein Homology CDS 1586047 1586835 . + 0 ID=cds1602;Parent=gene1629;Dbxref=Genbank:WP_038469806.1;Name=WP_038469806.1;gbkey=CDS;product=hemin ABC transporter substrate-binding protein;protein_id=WP_038469806.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1586841 1587833 . + . ID=gene1630;Name=SOPEG_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08095;old_locus_tag=SOPEG_1519 NZ_CP006568.1 Protein Homology CDS 1586841 1587833 . + 0 ID=cds1603;Parent=gene1630;Dbxref=Genbank:WP_025244959.1;Name=WP_025244959.1;gbkey=CDS;product=iron ABC transporter;protein_id=WP_025244959.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1587841 1588501 . + . ID=gene1631;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=pseudogene;locus_tag=SOPEG_RS08100;pseudo=true NZ_CP006568.1 Protein Homology CDS 1587841 1588501 . + 0 ID=cds1604;Parent=gene1631;Note=with HmuTU is involved in the transport of hemin;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=hmuV;product=hemin importer ATP-binding subunit;pseudo=true;transl_except=(pos:1588202..1588204%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1588600 1589439 . - . ID=gene1632;Name=SOPEG_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08105;old_locus_tag=SOPEG_1521 NZ_CP006568.1 Protein Homology CDS 1588600 1589439 . - 0 ID=cds1605;Parent=gene1632;Dbxref=Genbank:WP_025244961.1;Name=WP_025244961.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_025244961.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1589455 1589727 . + . ID=gene1633;Name=SOPEG_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08110 NZ_CP006568.1 GeneMarkS+ CDS 1589455 1589727 . + 0 ID=cds1606;Parent=gene1633;Dbxref=Genbank:WP_025244962.1;Name=WP_025244962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1589784 1590020 . + . ID=gene1634;Name=SOPEG_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08115 NZ_CP006568.1 GeneMarkS+ CDS 1589784 1590020 . + 0 ID=cds1607;Parent=gene1634;Dbxref=Genbank:WP_025244963.1;Name=WP_025244963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244963.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1590072 1592053 . - . ID=gene1635;Name=SOPEG_RS08120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08120;pseudo=true NZ_CP006568.1 Protein Homology CDS 1590072 1592053 . - 0 ID=cds1608;Parent=gene1635;exception=annotated by transcript or proteomic data;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_except=(pos:complement(1591217..1591219)%2Caa:Other),(pos:complement(1590740..1590742)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1592374 1592643 . + . ID=gene1636;Name=SOPEG_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08125 NZ_CP006568.1 GeneMarkS+ CDS 1592374 1592643 . + 0 ID=cds1609;Parent=gene1636;Dbxref=Genbank:WP_038468458.1;Name=WP_038468458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468458.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1593728 1594540 . + . ID=gene1637;Name=SOPEG_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08130;old_locus_tag=SOPEG_1523 NZ_CP006568.1 Protein Homology CDS 1593728 1594540 . + 0 ID=cds1610;Parent=gene1637;Dbxref=Genbank:WP_025244964.1;Name=WP_025244964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244964.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1594537 1595004 . + . ID=gene1638;Name=SOPEG_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08135;old_locus_tag=SOPEG_1524 NZ_CP006568.1 GeneMarkS+ CDS 1594537 1595004 . + 0 ID=cds1611;Parent=gene1638;Dbxref=Genbank:WP_025244965.1;Name=WP_025244965.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244965.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1595066 1595656 . + . ID=gene1639;Name=SOPEG_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22660 NZ_CP006568.1 Protein Homology CDS 1595066 1595656 . + 0 ID=cds1612;Parent=gene1639;Dbxref=Genbank:WP_051419541.1;Name=WP_051419541.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419541.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1595664 1596029 . + . ID=gene1640;Name=SOPEG_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22665 NZ_CP006568.1 Protein Homology CDS 1595664 1596029 . + 0 ID=cds1613;Parent=gene1640;Dbxref=Genbank:WP_051419542.1;Name=WP_051419542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419542.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1596011 1596742 . + . ID=gene1641;Name=SOPEG_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22670 NZ_CP006568.1 Protein Homology CDS 1596011 1596742 . + 0 ID=cds1614;Parent=gene1641;Dbxref=Genbank:WP_051419543.1;Name=WP_051419543.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419543.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1596764 1597884 . - . ID=gene1642;Name=SOPEG_RS08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08145;pseudo=true NZ_CP006568.1 Protein Homology CDS 1596764 1597884 . - 0 ID=cds1615;Parent=gene1642;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldehyde dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1598214 1599533 . + . ID=id222;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1598288 1599496 . + . ID=gene1643;Name=SOPEG_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08150;old_locus_tag=SOPEG_1527 NZ_CP006568.1 Protein Homology CDS 1598288 1599496 . + 0 ID=cds1616;Parent=gene1643;Dbxref=Genbank:WP_025244966.1;Name=WP_025244966.1;gbkey=CDS;product=transposase;protein_id=WP_025244966.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1599597 1600367 . - . ID=gene1644;Name=SOPEG_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08155 NZ_CP006568.1 Protein Homology CDS 1599597 1600367 . - 0 ID=cds1617;Parent=gene1644;Dbxref=Genbank:WP_025244967.1;Name=WP_025244967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244967.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1600567 1603152 . + . ID=id223;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1600690 1601439 . - . ID=gene1645;Name=SOPEG_RS08160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08160;pseudo=true NZ_CP006568.1 Protein Homology CDS 1600690 1601439 . - 0 ID=cds1618;Parent=gene1645;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1601239..1601241)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1601451 1602110 . - . ID=gene1646;Name=SOPEG_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08165 NZ_CP006568.1 Protein Homology CDS 1601451 1602110 . - 0 ID=cds1619;Parent=gene1646;Dbxref=Genbank:WP_051419544.1;Name=WP_051419544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419544.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1602223 1602969 . - . ID=gene1647;Name=SOPEG_RS08170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08170;partial=true;pseudo=true;start_range=.,1602223 NZ_CP006568.1 Protein Homology CDS 1602223 1602969 . - 0 ID=cds1620;Parent=gene1647;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1602223;transl_table=11 NZ_CP006568.1 RefSeq gene 1603096 1603632 . - . ID=gene1648;Name=SOPEG_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08175 NZ_CP006568.1 Protein Homology CDS 1603096 1603632 . - 0 ID=cds1621;Parent=gene1648;Dbxref=Genbank:WP_025244968.1;Name=WP_025244968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1603850 1605435 . - . ID=gene1649;Name=SOPEG_RS08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08180;pseudo=true NZ_CP006568.1 Protein Homology CDS 1603850 1605435 . - 0 ID=cds1622;Parent=gene1649;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug MFS transporter;pseudo=true;transl_except=(pos:complement(1605275..1605277)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1605422 1606546 . - . ID=gene1650;Name=SOPEG_RS08185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08185;pseudo=true NZ_CP006568.1 Protein Homology CDS 1605422 1606546 . - 0 ID=cds1623;Parent=gene1650;gbkey=CDS;product=secretion protein HlyD;pseudo=true;transl_except=(pos:complement(1606136..1606138)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1606543 1606998 . - . ID=gene1651;Name=SOPEG_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08190;old_locus_tag=SOPEG_1534 NZ_CP006568.1 Protein Homology CDS 1606543 1606998 . - 0 ID=cds1624;Parent=gene1651;Dbxref=Genbank:WP_025244969.1;Name=WP_025244969.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_025244969.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1607181 1608011 . + . ID=gene1652;Name=SOPEG_RS08195;end_range=1608011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08195;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1607181 1608011 . + 0 ID=cds1625;Parent=gene1652;end_range=1608011,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=multidrug ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1607999 1608483 . + . ID=id224;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1608075 1608518 . + . ID=gene1653;Name=SOPEG_RS08200;end_range=1608518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08200;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1608075 1608518 . + 0 ID=cds1626;Parent=gene1653;end_range=1608518,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1609280 1610614 . + . ID=gene1654;Name=SOPEG_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08205;old_locus_tag=SOPEG_1537 NZ_CP006568.1 Protein Homology CDS 1609280 1610614 . + 0 ID=cds1627;Parent=gene1654;Dbxref=Genbank:WP_025244972.1;Name=WP_025244972.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_025244972.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1610755 1610830 . + . ID=gene1655;Name=SOPEG_RS08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS08210;old_locus_tag=SOPEG_t1538 NZ_CP006568.1 tRNAscan-SE tRNA 1610755 1610830 . + . ID=rna27;Parent=gene1655;anticodon=(pos:1610788..1610790);gbkey=tRNA;product=tRNA-Asn NZ_CP006568.1 tRNAscan-SE exon 1610755 1610830 . + . ID=id225;Parent=rna27;anticodon=(pos:1610788..1610790);gbkey=tRNA;product=tRNA-Asn NZ_CP006568.1 RefSeq gene 1610992 1612242 . + . ID=gene1656;Name=SOPEG_RS08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08215;pseudo=true NZ_CP006568.1 Protein Homology CDS 1610992 1612242 . + 0 ID=cds1628;Parent=gene1656;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:1611190..1611192%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1612288 1617236 . + . ID=id226;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1612476 1613399 . + . ID=gene1657;Name=SOPEG_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08220;old_locus_tag=SOPEG_1541 NZ_CP006568.1 Protein Homology CDS 1612476 1613399 . + 0 ID=cds1629;Parent=gene1657;Dbxref=Genbank:WP_025244973.1;Name=WP_025244973.1;gbkey=CDS;product=transposase;protein_id=WP_025244973.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1613441 1614598 . - . ID=gene1658;Name=SOPEG_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08225 NZ_CP006568.1 Protein Homology CDS 1613441 1614598 . - 0 ID=cds1630;Parent=gene1658;Dbxref=Genbank:WP_025244974.1;Name=WP_025244974.1;gbkey=CDS;product=transposase;protein_id=WP_025244974.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1614753 1615502 . - . ID=gene1659;Name=SOPEG_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08230;old_locus_tag=SOPEG_1542 NZ_CP006568.1 Protein Homology CDS 1614753 1615502 . - 0 ID=cds1631;Parent=gene1659;Dbxref=Genbank:WP_025244975.1;Name=WP_025244975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244975.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1615514 1617031 . - . ID=gene1660;Name=SOPEG_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08235;old_locus_tag=SOPEG_1543 NZ_CP006568.1 Protein Homology CDS 1615514 1617031 . - 0 ID=cds1632;Parent=gene1660;Dbxref=Genbank:WP_025244976.1;Name=WP_025244976.1;gbkey=CDS;product=transposase;protein_id=WP_025244976.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1617349 1618104 . + . ID=gene1661;Name=SOPEG_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08240 NZ_CP006568.1 Protein Homology CDS 1617349 1618104 . + 0 ID=cds1633;Parent=gene1661;Dbxref=Genbank:WP_025244977.1;Name=WP_025244977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244977.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1618160 1618435 . + . ID=gene1662;Name=SOPEG_RS08245;end_range=1618435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08245;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1618160 1618435 . + 0 ID=cds1634;Parent=gene1662;end_range=1618435,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=selenoprotein W-related protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1618670 1619275 . - . ID=gene1663;Name=SOPEG_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08250 NZ_CP006568.1 Protein Homology CDS 1618670 1619275 . - 0 ID=cds1635;Parent=gene1663;Dbxref=Genbank:WP_051419545.1;Name=WP_051419545.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419545.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1619297 1619545 . - . ID=gene1664;Name=SOPEG_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22675 NZ_CP006568.1 Protein Homology CDS 1619297 1619545 . - 0 ID=cds1636;Parent=gene1664;Dbxref=Genbank:WP_051419546.1;Name=WP_051419546.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419546.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1619544 1620607 . + . ID=id227;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1619604 1620527 . - . ID=gene1665;Name=SOPEG_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08255;old_locus_tag=SOPEG_1547 NZ_CP006568.1 Protein Homology CDS 1619604 1620527 . - 0 ID=cds1637;Parent=gene1665;Dbxref=Genbank:WP_025244979.1;Name=WP_025244979.1;gbkey=CDS;product=transposase;protein_id=WP_025244979.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1620592 1621038 . - . ID=gene1666;Name=SOPEG_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08260 NZ_CP006568.1 Protein Homology CDS 1620592 1621038 . - 0 ID=cds1638;Parent=gene1666;Dbxref=Genbank:WP_025244980.1;Name=WP_025244980.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244980.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1621108 1621434 . - . ID=gene1667;Name=SOPEG_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22680 NZ_CP006568.1 Protein Homology CDS 1621108 1621434 . - 0 ID=cds1639;Parent=gene1667;Dbxref=Genbank:WP_051419547.1;Name=WP_051419547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419547.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1621427 1621813 . - . ID=gene1668;Name=SOPEG_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22685 NZ_CP006568.1 Protein Homology CDS 1621427 1621813 . - 0 ID=cds1640;Parent=gene1668;Dbxref=Genbank:WP_051419548.1;Name=WP_051419548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419548.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1621819 1622394 . - . ID=gene1669;Name=SOPEG_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22690 NZ_CP006568.1 Protein Homology CDS 1621819 1622394 . - 0 ID=cds1641;Parent=gene1669;Dbxref=Genbank:WP_025244983.1;Name=WP_025244983.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1622451 1622855 . - . ID=gene1670;Name=SOPEG_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08270 NZ_CP006568.1 Protein Homology CDS 1622451 1622855 . - 0 ID=cds1642;Parent=gene1670;Dbxref=Genbank:WP_025244984.1;Name=WP_025244984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244984.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1623130 1623351 . + . ID=gene1671;Name=SOPEG_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08275 NZ_CP006568.1 GeneMarkS+ CDS 1623130 1623351 . + 0 ID=cds1643;Parent=gene1671;Dbxref=Genbank:WP_038468462.1;Name=WP_038468462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468462.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1623408 1624421 . - . ID=gene1672;Name=SOPEG_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08280 NZ_CP006568.1 Protein Homology CDS 1623408 1624421 . - 0 ID=cds1644;Parent=gene1672;Dbxref=Genbank:WP_025244986.1;Name=WP_025244986.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244986.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1624513 1625205 . - . ID=gene1673;Name=SOPEG_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08285 NZ_CP006568.1 Protein Homology CDS 1624513 1625205 . - 0 ID=cds1645;Parent=gene1673;Dbxref=Genbank:WP_051419549.1;Name=WP_051419549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419549.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1625234 1625467 . + . ID=gene1674;Name=SOPEG_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08290 NZ_CP006568.1 Protein Homology CDS 1625234 1625467 . + 0 ID=cds1646;Parent=gene1674;Dbxref=Genbank:WP_025244988.1;Name=WP_025244988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244988.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1625495 1627078 . + . ID=gene1675;Name=SOPEG_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08295;old_locus_tag=SOPEG_1553 NZ_CP006568.1 Protein Homology CDS 1625495 1627078 . + 0 ID=cds1647;Parent=gene1675;Dbxref=Genbank:WP_025244989.1;Name=WP_025244989.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244989.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1627176 1627841 . + . ID=gene1676;Name=SOPEG_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08300 NZ_CP006568.1 Protein Homology CDS 1627176 1627841 . + 0 ID=cds1648;Parent=gene1676;Dbxref=Genbank:WP_051419551.1;Name=WP_051419551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419551.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1628526 1629224 . + . ID=gene1677;Name=SOPEG_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08305;old_locus_tag=SOPEG_1555 NZ_CP006568.1 Protein Homology CDS 1628526 1629224 . + 0 ID=cds1649;Parent=gene1677;Dbxref=Genbank:WP_025244990.1;Name=WP_025244990.1;gbkey=CDS;product=thiaminase;protein_id=WP_025244990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1629221 1629976 . + . ID=gene1678;Name=SOPEG_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08310;old_locus_tag=SOPEG_1556 NZ_CP006568.1 Protein Homology CDS 1629221 1629976 . + 0 ID=cds1650;Parent=gene1678;Dbxref=Genbank:WP_051419553.1;Name=WP_051419553.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_051419553.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1629973 1630743 . + . ID=gene1679;Name=SOPEG_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08315;old_locus_tag=SOPEG_1557 NZ_CP006568.1 Protein Homology CDS 1629973 1630743 . + 0 ID=cds1651;Parent=gene1679;Dbxref=Genbank:WP_025244992.1;Name=WP_025244992.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025244992.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1630769 1631698 . + . ID=gene1680;Name=SOPEG_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08320;old_locus_tag=SOPEG_1558 NZ_CP006568.1 Protein Homology CDS 1630769 1631698 . + 0 ID=cds1652;Parent=gene1680;Dbxref=Genbank:WP_025244993.1;Name=WP_025244993.1;gbkey=CDS;product=thiamine biosynthesis protein;protein_id=WP_025244993.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1631754 1632743 . - . ID=gene1681;Name=SOPEG_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08325;old_locus_tag=SOPEG_1559 NZ_CP006568.1 Protein Homology CDS 1631754 1632743 . - 0 ID=cds1653;Parent=gene1681;Dbxref=Genbank:WP_025244994.1;Name=WP_025244994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244994.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1632824 1633722 . + . ID=gene1682;Name=SOPEG_RS08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08330;pseudo=true NZ_CP006568.1 Protein Homology CDS 1632824 1633722 . + 0 ID=cds1654;Parent=gene1682;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1634025 1635423 . + . ID=gene1683;Name=SOPEG_RS08335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08335;pseudo=true NZ_CP006568.1 Protein Homology CDS 1634025 1635423 . + 0 ID=cds1655;Parent=gene1683;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_except=(pos:1634505..1634507%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1635545 1637649 . - . ID=gene1684;Name=SOPEG_RS08340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08340;pseudo=true NZ_CP006568.1 Protein Homology CDS 1635545 1637649 . - 0 ID=cds1656;Parent=gene1684;exception=annotated by transcript or proteomic data;gbkey=CDS;product=colicin V synthesis protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1637639 1638916 . - . ID=gene1685;Name=SOPEG_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08345;old_locus_tag=SOPEG_1563 NZ_CP006568.1 Protein Homology CDS 1637639 1638916 . - 0 ID=cds1657;Parent=gene1685;Dbxref=Genbank:WP_025244995.1;Name=WP_025244995.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_025244995.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1639654 1639881 . + . ID=gene1686;Name=SOPEG_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08350;old_locus_tag=SOPEG_1564 NZ_CP006568.1 Protein Homology CDS 1639654 1639881 . + 0 ID=cds1658;Parent=gene1686;Dbxref=Genbank:WP_025244996.1;Name=WP_025244996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244996.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1639964 1641213 . - . ID=gene1687;Name=SOPEG_RS08355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08355;pseudo=true NZ_CP006568.1 Protein Homology CDS 1639964 1641213 . - 0 ID=cds1659;Parent=gene1687;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1641788 1642480 . + . ID=gene1688;Name=SOPEG_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08360;old_locus_tag=SOPEG_1566 NZ_CP006568.1 Protein Homology CDS 1641788 1642480 . + 0 ID=cds1660;Parent=gene1688;Dbxref=Genbank:WP_025244997.1;Name=WP_025244997.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244997.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1642502 1643197 . + . ID=gene1689;Name=SOPEG_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08365 NZ_CP006568.1 Protein Homology CDS 1642502 1643197 . + 0 ID=cds1661;Parent=gene1689;Dbxref=Genbank:WP_025244998.1;Name=WP_025244998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244998.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1643208 1644167 . + . ID=gene1690;Name=SOPEG_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08370;old_locus_tag=SOPEG_1568 NZ_CP006568.1 Protein Homology CDS 1643208 1644167 . + 0 ID=cds1662;Parent=gene1690;Dbxref=Genbank:WP_025244999.1;Name=WP_025244999.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025244999.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1644297 1645571 . + . ID=gene1691;Name=SOPEG_RS08375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08375;pseudo=true NZ_CP006568.1 Protein Homology CDS 1644297 1645571 . + 0 ID=cds1663;Parent=gene1691;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1645628 1646113 . - . ID=gene1692;Name=SOPEG_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08380 NZ_CP006568.1 Protein Homology CDS 1645628 1646113 . - 0 ID=cds1664;Parent=gene1692;Dbxref=Genbank:WP_038468466.1;Name=WP_038468466.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_038468466.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1646307 1651539 . + . ID=id228;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1646463 1647980 . + . ID=gene1693;Name=SOPEG_RS08385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08385;pseudo=true NZ_CP006568.1 Protein Homology CDS 1646463 1647980 . + 0 ID=cds1665;Parent=gene1693;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:1647420..1647422%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1647992 1648741 . + . ID=gene1694;Name=SOPEG_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08390;old_locus_tag=SOPEG_1572 NZ_CP006568.1 Protein Homology CDS 1647992 1648741 . + 0 ID=cds1666;Parent=gene1694;Dbxref=Genbank:WP_025245000.1;Name=WP_025245000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245000.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1648943 1650280 . + . ID=gene1695;Name=SOPEG_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08395 NZ_CP006568.1 Protein Homology CDS 1648943 1650280 . + 0 ID=cds1667;Parent=gene1695;Dbxref=Genbank:WP_025245001.1;Name=WP_025245001.1;gbkey=CDS;product=transposase;protein_id=WP_025245001.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1650190 1651398 . + . ID=gene1696;Name=SOPEG_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08400;old_locus_tag=SOPEG_1574 NZ_CP006568.1 Protein Homology CDS 1650190 1651398 . + 0 ID=cds1668;Parent=gene1696;Dbxref=Genbank:WP_025245002.1;Name=WP_025245002.1;gbkey=CDS;product=transposase;protein_id=WP_025245002.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1651622 1652883 . + . ID=id229;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1651994 1652848 . - . ID=gene1697;Name=SOPEG_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08405 NZ_CP006568.1 Protein Homology CDS 1651994 1652848 . - 0 ID=cds1669;Parent=gene1697;Dbxref=Genbank:WP_051419555.1;Name=WP_051419555.1;gbkey=CDS;product=transposase;protein_id=WP_051419555.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1653015 1654442 . - . ID=gene1698;Name=SOPEG_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08410 NZ_CP006568.1 Protein Homology CDS 1653015 1654442 . - 0 ID=cds1670;Parent=gene1698;Dbxref=Genbank:WP_051419558.1;Name=WP_051419558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419558.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1653092 1654622 . + . ID=id230;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1654746 1655081 . + . ID=gene1699;Name=SOPEG_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08415;old_locus_tag=SOPEG_1578 NZ_CP006568.1 Protein Homology CDS 1654746 1655081 . + 0 ID=cds1671;Parent=gene1699;Dbxref=Genbank:WP_025245004.1;Name=WP_025245004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245004.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1655113 1655302 . + . ID=id231;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 1655389 1656273 . + . ID=id232;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1655716 1655982 . - . ID=gene1700;Name=SOPEG_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08425 NZ_CP006568.1 GeneMarkS+ CDS 1655716 1655982 . - 0 ID=cds1672;Parent=gene1700;Dbxref=Genbank:WP_025245005.1;Name=WP_025245005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245005.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1656047 1656517 . + . ID=gene1701;Name=SOPEG_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08430;old_locus_tag=SOPEG_1580 NZ_CP006568.1 Protein Homology CDS 1656047 1656517 . + 0 ID=cds1673;Parent=gene1701;Dbxref=Genbank:WP_025245006.1;Name=WP_025245006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245006.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1656365 1656538 . + . ID=id233;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1656521 1656775 . - . ID=gene1702;Name=SOPEG_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08435 NZ_CP006568.1 Protein Homology CDS 1656521 1656775 . - 0 ID=cds1674;Parent=gene1702;Dbxref=Genbank:WP_025245007.1;Name=WP_025245007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245007.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1657534 1658599 . + . ID=id234;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1657612 1658535 . + . ID=gene1703;Name=SOPEG_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08440;old_locus_tag=SOPEG_1583 NZ_CP006568.1 Protein Homology CDS 1657612 1658535 . + 0 ID=cds1675;Parent=gene1703;Dbxref=Genbank:WP_025245008.1;Name=WP_025245008.1;gbkey=CDS;product=transposase;protein_id=WP_025245008.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1658613 1658930 . + . ID=gene1704;Name=SOPEG_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08445 NZ_CP006568.1 Protein Homology CDS 1658613 1658930 . + 0 ID=cds1676;Parent=gene1704;Dbxref=Genbank:WP_051419560.1;Name=WP_051419560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419560.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1658950 1660009 . + . ID=id235;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1659010 1659936 . - . ID=gene1705;Name=SOPEG_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08450;old_locus_tag=SOPEG_1584 NZ_CP006568.1 Protein Homology CDS 1659010 1659936 . - 0 ID=cds1677;Parent=gene1705;Dbxref=Genbank:WP_025245009.1;Name=WP_025245009.1;gbkey=CDS;product=transposase;protein_id=WP_025245009.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1660056 1660499 . + . ID=gene1706;Name=SOPEG_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08455 NZ_CP006568.1 Protein Homology CDS 1660056 1660499 . + 0 ID=cds1678;Parent=gene1706;Dbxref=Genbank:WP_051419562.1;Name=WP_051419562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419562.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1660625 1660914 . - . ID=gene1707;Name=SOPEG_RS08460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08460;pseudo=true NZ_CP006568.1 Protein Homology CDS 1660625 1660914 . - 0 ID=cds1679;Parent=gene1707;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1661177 1662238 . - . ID=gene1708;Name=SOPEG_RS08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08465;old_locus_tag=SOPEG_1586;partial=true;pseudo=true;start_range=.,1661177 NZ_CP006568.1 Protein Homology CDS 1661177 1662238 . - 0 ID=cds1680;Parent=gene1708;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=L%2CD-transpeptidase;pseudo=true;start_range=.,1661177;transl_table=11 NZ_CP006568.1 RefSeq gene 1662441 1663349 . + . ID=gene1709;Name=SOPEG_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08470;old_locus_tag=SOPEG_1587 NZ_CP006568.1 Protein Homology CDS 1662441 1663349 . + 0 ID=cds1681;Parent=gene1709;Dbxref=Genbank:WP_025245012.1;Name=WP_025245012.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245012.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1663582 1664188 . + . ID=gene1710;Name=SOPEG_RS08475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08475;pseudo=true NZ_CP006568.1 Protein Homology CDS 1663582 1664188 . + 0 ID=cds1682;Parent=gene1710;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospholipase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1664250 1664474 . - . ID=gene1711;Name=SOPEG_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08480;old_locus_tag=SOPEG_1589 NZ_CP006568.1 Protein Homology CDS 1664250 1664474 . - 0 ID=cds1683;Parent=gene1711;Dbxref=Genbank:WP_025245013.1;Name=WP_025245013.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245013.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1664965 1666283 . + . ID=id236;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1665040 1666227 . + . ID=gene1712;Name=SOPEG_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08485 NZ_CP006568.1 Protein Homology CDS 1665040 1666227 . + 0 ID=cds1684;Parent=gene1712;Dbxref=Genbank:WP_025245014.1;Name=WP_025245014.1;gbkey=CDS;product=transposase;protein_id=WP_025245014.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1666199 1667242 . + . ID=gene1713;Name=SOPEG_RS08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08490;pseudo=true NZ_CP006568.1 Protein Homology CDS 1666199 1667242 . + 0 ID=cds1685;Parent=gene1713;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:1666247..1666249%2Caa:Other),(pos:1666400..1666402%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1667311 1667398 . - . ID=gene1714;Name=SOPEG_RS08495;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS08495;old_locus_tag=SOPEG_t1592 NZ_CP006568.1 tRNAscan-SE tRNA 1667311 1667398 . - . ID=rna28;Parent=gene1714;anticodon=(pos:complement(1667362..1667364));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 tRNAscan-SE exon 1667311 1667398 . - . ID=id237;Parent=rna28;anticodon=(pos:complement(1667362..1667364));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 RefSeq gene 1667616 1668278 . + . ID=gene1715;Name=SOPEG_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08500;old_locus_tag=SOPEG_1593 NZ_CP006568.1 Protein Homology CDS 1667616 1668278 . + 0 ID=cds1686;Parent=gene1715;Dbxref=Genbank:WP_025245015.1;Name=WP_025245015.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;product=membrane protein;protein_id=WP_025245015.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1668401 1668727 . + . ID=gene1716;Name=SOPEG_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08505;old_locus_tag=SOPEG_1594 NZ_CP006568.1 Protein Homology CDS 1668401 1668727 . + 0 ID=cds1687;Parent=gene1716;Dbxref=Genbank:WP_025245016.1;Name=WP_025245016.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfur transfer protein TusE;protein_id=WP_025245016.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1669038 1669321 . - . ID=gene1717;Name=SOPEG_RS08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08510;pseudo=true NZ_CP006568.1 Protein Homology CDS 1669038 1669321 . - 0 ID=cds1688;Parent=gene1717;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acylphosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1669412 1670602 . + . ID=gene1718;Name=SOPEG_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08515;old_locus_tag=SOPEG_1596 NZ_CP006568.1 Protein Homology CDS 1669412 1670602 . + 0 ID=cds1689;Parent=gene1718;Dbxref=Genbank:WP_025245017.1;Name=WP_025245017.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_025245017.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1670679 1670996 . + . ID=gene1719;Name=SOPEG_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08520;old_locus_tag=SOPEG_1597 NZ_CP006568.1 Protein Homology CDS 1670679 1670996 . + 0 ID=cds1690;Parent=gene1719;Dbxref=Genbank:WP_025245018.1;Name=WP_025245018.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_025245018.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1671281 1671684 . - . ID=gene1720;Name=SOPEG_RS08525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08525;partial=true;pseudo=true;start_range=.,1671281 NZ_CP006568.1 Protein Homology CDS 1671281 1671684 . - 0 ID=cds1691;Parent=gene1720;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1671281;transl_table=11 NZ_CP006568.1 RefSeq gene 1671864 1672130 . + . ID=gene1721;Name=SOPEG_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08530 NZ_CP006568.1 Protein Homology CDS 1671864 1672130 . + 0 ID=cds1692;Parent=gene1721;Dbxref=Genbank:WP_025245019.1;Name=WP_025245019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245019.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1672586 1672986 . + . ID=gene1722;Name=SOPEG_RS08535;end_range=1672986,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08535;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1672586 1672986 . + 0 ID=cds1693;Parent=gene1722;end_range=1672986,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=methylglyoxal synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1672942 1674265 . + . ID=id238;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1672981 1674189 . - . ID=gene1723;Name=SOPEG_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08540;old_locus_tag=SOPEG_1601 NZ_CP006568.1 Protein Homology CDS 1672981 1674189 . - 0 ID=cds1694;Parent=gene1723;Dbxref=Genbank:WP_025245020.1;Name=WP_025245020.1;gbkey=CDS;product=transposase;protein_id=WP_025245020.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1674444 1676498 . - . ID=gene1724;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=SOPEG_RS08545;old_locus_tag=SOPEG_1602 NZ_CP006568.1 Protein Homology CDS 1674444 1676498 . - 0 ID=cds1695;Parent=gene1724;Dbxref=Genbank:WP_025245021.1;Name=WP_025245021.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_025245021.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1676652 1677017 . + . ID=gene1725;Name=SOPEG_RS08550;end_range=1677017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08550;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1676652 1677017 . + 0 ID=cds1696;Parent=gene1725;end_range=1677017,.;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_except=(pos:1676775..1676777%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1677213 1677884 . + . ID=gene1726;Name=SOPEG_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08555 NZ_CP006568.1 Protein Homology CDS 1677213 1677884 . + 0 ID=cds1697;Parent=gene1726;Dbxref=Genbank:WP_025245022.1;Name=WP_025245022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245022.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1677798 1680341 . + . ID=id239;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1677922 1678671 . - . ID=gene1727;Name=SOPEG_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08560;old_locus_tag=SOPEG_1605 NZ_CP006568.1 Protein Homology CDS 1677922 1678671 . - 0 ID=cds1698;Parent=gene1727;Dbxref=Genbank:WP_025245023.1;Name=WP_025245023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245023.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1679021 1680208 . - . ID=gene1728;Name=SOPEG_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08565 NZ_CP006568.1 Protein Homology CDS 1679021 1680208 . - 0 ID=cds1699;Parent=gene1728;Dbxref=Genbank:WP_051419564.1;Name=WP_051419564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419564.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1680471 1681094 . + . ID=gene1729;Name=SOPEG_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22695 NZ_CP006568.1 Protein Homology CDS 1680471 1681094 . + 0 ID=cds1700;Parent=gene1729;Dbxref=Genbank:WP_025245025.1;Name=WP_025245025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245025.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1681135 1681761 . + . ID=gene1730;Name=SOPEG_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22700 NZ_CP006568.1 Protein Homology CDS 1681135 1681761 . + 0 ID=cds1701;Parent=gene1730;Dbxref=Genbank:WP_025245026.1;Name=WP_025245026.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245026.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1681780 1682379 . - . ID=gene1731;Name=SOPEG_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08575 NZ_CP006568.1 Protein Homology CDS 1681780 1682379 . - 0 ID=cds1702;Parent=gene1731;Dbxref=Genbank:WP_025245027.1;Name=WP_025245027.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245027.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1682545 1684276 . + . ID=id240;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1682975 1683721 . - . ID=gene1732;Name=SOPEG_RS08580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08580;pseudo=true NZ_CP006568.1 Protein Homology CDS 1682975 1683721 . - 0 ID=cds1703;Parent=gene1732;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(1683209..1683211)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1683875 1684197 . - . ID=gene1733;Name=SOPEG_RS08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08585;pseudo=true NZ_CP006568.1 Protein Homology CDS 1683875 1684197 . - 0 ID=cds1704;Parent=gene1733;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1684297 1684827 . + . ID=gene1734;Name=SOPEG_RS08590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08590;pseudo=true NZ_CP006568.1 Protein Homology CDS 1684297 1684827 . + 0 ID=cds1705;Parent=gene1734;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1684669..1684671%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1685188 1686250 . + . ID=id241;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1685266 1686188 . + . ID=gene1735;Name=SOPEG_RS08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08595;pseudo=true NZ_CP006568.1 Protein Homology CDS 1685266 1686188 . + 0 ID=cds1706;Parent=gene1735;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1686228 1687309 . + . ID=gene1736;Name=SOPEG_RS08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08600;pseudo=true NZ_CP006568.1 Protein Homology CDS 1686228 1687309 . + 0 ID=cds1707;Parent=gene1736;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1686772..1686774%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1687416 1687988 . - . ID=gene1737;Name=SOPEG_RS08605;end_range=1687988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08605;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1687416 1687988 . - 0 ID=cds1708;Parent=gene1737;end_range=1687988,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1687978 1689299 . + . ID=id242;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1688054 1689262 . + . ID=gene1738;Name=SOPEG_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08610;old_locus_tag=SOPEG_1613 NZ_CP006568.1 Protein Homology CDS 1688054 1689262 . + 0 ID=cds1709;Parent=gene1738;Dbxref=Genbank:WP_025245029.1;Name=WP_025245029.1;gbkey=CDS;product=transposase;protein_id=WP_025245029.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1689592 1690050 . - . ID=gene1739;Name=SOPEG_RS08615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08615;pseudo=true NZ_CP006568.1 Protein Homology CDS 1689592 1690050 . - 0 ID=cds1710;Parent=gene1739;gbkey=CDS;product=Ter macrodomain organizer matS-binding protein;pseudo=true;transl_except=(pos:complement(1690036..1690038)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1690256 1692007 . + . ID=gene1740;Name=SOPEG_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08620;old_locus_tag=SOPEG_1615 NZ_CP006568.1 Protein Homology CDS 1690256 1692007 . + 0 ID=cds1711;Parent=gene1740;Dbxref=Genbank:WP_025245030.1;Name=WP_025245030.1;gbkey=CDS;product=lon protease;protein_id=WP_025245030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1692073 1692591 . + . ID=gene1741;Name=SOPEG_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08625;old_locus_tag=SOPEG_1616 NZ_CP006568.1 Protein Homology CDS 1692073 1692591 . + 0 ID=cds1712;Parent=gene1741;Dbxref=Genbank:WP_025245031.1;Name=WP_025245031.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_025245031.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1693125 1693571 . - . ID=gene1742;Name=SOPEG_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08630 NZ_CP006568.1 Protein Homology CDS 1693125 1693571 . - 0 ID=cds1713;Parent=gene1742;Dbxref=Genbank:WP_025245032.1;Name=WP_025245032.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245032.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1693571 1695212 . - . ID=gene1743;Name=SOPEG_RS08635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08635;pseudo=true NZ_CP006568.1 Protein Homology CDS 1693571 1695212 . - 0 ID=cds1714;Parent=gene1743;exception=annotated by transcript or proteomic data;gbkey=CDS;product=paraquat-inducible protein B;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1695199 1696481 . - . ID=gene1744;Name=SOPEG_RS08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08640;pseudo=true NZ_CP006568.1 Protein Homology CDS 1695199 1696481 . - 0 ID=cds1715;Parent=gene1744;exception=annotated by transcript or proteomic data;gbkey=CDS;product=paraquat-inducible protein A;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1696550 1698472 . - . ID=gene1745;Name=SOPEG_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08645;old_locus_tag=SOPEG_1621 NZ_CP006568.1 Protein Homology CDS 1696550 1698472 . - 0 ID=cds1716;Parent=gene1745;Dbxref=Genbank:WP_025245033.1;Name=WP_025245033.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_025245033.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1698476 1700602 . - . ID=gene1746;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=SOPEG_RS08650;old_locus_tag=SOPEG_1622 NZ_CP006568.1 Protein Homology CDS 1698476 1700602 . - 0 ID=cds1717;Parent=gene1746;Dbxref=Genbank:WP_038468473.1;Name=WP_038468473.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=23S rRNA methyltransferase;protein_id=WP_038468473.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1700706 1701812 . + . ID=gene1747;Name=SOPEG_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08655;old_locus_tag=SOPEG_1623 NZ_CP006568.1 Protein Homology CDS 1700706 1701812 . + 0 ID=cds1718;Parent=gene1747;Dbxref=Genbank:WP_025245034.1;Name=WP_025245034.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1701872 1702420 . - . ID=gene1748;Name=SOPEG_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08660;old_locus_tag=SOPEG_1624 NZ_CP006568.1 Protein Homology CDS 1701872 1702420 . - 0 ID=cds1719;Parent=gene1748;Dbxref=Genbank:WP_025245035.1;Name=WP_025245035.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_025245035.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1702589 1703599 . - . ID=gene1749;Name=SOPEG_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08665;old_locus_tag=SOPEG_1625 NZ_CP006568.1 Protein Homology CDS 1702589 1703599 . - 0 ID=cds1720;Parent=gene1749;Dbxref=Genbank:WP_025245036.1;Name=WP_025245036.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_025245036.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1703878 1706490 . - . ID=gene1750;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SOPEG_RS08670;old_locus_tag=SOPEG_1626 NZ_CP006568.1 Protein Homology CDS 1703878 1706490 . - 0 ID=cds1721;Parent=gene1750;Dbxref=Genbank:WP_025245037.1;Name=WP_025245037.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=WP_025245037.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1706795 1707867 . + . ID=gene1751;Name=SOPEG_RS08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08675;pseudo=true NZ_CP006568.1 Protein Homology CDS 1706795 1707867 . + 0 ID=cds1722;Parent=gene1751;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nicotinate phosphoribosyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1708178 1709578 . + . ID=gene1752;Name=SOPEG_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08680;old_locus_tag=SOPEG_1628 NZ_CP006568.1 Protein Homology CDS 1708178 1709578 . + 0 ID=cds1723;Parent=gene1752;Dbxref=Genbank:WP_025245038.1;Name=WP_025245038.1;gbkey=CDS;product=asparaginyl-tRNA synthetase;protein_id=WP_025245038.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1709717 1710718 . - . ID=gene1753;Name=SOPEG_RS08685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08685;pseudo=true NZ_CP006568.1 Protein Homology CDS 1709717 1710718 . - 0 ID=cds1724;Parent=gene1753;gbkey=CDS;product=integrase;pseudo=true;transl_except=(pos:complement(1710215..1710217)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1710785 1711087 . - . ID=gene1754;Name=SOPEG_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08690;old_locus_tag=SOPEG_1629 NZ_CP006568.1 Protein Homology CDS 1710785 1711087 . - 0 ID=cds1725;Parent=gene1754;Dbxref=Genbank:WP_038468477.1;Name=WP_038468477.1;gbkey=CDS;product=phage repressor protein;protein_id=WP_038468477.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1711134 1711517 . + . ID=gene1755;Name=SOPEG_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08695;old_locus_tag=SOPEG_1630 NZ_CP006568.1 Protein Homology CDS 1711134 1711517 . + 0 ID=cds1726;Parent=gene1755;Dbxref=Genbank:WP_038468480.1;Name=WP_038468480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468480.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1711514 1711693 . + . ID=gene1756;Name=SOPEG_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08700 NZ_CP006568.1 GeneMarkS+ CDS 1711514 1711693 . + 0 ID=cds1727;Parent=gene1756;Dbxref=Genbank:WP_025245039.1;Name=WP_025245039.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245039.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1711954 1713051 . + . ID=gene1757;Name=SOPEG_RS08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08705;pseudo=true NZ_CP006568.1 Protein Homology CDS 1711954 1713051 . + 0 ID=cds1728;Parent=gene1757;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1712182..1712184%2Caa:Other),(pos:1712458..1712460%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1713221 1714411 . + . ID=gene1758;Name=SOPEG_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08710;old_locus_tag=SOPEG_1632 NZ_CP006568.1 Protein Homology CDS 1713221 1714411 . + 0 ID=cds1729;Parent=gene1758;Dbxref=Genbank:WP_025245042.1;Name=WP_025245042.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_025245042.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1714516 1715144 . - . ID=gene1759;Name=SOPEG_RS08715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08715;pseudo=true NZ_CP006568.1 Protein Homology CDS 1714516 1715144 . - 0 ID=cds1730;Parent=gene1759;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-lactamase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1715219 1715768 . - . ID=gene1760;Name=SOPEG_RS08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08720;pseudo=true NZ_CP006568.1 Protein Homology CDS 1715219 1715768 . - 0 ID=cds1731;Parent=gene1760;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1715949 1717691 . - . ID=gene1761;Name=SOPEG_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08725 NZ_CP006568.1 Protein Homology CDS 1715949 1717691 . - 0 ID=cds1732;Parent=gene1761;Dbxref=Genbank:WP_038468482.1;Name=WP_038468482.1;gbkey=CDS;product=peptidase;protein_id=WP_038468482.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1717672 1727131 . + . ID=id243;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1718293 1719277 . + . ID=gene1762;Name=SOPEG_RS08730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08730;pseudo=true NZ_CP006568.1 Protein Homology CDS 1718293 1719277 . + 0 ID=cds1733;Parent=gene1762;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1719331 1719629 . - . ID=gene1763;Name=SOPEG_RS08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08735;pseudo=true NZ_CP006568.1 Protein Homology CDS 1719331 1719629 . - 0 ID=cds1734;Parent=gene1763;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1720016 1720636 . + . ID=gene1764;Name=SOPEG_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08740 NZ_CP006568.1 Protein Homology CDS 1720016 1720636 . + 0 ID=cds1735;Parent=gene1764;Dbxref=Genbank:WP_025245046.1;Name=WP_025245046.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245046.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1720633 1720911 . + . ID=gene1765;Name=SOPEG_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08745;old_locus_tag=SOPEG_1639 NZ_CP006568.1 Protein Homology CDS 1720633 1720911 . + 0 ID=cds1736;Parent=gene1765;Dbxref=Genbank:WP_025245047.1;Name=WP_025245047.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025245047.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1721043 1721315 . + . ID=gene1766;Name=SOPEG_RS22705;end_range=1721315,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22705;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1721043 1721315 . + 0 ID=cds1737;Parent=gene1766;end_range=1721315,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1721466 1721795 . + . ID=gene1767;Name=SOPEG_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22710 NZ_CP006568.1 Protein Homology CDS 1721466 1721795 . + 0 ID=cds1738;Parent=gene1767;Dbxref=Genbank:WP_051419566.1;Name=WP_051419566.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419566.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1721807 1722463 . + . ID=gene1768;Name=SOPEG_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08755;old_locus_tag=SOPEG_1641 NZ_CP006568.1 Protein Homology CDS 1721807 1722463 . + 0 ID=cds1739;Parent=gene1768;Dbxref=Genbank:WP_025245048.1;Name=WP_025245048.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245048.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1722563 1722829 . - . ID=gene1769;Name=SOPEG_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08760 NZ_CP006568.1 GeneMarkS+ CDS 1722563 1722829 . - 0 ID=cds1740;Parent=gene1769;Dbxref=Genbank:WP_025245049.1;Name=WP_025245049.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245049.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1722828 1723079 . + . ID=gene1770;Name=SOPEG_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08765 NZ_CP006568.1 GeneMarkS+ CDS 1722828 1723079 . + 0 ID=cds1741;Parent=gene1770;Dbxref=Genbank:WP_025245050.1;Name=WP_025245050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245050.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1724094 1725017 . - . ID=gene1771;Name=SOPEG_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08770 NZ_CP006568.1 Protein Homology CDS 1724094 1725017 . - 0 ID=cds1742;Parent=gene1771;Dbxref=Genbank:WP_025243904.1;Name=WP_025243904.1;gbkey=CDS;product=transposase;protein_id=WP_025243904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1725249 1725551 . + . ID=gene1772;Name=SOPEG_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08775 NZ_CP006568.1 Protein Homology CDS 1725249 1725551 . + 0 ID=cds1743;Parent=gene1772;Dbxref=Genbank:WP_038468485.1;Name=WP_038468485.1;gbkey=CDS;product=transposase;protein_id=WP_038468485.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1725738 1726820 . + . ID=gene1773;Name=SOPEG_RS08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08780;pseudo=true NZ_CP006568.1 Protein Homology CDS 1725738 1726820 . + 0 ID=cds1744;Parent=gene1773;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1727277 1727711 . - . ID=gene1774;Name=SOPEG_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08785;old_locus_tag=SOPEG_1647 NZ_CP006568.1 Protein Homology CDS 1727277 1727711 . - 0 ID=cds1745;Parent=gene1774;Dbxref=Genbank:WP_025245054.1;Name=WP_025245054.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_025245054.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1727930 1729126 . + . ID=gene1775;Name=SOPEG_RS08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08790;pseudo=true NZ_CP006568.1 Protein Homology CDS 1727930 1729126 . + 0 ID=cds1746;Parent=gene1775;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1729160 1730230 . - . ID=gene1776;Name=SOPEG_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08795;old_locus_tag=SOPEG_1649 NZ_CP006568.1 Protein Homology CDS 1729160 1730230 . - 0 ID=cds1747;Parent=gene1776;Dbxref=Genbank:WP_025245055.1;Name=WP_025245055.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_025245055.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1730276 1731562 . - . ID=gene1777;Name=SOPEG_RS08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08800;pseudo=true NZ_CP006568.1 Protein Homology CDS 1730276 1731562 . - 0 ID=cds1748;Parent=gene1777;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=amino acid dehydrogenase;pseudo=true;transl_except=(pos:complement(1731146..1731148)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1732373 1733906 . + . ID=gene1778;Name=SOPEG_RS08805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08805;pseudo=true NZ_CP006568.1 Protein Homology CDS 1732373 1733906 . + 0 ID=cds1749;Parent=gene1778;exception=annotated by transcript or proteomic data;gbkey=CDS;product=SpoVR family protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1733956 1734684 . - . ID=gene1779;Name=SOPEG_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08810;old_locus_tag=SOPEG_1652 NZ_CP006568.1 Protein Homology CDS 1733956 1734684 . - 0 ID=cds1750;Parent=gene1779;Dbxref=Genbank:WP_025245056.1;Name=WP_025245056.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator;protein_id=WP_025245056.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1735002 1735532 . + . ID=gene1780;Name=SOPEG_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08815;old_locus_tag=SOPEG_1653 NZ_CP006568.1 Protein Homology CDS 1735002 1735532 . + 0 ID=cds1751;Parent=gene1780;Dbxref=Genbank:WP_025245057.1;Name=WP_025245057.1;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_025245057.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1736359 1737417 . + . ID=id244;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1736434 1737357 . + . ID=gene1781;Name=SOPEG_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08820;old_locus_tag=SOPEG_1654 NZ_CP006568.1 Protein Homology CDS 1736434 1737357 . + 0 ID=cds1752;Parent=gene1781;Dbxref=Genbank:WP_025245058.1;Name=WP_025245058.1;gbkey=CDS;product=transposase;protein_id=WP_025245058.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1737594 1738043 . - . ID=gene1782;Name=SOPEG_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08825;old_locus_tag=SOPEG_1655 NZ_CP006568.1 Protein Homology CDS 1737594 1738043 . - 0 ID=cds1753;Parent=gene1782;Dbxref=Genbank:WP_025245059.1;Name=WP_025245059.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245059.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1738160 1738429 . - . ID=gene1783;Name=SOPEG_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08830 NZ_CP006568.1 Protein Homology CDS 1738160 1738429 . - 0 ID=cds1754;Parent=gene1783;Dbxref=Genbank:WP_025245060.1;Name=WP_025245060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245060.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1738379 1742308 . + . ID=id245;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1738590 1740107 . + . ID=gene1784;Name=SOPEG_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08835;old_locus_tag=SOPEG_1657 NZ_CP006568.1 Protein Homology CDS 1738590 1740107 . + 0 ID=cds1755;Parent=gene1784;Dbxref=Genbank:WP_025245061.1;Name=WP_025245061.1;gbkey=CDS;product=transposase;protein_id=WP_025245061.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1740134 1740868 . + . ID=gene1785;Name=SOPEG_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08840;old_locus_tag=SOPEG_1658 NZ_CP006568.1 Protein Homology CDS 1740134 1740868 . + 0 ID=cds1756;Parent=gene1785;Dbxref=Genbank:WP_051420000.1;Name=WP_051420000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420000.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1741061 1742248 . + . ID=gene1786;Name=SOPEG_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08845 NZ_CP006568.1 Protein Homology CDS 1741061 1742248 . + 0 ID=cds1757;Parent=gene1786;Dbxref=Genbank:WP_038468488.1;Name=WP_038468488.1;gbkey=CDS;product=transposase;protein_id=WP_038468488.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1742261 1742746 . - . ID=gene1787;Name=SOPEG_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08850 NZ_CP006568.1 Protein Homology CDS 1742261 1742746 . - 0 ID=cds1758;Parent=gene1787;Dbxref=Genbank:WP_025245063.1;Name=WP_025245063.1;gbkey=CDS;product=isomerase;protein_id=WP_025245063.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1743391 1743672 . - . ID=gene1788;Name=SOPEG_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08855;old_locus_tag=SOPEG_1660 NZ_CP006568.1 Protein Homology CDS 1743391 1743672 . - 0 ID=cds1759;Parent=gene1788;Dbxref=Genbank:WP_025245064.1;Name=WP_025245064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245064.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1743807 1744484 . + . ID=gene1789;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=SOPEG_RS08860;old_locus_tag=SOPEG_1661 NZ_CP006568.1 Protein Homology CDS 1743807 1744484 . + 0 ID=cds1760;Parent=gene1789;Dbxref=Genbank:WP_025245065.1;Name=WP_025245065.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum formation inhibitor;protein_id=WP_025245065.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1744506 1745318 . + . ID=gene1790;Name=SOPEG_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08865;old_locus_tag=SOPEG_1662 NZ_CP006568.1 Protein Homology CDS 1744506 1745318 . + 0 ID=cds1761;Parent=gene1790;Dbxref=Genbank:WP_025245066.1;Name=WP_025245066.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_025245066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1745322 1745591 . + . ID=gene1791;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=SOPEG_RS08870;old_locus_tag=SOPEG_1663 NZ_CP006568.1 Protein Homology CDS 1745322 1745591 . + 0 ID=cds1762;Parent=gene1791;Dbxref=Genbank:WP_025245067.1;Name=WP_025245067.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_025245067.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1745676 1746817 . - . ID=gene1792;Name=SOPEG_RS08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08875;pseudo=true NZ_CP006568.1 Protein Homology CDS 1745676 1746817 . - 0 ID=cds1763;Parent=gene1792;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribonuclease D;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1746855 1747466 . - . ID=gene1793;Name=SOPEG_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08880;old_locus_tag=SOPEG_1665 NZ_CP006568.1 Protein Homology CDS 1746855 1747466 . - 0 ID=cds1764;Parent=gene1793;Dbxref=Genbank:WP_051419568.1;Name=WP_051419568.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419568.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1747529 1748230 . - . ID=gene1794;Name=SOPEG_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08885;old_locus_tag=SOPEG_1666 NZ_CP006568.1 Protein Homology CDS 1747529 1748230 . - 0 ID=cds1765;Parent=gene1794;Dbxref=Genbank:WP_025245068.1;Name=WP_025245068.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_025245068.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1748311 1750214 . - . ID=gene1795;Name=SOPEG_RS08890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08890;pseudo=true NZ_CP006568.1 Protein Homology CDS 1748311 1750214 . - 0 ID=cds1766;Parent=gene1795;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-dependent helicase;pseudo=true;transl_except=(pos:complement(1749987..1749989)%2Caa:Other),(pos:complement(1748800..1748802)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1750320 1750670 . + . ID=gene1796;Name=SOPEG_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08895;old_locus_tag=SOPEG_1668 NZ_CP006568.1 Protein Homology CDS 1750320 1750670 . + 0 ID=cds1767;Parent=gene1796;Dbxref=Genbank:WP_025245071.1;Name=WP_025245071.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_025245071.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1750689 1750926 . - . ID=gene1797;Name=SOPEG_RS08900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08900;pseudo=true NZ_CP006568.1 Protein Homology CDS 1750689 1750926 . - 0 ID=cds1768;Parent=gene1797;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1751078 1752439 . + . ID=gene1798;Name=SOPEG_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08905;old_locus_tag=SOPEG_1670 NZ_CP006568.1 Protein Homology CDS 1751078 1752439 . + 0 ID=cds1769;Parent=gene1798;Dbxref=Genbank:WP_025245072.1;Name=WP_025245072.1;gbkey=CDS;product=aminodeoxychorismate synthase;protein_id=WP_025245072.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1752432 1753025 . + . ID=gene1799;Name=SOPEG_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08910;old_locus_tag=SOPEG_1671 NZ_CP006568.1 Protein Homology CDS 1752432 1753025 . + 0 ID=cds1770;Parent=gene1799;Dbxref=Genbank:WP_025245073.1;Name=WP_025245073.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_025245073.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1753337 1754701 . + . ID=gene1800;Name=SOPEG_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08915;old_locus_tag=SOPEG_1672 NZ_CP006568.1 Protein Homology CDS 1753337 1754701 . + 0 ID=cds1771;Parent=gene1800;Dbxref=Genbank:WP_025245074.1;Name=WP_025245074.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=serine dehydratase;protein_id=WP_025245074.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1754927 1755475 . + . ID=id246;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1754928 1755398 . - . ID=gene1801;Name=SOPEG_RS08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08920;partial=true;pseudo=true;start_range=.,1754928 NZ_CP006568.1 Protein Homology CDS 1754928 1755398 . - 0 ID=cds1772;Parent=gene1801;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1754928;transl_table=11 NZ_CP006568.1 RefSeq gene 1755757 1757313 . - . ID=gene1802;Name=SOPEG_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08925;old_locus_tag=SOPEG_1674 NZ_CP006568.1 Protein Homology CDS 1755757 1757313 . - 0 ID=cds1773;Parent=gene1802;Dbxref=Genbank:WP_025245076.1;Name=WP_025245076.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245076.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1757906 1758669 . + . ID=gene1803;Name=SOPEG_RS08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08930;pseudo=true NZ_CP006568.1 Protein Homology CDS 1757906 1758669 . + 0 ID=cds1774;Parent=gene1803;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS mannose transporter subunit IIAB;pseudo=true;transl_except=(pos:1758325..1758327%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1758602 1759665 . + . ID=id247;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1758662 1759585 . - . ID=gene1804;Name=SOPEG_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08935;old_locus_tag=SOPEG_1676 NZ_CP006568.1 Protein Homology CDS 1758662 1759585 . - 0 ID=cds1775;Parent=gene1804;Dbxref=Genbank:WP_025245077.1;Name=WP_025245077.1;gbkey=CDS;product=transposase;protein_id=WP_025245077.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1759823 1760563 . + . ID=gene1805;Name=SOPEG_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08940 NZ_CP006568.1 Protein Homology CDS 1759823 1760563 . + 0 ID=cds1776;Parent=gene1805;Dbxref=Genbank:WP_051419570.1;Name=WP_051419570.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_051419570.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1760542 1760727 . - . ID=gene1806;Name=SOPEG_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22715 NZ_CP006568.1 GeneMarkS+ CDS 1760542 1760727 . - 0 ID=cds1777;Parent=gene1806;Dbxref=Genbank:WP_051419572.1;Name=WP_051419572.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419572.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1760722 1761344 . + . ID=gene1807;Name=SOPEG_RS08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08945;pseudo=true NZ_CP006568.1 Protein Homology CDS 1760722 1761344 . + 0 ID=cds1778;Parent=gene1807;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS mannose transporter subunit IID;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1761406 1761866 . + . ID=gene1808;Name=SOPEG_RS08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08950;pseudo=true NZ_CP006568.1 Protein Homology CDS 1761406 1761866 . + 0 ID=cds1779;Parent=gene1808;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1762282 1763344 . + . ID=id248;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1762344 1763267 . - . ID=gene1809;Name=SOPEG_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08955;old_locus_tag=SOPEG_1681 NZ_CP006568.1 Protein Homology CDS 1762344 1763267 . - 0 ID=cds1780;Parent=gene1809;Dbxref=Genbank:WP_025245079.1;Name=WP_025245079.1;gbkey=CDS;product=transposase;protein_id=WP_025245079.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1763352 1763882 . + . ID=gene1810;Name=SOPEG_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08960 NZ_CP006568.1 Protein Homology CDS 1763352 1763882 . + 0 ID=cds1781;Parent=gene1810;Dbxref=Genbank:WP_025245080.1;Name=WP_025245080.1;Note=membrane protein YebN;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245080.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1763974 1764789 . - . ID=gene1811;Name=rrmA;gbkey=Gene;gene=rrmA;gene_biotype=pseudogene;locus_tag=SOPEG_RS08965;pseudo=true NZ_CP006568.1 Protein Homology CDS 1763974 1764789 . - 0 ID=cds1782;Parent=gene1811;Note=methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rrmA;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1764901 1765323 . + . ID=gene1812;Name=SOPEG_RS08970;end_range=1765323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08970;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1764901 1765323 . + 0 ID=cds1783;Parent=gene1812;end_range=1765323,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=polyphenol oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1765324 1766648 . + . ID=id249;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1765400 1766323 . + . ID=gene1813;Name=SOPEG_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08975 NZ_CP006568.1 Protein Homology CDS 1765400 1766323 . + 0 ID=cds1784;Parent=gene1813;Dbxref=Genbank:WP_025245084.1;Name=WP_025245084.1;gbkey=CDS;product=transposase;protein_id=WP_025245084.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1766392 1766610 . + . ID=gene1814;Name=SOPEG_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08980 NZ_CP006568.1 Protein Homology CDS 1766392 1766610 . + 0 ID=cds1785;Parent=gene1814;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1766788 1767138 . + . ID=gene1815;Name=SOPEG_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS08985;old_locus_tag=SOPEG_1685 NZ_CP006568.1 Protein Homology CDS 1766788 1767138 . + 0 ID=cds1786;Parent=gene1815;Dbxref=Genbank:WP_025245086.1;Name=WP_025245086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245086.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1767152 1768188 . + . ID=gene1816;Name=SOPEG_RS08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS08990;pseudo=true NZ_CP006568.1 Protein Homology CDS 1767152 1768188 . + 0 ID=cds1787;Parent=gene1816;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1768330 1768521 . + . ID=gene1817;Name=SOPEG_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22720 NZ_CP006568.1 Protein Homology CDS 1768330 1768521 . + 0 ID=cds1788;Parent=gene1817;Dbxref=Genbank:WP_025245087.1;Name=WP_025245087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245087.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1768470 1773177 . + . ID=id250;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1768512 1769159 . - . ID=gene1818;Name=SOPEG_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09000 NZ_CP006568.1 Protein Homology CDS 1768512 1769159 . - 0 ID=cds1789;Parent=gene1818;Dbxref=Genbank:WP_025245088.1;Name=WP_025245088.1;gbkey=CDS;product=transposase;protein_id=WP_025245088.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1769315 1770832 . + . ID=gene1819;Name=SOPEG_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09005;old_locus_tag=SOPEG_1688 NZ_CP006568.1 Protein Homology CDS 1769315 1770832 . + 0 ID=cds1790;Parent=gene1819;Dbxref=Genbank:WP_038468493.1;Name=WP_038468493.1;gbkey=CDS;product=transposase;protein_id=WP_038468493.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1770844 1771593 . + . ID=gene1820;Name=SOPEG_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09010;old_locus_tag=SOPEG_1689 NZ_CP006568.1 Protein Homology CDS 1770844 1771593 . + 0 ID=cds1791;Parent=gene1820;Dbxref=Genbank:WP_025245090.1;Name=WP_025245090.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245090.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1771590 1771775 . - . ID=gene1821;Name=SOPEG_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09015 NZ_CP006568.1 GeneMarkS+ CDS 1771590 1771775 . - 0 ID=cds1792;Parent=gene1821;Dbxref=Genbank:WP_025245091.1;Name=WP_025245091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245091.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1772051 1773101 . - . ID=gene1822;Name=SOPEG_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09020;partial=true;pseudo=true;start_range=.,1772051 NZ_CP006568.1 Protein Homology CDS 1772051 1773101 . - 0 ID=cds1793;Parent=gene1822;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1772051;transl_table=11 NZ_CP006568.1 RefSeq gene 1773652 1774146 . - . ID=gene1823;Name=SOPEG_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22725;old_locus_tag=SOPEG_ps1691 NZ_CP006568.1 Protein Homology CDS 1773652 1774146 . - 0 ID=cds1794;Parent=gene1823;Dbxref=Genbank:WP_051419574.1;Name=WP_051419574.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419574.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1774117 1774220 . + . ID=id251;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1774399 1775046 . + . ID=gene1824;Name=SOPEG_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09030;old_locus_tag=SOPEG_1692 NZ_CP006568.1 Protein Homology CDS 1774399 1775046 . + 0 ID=cds1795;Parent=gene1824;Dbxref=Genbank:WP_025245093.1;Name=WP_025245093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245093.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1775043 1775847 . + . ID=gene1825;Name=SOPEG_RS09035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09035;pseudo=true NZ_CP006568.1 Protein Homology CDS 1775043 1775847 . + 0 ID=cds1796;Parent=gene1825;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1775844 1776499 . + . ID=gene1826;Name=SOPEG_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09040;pseudo=true NZ_CP006568.1 Protein Homology CDS 1775844 1776499 . + 0 ID=cds1797;Parent=gene1826;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1776517 1777398 . + . ID=gene1827;Name=SOPEG_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09045;old_locus_tag=SOPEG_1695 NZ_CP006568.1 Protein Homology CDS 1776517 1777398 . + 0 ID=cds1798;Parent=gene1827;Dbxref=Genbank:WP_025245094.1;Name=WP_025245094.1;gbkey=CDS;product=agmatinase;protein_id=WP_025245094.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1777485 1778288 . + . ID=gene1828;Name=SOPEG_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09050 NZ_CP006568.1 Protein Homology CDS 1777485 1778288 . + 0 ID=cds1799;Parent=gene1828;Dbxref=Genbank:WP_025245095.1;Name=WP_025245095.1;gbkey=CDS;product=amino acid ABC transporter;protein_id=WP_025245095.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1778437 1781042 . + . ID=id252;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1778560 1779309 . - . ID=gene1829;Name=SOPEG_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09055;old_locus_tag=SOPEG_1698 NZ_CP006568.1 Protein Homology CDS 1778560 1779309 . - 0 ID=cds1800;Parent=gene1829;Dbxref=Genbank:WP_025245096.1;Name=WP_025245096.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245096.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1779321 1780838 . - . ID=gene1830;Name=SOPEG_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09060;old_locus_tag=SOPEG_1699 NZ_CP006568.1 Protein Homology CDS 1779321 1780838 . - 0 ID=cds1801;Parent=gene1830;Dbxref=Genbank:WP_038468496.1;Name=WP_038468496.1;gbkey=CDS;product=transposase;protein_id=WP_038468496.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1781040 1781640 . + . ID=gene1831;Name=SOPEG_RS09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09065;pseudo=true NZ_CP006568.1 Protein Homology CDS 1781040 1781640 . + 0 ID=cds1802;Parent=gene1831;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1781615 1782028 . - . ID=gene1832;Name=SOPEG_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22730 NZ_CP006568.1 Protein Homology CDS 1781615 1782028 . - 0 ID=cds1803;Parent=gene1832;Dbxref=Genbank:WP_051419576.1;Name=WP_051419576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419576.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1782004 1782726 . - . ID=gene1833;Name=SOPEG_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22735;old_locus_tag=SOPEG_ps1700 NZ_CP006568.1 Protein Homology CDS 1782004 1782726 . - 0 ID=cds1804;Parent=gene1833;Dbxref=Genbank:WP_051419578.1;Name=WP_051419578.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419578.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1782723 1783940 . - . ID=gene1834;Name=SOPEG_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09075;old_locus_tag=SOPEG_1701 NZ_CP006568.1 Protein Homology CDS 1782723 1783940 . - 0 ID=cds1805;Parent=gene1834;Dbxref=Genbank:WP_025245098.1;Name=WP_025245098.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_025245098.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1783977 1784540 . - . ID=gene1835;Name=SOPEG_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09080;old_locus_tag=SOPEG_1702 NZ_CP006568.1 Protein Homology CDS 1783977 1784540 . - 0 ID=cds1806;Parent=gene1835;Dbxref=Genbank:WP_025245099.1;Name=WP_025245099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245099.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1784626 1784943 . - . ID=gene1836;Name=SOPEG_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09085 NZ_CP006568.1 Protein Homology CDS 1784626 1784943 . - 0 ID=cds1807;Parent=gene1836;Dbxref=Genbank:WP_025245100.1;Name=WP_025245100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245100.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1785177 1785668 . + . ID=gene1837;Name=SOPEG_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09090;old_locus_tag=SOPEG_1704 NZ_CP006568.1 Protein Homology CDS 1785177 1785668 . + 0 ID=cds1808;Parent=gene1837;Dbxref=Genbank:WP_025245101.1;Name=WP_025245101.1;gbkey=CDS;product=methionine-R-sulfoxide reductase;protein_id=WP_025245101.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1785770 1786447 . + . ID=gene1838;Name=SOPEG_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09095;old_locus_tag=SOPEG_1705 NZ_CP006568.1 Protein Homology CDS 1785770 1786447 . + 0 ID=cds1809;Parent=gene1838;Dbxref=Genbank:WP_025245102.1;Name=WP_025245102.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=prop expression regulator;protein_id=WP_025245102.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1786467 1788506 . + . ID=gene1839;Name=SOPEG_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09100;old_locus_tag=SOPEG_1706 NZ_CP006568.1 Protein Homology CDS 1786467 1788506 . + 0 ID=cds1810;Parent=gene1839;Dbxref=Genbank:WP_025245103.1;Name=WP_025245103.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_025245103.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1788697 1789578 . + . ID=gene1840;Name=SOPEG_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09105;old_locus_tag=SOPEG_1707 NZ_CP006568.1 Protein Homology CDS 1788697 1789578 . + 0 ID=cds1811;Parent=gene1840;Dbxref=Genbank:WP_025245104.1;Name=WP_025245104.1;Note=metalloprotease;gbkey=CDS;product=heat-shock protein HtpX;protein_id=WP_025245104.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1789876 1791254 . - . ID=gene1841;Name=SOPEG_RS09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09110;pseudo=true NZ_CP006568.1 Protein Homology CDS 1789876 1791254 . - 0 ID=cds1812;Parent=gene1841;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1791468 1792259 . + . ID=gene1842;Name=SOPEG_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09115;old_locus_tag=SOPEG_1709 NZ_CP006568.1 Protein Homology CDS 1791468 1792259 . + 0 ID=cds1813;Parent=gene1842;Dbxref=Genbank:WP_025245105.1;Name=WP_025245105.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245105.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1792326 1792574 . + . ID=gene1843;Name=SOPEG_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09120;old_locus_tag=SOPEG_1710 NZ_CP006568.1 Protein Homology CDS 1792326 1792574 . + 0 ID=cds1814;Parent=gene1843;Dbxref=Genbank:WP_025245106.1;Name=WP_025245106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245106.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1792740 1792883 . + . ID=gene1844;Name=SOPEG_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09125;old_locus_tag=SOPEG_1711 NZ_CP006568.1 Protein Homology CDS 1792740 1792883 . + 0 ID=cds1815;Parent=gene1844;Dbxref=Genbank:WP_025245107.1;Name=WP_025245107.1;gbkey=CDS;product=PhoP family transcriptional regulator;protein_id=WP_025245107.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1792976 1793245 . + . ID=gene1845;Name=SOPEG_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09130;old_locus_tag=SOPEG_1712 NZ_CP006568.1 Protein Homology CDS 1792976 1793245 . + 0 ID=cds1816;Parent=gene1845;Dbxref=Genbank:WP_025245108.1;Name=WP_025245108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245108.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1793334 1794317 . + . ID=gene1846;Name=SOPEG_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09135;old_locus_tag=SOPEG_1713 NZ_CP006568.1 Protein Homology CDS 1793334 1794317 . + 0 ID=cds1817;Parent=gene1846;Dbxref=Genbank:WP_025245109.1;Name=WP_025245109.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_025245109.1;transl_table=11 NZ_CP006568.1 cmsearch region 1795325 1795768 . + . ID=id253;Note=cspA;gbkey=misc_feature NZ_CP006568.1 RefSeq gene 1795508 1795717 . + . ID=gene1847;Name=SOPEG_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09140;old_locus_tag=SOPEG_1715 NZ_CP006568.1 Protein Homology CDS 1795508 1795717 . + 0 ID=cds1818;Parent=gene1847;Dbxref=Genbank:WP_005968829.1;Name=WP_005968829.1;gbkey=CDS;product=cold-shock protein CspC;protein_id=WP_005968829.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1795818 1797140 . + . ID=id254;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1796002 1797063 . - . ID=gene1848;Name=SOPEG_RS09145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09145;partial=true;pseudo=true;start_range=.,1796002 NZ_CP006568.1 Protein Homology CDS 1796002 1797063 . - 0 ID=cds1819;Parent=gene1848;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1796002;transl_table=11 NZ_CP006568.1 RefSeq gene 1797657 1797845 . - . ID=gene1849;Name=SOPEG_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22740 NZ_CP006568.1 GeneMarkS+ CDS 1797657 1797845 . - 0 ID=cds1820;Parent=gene1849;Dbxref=Genbank:WP_025245111.1;Name=WP_025245111.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245111.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1797871 1798209 . + . ID=gene1850;Name=SOPEG_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22745 NZ_CP006568.1 Protein Homology CDS 1797871 1798209 . + 0 ID=cds1821;Parent=gene1850;Dbxref=Genbank:WP_025245112.1;Name=WP_025245112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245112.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1798238 1799008 . - . ID=gene1851;Name=SOPEG_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09155;old_locus_tag=SOPEG_1718 NZ_CP006568.1 Protein Homology CDS 1798238 1799008 . - 0 ID=cds1822;Parent=gene1851;Dbxref=Genbank:WP_025245113.1;Name=WP_025245113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245113.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1799184 1799900 . + . ID=gene1852;Name=SOPEG_RS09160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09160;pseudo=true NZ_CP006568.1 Protein Homology CDS 1799184 1799900 . + 0 ID=cds1823;Parent=gene1852;gbkey=CDS;product=allophanate hydrolase;pseudo=true;transl_except=(pos:1799469..1799471%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1799900 1800565 . + . ID=gene1853;Name=SOPEG_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09165 NZ_CP006568.1 Protein Homology CDS 1799900 1800565 . + 0 ID=cds1824;Parent=gene1853;Dbxref=Genbank:WP_051419580.1;Name=WP_051419580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419580.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1800550 1800873 . + . ID=gene1854;Name=SOPEG_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22750 NZ_CP006568.1 Protein Homology CDS 1800550 1800873 . + 0 ID=cds1825;Parent=gene1854;Dbxref=Genbank:WP_051419582.1;Name=WP_051419582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419582.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1800916 1801750 . - . ID=gene1855;Name=SOPEG_RS09170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09170;pseudo=true NZ_CP006568.1 Protein Homology CDS 1800916 1801750 . - 0 ID=cds1826;Parent=gene1855;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_except=(pos:complement(1801426..1801428)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1801870 1802295 . + . ID=gene1856;Name=SOPEG_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09175;old_locus_tag=SOPEG_1722 NZ_CP006568.1 Protein Homology CDS 1801870 1802295 . + 0 ID=cds1827;Parent=gene1856;Dbxref=Genbank:WP_025245114.1;Name=WP_025245114.1;gbkey=CDS;product=glyoxalase;protein_id=WP_025245114.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1802516 1802725 . - . ID=gene1857;Name=SOPEG_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09180 NZ_CP006568.1 GeneMarkS+ CDS 1802516 1802725 . - 0 ID=cds1828;Parent=gene1857;Dbxref=Genbank:WP_025245115.1;Name=WP_025245115.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245115.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1803246 1803920 . - . ID=gene1858;Name=SOPEG_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09185;old_locus_tag=SOPEG_1723 NZ_CP006568.1 GeneMarkS+ CDS 1803246 1803920 . - 0 ID=cds1829;Parent=gene1858;Dbxref=Genbank:WP_038468503.1;Name=WP_038468503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468503.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1804060 1805124 . - . ID=gene1859;Name=SOPEG_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09190;old_locus_tag=SOPEG_1724 NZ_CP006568.1 Protein Homology CDS 1804060 1805124 . - 0 ID=cds1830;Parent=gene1859;Dbxref=Genbank:WP_025245117.1;Name=WP_025245117.1;Note=member of a type III secretion system which is part of a pathogenicity island in Salmonella%2C Yersinia and pathogenic Escherichia coli;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_025245117.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1805117 1805876 . - . ID=gene1860;Name=SOPEG_RS09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09195;pseudo=true NZ_CP006568.1 Protein Homology CDS 1805117 1805876 . - 0 ID=cds1831;Parent=gene1860;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type III secretion protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1805873 1806142 . - . ID=gene1861;Name=SOPEG_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09200;old_locus_tag=SOPEG_1726 NZ_CP006568.1 Protein Homology CDS 1805873 1806142 . - 0 ID=cds1832;Parent=gene1861;Dbxref=Genbank:WP_025245118.1;Name=WP_025245118.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_025245118.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1806139 1806786 . - . ID=gene1862;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=SOPEG_RS09205;old_locus_tag=SOPEG_1727 NZ_CP006568.1 Protein Homology CDS 1806139 1806786 . - 0 ID=cds1833;Parent=gene1862;Dbxref=Genbank:WP_025245119.1;Name=WP_025245119.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=type III secretion system protein SsaR;protein_id=WP_025245119.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1806844 1807884 . - . ID=gene1863;Name=SOPEG_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09210;old_locus_tag=SOPEG_1728 NZ_CP006568.1 Protein Homology CDS 1806844 1807884 . - 0 ID=cds1834;Parent=gene1863;Dbxref=Genbank:WP_025245120.1;Name=WP_025245120.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245120.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1807865 1808242 . - . ID=gene1864;Name=SOPEG_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09215;old_locus_tag=SOPEG_1729 NZ_CP006568.1 Protein Homology CDS 1807865 1808242 . - 0 ID=cds1835;Parent=gene1864;Dbxref=Genbank:WP_025245121.1;Name=WP_025245121.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245121.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1808223 1808603 . - . ID=gene1865;Name=SOPEG_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09220;old_locus_tag=SOPEG_1730 NZ_CP006568.1 GeneMarkS+ CDS 1808223 1808603 . - 0 ID=cds1836;Parent=gene1865;Dbxref=Genbank:WP_038468506.1;Name=WP_038468506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468506.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1808597 1809904 . - . ID=gene1866;Name=SOPEG_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09225;old_locus_tag=SOPEG_1731 NZ_CP006568.1 Protein Homology CDS 1808597 1809904 . - 0 ID=cds1837;Parent=gene1866;Dbxref=Genbank:WP_025245123.1;Name=WP_025245123.1;gbkey=CDS;product=type III secretion protein ATPase;protein_id=WP_025245123.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1809912 1811969 . - . ID=gene1867;Name=SOPEG_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09230;old_locus_tag=SOPEG_1732 NZ_CP006568.1 Protein Homology CDS 1809912 1811969 . - 0 ID=cds1838;Parent=gene1867;Dbxref=Genbank:WP_025245124.1;Name=WP_025245124.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_025245124.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1811954 1812322 . - . ID=gene1868;Name=SOPEG_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09235;old_locus_tag=SOPEG_1733 NZ_CP006568.1 Protein Homology CDS 1811954 1812322 . - 0 ID=cds1839;Parent=gene1868;Dbxref=Genbank:WP_025245125.1;Name=WP_025245125.1;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B is involved in the secretion of translocator and effector proteins;gbkey=CDS;product=type III secretion system protein SsaM;protein_id=WP_025245125.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1812385 1813371 . - . ID=gene1869;Name=SOPEG_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09240;old_locus_tag=SOPEG_1734 NZ_CP006568.1 Protein Homology CDS 1812385 1813371 . - 0 ID=cds1840;Parent=gene1869;Dbxref=Genbank:WP_025245126.1;Name=WP_025245126.1;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B may be involved in regulation;gbkey=CDS;product=type III secretion system protein SsaL;protein_id=WP_025245126.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1813265 1814044 . - . ID=gene1870;Name=SOPEG_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09245;old_locus_tag=SOPEG_1735 NZ_CP006568.1 Protein Homology CDS 1813265 1814044 . - 0 ID=cds1841;Parent=gene1870;Dbxref=Genbank:WP_025245127.1;Name=WP_025245127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245127.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1814026 1814589 . - . ID=gene1871;Name=SOPEG_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09250;old_locus_tag=SOPEG_1736 NZ_CP006568.1 Protein Homology CDS 1814026 1814589 . - 0 ID=cds1842;Parent=gene1871;Dbxref=Genbank:WP_025245128.1;Name=WP_025245128.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_025245128.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1814607 1815332 . - . ID=gene1872;Name=SOPEG_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09255;old_locus_tag=SOPEG_1737 NZ_CP006568.1 Protein Homology CDS 1814607 1815332 . - 0 ID=cds1843;Parent=gene1872;Dbxref=Genbank:WP_025245129.1;Name=WP_025245129.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_025245129.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1815329 1815583 . - . ID=gene1873;Name=SOPEG_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09260;old_locus_tag=SOPEG_1738 NZ_CP006568.1 Protein Homology CDS 1815329 1815583 . - 0 ID=cds1844;Parent=gene1873;Dbxref=Genbank:WP_025245130.1;Name=WP_025245130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245130.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1815580 1815849 . - . ID=gene1874;Name=SOPEG_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09265;old_locus_tag=SOPEG_1739 NZ_CP006568.1 Protein Homology CDS 1815580 1815849 . - 0 ID=cds1845;Parent=gene1874;Dbxref=Genbank:WP_025245131.1;Name=WP_025245131.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_025245131.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1815846 1816061 . - . ID=gene1875;Name=SOPEG_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09270;old_locus_tag=SOPEG_1740 NZ_CP006568.1 Protein Homology CDS 1815846 1816061 . - 0 ID=cds1846;Parent=gene1875;Dbxref=Genbank:WP_025245132.1;Name=WP_025245132.1;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell;gbkey=CDS;product=type III secretion system needle protein SsaG;protein_id=WP_025245132.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1816433 1816832 . - . ID=gene1876;Name=SOPEG_RS09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09275;partial=true;pseudo=true;start_range=.,1816433 NZ_CP006568.1 Protein Homology CDS 1816433 1816832 . - 0 ID=cds1847;Parent=gene1876;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B chaperone for SseF%3B required for the efficient replication of Salmonella in host macrophages;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=type III secretion system chaperone protein SscB;pseudo=true;start_range=.,1816433;transl_table=11 NZ_CP006568.1 RefSeq gene 1816926 1817348 . - . ID=gene1877;Name=SOPEG_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09280;old_locus_tag=SOPEG_1742 NZ_CP006568.1 Protein Homology CDS 1816926 1817348 . - 0 ID=cds1848;Parent=gene1877;Dbxref=Genbank:WP_025245135.1;Name=WP_025245135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245135.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1817355 1818050 . - . ID=gene1878;Name=SOPEG_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09285;old_locus_tag=SOPEG_1743 NZ_CP006568.1 Protein Homology CDS 1817355 1818050 . - 0 ID=cds1849;Parent=gene1878;Dbxref=Genbank:WP_025245136.1;Name=WP_025245136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245136.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1818060 1819103 . - . ID=gene1879;Name=SOPEG_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09290;old_locus_tag=SOPEG_1744 NZ_CP006568.1 Protein Homology CDS 1818060 1819103 . - 0 ID=cds1850;Parent=gene1879;Dbxref=Genbank:WP_025245137.1;Name=WP_025245137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245137.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1819105 1819611 . - . ID=gene1880;Name=SOPEG_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09295;old_locus_tag=SOPEG_1745 NZ_CP006568.1 Protein Homology CDS 1819105 1819611 . - 0 ID=cds1851;Parent=gene1880;Dbxref=Genbank:WP_025245138.1;Name=WP_025245138.1;gbkey=CDS;product=pathogenicity island 2 chaperone protein SscA;protein_id=WP_025245138.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1819592 1820173 . - . ID=gene1881;Name=SOPEG_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09300;old_locus_tag=SOPEG_1746 NZ_CP006568.1 Protein Homology CDS 1819592 1820173 . - 0 ID=cds1852;Parent=gene1881;Dbxref=Genbank:WP_025245139.1;Name=WP_025245139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245139.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1820519 1820779 . - . ID=gene1882;Name=SOPEG_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09305;old_locus_tag=SOPEG_1748 NZ_CP006568.1 Protein Homology CDS 1820519 1820779 . - 0 ID=cds1853;Parent=gene1882;Dbxref=Genbank:WP_025245140.1;Name=WP_025245140.1;gbkey=CDS;product=restriction endonuclease Eco57I;protein_id=WP_025245140.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1820792 1821982 . - . ID=gene1883;Name=SOPEG_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09310;old_locus_tag=SOPEG_1749 NZ_CP006568.1 Protein Homology CDS 1820792 1821982 . - 0 ID=cds1854;Parent=gene1883;Dbxref=Genbank:WP_025245141.1;Name=WP_025245141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245141.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1821979 1823457 . - . ID=gene1884;Name=SOPEG_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09315;old_locus_tag=SOPEG_1750 NZ_CP006568.1 Protein Homology CDS 1821979 1823457 . - 0 ID=cds1855;Parent=gene1884;Dbxref=Genbank:WP_025245142.1;Name=WP_025245142.1;gbkey=CDS;product=outer membrane secretin SsaC;protein_id=WP_025245142.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1823441 1823653 . - . ID=gene1885;Name=SOPEG_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22755 NZ_CP006568.1 Protein Homology CDS 1823441 1823653 . - 0 ID=cds1856;Parent=gene1885;Dbxref=Genbank:WP_051419584.1;Name=WP_051419584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419584.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1824057 1826867 . + . ID=gene1886;Name=SOPEG_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09325;old_locus_tag=SOPEG_1752 NZ_CP006568.1 Protein Homology CDS 1824057 1826867 . + 0 ID=cds1857;Parent=gene1886;Dbxref=Genbank:WP_025245144.1;Name=WP_025245144.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=histidine kinase;protein_id=WP_025245144.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1826860 1827495 . + . ID=gene1887;Name=SOPEG_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09330;old_locus_tag=SOPEG_1753 NZ_CP006568.1 Protein Homology CDS 1826860 1827495 . + 0 ID=cds1858;Parent=gene1887;Dbxref=Genbank:WP_025245145.1;Name=WP_025245145.1;Note=is phosphorylated by SsrA%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=histidine kinase;protein_id=WP_025245145.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1827979 1828191 . - . ID=gene1888;Name=SOPEG_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09335 NZ_CP006568.1 GeneMarkS+ CDS 1827979 1828191 . - 0 ID=cds1859;Parent=gene1888;Dbxref=Genbank:WP_025245146.1;Name=WP_025245146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245146.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1828784 1829847 . + . ID=id255;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1828845 1829768 . - . ID=gene1889;Name=SOPEG_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09340;old_locus_tag=SOPEG_1755 NZ_CP006568.1 Protein Homology CDS 1828845 1829768 . - 0 ID=cds1860;Parent=gene1889;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1830251 1830487 . + . ID=gene1890;Name=SOPEG_RS09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09345;pseudo=true NZ_CP006568.1 Protein Homology CDS 1830251 1830487 . + 0 ID=cds1861;Parent=gene1890;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1830275..1830277%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1831061 1832871 . + . ID=id256;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1831123 1832046 . - . ID=gene1891;Name=SOPEG_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09350;old_locus_tag=SOPEG_1757 NZ_CP006568.1 Protein Homology CDS 1831123 1832046 . - 0 ID=cds1862;Parent=gene1891;Dbxref=Genbank:WP_025245147.1;Name=WP_025245147.1;gbkey=CDS;product=transposase;protein_id=WP_025245147.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1832171 1832833 . + . ID=gene1892;Name=SOPEG_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09355 NZ_CP006568.1 Protein Homology CDS 1832171 1832833 . + 0 ID=cds1863;Parent=gene1892;Dbxref=Genbank:WP_025245148.1;Name=WP_025245148.1;gbkey=CDS;product=transposase;protein_id=WP_025245148.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1833498 1834133 . + . ID=gene1893;Name=SOPEG_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09360;old_locus_tag=SOPEG_1759 NZ_CP006568.1 Protein Homology CDS 1833498 1834133 . + 0 ID=cds1864;Parent=gene1893;Dbxref=Genbank:WP_025245149.1;Name=WP_025245149.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_025245149.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1834133 1834411 . + . ID=gene1894;Name=SOPEG_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09365;old_locus_tag=SOPEG_1760 NZ_CP006568.1 Protein Homology CDS 1834133 1834411 . + 0 ID=cds1865;Parent=gene1894;Dbxref=Genbank:WP_025245150.1;Name=WP_025245150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245150.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1834457 1835785 . + . ID=id257;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1834533 1835747 . + . ID=gene1895;Name=SOPEG_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09370;old_locus_tag=SOPEG_1761 NZ_CP006568.1 Protein Homology CDS 1834533 1835747 . + 0 ID=cds1866;Parent=gene1895;Dbxref=Genbank:WP_025245151.1;Name=WP_025245151.1;gbkey=CDS;product=transposase;protein_id=WP_025245151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1836872 1837942 . + . ID=gene1896;Name=SOPEG_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09375;old_locus_tag=SOPEG_1762 NZ_CP006568.1 Protein Homology CDS 1836872 1837942 . + 0 ID=cds1867;Parent=gene1896;Dbxref=Genbank:WP_025245152.1;Name=WP_025245152.1;gbkey=CDS;product=peptidase U61;protein_id=WP_025245152.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1838024 1839273 . - . ID=gene1897;Name=SOPEG_RS09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09380;pseudo=true NZ_CP006568.1 Protein Homology CDS 1838024 1839273 . - 0 ID=cds1868;Parent=gene1897;exception=annotated by transcript or proteomic data;gbkey=CDS;product=2-methylcitrate dehydratase;pseudo=true;transl_except=(pos:complement(1838462..1838464)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1839270 1840112 . - . ID=gene1898;Name=SOPEG_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09385 NZ_CP006568.1 Protein Homology CDS 1839270 1840112 . - 0 ID=cds1869;Parent=gene1898;Dbxref=Genbank:WP_025245153.1;Name=WP_025245153.1;gbkey=CDS;product=serine hydrolase;protein_id=WP_025245153.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1840118 1840882 . - . ID=gene1899;Name=SOPEG_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09390;old_locus_tag=SOPEG_1765 NZ_CP006568.1 Protein Homology CDS 1840118 1840882 . - 0 ID=cds1870;Parent=gene1899;Dbxref=Genbank:WP_025245154.1;Name=WP_025245154.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_025245154.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1840879 1841635 . - . ID=gene1900;Name=SOPEG_RS09395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09395;pseudo=true NZ_CP006568.1 Protein Homology CDS 1840879 1841635 . - 0 ID=cds1871;Parent=gene1900;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1841628 1842534 . - . ID=gene1901;Name=SOPEG_RS09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09400;pseudo=true NZ_CP006568.1 Protein Homology CDS 1841628 1842534 . - 0 ID=cds1872;Parent=gene1901;exception=annotated by transcript or proteomic data;gbkey=CDS;product=D-ala-D-ala transporter subunit;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1842531 1843560 . - . ID=gene1902;Name=SOPEG_RS09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09405;pseudo=true NZ_CP006568.1 Protein Homology CDS 1842531 1843560 . - 0 ID=cds1873;Parent=gene1902;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1843573 1845164 . - . ID=gene1903;Name=SOPEG_RS09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09410;pseudo=true NZ_CP006568.1 Protein Homology CDS 1843573 1845164 . - 0 ID=cds1874;Parent=gene1903;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1845187 1846614 . - . ID=gene1904;Name=SOPEG_RS09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09415;pseudo=true NZ_CP006568.1 Protein Homology CDS 1845187 1846614 . - 0 ID=cds1875;Parent=gene1904;gbkey=CDS;product=amidohydrolase;pseudo=true;transl_except=(pos:complement(1846510..1846512)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1846856 1847624 . - . ID=gene1905;Name=SOPEG_RS09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09420;pseudo=true NZ_CP006568.1 Protein Homology CDS 1846856 1847624 . - 0 ID=cds1876;Parent=gene1905;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1848465 1849890 . + . ID=gene1906;Name=SOPEG_RS09425;end_range=1849890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09425;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1848465 1849890 . + 0 ID=cds1877;Parent=gene1906;end_range=1849890,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=prolyl oligopeptidase;pseudo=true;transl_except=(pos:1848531..1848533%2Caa:Other),(pos:1848567..1848569%2Caa:Other),(pos:1849624..1849626%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1849903 1852513 . + . ID=id258;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1850106 1851458 . + . ID=gene1907;Name=SOPEG_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09430 NZ_CP006568.1 Protein Homology CDS 1850106 1851458 . + 0 ID=cds1878;Parent=gene1907;Dbxref=Genbank:WP_051419586.1;Name=WP_051419586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419586.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1851642 1852391 . + . ID=gene1908;Name=SOPEG_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09435;old_locus_tag=SOPEG_1774 NZ_CP006568.1 Protein Homology CDS 1851642 1852391 . + 0 ID=cds1879;Parent=gene1908;Dbxref=Genbank:WP_025245158.1;Name=WP_025245158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245158.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1852598 1853919 . + . ID=id259;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1852674 1853882 . + . ID=gene1909;Name=SOPEG_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09440;old_locus_tag=SOPEG_1775 NZ_CP006568.1 Protein Homology CDS 1852674 1853882 . + 0 ID=cds1880;Parent=gene1909;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1853957 1854166 . + . ID=gene1910;Name=SOPEG_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09445 NZ_CP006568.1 GeneMarkS+ CDS 1853957 1854166 . + 0 ID=cds1881;Parent=gene1910;Dbxref=Genbank:WP_025245159.1;Name=WP_025245159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245159.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1854479 1854832 . - . ID=gene1911;Name=SOPEG_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09450 NZ_CP006568.1 Protein Homology CDS 1854479 1854832 . - 0 ID=cds1882;Parent=gene1911;Dbxref=Genbank:WP_025245160.1;Name=WP_025245160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1855416 1855796 . + . ID=gene1912;Name=SOPEG_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09455 NZ_CP006568.1 Protein Homology CDS 1855416 1855796 . + 0 ID=cds1883;Parent=gene1912;Dbxref=Genbank:WP_025245161.1;Name=WP_025245161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245161.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1856066 1857856 . + . ID=gene1913;Name=SOPEG_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09460;old_locus_tag=SOPEG_1778 NZ_CP006568.1 Protein Homology CDS 1856066 1857856 . + 0 ID=cds1884;Parent=gene1913;Dbxref=Genbank:WP_025245162.1;Name=WP_025245162.1;gbkey=CDS;product=glycosyl hydrolase family 3;protein_id=WP_025245162.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1857937 1859226 . + . ID=gene1914;Name=SOPEG_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09465;old_locus_tag=SOPEG_1779 NZ_CP006568.1 Protein Homology CDS 1857937 1859226 . + 0 ID=cds1885;Parent=gene1914;Dbxref=Genbank:WP_025245163.1;Name=WP_025245163.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_025245163.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1859327 1860166 . - . ID=gene1915;Name=SOPEG_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09470;old_locus_tag=SOPEG_1780 NZ_CP006568.1 Protein Homology CDS 1859327 1860166 . - 0 ID=cds1886;Parent=gene1915;Dbxref=Genbank:WP_025245164.1;Name=WP_025245164.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245164.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1860169 1861235 . + . ID=id260;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1860232 1861155 . - . ID=gene1916;Name=SOPEG_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09475;old_locus_tag=SOPEG_1781 NZ_CP006568.1 Protein Homology CDS 1860232 1861155 . - 0 ID=cds1887;Parent=gene1916;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1861203 1861801 . - . ID=gene1917;Name=SOPEG_RS09480;end_range=1861801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09480;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1861203 1861801 . - 0 ID=cds1888;Parent=gene1917;end_range=1861801,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1861789 1862391 . + . ID=gene1918;Name=SOPEG_RS09485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09485;partial=true;pseudo=true;start_range=.,1861789 NZ_CP006568.1 Protein Homology CDS 1861789 1862391 . + 0 ID=cds1889;Parent=gene1918;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1861789;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1861796 1862450 . + . ID=id261;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1862384 1862638 . - . ID=gene1919;Name=SOPEG_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09490 NZ_CP006568.1 Protein Homology CDS 1862384 1862638 . - 0 ID=cds1890;Parent=gene1919;Dbxref=Genbank:WP_025245165.1;Name=WP_025245165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245165.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1862784 1863218 . - . ID=gene1920;Name=SOPEG_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09495 NZ_CP006568.1 Protein Homology CDS 1862784 1863218 . - 0 ID=cds1891;Parent=gene1920;Dbxref=Genbank:WP_025245166.1;Name=WP_025245166.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245166.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1863578 1864009 . - . ID=gene1921;Name=SOPEG_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09500 NZ_CP006568.1 Protein Homology CDS 1863578 1864009 . - 0 ID=cds1892;Parent=gene1921;Dbxref=Genbank:WP_025245167.1;Name=WP_025245167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245167.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1863994 1865316 . + . ID=id262;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1864032 1865240 . - . ID=gene1922;Name=SOPEG_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09505;old_locus_tag=SOPEG_1787 NZ_CP006568.1 Protein Homology CDS 1864032 1865240 . - 0 ID=cds1893;Parent=gene1922;Dbxref=Genbank:WP_025245168.1;Name=WP_025245168.1;gbkey=CDS;product=transposase;protein_id=WP_025245168.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1865630 1866073 . + . ID=gene1923;Name=SOPEG_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09510 NZ_CP006568.1 Protein Homology CDS 1865630 1866073 . + 0 ID=cds1894;Parent=gene1923;Dbxref=Genbank:WP_038468512.1;Name=WP_038468512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468512.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1866009 1867068 . + . ID=id263;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1866066 1866518 . - . ID=gene1924;Name=SOPEG_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09515 NZ_CP006568.1 Protein Homology CDS 1866066 1866518 . - 0 ID=cds1895;Parent=gene1924;Dbxref=Genbank:WP_038468515.1;Name=WP_038468515.1;gbkey=CDS;product=transposase;protein_id=WP_038468515.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1866448 1866990 . - . ID=gene1925;Name=SOPEG_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09520 NZ_CP006568.1 Protein Homology CDS 1866448 1866990 . - 0 ID=cds1896;Parent=gene1925;Dbxref=Genbank:WP_025245171.1;Name=WP_025245171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245171.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1867089 1867280 . + . ID=gene1926;Name=SOPEG_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09525 NZ_CP006568.1 GeneMarkS+ CDS 1867089 1867280 . + 0 ID=cds1897;Parent=gene1926;Dbxref=Genbank:WP_025245172.1;Name=WP_025245172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245172.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1867258 1868326 . + . ID=id264;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1867341 1867794 . + . ID=gene1927;Name=SOPEG_RS09530;end_range=1867794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09530;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1867341 1867794 . + 0 ID=cds1898;Parent=gene1927;end_range=1867794,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1867819 1868265 . + . ID=gene1928;Name=SOPEG_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09535 NZ_CP006568.1 Protein Homology CDS 1867819 1868265 . + 0 ID=cds1899;Parent=gene1928;Dbxref=Genbank:WP_038469900.1;Name=WP_038469900.1;gbkey=CDS;product=transposase;protein_id=WP_038469900.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1868328 1869188 . + . ID=gene1929;Name=SOPEG_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09540 NZ_CP006568.1 GeneMarkS+ CDS 1868328 1869188 . + 0 ID=cds1900;Parent=gene1929;Dbxref=Genbank:WP_038468518.1;Name=WP_038468518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468518.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1869286 1870629 . - . ID=gene1930;Name=SOPEG_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09545;old_locus_tag=SOPEG_1792 NZ_CP006568.1 Protein Homology CDS 1869286 1870629 . - 0 ID=cds1901;Parent=gene1930;Dbxref=Genbank:WP_038468521.1;Name=WP_038468521.1;gbkey=CDS;product=gluconate 2-dehydrogenase;protein_id=WP_038468521.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1870663 1871127 . - . ID=gene1931;Name=SOPEG_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09550 NZ_CP006568.1 Protein Homology CDS 1870663 1871127 . - 0 ID=cds1902;Parent=gene1931;Dbxref=Genbank:WP_025245175.1;Name=WP_025245175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245175.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1871204 1872267 . + . ID=id265;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1871286 1872209 . + . ID=gene1932;Name=SOPEG_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09555;old_locus_tag=SOPEG_1794 NZ_CP006568.1 Protein Homology CDS 1871286 1872209 . + 0 ID=cds1903;Parent=gene1932;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1872255 1872608 . - . ID=gene1933;Name=SOPEG_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09560 NZ_CP006568.1 GeneMarkS+ CDS 1872255 1872608 . - 0 ID=cds1904;Parent=gene1933;Dbxref=Genbank:WP_025245176.1;Name=WP_025245176.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245176.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1874812 1875978 . + . ID=id266;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1874850 1875902 . - . ID=gene1934;Name=SOPEG_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09570 NZ_CP006568.1 Protein Homology CDS 1874850 1875902 . - 0 ID=cds1905;Parent=gene1934;Dbxref=Genbank:WP_025245177.1;Name=WP_025245177.1;gbkey=CDS;product=transposase;protein_id=WP_025245177.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1876040 1877103 . + . ID=id267;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1876119 1877042 . + . ID=gene1935;Name=SOPEG_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09575;old_locus_tag=SOPEG_1796 NZ_CP006568.1 Protein Homology CDS 1876119 1877042 . + 0 ID=cds1906;Parent=gene1935;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1877783 1879107 . + . ID=id268;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1877859 1878794 . + . ID=gene1936;Name=SOPEG_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09580 NZ_CP006568.1 Protein Homology CDS 1877859 1878794 . + 0 ID=cds1907;Parent=gene1936;Dbxref=Genbank:WP_038468528.1;Name=WP_038468528.1;gbkey=CDS;product=transposase;protein_id=WP_038468528.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1878810 1879069 . + . ID=gene1937;Name=SOPEG_RS09585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09585;pseudo=true NZ_CP006568.1 Protein Homology CDS 1878810 1879069 . + 0 ID=cds1908;Parent=gene1937;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1879289 1879642 . - . ID=gene1938;Name=SOPEG_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09590;old_locus_tag=SOPEG_1798 NZ_CP006568.1 Protein Homology CDS 1879289 1879642 . - 0 ID=cds1909;Parent=gene1938;Dbxref=Genbank:WP_025245178.1;Name=WP_025245178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245178.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1879682 1880572 . - . ID=gene1939;Name=SOPEG_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09595;old_locus_tag=SOPEG_1799 NZ_CP006568.1 Protein Homology CDS 1879682 1880572 . - 0 ID=cds1910;Parent=gene1939;Dbxref=Genbank:WP_038468531.1;Name=WP_038468531.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468531.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1880573 1880953 . - . ID=gene1940;Name=SOPEG_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09600;old_locus_tag=SOPEG_1800 NZ_CP006568.1 Protein Homology CDS 1880573 1880953 . - 0 ID=cds1911;Parent=gene1940;Dbxref=Genbank:WP_025245180.1;Name=WP_025245180.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245180.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1881209 1881708 . - . ID=gene1941;Name=SOPEG_RS09605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09605;pseudo=true NZ_CP006568.1 Protein Homology CDS 1881209 1881708 . - 0 ID=cds1912;Parent=gene1941;Note=cytoplasmic iron storage protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ferritin;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1882087 1882314 . + . ID=gene1942;Name=SOPEG_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09610;old_locus_tag=SOPEG_1802 NZ_CP006568.1 Protein Homology CDS 1882087 1882314 . + 0 ID=cds1913;Parent=gene1942;Dbxref=Genbank:WP_025245181.1;Name=WP_025245181.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_025245181.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1882887 1883605 . + . ID=gene1943;Name=SOPEG_RS09615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09615;pseudo=true NZ_CP006568.1 Protein Homology CDS 1882887 1883605 . + 0 ID=cds1914;Parent=gene1943;Note=3'-5' exonuclease activity on single or double-strand DNA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=exodeoxyribonuclease X;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1883685 1885702 . - . ID=gene1944;Name=SOPEG_RS09620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09620;partial=true;pseudo=true;start_range=.,1883685 NZ_CP006568.1 Protein Homology CDS 1883685 1885702 . - 0 ID=cds1915;Parent=gene1944;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=protease 2;pseudo=true;start_range=.,1883685;transl_except=(pos:complement(1885203..1885205)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1885803 1886615 . - . ID=gene1945;Name=SOPEG_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22760;old_locus_tag=SOPEG_ps1805 NZ_CP006568.1 Protein Homology CDS 1885803 1886615 . - 0 ID=cds1916;Parent=gene1945;Dbxref=Genbank:WP_025245182.1;Name=WP_025245182.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245182.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1887093 1887879 . + . ID=gene1946;Name=SOPEG_RS09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09630;pseudo=true NZ_CP006568.1 Protein Homology CDS 1887093 1887879 . + 0 ID=cds1917;Parent=gene1946;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1887948 1889120 . - . ID=gene1947;Name=SOPEG_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09635;old_locus_tag=SOPEG_1807 NZ_CP006568.1 Protein Homology CDS 1887948 1889120 . - 0 ID=cds1918;Parent=gene1947;Dbxref=Genbank:WP_051420001.1;Name=WP_051420001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420001.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1889273 1890100 . + . ID=gene1948;Name=SOPEG_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09640;old_locus_tag=SOPEG_1808 NZ_CP006568.1 Protein Homology CDS 1889273 1890100 . + 0 ID=cds1919;Parent=gene1948;Dbxref=Genbank:WP_051419588.1;Name=WP_051419588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_051419588.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1890314 1892954 . + . ID=id269;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1890371 1890661 . - . ID=gene1949;Name=SOPEG_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09645 NZ_CP006568.1 Protein Homology CDS 1890371 1890661 . - 0 ID=cds1920;Parent=gene1949;Dbxref=Genbank:WP_038468534.1;Name=WP_038468534.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468534.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1891198 1892271 . - . ID=gene1950;Name=SOPEG_RS09650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09650;partial=true;pseudo=true;start_range=.,1891198 NZ_CP006568.1 Protein Homology CDS 1891198 1892271 . - 0 ID=cds1921;Parent=gene1950;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1891198;transl_table=11 NZ_CP006568.1 RefSeq gene 1892312 1893034 . - . ID=gene1951;Name=SOPEG_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09655 NZ_CP006568.1 Protein Homology CDS 1892312 1893034 . - 0 ID=cds1922;Parent=gene1951;Dbxref=Genbank:WP_051419590.1;Name=WP_051419590.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419590.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1893081 1893356 . - . ID=gene1952;Name=SOPEG_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09660 NZ_CP006568.1 Protein Homology CDS 1893081 1893356 . - 0 ID=cds1923;Parent=gene1952;Dbxref=Genbank:WP_025245186.1;Name=WP_025245186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245186.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1893346 1893573 . - . ID=gene1953;Name=SOPEG_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09665;old_locus_tag=SOPEG_1813 NZ_CP006568.1 Protein Homology CDS 1893346 1893573 . - 0 ID=cds1924;Parent=gene1953;Dbxref=Genbank:WP_025245187.1;Name=WP_025245187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245187.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1893570 1895195 . - . ID=gene1954;Name=SOPEG_RS09670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09670;pseudo=true NZ_CP006568.1 Protein Homology CDS 1893570 1895195 . - 0 ID=cds1925;Parent=gene1954;gbkey=CDS;product=phage tail protein;pseudo=true;transl_except=(pos:complement(1895049..1895051)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1895199 1895426 . - . ID=gene1955;Name=SOPEG_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09675 NZ_CP006568.1 Protein Homology CDS 1895199 1895426 . - 0 ID=cds1926;Parent=gene1955;Dbxref=Genbank:WP_025245188.1;Name=WP_025245188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245188.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1895437 1895862 . - . ID=gene1956;Name=SOPEG_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09680;old_locus_tag=SOPEG_1816 NZ_CP006568.1 Protein Homology CDS 1895437 1895862 . - 0 ID=cds1927;Parent=gene1956;Dbxref=Genbank:WP_025245189.1;Name=WP_025245189.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245189.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1895958 1896224 . - . ID=gene1957;Name=SOPEG_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09685 NZ_CP006568.1 Protein Homology CDS 1895958 1896224 . - 0 ID=cds1928;Parent=gene1957;Dbxref=Genbank:WP_025245190.1;Name=WP_025245190.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245190.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1896504 1896869 . + . ID=gene1958;Name=SOPEG_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09690;old_locus_tag=SOPEG_1818 NZ_CP006568.1 Protein Homology CDS 1896504 1896869 . + 0 ID=cds1929;Parent=gene1958;Dbxref=Genbank:WP_025245191.1;Name=WP_025245191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245191.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1896881 1896960 . + . ID=gene1959;Name=SOPEG_RS09695;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS09695;old_locus_tag=SOPEG_t1819 NZ_CP006568.1 tRNAscan-SE tRNA 1896881 1896960 . + . ID=rna29;Parent=gene1959;gbkey=tRNA;product=tRNA-OTHER NZ_CP006568.1 tRNAscan-SE exon 1896881 1896960 . + . ID=id270;Parent=rna29;gbkey=tRNA;product=tRNA-OTHER NZ_CP006568.1 RefSeq repeat_region 1896957 1898993 . + . ID=id271;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1897015 1897305 . - . ID=gene1960;Name=SOPEG_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09700 NZ_CP006568.1 Protein Homology CDS 1897015 1897305 . - 0 ID=cds1930;Parent=gene1960;Dbxref=Genbank:WP_038468538.1;Name=WP_038468538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468538.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1897624 1898916 . - . ID=gene1961;Name=SOPEG_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09705 NZ_CP006568.1 Protein Homology CDS 1897624 1898916 . - 0 ID=cds1931;Parent=gene1961;Dbxref=Genbank:WP_038468540.1;Name=WP_038468540.1;gbkey=CDS;product=transposase;protein_id=WP_038468540.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1899350 1899535 . + . ID=gene1962;Name=SOPEG_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09710 NZ_CP006568.1 Protein Homology CDS 1899350 1899535 . + 0 ID=cds1932;Parent=gene1962;Dbxref=Genbank:WP_025245193.1;Name=WP_025245193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245193.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1899510 1900583 . + . ID=id272;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1899577 1900500 . - . ID=gene1963;Name=SOPEG_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09715;old_locus_tag=SOPEG_1822 NZ_CP006568.1 Protein Homology CDS 1899577 1900500 . - 0 ID=cds1933;Parent=gene1963;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1901676 1901903 . + . ID=gene1964;Name=SOPEG_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09720 NZ_CP006568.1 GeneMarkS+ CDS 1901676 1901903 . + 0 ID=cds1934;Parent=gene1964;Dbxref=Genbank:WP_025245195.1;Name=WP_025245195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245195.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1902574 1902659 . - . ID=gene1965;Name=SOPEG_RS09725;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS09725;old_locus_tag=SOPEG_t1825 NZ_CP006568.1 tRNAscan-SE tRNA 1902574 1902659 . - . ID=rna30;Parent=gene1965;anticodon=(pos:complement(1902623..1902625));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 1902574 1902659 . - . ID=id273;Parent=rna30;anticodon=(pos:complement(1902623..1902625));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 1902676 1902749 . - . ID=gene1966;Name=SOPEG_RS09730;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS09730;old_locus_tag=SOPEG_t1826 NZ_CP006568.1 tRNAscan-SE tRNA 1902676 1902749 . - . ID=rna31;Parent=gene1966;anticodon=(pos:complement(1902715..1902717));gbkey=tRNA;product=tRNA-Cys NZ_CP006568.1 tRNAscan-SE exon 1902676 1902749 . - . ID=id274;Parent=rna31;anticodon=(pos:complement(1902715..1902717));gbkey=tRNA;product=tRNA-Cys NZ_CP006568.1 RefSeq repeat_region 1903653 1904977 . + . ID=id275;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1903730 1904020 . + . ID=gene1967;Name=SOPEG_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09735 NZ_CP006568.1 Protein Homology CDS 1903730 1904020 . + 0 ID=cds1935;Parent=gene1967;Dbxref=Genbank:WP_051419592.1;Name=WP_051419592.1;gbkey=CDS;product=transposase;protein_id=WP_051419592.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1904036 1904326 . + . ID=gene1968;Name=SOPEG_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22765 NZ_CP006568.1 Protein Homology CDS 1904036 1904326 . + 0 ID=cds1936;Parent=gene1968;Dbxref=Genbank:WP_051419594.1;Name=WP_051419594.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419594.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1904329 1904739 . + . ID=gene1969;Name=SOPEG_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22770 NZ_CP006568.1 Protein Homology CDS 1904329 1904739 . + 0 ID=cds1937;Parent=gene1969;Dbxref=Genbank:WP_051419596.1;Name=WP_051419596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419596.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1904762 1904941 . + . ID=gene1970;Name=SOPEG_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09740 NZ_CP006568.1 Protein Homology CDS 1904762 1904941 . + 0 ID=cds1938;Parent=gene1970;Dbxref=Genbank:WP_051419597.1;Name=WP_051419597.1;gbkey=CDS;product=transposase;protein_id=WP_051419597.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1904962 1905030 . - . ID=gene1971;Name=SOPEG_RS09745;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS09745 NZ_CP006568.1 tRNAscan-SE tRNA 1904962 1905030 . - . ID=rna32;Parent=gene1971;anticodon=(pos:complement(1904997..1904999));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 tRNAscan-SE exon 1904962 1905030 . - . ID=id276;Parent=rna32;anticodon=(pos:complement(1904997..1904999));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 RefSeq gene 1905175 1905723 . - . ID=gene1972;Name=SOPEG_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09750;old_locus_tag=SOPEG_1829 NZ_CP006568.1 Protein Homology CDS 1905175 1905723 . - 0 ID=cds1939;Parent=gene1972;Dbxref=Genbank:WP_025245196.1;Name=WP_025245196.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_025245196.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1905782 1907614 . - . ID=gene1973;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SOPEG_RS09755;old_locus_tag=SOPEG_1830 NZ_CP006568.1 Protein Homology CDS 1905782 1907614 . - 0 ID=cds1940;Parent=gene1973;Dbxref=Genbank:WP_025245197.1;Name=WP_025245197.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=WP_025245197.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1907607 1908263 . - . ID=gene1974;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=SOPEG_RS09760;old_locus_tag=SOPEG_1831 NZ_CP006568.1 Protein Homology CDS 1907607 1908263 . - 0 ID=cds1941;Parent=gene1974;Dbxref=Genbank:WP_025245198.1;Name=WP_025245198.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_025245198.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1908915 1909139 . + . ID=gene1975;Name=SOPEG_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09765;old_locus_tag=SOPEG_1832 NZ_CP006568.1 Protein Homology CDS 1908915 1909139 . + 0 ID=cds1942;Parent=gene1975;Dbxref=Genbank:WP_025245199.1;Name=WP_025245199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245199.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1909182 1909403 . + . ID=gene1976;Name=SOPEG_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22775 NZ_CP006568.1 Protein Homology CDS 1909182 1909403 . + 0 ID=cds1943;Parent=gene1976;Dbxref=Genbank:WP_051419599.1;Name=WP_051419599.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419599.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1909386 1909629 . + . ID=id277;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1909445 1909585 . - . ID=gene1977;Name=SOPEG_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09775 NZ_CP006568.1 Protein Homology CDS 1909445 1909585 . - 0 ID=cds1944;Parent=gene1977;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1909633 1910183 . + . ID=id278;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1909837 1910238 . + . ID=gene1978;Name=SOPEG_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09780 NZ_CP006568.1 Protein Homology CDS 1909837 1910238 . + 0 ID=cds1945;Parent=gene1978;Dbxref=Genbank:WP_051419601.1;Name=WP_051419601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419601.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1910229 1912586 . + . ID=id279;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1910384 1911307 . - . ID=gene1979;Name=SOPEG_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09785;old_locus_tag=SOPEG_1837 NZ_CP006568.1 Protein Homology CDS 1910384 1911307 . - 0 ID=cds1946;Parent=gene1979;Dbxref=Genbank:WP_025244427.1;Name=WP_025244427.1;gbkey=CDS;product=transposase;protein_id=WP_025244427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1911368 1912510 . - . ID=gene1980;Name=SOPEG_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09790 NZ_CP006568.1 Protein Homology CDS 1911368 1912510 . - 0 ID=cds1947;Parent=gene1980;Dbxref=Genbank:WP_025245202.1;Name=WP_025245202.1;gbkey=CDS;product=transposase;protein_id=WP_025245202.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1912656 1913042 . + . ID=gene1981;Name=SOPEG_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09795;old_locus_tag=SOPEG_1838 NZ_CP006568.1 Protein Homology CDS 1912656 1913042 . + 0 ID=cds1948;Parent=gene1981;Dbxref=Genbank:WP_038468544.1;Name=WP_038468544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468544.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1913175 1913513 . + . ID=gene1982;Name=SOPEG_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09805;old_locus_tag=SOPEG_1839 NZ_CP006568.1 Protein Homology CDS 1913175 1913513 . + 0 ID=cds1949;Parent=gene1982;Dbxref=Genbank:WP_025245204.1;Name=WP_025245204.1;gbkey=CDS;product=holin;protein_id=WP_025245204.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1913727 1914209 . + . ID=gene1983;Name=SOPEG_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09810;old_locus_tag=SOPEG_1840 NZ_CP006568.1 Protein Homology CDS 1913727 1914209 . + 0 ID=cds1950;Parent=gene1983;Dbxref=Genbank:WP_025245205.1;Name=WP_025245205.1;gbkey=CDS;product=terminase;protein_id=WP_025245205.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1914222 1915731 . + . ID=gene1984;Name=SOPEG_RS09815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09815;pseudo=true NZ_CP006568.1 Protein Homology CDS 1914222 1915731 . + 0 ID=cds1951;Parent=gene1984;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1915751 1916997 . + . ID=gene1985;Name=SOPEG_RS09820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09820;pseudo=true NZ_CP006568.1 Protein Homology CDS 1915751 1916997 . + 0 ID=cds1952;Parent=gene1985;exception=annotated by transcript or proteomic data;gbkey=CDS;product=poly(3-hydroxybutyrate) depolymerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1917011 1917676 . + . ID=gene1986;Name=SOPEG_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09825;old_locus_tag=SOPEG_1843 NZ_CP006568.1 Protein Homology CDS 1917011 1917676 . + 0 ID=cds1953;Parent=gene1986;Dbxref=Genbank:WP_025245206.1;Name=WP_025245206.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245206.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1917678 1918881 . + . ID=gene1987;Name=SOPEG_RS09830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09830;pseudo=true NZ_CP006568.1 Protein Homology CDS 1917678 1918881 . + 0 ID=cds1954;Parent=gene1987;exception=annotated by transcript or proteomic data;gbkey=CDS;product=capsid protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1918931 1919242 . + . ID=gene1988;Name=SOPEG_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09835;old_locus_tag=SOPEG_1845 NZ_CP006568.1 Protein Homology CDS 1918931 1919242 . + 0 ID=cds1955;Parent=gene1988;Dbxref=Genbank:WP_038469927.1;Name=WP_038469927.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469927.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1919242 1919589 . + . ID=gene1989;Name=SOPEG_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09840;old_locus_tag=SOPEG_1846 NZ_CP006568.1 Protein Homology CDS 1919242 1919589 . + 0 ID=cds1956;Parent=gene1989;Dbxref=Genbank:WP_025245208.1;Name=WP_025245208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245208.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1919615 1919944 . + . ID=gene1990;Name=SOPEG_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09845;old_locus_tag=SOPEG_1847 NZ_CP006568.1 Protein Homology CDS 1919615 1919944 . + 0 ID=cds1957;Parent=gene1990;Dbxref=Genbank:WP_051419603.1;Name=WP_051419603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419603.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1919941 1920333 . + . ID=gene1991;Name=SOPEG_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09850;old_locus_tag=SOPEG_1848 NZ_CP006568.1 Protein Homology CDS 1919941 1920333 . + 0 ID=cds1958;Parent=gene1991;Dbxref=Genbank:WP_025245210.1;Name=WP_025245210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245210.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1920368 1920874 . + . ID=gene1992;Name=SOPEG_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09855;old_locus_tag=SOPEG_1849 NZ_CP006568.1 Protein Homology CDS 1920368 1920874 . + 0 ID=cds1959;Parent=gene1992;Dbxref=Genbank:WP_025245211.1;Name=WP_025245211.1;gbkey=CDS;product=major tail shaft subunit;protein_id=WP_025245211.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1920871 1921236 . + . ID=gene1993;Name=SOPEG_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09860;old_locus_tag=SOPEG_1850 NZ_CP006568.1 Protein Homology CDS 1920871 1921236 . + 0 ID=cds1960;Parent=gene1993;Dbxref=Genbank:WP_025245212.1;Name=WP_025245212.1;gbkey=CDS;product=phage tail protein;protein_id=WP_025245212.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1921477 1922406 . + . ID=gene1994;Name=SOPEG_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22780 NZ_CP006568.1 Protein Homology CDS 1921477 1922406 . + 0 ID=cds1961;Parent=gene1994;Dbxref=Genbank:WP_051419606.1;Name=WP_051419606.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419606.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1922539 1924308 . + . ID=gene1995;Name=SOPEG_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22785 NZ_CP006568.1 Protein Homology CDS 1922539 1924308 . + 0 ID=cds1962;Parent=gene1995;Dbxref=Genbank:WP_051419608.1;Name=WP_051419608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419608.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1924311 1924646 . + . ID=gene1996;Name=SOPEG_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09870;old_locus_tag=SOPEG_1852 NZ_CP006568.1 Protein Homology CDS 1924311 1924646 . + 0 ID=cds1963;Parent=gene1996;Dbxref=Genbank:WP_025245213.1;Name=WP_025245213.1;gbkey=CDS;product=tail protein;protein_id=WP_025245213.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1925000 1925728 . + . ID=gene1997;Name=SOPEG_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09875 NZ_CP006568.1 Protein Homology CDS 1925000 1925728 . + 0 ID=cds1964;Parent=gene1997;Dbxref=Genbank:WP_025245214.1;Name=WP_025245214.1;gbkey=CDS;product=peptidase P60;protein_id=WP_025245214.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1925712 1926300 . + . ID=gene1998;Name=SOPEG_RS09880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09880;pseudo=true NZ_CP006568.1 Protein Homology CDS 1925712 1926300 . + 0 ID=cds1965;Parent=gene1998;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1926308 1926586 . + . ID=gene1999;Name=SOPEG_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09885 NZ_CP006568.1 Protein Homology CDS 1926308 1926586 . + 0 ID=cds1966;Parent=gene1999;Dbxref=Genbank:WP_025245215.1;Name=WP_025245215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245215.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1926637 1927107 . + . ID=gene2000;Name=SOPEG_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09890 NZ_CP006568.1 GeneMarkS+ CDS 1926637 1927107 . + 0 ID=cds1967;Parent=gene2000;Dbxref=Genbank:WP_025245216.1;Name=WP_025245216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245216.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1926944 1928262 . + . ID=id280;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1927017 1928079 . + . ID=gene2001;Name=SOPEG_RS09895;end_range=1928079,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09895;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1927017 1928079 . + 0 ID=cds1968;Parent=gene2001;end_range=1928079,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1928350 1930653 . + . ID=id281;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1928430 1929353 . + . ID=gene2002;Name=SOPEG_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09900 NZ_CP006568.1 Protein Homology CDS 1928430 1929353 . + 0 ID=cds1969;Parent=gene2002;Dbxref=Genbank:WP_025245217.1;Name=WP_025245217.1;gbkey=CDS;product=transposase;protein_id=WP_025245217.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1929406 1930351 . + . ID=gene2003;Name=SOPEG_RS09905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09905;pseudo=true NZ_CP006568.1 Protein Homology CDS 1929406 1930351 . + 0 ID=cds1970;Parent=gene2003;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1930397 1930615 . + . ID=gene2004;Name=SOPEG_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09910 NZ_CP006568.1 Protein Homology CDS 1930397 1930615 . + 0 ID=cds1971;Parent=gene2004;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1930651 1930887 . - . ID=gene2005;Name=SOPEG_RS09915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09915;partial=true;pseudo=true;start_range=.,1930651 NZ_CP006568.1 Protein Homology CDS 1930651 1930887 . - 0 ID=cds1972;Parent=gene2005;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1930651;transl_table=11 NZ_CP006568.1 RefSeq gene 1930884 1931537 . - . ID=gene2006;Name=SOPEG_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09920;old_locus_tag=SOPEG_1861 NZ_CP006568.1 Protein Homology CDS 1930884 1931537 . - 0 ID=cds1973;Parent=gene2006;Dbxref=Genbank:WP_025245220.1;Name=WP_025245220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245220.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1931078 1934194 . + . ID=id282;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1931941 1932436 . - . ID=gene2007;Name=SOPEG_RS09925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09925;pseudo=true NZ_CP006568.1 Protein Homology CDS 1931941 1932436 . - 0 ID=cds1974;Parent=gene2007;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1932161..1932163)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1932703 1934193 . - . ID=gene2008;Name=SOPEG_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09930 NZ_CP006568.1 Protein Homology CDS 1932703 1934193 . - 0 ID=cds1975;Parent=gene2008;Dbxref=Genbank:WP_025245221.1;Name=WP_025245221.1;gbkey=CDS;product=transposase;protein_id=WP_025245221.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1934199 1935263 . + . ID=id283;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1934260 1935183 . - . ID=gene2009;Name=SOPEG_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09935;old_locus_tag=SOPEG_1864 NZ_CP006568.1 Protein Homology CDS 1934260 1935183 . - 0 ID=cds1976;Parent=gene2009;Dbxref=Genbank:WP_025245222.1;Name=WP_025245222.1;gbkey=CDS;product=transposase;protein_id=WP_025245222.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1935327 1941634 . + . ID=id284;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1935388 1936311 . - . ID=gene2010;Name=SOPEG_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09940;old_locus_tag=SOPEG_1865 NZ_CP006568.1 Protein Homology CDS 1935388 1936311 . - 0 ID=cds1977;Parent=gene2010;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1936938 1937189 . - . ID=gene2011;Name=SOPEG_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09945;old_locus_tag=SOPEG_1867 NZ_CP006568.1 GeneMarkS+ CDS 1936938 1937189 . - 0 ID=cds1978;Parent=gene2011;Dbxref=Genbank:WP_025245050.1;Name=WP_025245050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245050.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1937188 1937454 . + . ID=gene2012;Name=SOPEG_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09950 NZ_CP006568.1 GeneMarkS+ CDS 1937188 1937454 . + 0 ID=cds1979;Parent=gene2012;Dbxref=Genbank:WP_025245223.1;Name=WP_025245223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245223.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1937554 1938210 . - . ID=gene2013;Name=SOPEG_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09955;old_locus_tag=SOPEG_1868 NZ_CP006568.1 Protein Homology CDS 1937554 1938210 . - 0 ID=cds1980;Parent=gene2013;Dbxref=Genbank:WP_025245224.1;Name=WP_025245224.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245224.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1938222 1938974 . - . ID=gene2014;Name=SOPEG_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09960;old_locus_tag=SOPEG_1869 NZ_CP006568.1 Protein Homology CDS 1938222 1938974 . - 0 ID=cds1981;Parent=gene2014;Dbxref=Genbank:WP_025245225.1;Name=WP_025245225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245225.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1939100 1939384 . - . ID=gene2015;Name=SOPEG_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09965;old_locus_tag=SOPEG_1870 NZ_CP006568.1 Protein Homology CDS 1939100 1939384 . - 0 ID=cds1982;Parent=gene2015;Dbxref=Genbank:WP_025245226.1;Name=WP_025245226.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025245226.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1939937 1940287 . + . ID=gene2016;Name=SOPEG_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09970;old_locus_tag=SOPEG_1871 NZ_CP006568.1 Protein Homology CDS 1939937 1940287 . + 0 ID=cds1983;Parent=gene2016;Dbxref=Genbank:WP_025245227.1;Name=WP_025245227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245227.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1940655 1941552 . - . ID=gene2017;Name=SOPEG_RS09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS09975;partial=true;pseudo=true;start_range=.,1940655 NZ_CP006568.1 Protein Homology CDS 1940655 1941552 . - 0 ID=cds1984;Parent=gene2017;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,1940655;transl_table=11 NZ_CP006568.1 RefSeq gene 1941629 1941865 . - . ID=gene2018;Name=SOPEG_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09980;old_locus_tag=SOPEG_1873 NZ_CP006568.1 GeneMarkS+ CDS 1941629 1941865 . - 0 ID=cds1985;Parent=gene2018;Dbxref=Genbank:WP_025245228.1;Name=WP_025245228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245228.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1941862 1942077 . - . ID=gene2019;Name=SOPEG_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09985 NZ_CP006568.1 Protein Homology CDS 1941862 1942077 . - 0 ID=cds1986;Parent=gene2019;Dbxref=Genbank:WP_025245229.1;Name=WP_025245229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245229.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1942077 1942280 . - . ID=gene2020;Name=SOPEG_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09990;old_locus_tag=SOPEG_1875 NZ_CP006568.1 Protein Homology CDS 1942077 1942280 . - 0 ID=cds1987;Parent=gene2020;Dbxref=Genbank:WP_025245230.1;Name=WP_025245230.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245230.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1942480 1943584 . + . ID=id285;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1942559 1943482 . + . ID=gene2021;Name=SOPEG_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS09995;old_locus_tag=SOPEG_1876 NZ_CP006568.1 Protein Homology CDS 1942559 1943482 . + 0 ID=cds1988;Parent=gene2021;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1943691 1944071 . - . ID=gene2022;Name=SOPEG_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22790;old_locus_tag=SOPEG_1877 NZ_CP006568.1 Protein Homology CDS 1943691 1944071 . - 0 ID=cds1989;Parent=gene2022;Dbxref=Genbank:WP_025245231.1;Name=WP_025245231.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245231.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1944358 1945065 . - . ID=gene2023;Name=SOPEG_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10005;old_locus_tag=SOPEG_1878 NZ_CP006568.1 Protein Homology CDS 1944358 1945065 . - 0 ID=cds1990;Parent=gene2023;Dbxref=Genbank:WP_025245232.1;Name=WP_025245232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245232.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1945928 1946263 . - . ID=gene2024;Name=SOPEG_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22795 NZ_CP006568.1 GeneMarkS+ CDS 1945928 1946263 . - 0 ID=cds1991;Parent=gene2024;Dbxref=Genbank:WP_025245234.1;Name=WP_025245234.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245234.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1946280 1948947 . + . ID=id286;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1946317 1947183 . - . ID=gene2025;Name=SOPEG_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22800;old_locus_tag=SOPEG_ps1880 NZ_CP006568.1 Protein Homology CDS 1946317 1947183 . - 0 ID=cds1992;Parent=gene2025;Dbxref=Genbank:WP_051419610.1;Name=WP_051419610.1;gbkey=CDS;product=transposase;protein_id=WP_051419610.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1947180 1947524 . - . ID=gene2026;Name=SOPEG_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10020 NZ_CP006568.1 Protein Homology CDS 1947180 1947524 . - 0 ID=cds1993;Parent=gene2026;Dbxref=Genbank:WP_051419612.1;Name=WP_051419612.1;gbkey=CDS;product=transposase;protein_id=WP_051419612.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1947889 1948389 . + . ID=gene2027;Name=SOPEG_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10025 NZ_CP006568.1 Protein Homology CDS 1947889 1948389 . + 0 ID=cds1994;Parent=gene2027;Dbxref=Genbank:WP_025245235.1;Name=WP_025245235.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245235.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1948672 1948812 . + . ID=gene2028;Name=SOPEG_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10030 NZ_CP006568.1 Protein Homology CDS 1948672 1948812 . + 0 ID=cds1995;Parent=gene2028;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1948963 1957556 . + . ID=id287;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1949039 1950247 . + . ID=gene2029;Name=SOPEG_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10035;old_locus_tag=SOPEG_1882 NZ_CP006568.1 Protein Homology CDS 1949039 1950247 . + 0 ID=cds1996;Parent=gene2029;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1950328 1951077 . - . ID=gene2030;Name=SOPEG_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10040;old_locus_tag=SOPEG_1883 NZ_CP006568.1 Protein Homology CDS 1950328 1951077 . - 0 ID=cds1997;Parent=gene2030;Dbxref=Genbank:WP_025245236.1;Name=WP_025245236.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245236.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1951089 1952607 . - . ID=gene2031;Name=SOPEG_RS22805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22805;old_locus_tag=SOPEG_ps1884;pseudo=true NZ_CP006568.1 Protein Homology CDS 1951089 1952607 . - 0 ID=cds1998;Parent=gene2031;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(1951620..1951622)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1953068 1953598 . - . ID=gene2032;Name=SOPEG_RS10050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10050;partial=true;pseudo=true;start_range=.,1953068 NZ_CP006568.1 Protein Homology CDS 1953068 1953598 . - 0 ID=cds1999;Parent=gene2032;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=helicase;pseudo=true;start_range=.,1953068;transl_table=11 NZ_CP006568.1 RefSeq gene 1953788 1954711 . + . ID=gene2033;Name=SOPEG_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10055;old_locus_tag=SOPEG_1886 NZ_CP006568.1 Protein Homology CDS 1953788 1954711 . + 0 ID=cds2000;Parent=gene2033;Dbxref=Genbank:WP_025245239.1;Name=WP_025245239.1;gbkey=CDS;product=transposase;protein_id=WP_025245239.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1954848 1955066 . - . ID=gene2034;Name=SOPEG_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10060 NZ_CP006568.1 Protein Homology CDS 1954848 1955066 . - 0 ID=cds2001;Parent=gene2034;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1955214 1955354 . - . ID=gene2035;Name=SOPEG_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10065 NZ_CP006568.1 Protein Homology CDS 1955214 1955354 . - 0 ID=cds2002;Parent=gene2035;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1955362 1956138 . - . ID=gene2036;Name=SOPEG_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10070 NZ_CP006568.1 Protein Homology CDS 1955362 1956138 . - 0 ID=cds2003;Parent=gene2036;Dbxref=Genbank:WP_025245240.1;Name=WP_025245240.1;gbkey=CDS;product=transposase;protein_id=WP_025245240.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1956310 1957518 . + . ID=gene2037;Name=SOPEG_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10075;old_locus_tag=SOPEG_1889 NZ_CP006568.1 Protein Homology CDS 1956310 1957518 . + 0 ID=cds2004;Parent=gene2037;Dbxref=Genbank:WP_025245241.1;Name=WP_025245241.1;gbkey=CDS;product=transposase;protein_id=WP_025245241.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1957567 1957902 . - . ID=gene2038;Name=SOPEG_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10080 NZ_CP006568.1 GeneMarkS+ CDS 1957567 1957902 . - 0 ID=cds2005;Parent=gene2038;Dbxref=Genbank:WP_038468555.1;Name=WP_038468555.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468555.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1958304 1958495 . - . ID=gene2039;Name=SOPEG_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10085 NZ_CP006568.1 GeneMarkS+ CDS 1958304 1958495 . - 0 ID=cds2006;Parent=gene2039;Dbxref=Genbank:WP_025245243.1;Name=WP_025245243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245243.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1958800 1959718 . - . ID=gene2040;Name=SOPEG_RS10090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10090;pseudo=true NZ_CP006568.1 Protein Homology CDS 1958800 1959718 . - 0 ID=cds2007;Parent=gene2040;Note=Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nitrogen assimilation transcriptional regulator;pseudo=true;transl_except=(pos:complement(1959632..1959634)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1960171 1966139 . + . ID=id288;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1960388 1961596 . + . ID=gene2041;Name=SOPEG_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10095;old_locus_tag=SOPEG_1892 NZ_CP006568.1 Protein Homology CDS 1960388 1961596 . + 0 ID=cds2008;Parent=gene2041;Dbxref=Genbank:WP_025245244.1;Name=WP_025245244.1;gbkey=CDS;product=transposase;protein_id=WP_025245244.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1961695 1962444 . - . ID=gene2042;Name=SOPEG_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10100;old_locus_tag=SOPEG_1893 NZ_CP006568.1 Protein Homology CDS 1961695 1962444 . - 0 ID=cds2009;Parent=gene2042;Dbxref=Genbank:WP_025245236.1;Name=WP_025245236.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245236.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1962574 1963713 . - . ID=gene2043;Name=SOPEG_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10105 NZ_CP006568.1 Protein Homology CDS 1962574 1963713 . - 0 ID=cds2010;Parent=gene2043;Dbxref=Genbank:WP_038468558.1;Name=WP_038468558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468558.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1964436 1964966 . - . ID=gene2044;Name=SOPEG_RS10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10110;partial=true;pseudo=true;start_range=.,1964436 NZ_CP006568.1 Protein Homology CDS 1964436 1964966 . - 0 ID=cds2011;Parent=gene2044;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=helicase;pseudo=true;start_range=.,1964436;transl_table=11 NZ_CP006568.1 RefSeq gene 1965507 1966077 . + . ID=gene2045;Name=SOPEG_RS22810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22810;pseudo=true NZ_CP006568.1 Protein Homology CDS 1965507 1966077 . + 0 ID=cds2012;Parent=gene2045;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1966209 1966403 . + . ID=gene2046;Name=SOPEG_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10120 NZ_CP006568.1 Protein Homology CDS 1966209 1966403 . + 0 ID=cds2013;Parent=gene2046;Dbxref=Genbank:WP_025245245.1;Name=WP_025245245.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245245.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1966461 1966550 . - . ID=gene2047;Name=SOPEG_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS10125;old_locus_tag=SOPEG_t1897 NZ_CP006568.1 tRNAscan-SE tRNA 1966461 1966550 . - . ID=rna33;Parent=gene2047;anticodon=(pos:complement(1966514..1966516));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 tRNAscan-SE exon 1966461 1966550 . - . ID=id289;Parent=rna33;anticodon=(pos:complement(1966514..1966516));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 RefSeq repeat_region 1966743 1967808 . + . ID=id290;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1966805 1967728 . - . ID=gene2048;Name=SOPEG_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10130;old_locus_tag=SOPEG_1899 NZ_CP006568.1 Protein Homology CDS 1966805 1967728 . - 0 ID=cds2014;Parent=gene2048;Dbxref=Genbank:WP_025245246.1;Name=WP_025245246.1;gbkey=CDS;product=transposase;protein_id=WP_025245246.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1967755 1968516 . + . ID=gene2049;Name=SOPEG_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10135 NZ_CP006568.1 Protein Homology CDS 1967755 1968516 . + 0 ID=cds2015;Parent=gene2049;Dbxref=Genbank:WP_025245247.1;Name=WP_025245247.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=DgsA anti-repressor MtfA;protein_id=WP_025245247.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1968691 1968767 . + . ID=gene2050;Name=SOPEG_RS10140;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS10140;old_locus_tag=SOPEG_t1900 NZ_CP006568.1 tRNAscan-SE tRNA 1968691 1968767 . + . ID=rna34;Parent=gene2050;anticodon=(pos:1968725..1968727);gbkey=tRNA;product=tRNA-Asn NZ_CP006568.1 tRNAscan-SE exon 1968691 1968767 . + . ID=id291;Parent=rna34;anticodon=(pos:1968725..1968727);gbkey=tRNA;product=tRNA-Asn NZ_CP006568.1 RefSeq repeat_region 1969055 1970379 . + . ID=id292;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1969091 1970298 . - . ID=gene2051;Name=SOPEG_RS10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10145;pseudo=true NZ_CP006568.1 Protein Homology CDS 1969091 1970298 . - 0 ID=cds2016;Parent=gene2051;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1970390 1971079 . + . ID=gene2052;Name=SOPEG_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10150;partial=true;pseudo=true;start_range=.,1970390 NZ_CP006568.1 Protein Homology CDS 1970390 1971079 . + 0 ID=cds2017;Parent=gene2052;Note=possibly involved in transport of pyrroloquinoline quinone transport;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=pyrroloquinoline quinone biosynthesis protein PqqB;pseudo=true;start_range=.,1970390;transl_table=11 NZ_CP006568.1 RefSeq gene 1971089 1971849 . + . ID=gene2053;Name=SOPEG_RS10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10155;pseudo=true NZ_CP006568.1 Protein Homology CDS 1971089 1971849 . + 0 ID=cds2018;Parent=gene2053;Note=Required in the synthesis of PPQ%2C but its exact function is unknown;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyrroloquinoline quinone biosynthesis protein PqqC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1971846 1972127 . + . ID=gene2054;Name=SOPEG_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10160;old_locus_tag=SOPEG_1904 NZ_CP006568.1 Protein Homology CDS 1971846 1972127 . + 0 ID=cds2019;Parent=gene2054;Dbxref=Genbank:WP_038468565.1;Name=WP_038468565.1;Note=with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone;gbkey=CDS;product=pyrroloquinoline quinone biosynthesis protein PqqD;protein_id=WP_038468565.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1972096 1973253 . + . ID=gene2055;Name=SOPEG_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10165;old_locus_tag=SOPEG_1905 NZ_CP006568.1 Protein Homology CDS 1972096 1973253 . + 0 ID=cds2020;Parent=gene2055;Dbxref=Genbank:WP_025245250.1;Name=WP_025245250.1;gbkey=CDS;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_025245250.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1973637 1974317 . + . ID=gene2056;Name=SOPEG_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10170 NZ_CP006568.1 Protein Homology CDS 1973637 1974317 . + 0 ID=cds2021;Parent=gene2056;Dbxref=Genbank:WP_038468568.1;Name=WP_038468568.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468568.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1974468 1975088 . + . ID=gene2057;Name=SOPEG_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10175 NZ_CP006568.1 Protein Homology CDS 1974468 1975088 . + 0 ID=cds2022;Parent=gene2057;Dbxref=Genbank:WP_025245252.1;Name=WP_025245252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245252.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1975894 1976133 . + . ID=gene2058;Name=SOPEG_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10180;old_locus_tag=SOPEG_1907 NZ_CP006568.1 Protein Homology CDS 1975894 1976133 . + 0 ID=cds2023;Parent=gene2058;Dbxref=Genbank:WP_051419614.1;Name=WP_051419614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419614.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1976259 1976840 . + . ID=gene2059;Name=SOPEG_RS10185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10185;pseudo=true NZ_CP006568.1 Protein Homology CDS 1976259 1976840 . + 0 ID=cds2024;Parent=gene2059;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1976352..1976354%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1977010 1978373 . - . ID=gene2060;Name=SOPEG_RS10190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10190;pseudo=true NZ_CP006568.1 Protein Homology CDS 1977010 1978373 . - 0 ID=cds2025;Parent=gene2060;exception=annotated by transcript or proteomic data;gbkey=CDS;product=4-aminobutyrate aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1978639 1979420 . + . ID=gene2061;Name=SOPEG_RS10195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10195;pseudo=true NZ_CP006568.1 Protein Homology CDS 1978639 1979420 . + 0 ID=cds2026;Parent=gene2061;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alkaline phosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1979502 1980056 . + . ID=gene2062;Name=SOPEG_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10200;old_locus_tag=SOPEG_1911 NZ_CP006568.1 Protein Homology CDS 1979502 1980056 . + 0 ID=cds2027;Parent=gene2062;Dbxref=Genbank:WP_038469949.1;Name=WP_038469949.1;gbkey=CDS;product=flavin reductase;protein_id=WP_038469949.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1980140 1980700 . - . ID=gene2063;Name=SOPEG_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10205 NZ_CP006568.1 Protein Homology CDS 1980140 1980700 . - 0 ID=cds2028;Parent=gene2063;Dbxref=Genbank:WP_025245255.1;Name=WP_025245255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245255.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1980658 1983182 . + . ID=id293;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1981139 1982374 . + . ID=gene2064;Name=SOPEG_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10210 NZ_CP006568.1 Protein Homology CDS 1981139 1982374 . + 0 ID=cds2029;Parent=gene2064;Dbxref=Genbank:WP_051420002.1;Name=WP_051420002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420002.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1982386 1983135 . + . ID=gene2065;Name=SOPEG_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10215;old_locus_tag=SOPEG_1914 NZ_CP006568.1 Protein Homology CDS 1982386 1983135 . + 0 ID=cds2030;Parent=gene2065;Dbxref=Genbank:WP_025245257.1;Name=WP_025245257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245257.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1983312 1984633 . + . ID=id294;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1983388 1984436 . + . ID=gene2066;Name=SOPEG_RS10220;end_range=1984436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10220;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 1983388 1984436 . + 0 ID=cds2031;Parent=gene2066;end_range=1984436,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 1984377 1984595 . + . ID=gene2067;Name=SOPEG_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10225 NZ_CP006568.1 Protein Homology CDS 1984377 1984595 . + 0 ID=cds2032;Parent=gene2067;Dbxref=Genbank:WP_025245259.1;Name=WP_025245259.1;gbkey=CDS;product=transposase;protein_id=WP_025245259.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1984631 1985005 . - . ID=gene2068;Name=SOPEG_RS10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10230;partial=true;pseudo=true;start_range=.,1984631 NZ_CP006568.1 Protein Homology CDS 1984631 1985005 . - 0 ID=cds2033;Parent=gene2068;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1984631;transl_table=11 NZ_CP006568.1 RefSeq gene 1985250 1986521 . + . ID=gene2069;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=SOPEG_RS10235;old_locus_tag=SOPEG_1916 NZ_CP006568.1 Protein Homology CDS 1985250 1986521 . + 0 ID=cds2034;Parent=gene2069;Dbxref=Genbank:WP_051419615.1;Name=WP_051419615.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_051419615.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1986638 1987243 . + . ID=gene2070;Name=SOPEG_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22815 NZ_CP006568.1 Protein Homology CDS 1986638 1987243 . + 0 ID=cds2035;Parent=gene2070;Dbxref=Genbank:WP_025245262.1;Name=WP_025245262.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245262.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1987248 1987715 . + . ID=gene2071;Name=SOPEG_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22820 NZ_CP006568.1 Protein Homology CDS 1987248 1987715 . + 0 ID=cds2036;Parent=gene2071;Dbxref=Genbank:WP_025245263.1;Name=WP_025245263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245263.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1987699 1987962 . + . ID=gene2072;Name=SOPEG_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22825 NZ_CP006568.1 GeneMarkS+ CDS 1987699 1987962 . + 0 ID=cds2037;Parent=gene2072;Dbxref=Genbank:WP_025245264.1;Name=WP_025245264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245264.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1987944 1988129 . - . ID=gene2073;Name=SOPEG_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22830 NZ_CP006568.1 GeneMarkS+ CDS 1987944 1988129 . - 0 ID=cds2038;Parent=gene2073;Dbxref=Genbank:WP_025245265.1;Name=WP_025245265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245265.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1988201 1988428 . + . ID=gene2074;Name=SOPEG_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22835 NZ_CP006568.1 GeneMarkS+ CDS 1988201 1988428 . + 0 ID=cds2039;Parent=gene2074;Dbxref=Genbank:WP_025245266.1;Name=WP_025245266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245266.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1988812 1990107 . + . ID=gene2075;Name=SOPEG_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10245;old_locus_tag=SOPEG_1918 NZ_CP006568.1 Protein Homology CDS 1988812 1990107 . + 0 ID=cds2040;Parent=gene2075;Dbxref=Genbank:WP_025245267.1;Name=WP_025245267.1;gbkey=CDS;product=guanine permease;protein_id=WP_025245267.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1990076 1990399 . + . ID=gene2076;Name=SOPEG_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10250 NZ_CP006568.1 GeneMarkS+ CDS 1990076 1990399 . + 0 ID=cds2041;Parent=gene2076;Dbxref=Genbank:WP_038468572.1;Name=WP_038468572.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468572.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1990380 1991021 . - . ID=gene2077;Name=SOPEG_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10255;old_locus_tag=SOPEG_1919 NZ_CP006568.1 Protein Homology CDS 1990380 1991021 . - 0 ID=cds2042;Parent=gene2077;Dbxref=Genbank:WP_025245268.1;Name=WP_025245268.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_025245268.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1991173 1992123 . + . ID=gene2078;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=pseudogene;locus_tag=SOPEG_RS10260;pseudo=true NZ_CP006568.1 Protein Homology CDS 1991173 1992123 . + 0 ID=cds2043;Parent=gene2078;Note=Converts (S)-lactate and NAD(+) to pyruvate and NADH;gbkey=CDS;gene=ldh;product=lactate dehydrogenase;pseudo=true;transl_except=(pos:1991725..1991727%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1993144 1993488 . - . ID=gene2079;Name=SOPEG_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10265;old_locus_tag=SOPEG_1921 NZ_CP006568.1 Protein Homology CDS 1993144 1993488 . - 0 ID=cds2044;Parent=gene2079;Dbxref=Genbank:WP_025245269.1;Name=WP_025245269.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245269.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 1993721 1997633 . + . ID=id295;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 1993839 1994588 . - . ID=gene2080;Name=SOPEG_RS10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10270;pseudo=true NZ_CP006568.1 Protein Homology CDS 1993839 1994588 . - 0 ID=cds2045;Parent=gene2080;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1994334..1994336)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 1994600 1995742 . - . ID=gene2081;Name=SOPEG_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10275 NZ_CP006568.1 Protein Homology CDS 1994600 1995742 . - 0 ID=cds2046;Parent=gene2081;Dbxref=Genbank:WP_038468576.1;Name=WP_038468576.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468576.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1995782 1996150 . - . ID=gene2082;Name=SOPEG_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10280 NZ_CP006568.1 Protein Homology CDS 1995782 1996150 . - 0 ID=cds2047;Parent=gene2082;Dbxref=Genbank:WP_051419617.1;Name=WP_051419617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419617.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1996386 1997573 . + . ID=gene2083;Name=SOPEG_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10285 NZ_CP006568.1 Protein Homology CDS 1996386 1997573 . + 0 ID=cds2048;Parent=gene2083;Dbxref=Genbank:WP_051419624.1;Name=WP_051419624.1;gbkey=CDS;product=transposase;protein_id=WP_051419624.1;transl_table=11 NZ_CP006568.1 RefSeq gene 1998958 2000265 . - . ID=gene2084;Name=SOPEG_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10290 NZ_CP006568.1 GeneMarkS+ CDS 1998958 2000265 . - 0 ID=cds2049;Parent=gene2084;Dbxref=Genbank:WP_038468582.1;Name=WP_038468582.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468582.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2000459 2000716 . - . ID=gene2085;Name=SOPEG_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10295 NZ_CP006568.1 GeneMarkS+ CDS 2000459 2000716 . - 0 ID=cds2050;Parent=gene2085;Dbxref=Genbank:WP_025245272.1;Name=WP_025245272.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245272.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2000719 2001168 . - . ID=gene2086;Name=SOPEG_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10300;old_locus_tag=SOPEG_1927 NZ_CP006568.1 GeneMarkS+ CDS 2000719 2001168 . - 0 ID=cds2051;Parent=gene2086;Dbxref=Genbank:WP_025245273.1;Name=WP_025245273.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245273.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2001838 2002902 . + . ID=id296;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2001898 2002824 . - . ID=gene2087;Name=SOPEG_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10305;old_locus_tag=SOPEG_1928 NZ_CP006568.1 Protein Homology CDS 2001898 2002824 . - 0 ID=cds2052;Parent=gene2087;Dbxref=Genbank:WP_025245274.1;Name=WP_025245274.1;gbkey=CDS;product=transposase;protein_id=WP_025245274.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2003109 2004173 . + . ID=id297;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2003169 2004092 . - . ID=gene2088;Name=SOPEG_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10310;old_locus_tag=SOPEG_1929 NZ_CP006568.1 Protein Homology CDS 2003169 2004092 . - 0 ID=cds2053;Parent=gene2088;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2004576 2005997 . + . ID=gene2089;Name=SOPEG_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10315;old_locus_tag=SOPEG_1930 NZ_CP006568.1 Protein Homology CDS 2004576 2005997 . + 0 ID=cds2054;Parent=gene2089;Dbxref=Genbank:WP_025245275.1;Name=WP_025245275.1;gbkey=CDS;product=exonuclease I;protein_id=WP_025245275.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2006019 2007396 . - . ID=gene2090;Name=SOPEG_RS10320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10320;pseudo=true NZ_CP006568.1 Protein Homology CDS 2006019 2007396 . - 0 ID=cds2055;Parent=gene2090;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Putrescine importer PuuP;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2007569 2008939 . - . ID=gene2091;Name=SOPEG_RS10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10325;pseudo=true NZ_CP006568.1 Protein Homology CDS 2007569 2008939 . - 0 ID=cds2056;Parent=gene2091;gbkey=CDS;product=gamma-glutamylputrescine synthetase;pseudo=true;transl_except=(pos:complement(2008190..2008192)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2009155 2010472 . + . ID=id298;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2009283 2010279 . - . ID=gene2092;Name=SOPEG_RS22840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22840;old_locus_tag=SOPEG_ps1933;pseudo=true NZ_CP006568.1 Protein Homology CDS 2009283 2010279 . - 0 ID=cds2057;Parent=gene2092;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2010477 2010664 . + . ID=id299;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2010879 2011673 . + . ID=gene2093;Name=SOPEG_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10340;old_locus_tag=SOPEG_1934 NZ_CP006568.1 Protein Homology CDS 2010879 2011673 . + 0 ID=cds2058;Parent=gene2093;Dbxref=Genbank:WP_025245276.1;Name=WP_025245276.1;gbkey=CDS;product=antirepressor;protein_id=WP_025245276.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2011584 2011689 . + . ID=id300;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2011775 2012232 . + . ID=gene2094;Name=SOPEG_RS10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10345;pseudo=true NZ_CP006568.1 Protein Homology CDS 2011775 2012232 . + 0 ID=cds2059;Parent=gene2094;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2012445 2014598 . + . ID=id301;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2012521 2013581 . + . ID=gene2095;Name=SOPEG_RS10350;end_range=2013581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10350;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2012521 2013581 . + 0 ID=cds2060;Parent=gene2095;end_range=2013581,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2013510 2013728 . + . ID=gene2096;Name=SOPEG_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10355 NZ_CP006568.1 Protein Homology CDS 2013510 2013728 . + 0 ID=cds2061;Parent=gene2096;Dbxref=Genbank:WP_025245278.1;Name=WP_025245278.1;gbkey=CDS;product=transposase;protein_id=WP_025245278.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2013809 2014525 . - . ID=gene2097;Name=SOPEG_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10360 NZ_CP006568.1 Protein Homology CDS 2013809 2014525 . - 0 ID=cds2062;Parent=gene2097;Dbxref=Genbank:WP_025245279.1;Name=WP_025245279.1;gbkey=CDS;product=transposase;protein_id=WP_025245279.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2014709 2014951 . - . ID=gene2098;Name=SOPEG_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10365 NZ_CP006568.1 GeneMarkS+ CDS 2014709 2014951 . - 0 ID=cds2063;Parent=gene2098;Dbxref=Genbank:WP_025245280.1;Name=WP_025245280.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245280.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2015023 2015961 . + . ID=gene2099;Name=SOPEG_RS10370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10370;pseudo=true NZ_CP006568.1 Protein Homology CDS 2015023 2015961 . + 0 ID=cds2064;Parent=gene2099;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2017017 2018077 . + . ID=id302;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2017077 2018000 . - . ID=gene2100;Name=SOPEG_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10375;old_locus_tag=SOPEG_1940 NZ_CP006568.1 Protein Homology CDS 2017077 2018000 . - 0 ID=cds2065;Parent=gene2100;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2019387 2020094 . - . ID=gene2101;Name=SOPEG_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10380 NZ_CP006568.1 Protein Homology CDS 2019387 2020094 . - 0 ID=cds2066;Parent=gene2101;Dbxref=Genbank:WP_038468588.1;Name=WP_038468588.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468588.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2020679 2022003 . + . ID=id303;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2020717 2021196 . - . ID=gene2102;Name=SOPEG_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10385 NZ_CP006568.1 Protein Homology CDS 2020717 2021196 . - 0 ID=cds2067;Parent=gene2102;Dbxref=Genbank:WP_025245282.1;Name=WP_025245282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245282.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2021530 2021926 . - . ID=gene2103;Name=SOPEG_RS10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10390;partial=true;pseudo=true;start_range=.,2021530 NZ_CP006568.1 Protein Homology CDS 2021530 2021926 . - 0 ID=cds2068;Parent=gene2103;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2021530;transl_table=11 NZ_CP006568.1 RefSeq gene 2022026 2022399 . - . ID=gene2104;Name=SOPEG_RS10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10395;pseudo=true NZ_CP006568.1 Protein Homology CDS 2022026 2022399 . - 0 ID=cds2069;Parent=gene2104;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2022464 2022658 . + . ID=gene2105;Name=SOPEG_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10400 NZ_CP006568.1 GeneMarkS+ CDS 2022464 2022658 . + 0 ID=cds2070;Parent=gene2105;Dbxref=Genbank:WP_025245283.1;Name=WP_025245283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245283.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2022689 2023297 . + . ID=gene2106;Name=SOPEG_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10405 NZ_CP006568.1 Protein Homology CDS 2022689 2023297 . + 0 ID=cds2071;Parent=gene2106;Dbxref=Genbank:WP_038468591.1;Name=WP_038468591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468591.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2023443 2023643 . + . ID=gene2107;Name=SOPEG_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22845 NZ_CP006568.1 Protein Homology CDS 2023443 2023643 . + 0 ID=cds2072;Parent=gene2107;Dbxref=Genbank:WP_051419626.1;Name=WP_051419626.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419626.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2023929 2026488 . + . ID=id304;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2024086 2025603 . + . ID=gene2108;Name=SOPEG_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10415;old_locus_tag=SOPEG_1945 NZ_CP006568.1 Protein Homology CDS 2024086 2025603 . + 0 ID=cds2073;Parent=gene2108;Dbxref=Genbank:WP_038468594.1;Name=WP_038468594.1;gbkey=CDS;product=transposase;protein_id=WP_038468594.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2025615 2026364 . + . ID=gene2109;Name=SOPEG_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10420;old_locus_tag=SOPEG_1946 NZ_CP006568.1 Protein Homology CDS 2025615 2026364 . + 0 ID=cds2074;Parent=gene2109;Dbxref=Genbank:WP_025245285.1;Name=WP_025245285.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245285.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2026498 2027821 . + . ID=id305;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2026536 2027744 . - . ID=gene2110;Name=SOPEG_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10425;old_locus_tag=SOPEG_1947 NZ_CP006568.1 Protein Homology CDS 2026536 2027744 . - 0 ID=cds2075;Parent=gene2110;Dbxref=Genbank:WP_025245286.1;Name=WP_025245286.1;gbkey=CDS;product=transposase;protein_id=WP_025245286.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2028479 2029797 . + . ID=id306;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2028555 2029763 . + . ID=gene2111;Name=SOPEG_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10430;old_locus_tag=SOPEG_1949 NZ_CP006568.1 Protein Homology CDS 2028555 2029763 . + 0 ID=cds2076;Parent=gene2111;Dbxref=Genbank:WP_025245287.1;Name=WP_025245287.1;gbkey=CDS;product=transposase;protein_id=WP_025245287.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2029813 2030876 . + . ID=id307;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2029875 2030798 . - . ID=gene2112;Name=SOPEG_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10435 NZ_CP006568.1 Protein Homology CDS 2029875 2030798 . - 0 ID=cds2077;Parent=gene2112;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2031019 2031372 . + . ID=gene2113;Name=SOPEG_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10440 NZ_CP006568.1 GeneMarkS+ CDS 2031019 2031372 . + 0 ID=cds2078;Parent=gene2113;Dbxref=Genbank:WP_038468597.1;Name=WP_038468597.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468597.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2031985 2033400 . + . ID=gene2114;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=SOPEG_RS10445;old_locus_tag=SOPEG_1952 NZ_CP006568.1 Protein Homology CDS 2031985 2033400 . + 0 ID=cds2079;Parent=gene2114;Dbxref=Genbank:WP_025245289.1;Name=WP_025245289.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_025245289.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2033549 2033761 . - . ID=gene2115;Name=SOPEG_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10450 NZ_CP006568.1 GeneMarkS+ CDS 2033549 2033761 . - 0 ID=cds2080;Parent=gene2115;Dbxref=Genbank:WP_025245290.1;Name=WP_025245290.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245290.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2033760 2035136 . + . ID=gene2116;Name=SOPEG_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10455;old_locus_tag=SOPEG_1953 NZ_CP006568.1 Protein Homology CDS 2033760 2035136 . + 0 ID=cds2081;Parent=gene2116;Dbxref=Genbank:WP_025245291.1;Name=WP_025245291.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_025245291.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2035136 2035936 . + . ID=gene2117;Name=SOPEG_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10460;old_locus_tag=SOPEG_1954 NZ_CP006568.1 Protein Homology CDS 2035136 2035936 . + 0 ID=cds2082;Parent=gene2117;Dbxref=Genbank:WP_025245292.1;Name=WP_025245292.1;gbkey=CDS;product=ABC transporter;protein_id=WP_025245292.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2035936 2037219 . + . ID=gene2118;Name=SOPEG_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10465;old_locus_tag=SOPEG_1955 NZ_CP006568.1 Protein Homology CDS 2035936 2037219 . + 0 ID=cds2083;Parent=gene2118;Dbxref=Genbank:WP_025245293.1;Name=WP_025245293.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_025245293.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2037238 2039199 . + . ID=gene2119;Name=SOPEG_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10470 NZ_CP006568.1 Protein Homology CDS 2037238 2039199 . + 0 ID=cds2084;Parent=gene2119;Dbxref=Genbank:WP_025245294.1;Name=WP_025245294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245294.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2039212 2041188 . + . ID=gene2120;Name=SOPEG_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10475 NZ_CP006568.1 Protein Homology CDS 2039212 2041188 . + 0 ID=cds2085;Parent=gene2120;Dbxref=Genbank:WP_025245295.1;Name=WP_025245295.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245295.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2041285 2042421 . + . ID=gene2121;Name=SOPEG_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10480;old_locus_tag=SOPEG_1958 NZ_CP006568.1 Protein Homology CDS 2041285 2042421 . + 0 ID=cds2086;Parent=gene2121;Dbxref=Genbank:WP_025245296.1;Name=WP_025245296.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_025245296.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2042430 2043545 . + . ID=gene2122;Name=SOPEG_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10485;old_locus_tag=SOPEG_1959 NZ_CP006568.1 Protein Homology CDS 2042430 2043545 . + 0 ID=cds2087;Parent=gene2122;Dbxref=Genbank:WP_025245297.1;Name=WP_025245297.1;gbkey=CDS;product=glycosyl transferase family 1;protein_id=WP_025245297.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2043667 2045073 . + . ID=gene2123;Name=SOPEG_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10490;old_locus_tag=SOPEG_1960 NZ_CP006568.1 Protein Homology CDS 2043667 2045073 . + 0 ID=cds2088;Parent=gene2123;Dbxref=Genbank:WP_025245298.1;Name=WP_025245298.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_025245298.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2045471 2045713 . - . ID=gene2124;Name=SOPEG_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22850 NZ_CP006568.1 GeneMarkS+ CDS 2045471 2045713 . - 0 ID=cds2089;Parent=gene2124;Dbxref=Genbank:WP_025245299.1;Name=WP_025245299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245299.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2046131 2050829 . + . ID=id308;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2046239 2046997 . - . ID=gene2125;Name=SOPEG_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10495;old_locus_tag=SOPEG_1961 NZ_CP006568.1 Protein Homology CDS 2046239 2046997 . - 0 ID=cds2090;Parent=gene2125;Dbxref=Genbank:WP_038468601.1;Name=WP_038468601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468601.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2047525 2048304 . + . ID=gene2126;Name=SOPEG_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10500 NZ_CP006568.1 Protein Homology CDS 2047525 2048304 . + 0 ID=cds2091;Parent=gene2126;Dbxref=Genbank:WP_025245301.1;Name=WP_025245301.1;gbkey=CDS;product=transposase;protein_id=WP_025245301.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2048522 2049946 . + . ID=gene2127;Name=SOPEG_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10505 NZ_CP006568.1 Protein Homology CDS 2048522 2049946 . + 0 ID=cds2092;Parent=gene2127;Dbxref=Genbank:WP_051419628.1;Name=WP_051419628.1;gbkey=CDS;product=transposase;protein_id=WP_051419628.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2049958 2050707 . + . ID=gene2128;Name=SOPEG_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10510;old_locus_tag=SOPEG_1964 NZ_CP006568.1 Protein Homology CDS 2049958 2050707 . + 0 ID=cds2093;Parent=gene2128;Dbxref=Genbank:WP_025245302.1;Name=WP_025245302.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245302.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2050853 2052175 . + . ID=id309;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2051049 2052099 . - . ID=gene2129;Name=SOPEG_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10515;partial=true;pseudo=true;start_range=.,2051049 NZ_CP006568.1 Protein Homology CDS 2051049 2052099 . - 0 ID=cds2094;Parent=gene2129;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2051049;transl_table=11 NZ_CP006568.1 RefSeq gene 2052084 2052892 . - . ID=gene2130;Name=SOPEG_RS10520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10520;partial=true;pseudo=true;start_range=.,2052084 NZ_CP006568.1 Protein Homology CDS 2052084 2052892 . - 0 ID=cds2095;Parent=gene2130;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=RpiR family transcriptional regulator;pseudo=true;start_range=.,2052084;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2052926 2053992 . + . ID=id310;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2053009 2053932 . + . ID=gene2131;Name=SOPEG_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10525;old_locus_tag=SOPEG_1967 NZ_CP006568.1 Protein Homology CDS 2053009 2053932 . + 0 ID=cds2096;Parent=gene2131;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2053976 2054653 . + . ID=gene2132;Name=SOPEG_RS10530;end_range=2054653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10530;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2053976 2054653 . + 0 ID=cds2097;Parent=gene2132;end_range=2054653,.;gbkey=CDS;partial=true;product=PTS glucose transporter subunit IIB;pseudo=true;transl_except=(pos:2054276..2054278%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2054651 2055715 . + . ID=id311;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2054710 2055633 . - . ID=gene2133;Name=SOPEG_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10535;old_locus_tag=SOPEG_1969 NZ_CP006568.1 Protein Homology CDS 2054710 2055633 . - 0 ID=cds2098;Parent=gene2133;Dbxref=Genbank:WP_025245305.1;Name=WP_025245305.1;gbkey=CDS;product=transposase;protein_id=WP_025245305.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2055694 2056581 . + . ID=gene2134;Name=SOPEG_RS10540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10540;partial=true;pseudo=true;start_range=.,2055694 NZ_CP006568.1 Protein Homology CDS 2055694 2056581 . + 0 ID=cds2099;Parent=gene2134;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=PTS glucose transporter subunit IIB;pseudo=true;start_range=.,2055694;transl_table=11 NZ_CP006568.1 RefSeq gene 2056578 2057300 . + . ID=gene2135;Name=SOPEG_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10545;old_locus_tag=SOPEG_1970 NZ_CP006568.1 Protein Homology CDS 2056578 2057300 . + 0 ID=cds2100;Parent=gene2135;Dbxref=Genbank:WP_025245307.1;Name=WP_025245307.1;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_025245307.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2057464 2057808 . - . ID=gene2136;Name=SOPEG_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10550;old_locus_tag=SOPEG_1971 NZ_CP006568.1 Protein Homology CDS 2057464 2057808 . - 0 ID=cds2101;Parent=gene2136;Dbxref=Genbank:WP_038468605.1;Name=WP_038468605.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_038468605.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2057881 2059236 . - . ID=gene2137;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=SOPEG_RS10555;old_locus_tag=SOPEG_1972 NZ_CP006568.1 Protein Homology CDS 2057881 2059236 . - 0 ID=cds2102;Parent=gene2137;Dbxref=Genbank:WP_025245309.1;Name=WP_025245309.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_025245309.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2059359 2061996 . - . ID=gene2138;Name=SOPEG_RS10560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10560;pseudo=true NZ_CP006568.1 Protein Homology CDS 2059359 2061996 . - 0 ID=cds2103;Parent=gene2138;Note=catalyzes the acetylation of lysine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protein acetyltransferase;pseudo=true;transl_except=(pos:complement(2060524..2060526)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2062184 2062867 . - . ID=gene2139;Name=SOPEG_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10565;old_locus_tag=SOPEG_1974 NZ_CP006568.1 Protein Homology CDS 2062184 2062867 . - 0 ID=cds2104;Parent=gene2139;Dbxref=Genbank:WP_025245310.1;Name=WP_025245310.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245310.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2063239 2063674 . - . ID=gene2140;Name=SOPEG_RS10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10570;pseudo=true NZ_CP006568.1 Protein Homology CDS 2063239 2063674 . - 0 ID=cds2105;Parent=gene2140;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2063894 2064985 . + . ID=gene2141;Name=SOPEG_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10575;old_locus_tag=SOPEG_1976 NZ_CP006568.1 Protein Homology CDS 2063894 2064985 . + 0 ID=cds2106;Parent=gene2141;Dbxref=Genbank:WP_025245311.1;Name=WP_025245311.1;gbkey=CDS;product=methyltransferase;protein_id=WP_025245311.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2065055 2065576 . - . ID=gene2142;Name=SOPEG_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10580;old_locus_tag=SOPEG_1977 NZ_CP006568.1 Protein Homology CDS 2065055 2065576 . - 0 ID=cds2107;Parent=gene2142;Dbxref=Genbank:WP_025245312.1;Name=WP_025245312.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245312.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2065862 2066564 . - . ID=gene2143;Name=SOPEG_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10585;partial=true;pseudo=true;start_range=.,2065862 NZ_CP006568.1 Protein Homology CDS 2065862 2066564 . - 0 ID=cds2108;Parent=gene2143;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2065862;transl_table=11 NZ_CP006568.1 RefSeq gene 2066679 2067878 . - . ID=gene2144;Name=SOPEG_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10590;old_locus_tag=SOPEG_1979 NZ_CP006568.1 Protein Homology CDS 2066679 2067878 . - 0 ID=cds2109;Parent=gene2144;Dbxref=Genbank:WP_025245313.1;Name=WP_025245313.1;gbkey=CDS;product=transporter;protein_id=WP_025245313.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2068020 2069012 . - . ID=gene2145;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=SOPEG_RS10595;old_locus_tag=SOPEG_1980 NZ_CP006568.1 Protein Homology CDS 2068020 2069012 . - 0 ID=cds2110;Parent=gene2145;Dbxref=Genbank:WP_025245314.1;Name=WP_025245314.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_025245314.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2069072 2070057 . - . ID=gene2146;Name=proX;gbkey=Gene;gene=proX;gene_biotype=pseudogene;locus_tag=SOPEG_RS10600;pseudo=true NZ_CP006568.1 Protein Homology CDS 2069072 2070057 . - 0 ID=cds2111;Parent=gene2146;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2070129 2071205 . - . ID=gene2147;Name=SOPEG_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10605;old_locus_tag=SOPEG_1982 NZ_CP006568.1 Protein Homology CDS 2070129 2071205 . - 0 ID=cds2112;Parent=gene2147;Dbxref=Genbank:WP_025245315.1;Name=WP_025245315.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_025245315.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2071198 2072398 . - . ID=gene2148;Name=SOPEG_RS10610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10610;pseudo=true NZ_CP006568.1 Protein Homology CDS 2071198 2072398 . - 0 ID=cds2113;Parent=gene2148;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2072913 2073980 . + . ID=id312;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2072996 2073919 . + . ID=gene2149;Name=SOPEG_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10615;old_locus_tag=SOPEG_1984 NZ_CP006568.1 Protein Homology CDS 2072996 2073919 . + 0 ID=cds2114;Parent=gene2149;Dbxref=Genbank:WP_025245316.1;Name=WP_025245316.1;gbkey=CDS;product=transposase;protein_id=WP_025245316.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2074126 2075091 . - . ID=gene2150;Name=SOPEG_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10620;old_locus_tag=SOPEG_1985 NZ_CP006568.1 Protein Homology CDS 2074126 2075091 . - 0 ID=cds2115;Parent=gene2150;Dbxref=Genbank:WP_025245317.1;Name=WP_025245317.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_025245317.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2075108 2077193 . - . ID=gene2151;Name=SOPEG_RS10625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10625;pseudo=true NZ_CP006568.1 Protein Homology CDS 2075108 2077193 . - 0 ID=cds2116;Parent=gene2151;Note=Catalyzes the rate-limiting step in dNTP synthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;pseudo=true;transl_except=(pos:complement(2076752..2076754)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2077259 2077645 . - . ID=gene2152;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SOPEG_RS10630;old_locus_tag=SOPEG_1987 NZ_CP006568.1 Protein Homology CDS 2077259 2077645 . - 0 ID=cds2117;Parent=gene2152;Dbxref=Genbank:WP_038468608.1;Name=WP_038468608.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=ribonucleotide reductase stimulatory protein;protein_id=WP_038468608.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2077655 2077894 . - . ID=gene2153;Name=SOPEG_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10635;old_locus_tag=SOPEG_1988 NZ_CP006568.1 Protein Homology CDS 2077655 2077894 . - 0 ID=cds2118;Parent=gene2153;Dbxref=Genbank:WP_025245318.1;Name=WP_025245318.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_025245318.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2078326 2078511 . - . ID=gene2154;Name=SOPEG_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22855 NZ_CP006568.1 Protein Homology CDS 2078326 2078511 . - 0 ID=cds2119;Parent=gene2154;Dbxref=Genbank:WP_051419630.1;Name=WP_051419630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419630.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2079006 2079197 . + . ID=gene2155;Name=SOPEG_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10645 NZ_CP006568.1 GeneMarkS+ CDS 2079006 2079197 . + 0 ID=cds2120;Parent=gene2155;Dbxref=Genbank:WP_038468611.1;Name=WP_038468611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468611.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2079180 2080240 . + . ID=id313;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2079258 2080181 . + . ID=gene2156;Name=SOPEG_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10650;old_locus_tag=SOPEG_1990 NZ_CP006568.1 Protein Homology CDS 2079258 2080181 . + 0 ID=cds2121;Parent=gene2156;Dbxref=Genbank:WP_025245319.1;Name=WP_025245319.1;gbkey=CDS;product=transposase;protein_id=WP_025245319.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2080423 2083028 . + . ID=id314;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2080630 2081712 . + . ID=gene2157;Name=SOPEG_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10655 NZ_CP006568.1 Protein Homology CDS 2080630 2081712 . + 0 ID=cds2122;Parent=gene2157;Dbxref=Genbank:WP_025245320.1;Name=WP_025245320.1;gbkey=CDS;product=transposase;protein_id=WP_025245320.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2082374 2083027 . - . ID=gene2158;Name=SOPEG_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10660 NZ_CP006568.1 Protein Homology CDS 2082374 2083027 . - 0 ID=cds2123;Parent=gene2158;Dbxref=Genbank:WP_025245321.1;Name=WP_025245321.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_025245321.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2083017 2083232 . - . ID=gene2159;Name=SOPEG_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10665 NZ_CP006568.1 Protein Homology CDS 2083017 2083232 . - 0 ID=cds2124;Parent=gene2159;Dbxref=Genbank:WP_025245322.1;Name=WP_025245322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245322.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2083240 2083530 . - . ID=gene2160;Name=SOPEG_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10670 NZ_CP006568.1 Protein Homology CDS 2083240 2083530 . - 0 ID=cds2125;Parent=gene2160;Dbxref=Genbank:WP_025245323.1;Name=WP_025245323.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245323.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2083542 2084471 . - . ID=gene2161;Name=SOPEG_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10675;old_locus_tag=SOPEG_1995 NZ_CP006568.1 Protein Homology CDS 2083542 2084471 . - 0 ID=cds2126;Parent=gene2161;Dbxref=Genbank:WP_025245324.1;Name=WP_025245324.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025245324.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2084483 2086527 . - . ID=gene2162;Name=SOPEG_RS10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10680;pseudo=true NZ_CP006568.1 Protein Homology CDS 2084483 2086527 . - 0 ID=cds2127;Parent=gene2162;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(2086129..2086131)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2086884 2087549 . + . ID=gene2163;Name=SOPEG_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22860;old_locus_tag=SOPEG_ps1998 NZ_CP006568.1 Protein Homology CDS 2086884 2087549 . + 0 ID=cds2128;Parent=gene2163;Dbxref=Genbank:WP_025245325.1;Name=WP_025245325.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245325.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2087371 2089115 . + . ID=id315;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2087634 2088842 . - . ID=gene2164;Name=SOPEG_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10690;old_locus_tag=SOPEG_1999 NZ_CP006568.1 Protein Homology CDS 2087634 2088842 . - 0 ID=cds2129;Parent=gene2164;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2089838 2090339 . - . ID=gene2165;Name=SOPEG_RS10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10695;pseudo=true NZ_CP006568.1 Protein Homology CDS 2089838 2090339 . - 0 ID=cds2130;Parent=gene2165;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2090349 2091878 . - . ID=gene2166;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=SOPEG_RS10700;old_locus_tag=SOPEG_2001 NZ_CP006568.1 Protein Homology CDS 2090349 2091878 . - 0 ID=cds2131;Parent=gene2166;Dbxref=Genbank:WP_025245326.1;Name=WP_025245326.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein acyltransferase;protein_id=WP_025245326.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2091886 2092764 . - . ID=gene2167;Name=SOPEG_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10705;old_locus_tag=SOPEG_2002 NZ_CP006568.1 Protein Homology CDS 2091886 2092764 . - 0 ID=cds2132;Parent=gene2167;Dbxref=Genbank:WP_025245327.1;Name=WP_025245327.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=magnesium/cobalt efflux protein CorC;protein_id=WP_025245327.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2092811 2093281 . - . ID=gene2168;Name=SOPEG_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10710;old_locus_tag=SOPEG_2003 NZ_CP006568.1 Protein Homology CDS 2092811 2093281 . - 0 ID=cds2133;Parent=gene2168;Dbxref=Genbank:WP_025245328.1;Name=WP_025245328.1;gbkey=CDS;product=16S rRNA maturation RNase YbeY;protein_id=WP_025245328.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2093278 2094372 . - . ID=gene2169;Name=SOPEG_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10715;old_locus_tag=SOPEG_2004 NZ_CP006568.1 Protein Homology CDS 2093278 2094372 . - 0 ID=cds2134;Parent=gene2169;Dbxref=Genbank:WP_025245329.1;Name=WP_025245329.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_025245329.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2094578 2096002 . - . ID=gene2170;Name=SOPEG_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10720;old_locus_tag=SOPEG_2005 NZ_CP006568.1 Protein Homology CDS 2094578 2096002 . - 0 ID=cds2135;Parent=gene2170;Dbxref=Genbank:WP_038468615.1;Name=WP_038468615.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=dimethylallyladenosine tRNA methylthiotransferase;protein_id=WP_038468615.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2096176 2097357 . + . ID=gene2171;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=SOPEG_RS10725;old_locus_tag=SOPEG_2006 NZ_CP006568.1 Protein Homology CDS 2096176 2097357 . + 0 ID=cds2136;Parent=gene2171;Dbxref=Genbank:WP_025245331.1;Name=WP_025245331.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_025245331.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2097653 2098977 . + . ID=id316;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2097693 2098901 . - . ID=gene2172;Name=SOPEG_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10730;old_locus_tag=SOPEG_2007 NZ_CP006568.1 Protein Homology CDS 2097693 2098901 . - 0 ID=cds2137;Parent=gene2172;Dbxref=Genbank:WP_025245332.1;Name=WP_025245332.1;gbkey=CDS;product=transposase;protein_id=WP_025245332.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2099365 2100685 . + . ID=id317;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2099441 2100503 . + . ID=gene2173;Name=SOPEG_RS10735;end_range=2100503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10735;old_locus_tag=SOPEG_2008;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2099441 2100503 . + 0 ID=cds2138;Parent=gene2173;end_range=2100503,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2101278 2101547 . - . ID=gene2174;Name=SOPEG_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10740;old_locus_tag=SOPEG_2009 NZ_CP006568.1 Protein Homology CDS 2101278 2101547 . - 0 ID=cds2139;Parent=gene2174;Dbxref=Genbank:WP_025245333.1;Name=WP_025245333.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025245333.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2101628 2101936 . + . ID=gene2175;Name=SOPEG_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10745;old_locus_tag=SOPEG_2010 NZ_CP006568.1 Protein Homology CDS 2101628 2101936 . + 0 ID=cds2140;Parent=gene2175;Dbxref=Genbank:WP_038468619.1;Name=WP_038468619.1;gbkey=CDS;product=repressor;protein_id=WP_038468619.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2102001 2102990 . + . ID=gene2176;Name=SOPEG_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10750;old_locus_tag=SOPEG_2011 NZ_CP006568.1 Protein Homology CDS 2102001 2102990 . + 0 ID=cds2141;Parent=gene2176;Dbxref=Genbank:WP_025245335.1;Name=WP_025245335.1;gbkey=CDS;product=integrase;protein_id=WP_025245335.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2103464 2103874 . + . ID=gene2177;Name=SOPEG_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22865;old_locus_tag=SOPEG_2012 NZ_CP006568.1 Protein Homology CDS 2103464 2103874 . + 0 ID=cds2142;Parent=gene2177;Dbxref=Genbank:WP_025245336.1;Name=WP_025245336.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245336.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2103572 2103940 . + . ID=id318;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2103992 2104213 . - . ID=gene2178;Name=artM;gbkey=Gene;gene=artM;gene_biotype=pseudogene;locus_tag=SOPEG_RS10760;partial=true;pseudo=true;start_range=.,2103992 NZ_CP006568.1 Protein Homology CDS 2103992 2104213 . - 0 ID=cds2143;Parent=gene2178;Note=with ArtPQJI acts to transport arginine across the inner membrane;exception=unextendable partial coding region;gbkey=CDS;gene=artM;partial=true;product=arginine transporter permease subunit ArtM;pseudo=true;start_range=.,2103992;transl_table=11 NZ_CP006568.1 RefSeq gene 2104213 2104930 . - . ID=gene2179;Name=SOPEG_RS10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10765;pseudo=true NZ_CP006568.1 Protein Homology CDS 2104213 2104930 . - 0 ID=cds2144;Parent=gene2179;Note=with ArtPMJI transports arginine across the inner membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arginine transporter permease subunit ArtQ;pseudo=true;transl_except=(pos:complement(2104567..2104569)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2104940 2105671 . - . ID=gene2180;Name=SOPEG_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10770;old_locus_tag=SOPEG_2015 NZ_CP006568.1 Protein Homology CDS 2104940 2105671 . - 0 ID=cds2145;Parent=gene2180;Dbxref=Genbank:WP_025245338.1;Name=WP_025245338.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_025245338.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2105692 2106441 . - . ID=gene2181;Name=SOPEG_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10775;old_locus_tag=SOPEG_2016 NZ_CP006568.1 Protein Homology CDS 2105692 2106441 . - 0 ID=cds2146;Parent=gene2181;Dbxref=Genbank:WP_025245339.1;Name=WP_025245339.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_025245339.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2106632 2107183 . - . ID=gene2182;Name=SOPEG_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10780;old_locus_tag=SOPEG_2017 NZ_CP006568.1 Protein Homology CDS 2106632 2107183 . - 0 ID=cds2147;Parent=gene2182;Dbxref=Genbank:WP_025245340.1;Name=WP_025245340.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_025245340.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2107330 2107992 . + . ID=gene2183;Name=SOPEG_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10785 NZ_CP006568.1 Protein Homology CDS 2107330 2107992 . + 0 ID=cds2148;Parent=gene2183;Dbxref=Genbank:WP_051419632.1;Name=WP_051419632.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419632.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2107954 2109004 . - . ID=gene2184;Name=SOPEG_RS10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10790;pseudo=true NZ_CP006568.1 Protein Homology CDS 2107954 2109004 . - 0 ID=cds2149;Parent=gene2184;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=threonine aldolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2109090 2110799 . - . ID=gene2185;Name=SOPEG_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10795;old_locus_tag=SOPEG_2020 NZ_CP006568.1 Protein Homology CDS 2109090 2110799 . - 0 ID=cds2150;Parent=gene2185;Dbxref=Genbank:WP_025245342.1;Name=WP_025245342.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_025245342.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2110923 2111733 . - . ID=gene2186;Name=SOPEG_RS10800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10800;pseudo=true NZ_CP006568.1 Protein Homology CDS 2110923 2111733 . - 0 ID=cds2151;Parent=gene2186;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2112019 2112240 . - . ID=gene2187;Name=SOPEG_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10805 NZ_CP006568.1 Protein Homology CDS 2112019 2112240 . - 0 ID=cds2152;Parent=gene2187;Dbxref=Genbank:WP_025245343.1;Name=WP_025245343.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=stationary phase/starvation inducible regulatory protein CspD;protein_id=WP_025245343.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2112558 2112878 . + . ID=gene2188;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=SOPEG_RS10810;old_locus_tag=SOPEG_2023 NZ_CP006568.1 Protein Homology CDS 2112558 2112878 . + 0 ID=cds2153;Parent=gene2188;Dbxref=Genbank:WP_025245344.1;Name=WP_025245344.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_025245344.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2112906 2115182 . + . ID=gene2189;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=SOPEG_RS10815;old_locus_tag=SOPEG_2024 NZ_CP006568.1 Protein Homology CDS 2112906 2115182 . + 0 ID=cds2154;Parent=gene2189;Dbxref=Genbank:WP_025245345.1;Name=WP_025245345.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_025245345.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2115760 2117081 . + . ID=id319;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2115798 2116016 . - . ID=gene2190;Name=SOPEG_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10820 NZ_CP006568.1 Protein Homology CDS 2115798 2116016 . - 0 ID=cds2155;Parent=gene2190;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2116018 2116881 . - . ID=gene2191;Name=SOPEG_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10825 NZ_CP006568.1 Protein Homology CDS 2116018 2116881 . - 0 ID=cds2156;Parent=gene2191;Dbxref=Genbank:WP_025245346.1;Name=WP_025245346.1;gbkey=CDS;product=transposase;protein_id=WP_025245346.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2116878 2117006 . - . ID=gene2192;Name=SOPEG_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10830 NZ_CP006568.1 Protein Homology CDS 2116878 2117006 . - 0 ID=cds2157;Parent=gene2192;Dbxref=Genbank:WP_025245347.1;Name=WP_025245347.1;gbkey=CDS;product=transposase;protein_id=WP_025245347.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2117083 2117301 . - . ID=gene2193;Name=SOPEG_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10835;old_locus_tag=SOPEG_2026 NZ_CP006568.1 Protein Homology CDS 2117083 2117301 . - 0 ID=cds2158;Parent=gene2193;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2117394 2118116 . - . ID=gene2194;Name=SOPEG_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10840;old_locus_tag=SOPEG_2027 NZ_CP006568.1 Protein Homology CDS 2117394 2118116 . - 0 ID=cds2159;Parent=gene2194;Dbxref=Genbank:WP_025245348.1;Name=WP_025245348.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_025245348.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2118205 2119923 . - . ID=gene2195;Name=SOPEG_RS10845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10845;old_locus_tag=SOPEG_2028;partial=true;pseudo=true;start_range=.,2118205 NZ_CP006568.1 Protein Homology CDS 2118205 2119923 . - 0 ID=cds2160;Parent=gene2195;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=amino acid ABC transporter permease;pseudo=true;start_range=.,2118205;transl_table=11 NZ_CP006568.1 RefSeq gene 2119926 2121689 . - . ID=gene2196;Name=SOPEG_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10850;old_locus_tag=SOPEG_2029 NZ_CP006568.1 Protein Homology CDS 2119926 2121689 . - 0 ID=cds2161;Parent=gene2196;Dbxref=Genbank:WP_025245350.1;Name=WP_025245350.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_025245350.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2122144 2123112 . - . ID=gene2197;Name=SOPEG_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10855;old_locus_tag=SOPEG_2030 NZ_CP006568.1 Protein Homology CDS 2122144 2123112 . - 0 ID=cds2162;Parent=gene2197;Dbxref=Genbank:WP_025245351.1;Name=WP_025245351.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_025245351.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2123622 2124116 . + . ID=gene2198;Name=SOPEG_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10860;old_locus_tag=SOPEG_2031 NZ_CP006568.1 Protein Homology CDS 2123622 2124116 . + 0 ID=cds2163;Parent=gene2198;Dbxref=Genbank:WP_025245352.1;Name=WP_025245352.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=leucine-responsive transcriptional regulator;protein_id=WP_025245352.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2124241 2127240 . + . ID=gene2199;Name=SOPEG_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10865;old_locus_tag=SOPEG_2032 NZ_CP006568.1 Protein Homology CDS 2124241 2127240 . + 0 ID=cds2164;Parent=gene2199;Dbxref=Genbank:WP_025245353.1;Name=WP_025245353.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_025245353.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2127393 2128004 . + . ID=gene2200;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=SOPEG_RS10870;old_locus_tag=SOPEG_2033 NZ_CP006568.1 Protein Homology CDS 2127393 2128004 . + 0 ID=cds2165;Parent=gene2200;Dbxref=Genbank:WP_025245354.1;Name=WP_025245354.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_025245354.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2128012 2129357 . + . ID=gene2201;Name=SOPEG_RS10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10875;pseudo=true NZ_CP006568.1 Protein Homology CDS 2128012 2129357 . + 0 ID=cds2166;Parent=gene2201;exception=annotated by transcript or proteomic data;gbkey=CDS;product=recombination factor protein RarA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2129478 2130770 . + . ID=gene2202;Name=SOPEG_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10880;old_locus_tag=SOPEG_2035 NZ_CP006568.1 Protein Homology CDS 2129478 2130770 . + 0 ID=cds2167;Parent=gene2202;Dbxref=Genbank:WP_025245355.1;Name=WP_025245355.1;gbkey=CDS;product=seryl-tRNA synthetase;protein_id=WP_025245355.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2130941 2132086 . + . ID=gene2203;Name=SOPEG_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10885;old_locus_tag=SOPEG_2036 NZ_CP006568.1 Protein Homology CDS 2130941 2132086 . + 0 ID=cds2168;Parent=gene2203;Dbxref=Genbank:WP_025245356.1;Name=WP_025245356.1;gbkey=CDS;product=MFS transporter;protein_id=WP_025245356.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2132352 2134107 . - . ID=gene2204;Name=SOPEG_RS10890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10890;pseudo=true NZ_CP006568.1 Protein Homology CDS 2132352 2134107 . - 0 ID=cds2169;Parent=gene2204;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(2134042..2134044)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2134295 2135035 . - . ID=gene2205;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SOPEG_RS10895;old_locus_tag=SOPEG_2038 NZ_CP006568.1 Protein Homology CDS 2134295 2135035 . - 0 ID=cds2170;Parent=gene2205;Dbxref=Genbank:WP_025245357.1;Name=WP_025245357.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating enzyme 1;protein_id=WP_025245357.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2135207 2137489 . - . ID=gene2206;Name=SOPEG_RS10900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10900;pseudo=true NZ_CP006568.1 Protein Homology CDS 2135207 2137489 . - 0 ID=cds2171;Parent=gene2206;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=pyruvate formate-lyase;pseudo=true;transl_except=(pos:complement(2135930..2135932)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2137576 2138128 . - . ID=gene2207;Name=SOPEG_RS10905;end_range=2138128,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10905;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2137576 2138128 . - 0 ID=cds2172;Parent=gene2207;end_range=2138128,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=formate transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2138127 2141419 . + . ID=id320;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2138206 2138670 . + . ID=gene2208;Name=SOPEG_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22870 NZ_CP006568.1 Protein Homology CDS 2138206 2138670 . + 0 ID=cds2173;Parent=gene2208;Dbxref=Genbank:WP_051419634.1;Name=WP_051419634.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419634.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2138684 2139100 . + . ID=gene2209;Name=SOPEG_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22875 NZ_CP006568.1 Protein Homology CDS 2138684 2139100 . + 0 ID=cds2174;Parent=gene2209;Dbxref=Genbank:WP_051420003.1;Name=WP_051420003.1;gbkey=CDS;product=transposase;protein_id=WP_051420003.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2139093 2139233 . - . ID=gene2210;Name=SOPEG_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10915 NZ_CP006568.1 Protein Homology CDS 2139093 2139233 . - 0 ID=cds2175;Parent=gene2210;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2139354 2140562 . + . ID=gene2211;Name=SOPEG_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10920;old_locus_tag=SOPEG_2043 NZ_CP006568.1 Protein Homology CDS 2139354 2140562 . + 0 ID=cds2176;Parent=gene2211;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2140876 2141340 . - . ID=gene2212;Name=SOPEG_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10925 NZ_CP006568.1 Protein Homology CDS 2140876 2141340 . - 0 ID=cds2177;Parent=gene2212;Dbxref=Genbank:WP_025245359.1;Name=WP_025245359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245359.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2141452 2143064 . - . ID=gene2213;Name=SOPEG_RS10930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10930;partial=true;pseudo=true;start_range=.,2141452 NZ_CP006568.1 Protein Homology CDS 2141452 2143064 . - 0 ID=cds2178;Parent=gene2213;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;pseudo=true;start_range=.,2141452;transl_table=11 NZ_CP006568.1 RefSeq gene 2143273 2144358 . + . ID=gene2214;Name=SOPEG_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10935;old_locus_tag=SOPEG_2045 NZ_CP006568.1 Protein Homology CDS 2143273 2144358 . + 0 ID=cds2179;Parent=gene2214;Dbxref=Genbank:WP_025245360.1;Name=WP_025245360.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=WP_025245360.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2144778 2146085 . + . ID=gene2215;Name=SOPEG_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10940;old_locus_tag=SOPEG_2046 NZ_CP006568.1 Protein Homology CDS 2144778 2146085 . + 0 ID=cds2180;Parent=gene2215;Dbxref=Genbank:WP_025245361.1;Name=WP_025245361.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_025245361.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2146193 2146876 . + . ID=gene2216;Name=SOPEG_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10945;old_locus_tag=SOPEG_2047 NZ_CP006568.1 Protein Homology CDS 2146193 2146876 . + 0 ID=cds2181;Parent=gene2216;Dbxref=Genbank:WP_025245362.1;Name=WP_025245362.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_025245362.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2146991 2148667 . + . ID=gene2217;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SOPEG_RS10950;old_locus_tag=SOPEG_2048 NZ_CP006568.1 Protein Homology CDS 2146991 2148667 . + 0 ID=cds2182;Parent=gene2217;Dbxref=Genbank:WP_025245363.1;Name=WP_025245363.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_025245363.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2148760 2149044 . + . ID=gene2218;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=SOPEG_RS10955;old_locus_tag=SOPEG_2049 NZ_CP006568.1 Protein Homology CDS 2148760 2149044 . + 0 ID=cds2183;Parent=gene2218;Dbxref=Genbank:WP_025245364.1;Name=WP_025245364.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_025245364.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2149221 2149829 . + . ID=gene2219;Name=SOPEG_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22880;old_locus_tag=SOPEG_ps2050 NZ_CP006568.1 Protein Homology CDS 2149221 2149829 . + 0 ID=cds2184;Parent=gene2219;Dbxref=Genbank:WP_025245365.1;Name=WP_025245365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245365.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2149816 2150859 . - . ID=gene2220;Name=SOPEG_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10965;old_locus_tag=SOPEG_2051 NZ_CP006568.1 Protein Homology CDS 2149816 2150859 . - 0 ID=cds2185;Parent=gene2220;Dbxref=Genbank:WP_025245366.1;Name=WP_025245366.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_025245366.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2151043 2151669 . + . ID=gene2221;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SOPEG_RS10970;old_locus_tag=SOPEG_2052 NZ_CP006568.1 Protein Homology CDS 2151043 2151669 . + 0 ID=cds2186;Parent=gene2221;Dbxref=Genbank:WP_025245367.1;Name=WP_025245367.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_025245367.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2151666 2152421 . + . ID=gene2222;Name=SOPEG_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10975;old_locus_tag=SOPEG_2053 NZ_CP006568.1 Protein Homology CDS 2151666 2152421 . + 0 ID=cds2187;Parent=gene2222;Dbxref=Genbank:WP_025245368.1;Name=WP_025245368.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245368.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2152434 2152670 . + . ID=gene2223;Name=SOPEG_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10980 NZ_CP006568.1 Protein Homology CDS 2152434 2152670 . + 0 ID=cds2188;Parent=gene2223;Dbxref=Genbank:WP_025245369.1;Name=WP_025245369.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor;protein_id=WP_025245369.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2152632 2156568 . + . ID=id321;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2152828 2153890 . - . ID=gene2224;Name=SOPEG_RS10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS10985;partial=true;pseudo=true;start_range=.,2152828 NZ_CP006568.1 Protein Homology CDS 2152828 2153890 . - 0 ID=cds2189;Parent=gene2224;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2152828;transl_table=11 NZ_CP006568.1 RefSeq gene 2154088 2154837 . - . ID=gene2225;Name=SOPEG_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10990;old_locus_tag=SOPEG_2056 NZ_CP006568.1 Protein Homology CDS 2154088 2154837 . - 0 ID=cds2190;Parent=gene2225;Dbxref=Genbank:WP_025245370.1;Name=WP_025245370.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245370.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2154849 2156366 . - . ID=gene2226;Name=SOPEG_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS10995;old_locus_tag=SOPEG_2057 NZ_CP006568.1 Protein Homology CDS 2154849 2156366 . - 0 ID=cds2191;Parent=gene2226;Dbxref=Genbank:WP_038468630.1;Name=WP_038468630.1;gbkey=CDS;product=transposase;protein_id=WP_038468630.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2156857 2157246 . - . ID=gene2227;Name=SOPEG_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11000;old_locus_tag=SOPEG_2058 NZ_CP006568.1 Protein Homology CDS 2156857 2157246 . - 0 ID=cds2192;Parent=gene2227;Dbxref=Genbank:WP_025245372.1;Name=WP_025245372.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_025245372.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2157376 2160084 . - . ID=gene2228;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SOPEG_RS11005;old_locus_tag=SOPEG_2059 NZ_CP006568.1 Protein Homology CDS 2157376 2160084 . - 0 ID=cds2193;Parent=gene2228;Dbxref=Genbank:WP_025245373.1;Name=WP_025245373.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=WP_025245373.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2160161 2160664 . - . ID=gene2229;Name=SOPEG_RS11010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11010;pseudo=true NZ_CP006568.1 Protein Homology CDS 2160161 2160664 . - 0 ID=cds2194;Parent=gene2229;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2160551..2160553)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2160697 2161224 . + . ID=gene2230;Name=SOPEG_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11015;old_locus_tag=SOPEG_2061 NZ_CP006568.1 Protein Homology CDS 2160697 2161224 . + 0 ID=cds2195;Parent=gene2230;Dbxref=Genbank:WP_025245374.1;Name=WP_025245374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245374.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2161301 2162218 . - . ID=gene2231;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=SOPEG_RS11020;old_locus_tag=SOPEG_2062 NZ_CP006568.1 Protein Homology CDS 2161301 2162218 . - 0 ID=cds2196;Parent=gene2231;Dbxref=Genbank:WP_025245375.1;Name=WP_025245375.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_025245375.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2162325 2163485 . - . ID=gene2232;Name=SOPEG_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11025;old_locus_tag=SOPEG_2063 NZ_CP006568.1 Protein Homology CDS 2162325 2163485 . - 0 ID=cds2197;Parent=gene2232;Dbxref=Genbank:WP_025245376.1;Name=WP_025245376.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_025245376.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2163558 2164814 . - . ID=gene2233;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SOPEG_RS11030;old_locus_tag=SOPEG_2064 NZ_CP006568.1 Protein Homology CDS 2163558 2164814 . - 0 ID=cds2198;Parent=gene2233;Dbxref=Genbank:WP_025245377.1;Name=WP_025245377.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_025245377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2164811 2165647 . - . ID=gene2234;Name=SOPEG_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11035;old_locus_tag=SOPEG_2065 NZ_CP006568.1 Protein Homology CDS 2164811 2165647 . - 0 ID=cds2199;Parent=gene2234;Dbxref=Genbank:WP_025245378.1;Name=WP_025245378.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_025245378.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2165704 2167176 . - . ID=gene2235;Name=SOPEG_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11040;old_locus_tag=SOPEG_2066 NZ_CP006568.1 Protein Homology CDS 2165704 2167176 . - 0 ID=cds2200;Parent=gene2235;Dbxref=Genbank:WP_025245379.1;Name=WP_025245379.1;gbkey=CDS;product=UDP-N-acetylmuramate--alanine ligase;protein_id=WP_025245379.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2167241 2168308 . - . ID=gene2236;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SOPEG_RS11045;old_locus_tag=SOPEG_2067 NZ_CP006568.1 Protein Homology CDS 2167241 2168308 . - 0 ID=cds2201;Parent=gene2236;Dbxref=Genbank:WP_025245380.1;Name=WP_025245380.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=WP_025245380.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2168305 2169507 . - . ID=gene2237;Name=SOPEG_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11050;old_locus_tag=SOPEG_2068 NZ_CP006568.1 Protein Homology CDS 2168305 2169507 . - 0 ID=cds2202;Parent=gene2237;Dbxref=Genbank:WP_025245381.1;Name=WP_025245381.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_025245381.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2169507 2170823 . - . ID=gene2238;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SOPEG_RS11055;old_locus_tag=SOPEG_2069 NZ_CP006568.1 Protein Homology CDS 2169507 2170823 . - 0 ID=cds2203;Parent=gene2238;Dbxref=Genbank:WP_025245382.1;Name=WP_025245382.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_025245382.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2170826 2171908 . - . ID=gene2239;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SOPEG_RS11060;old_locus_tag=SOPEG_2070 NZ_CP006568.1 Protein Homology CDS 2170826 2171908 . - 0 ID=cds2204;Parent=gene2239;Dbxref=Genbank:WP_025245383.1;Name=WP_025245383.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_025245383.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2171902 2173269 . - . ID=gene2240;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SOPEG_RS11065;old_locus_tag=SOPEG_2071 NZ_CP006568.1 Protein Homology CDS 2171902 2173269 . - 0 ID=cds2205;Parent=gene2240;Dbxref=Genbank:WP_025245384.1;Name=WP_025245384.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_025245384.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2173274 2174755 . - . ID=gene2241;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SOPEG_RS11070;old_locus_tag=SOPEG_2072 NZ_CP006568.1 Protein Homology CDS 2173274 2174755 . - 0 ID=cds2206;Parent=gene2241;Dbxref=Genbank:WP_025245385.1;Name=WP_025245385.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_025245385.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2174769 2176514 . - . ID=gene2242;Name=SOPEG_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11075;old_locus_tag=SOPEG_2073 NZ_CP006568.1 Protein Homology CDS 2174769 2176514 . - 0 ID=cds2207;Parent=gene2242;Dbxref=Genbank:WP_038468634.1;Name=WP_038468634.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_038468634.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2176540 2176860 . - . ID=gene2243;Name=SOPEG_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11080;old_locus_tag=SOPEG_2074 NZ_CP006568.1 Protein Homology CDS 2176540 2176860 . - 0 ID=cds2208;Parent=gene2243;Dbxref=Genbank:WP_025245386.1;Name=WP_025245386.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_025245386.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2176857 2177804 . - . ID=gene2244;Name=SOPEG_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11085;old_locus_tag=SOPEG_2075 NZ_CP006568.1 Protein Homology CDS 2176857 2177804 . - 0 ID=cds2209;Parent=gene2244;Dbxref=Genbank:WP_025245387.1;Name=WP_025245387.1;gbkey=CDS;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=WP_025245387.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2177807 2178265 . - . ID=gene2245;Name=SOPEG_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11090;old_locus_tag=SOPEG_2076 NZ_CP006568.1 Protein Homology CDS 2177807 2178265 . - 0 ID=cds2210;Parent=gene2245;Dbxref=Genbank:WP_011410413.1;Name=WP_011410413.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_011410413.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2179606 2180610 . - . ID=gene2246;Name=SOPEG_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11095;old_locus_tag=SOPEG_2078 NZ_CP006568.1 Protein Homology CDS 2179606 2180610 . - 0 ID=cds2211;Parent=gene2246;Dbxref=Genbank:WP_025245388.1;Name=WP_025245388.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245388.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2181075 2181572 . - . ID=gene2247;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=SOPEG_RS11100;old_locus_tag=SOPEG_2079 NZ_CP006568.1 Protein Homology CDS 2181075 2181572 . - 0 ID=cds2212;Parent=gene2247;Dbxref=Genbank:WP_025245389.1;Name=WP_025245389.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase 3 regulatory subunit;protein_id=WP_025245389.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2181575 2183295 . - . ID=gene2248;Name=SOPEG_RS11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11105;pseudo=true NZ_CP006568.1 Protein Homology CDS 2181575 2183295 . - 0 ID=cds2213;Parent=gene2248;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetolactate synthase 3 catalytic subunit;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2183871 2185448 . + . ID=gene2249;Name=SOPEG_RS11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11110;pseudo=true NZ_CP006568.1 Protein Homology CDS 2183871 2185448 . + 0 ID=cds2214;Parent=gene2249;gbkey=CDS;product=2-isopropylmalate synthase;pseudo=true;transl_except=(pos:2183958..2183960%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2185451 2186509 . + . ID=gene2250;Name=SOPEG_RS11115;end_range=2186509,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11115;old_locus_tag=SOPEG_2082;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2185451 2186509 . + 0 ID=cds2215;Parent=gene2250;end_range=2186509,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-isopropylmalate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2186438 2187712 . + . ID=gene2251;Name=SOPEG_RS11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11120;pseudo=true NZ_CP006568.1 Protein Homology CDS 2186438 2187712 . + 0 ID=cds2216;Parent=gene2251;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=isopropylmalate isomerase;pseudo=true;transl_except=(pos:2186630..2186632%2Caa:Other),(pos:2187074..2187076%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2187723 2188325 . + . ID=gene2252;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SOPEG_RS11125;old_locus_tag=SOPEG_2084 NZ_CP006568.1 Protein Homology CDS 2187723 2188325 . + 0 ID=cds2217;Parent=gene2252;Dbxref=Genbank:WP_025245390.1;Name=WP_025245390.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=isopropylmalate isomerase;protein_id=WP_025245390.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2188555 2188770 . + . ID=gene2253;Name=SOPEG_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11130 NZ_CP006568.1 GeneMarkS+ CDS 2188555 2188770 . + 0 ID=cds2218;Parent=gene2253;Dbxref=Genbank:WP_025245391.1;Name=WP_025245391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245391.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2188833 2190515 . + . ID=gene2254;Name=SOPEG_RS11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11135;pseudo=true NZ_CP006568.1 Protein Homology CDS 2188833 2190515 . + 0 ID=cds2219;Parent=gene2254;Note=activates sgrS under glucose-phosphate stress conditions;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator SgrR;pseudo=true;transl_except=(pos:2190014..2190016%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2190797 2191527 . + . ID=gene2255;Name=tbpA;end_range=2191527,.;gbkey=Gene;gene=tbpA;gene_biotype=pseudogene;locus_tag=SOPEG_RS11140;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2190797 2191527 . + 0 ID=cds2220;Parent=gene2255;Note=part of the thiamine and TPP transport system tbpA-thiPQ;end_range=2191527,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=tbpA;partial=true;product=thiamine ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2191519 2192848 . + . ID=id322;gbkey=repeat_region;gene=tbpA NZ_CP006568.1 RefSeq gene 2191562 2191903 . - . ID=gene2256;Name=SOPEG_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22885 NZ_CP006568.1 Protein Homology CDS 2191562 2191903 . - 0 ID=cds2221;Parent=gene2256;Dbxref=Genbank:WP_025245392.1;Name=WP_025245392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245392.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2191929 2192771 . - . ID=gene2257;Name=SOPEG_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11145 NZ_CP006568.1 Protein Homology CDS 2191929 2192771 . - 0 ID=cds2222;Parent=gene2257;Dbxref=Genbank:WP_025245393.1;Name=WP_025245393.1;gbkey=CDS;product=transposase;protein_id=WP_025245393.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2192835 2195259 . - . ID=gene2258;Name=SOPEG_RS11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11150;partial=true;pseudo=true;start_range=.,2192835 NZ_CP006568.1 Protein Homology CDS 2192835 2195259 . - 0 ID=cds2223;Parent=gene2258;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=cation transporter;pseudo=true;start_range=.,2192835;transl_table=11 NZ_CP006568.1 RefSeq gene 2195256 2196830 . - . ID=gene2259;Name=SOPEG_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11155;old_locus_tag=SOPEG_2089;pseudo=true NZ_CP006568.1 Protein Homology CDS 2195256 2196830 . - 0 ID=cds2224;Parent=gene2259;gbkey=CDS;product=cobalt transporter;pseudo=true;transl_except=(pos:complement(2195349..2195351)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2196827 2197909 . - . ID=gene2260;Name=SOPEG_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11160 NZ_CP006568.1 Protein Homology CDS 2196827 2197909 . - 0 ID=cds2225;Parent=gene2260;Dbxref=Genbank:WP_025245395.1;Name=WP_025245395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245395.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2198162 2198512 . - . ID=gene2261;Name=SOPEG_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11165;old_locus_tag=SOPEG_2091 NZ_CP006568.1 Protein Homology CDS 2198162 2198512 . - 0 ID=cds2226;Parent=gene2261;Dbxref=Genbank:WP_025245396.1;Name=WP_025245396.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245396.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2199114 2199560 . - . ID=gene2262;Name=SOPEG_RS11170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11170;partial=true;pseudo=true;start_range=.,2199114 NZ_CP006568.1 Protein Homology CDS 2199114 2199560 . - 0 ID=cds2227;Parent=gene2262;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;partial=true;product=anaerobic ribonucleoside-triphosphate reductase activating protein;pseudo=true;start_range=.,2199114;transl_except=(pos:complement(2199474..2199476)%2Caa:Other),(pos:complement(2199360..2199362)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2199567 2200136 . - . ID=gene2263;Name=SOPEG_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11175 NZ_CP006568.1 Protein Homology CDS 2199567 2200136 . - 0 ID=cds2228;Parent=gene2263;Dbxref=Genbank:WP_025245397.1;Name=WP_025245397.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245397.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2200176 2200327 . + . ID=id323;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2200410 2201021 . - . ID=gene2264;Name=SOPEG_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22890;old_locus_tag=SOPEG_ps2094 NZ_CP006568.1 Protein Homology CDS 2200410 2201021 . - 0 ID=cds2229;Parent=gene2264;Dbxref=Genbank:WP_025245398.1;Name=WP_025245398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245398.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2201459 2203501 . + . ID=gene2265;Name=SOPEG_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11185 NZ_CP006568.1 Protein Homology CDS 2201459 2203501 . + 0 ID=cds2230;Parent=gene2265;Dbxref=Genbank:WP_025245400.1;Name=WP_025245400.1;gbkey=CDS;product=transposase;protein_id=WP_025245400.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2203410 2206736 . + . ID=id324;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2203469 2204392 . - . ID=gene2266;Name=SOPEG_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11190;old_locus_tag=SOPEG_2097 NZ_CP006568.1 Protein Homology CDS 2203469 2204392 . - 0 ID=cds2231;Parent=gene2266;Dbxref=Genbank:WP_025244443.1;Name=WP_025244443.1;gbkey=CDS;product=transposase;protein_id=WP_025244443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2204579 2205509 . + . ID=gene2267;Name=SOPEG_RS11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11195;pseudo=true NZ_CP006568.1 Protein Homology CDS 2204579 2205509 . + 0 ID=cds2232;Parent=gene2267;exception=annotated by transcript or proteomic data;gbkey=CDS;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2205521 2205811 . + . ID=gene2268;Name=SOPEG_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11200 NZ_CP006568.1 Protein Homology CDS 2205521 2205811 . + 0 ID=cds2233;Parent=gene2268;Dbxref=Genbank:WP_025245401.1;Name=WP_025245401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245401.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2206000 2206629 . + . ID=gene2269;Name=SOPEG_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11205;old_locus_tag=SOPEG_2100 NZ_CP006568.1 Protein Homology CDS 2206000 2206629 . + 0 ID=cds2234;Parent=gene2269;Dbxref=Genbank:WP_025245402.1;Name=WP_025245402.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_025245402.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2206633 2206824 . + . ID=gene2270;Name=SOPEG_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11210;old_locus_tag=SOPEG_2101 NZ_CP006568.1 Protein Homology CDS 2206633 2206824 . + 0 ID=cds2235;Parent=gene2270;Dbxref=Genbank:WP_025245403.1;Name=WP_025245403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245403.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2206803 2207056 . + . ID=id325;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 2207063 2208129 . + . ID=id326;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2207145 2207598 . + . ID=gene2271;Name=SOPEG_RS11215;end_range=2207598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11215;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2207145 2207598 . + 0 ID=cds2236;Parent=gene2271;end_range=2207598,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2207623 2208069 . + . ID=gene2272;Name=SOPEG_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11220 NZ_CP006568.1 Protein Homology CDS 2207623 2208069 . + 0 ID=cds2237;Parent=gene2272;Dbxref=Genbank:WP_038470009.1;Name=WP_038470009.1;gbkey=CDS;product=transposase;protein_id=WP_038470009.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2208231 2208962 . + . ID=gene2273;Name=SOPEG_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11225 NZ_CP006568.1 Protein Homology CDS 2208231 2208962 . + 0 ID=cds2238;Parent=gene2273;Dbxref=Genbank:WP_025245404.1;Name=WP_025245404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245404.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2208946 2209343 . + . ID=gene2274;Name=SOPEG_RS11230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11230;pseudo=true NZ_CP006568.1 Protein Homology CDS 2208946 2209343 . + 0 ID=cds2239;Parent=gene2274;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2209343 2209836 . + . ID=gene2275;Name=SOPEG_RS11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11235;pseudo=true NZ_CP006568.1 Protein Homology CDS 2209343 2209836 . + 0 ID=cds2240;Parent=gene2275;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2209618 2213577 . + . ID=id327;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2209874 2210623 . - . ID=gene2276;Name=SOPEG_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11240;old_locus_tag=SOPEG_2106 NZ_CP006568.1 Protein Homology CDS 2209874 2210623 . - 0 ID=cds2241;Parent=gene2276;Dbxref=Genbank:WP_025245405.1;Name=WP_025245405.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245405.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2210635 2211120 . - . ID=gene2277;Name=SOPEG_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11245 NZ_CP006568.1 Protein Homology CDS 2210635 2211120 . - 0 ID=cds2242;Parent=gene2277;Dbxref=Genbank:WP_051419636.1;Name=WP_051419636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419636.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2211407 2212153 . - . ID=gene2278;Name=SOPEG_RS11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11250;partial=true;pseudo=true;start_range=.,2211407 NZ_CP006568.1 Protein Homology CDS 2211407 2212153 . - 0 ID=cds2243;Parent=gene2278;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2211407;transl_except=(pos:complement(2211683..2211685)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2212437 2213498 . - . ID=gene2279;Name=SOPEG_RS11255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11255;partial=true;pseudo=true;start_range=.,2212437 NZ_CP006568.1 Protein Homology CDS 2212437 2213498 . - 0 ID=cds2244;Parent=gene2279;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2212437;transl_table=11 NZ_CP006568.1 RefSeq gene 2213634 2213867 . - . ID=gene2280;Name=SOPEG_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11260 NZ_CP006568.1 GeneMarkS+ CDS 2213634 2213867 . - 0 ID=cds2245;Parent=gene2280;Dbxref=Genbank:WP_038468641.1;Name=WP_038468641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468641.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2213966 2214196 . - . ID=gene2281;Name=SOPEG_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11265 NZ_CP006568.1 GeneMarkS+ CDS 2213966 2214196 . - 0 ID=cds2246;Parent=gene2281;Dbxref=Genbank:WP_025245408.1;Name=WP_025245408.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245408.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2214415 2215478 . + . ID=id328;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2214495 2215418 . + . ID=gene2282;Name=SOPEG_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11270;old_locus_tag=SOPEG_2109 NZ_CP006568.1 Protein Homology CDS 2214495 2215418 . + 0 ID=cds2247;Parent=gene2282;Dbxref=Genbank:WP_025245409.1;Name=WP_025245409.1;gbkey=CDS;product=transposase;protein_id=WP_025245409.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2216146 2216247 . + . ID=id329;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2216252 2217781 . - . ID=gene2283;Name=SOPEG_RS11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11275;partial=true;pseudo=true;start_range=.,2216252 NZ_CP006568.1 Protein Homology CDS 2216252 2217781 . - 0 ID=cds2248;Parent=gene2283;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ribonucleoside-triphosphate reductase;pseudo=true;start_range=.,2216252;transl_table=11 NZ_CP006568.1 RefSeq gene 2218292 2219803 . - . ID=gene2284;Name=SOPEG_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11280;old_locus_tag=SOPEG_2111 NZ_CP006568.1 Protein Homology CDS 2218292 2219803 . - 0 ID=cds2249;Parent=gene2284;Dbxref=Genbank:WP_025245411.1;Name=WP_025245411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245411.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2219806 2220489 . - . ID=gene2285;Name=SOPEG_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11285;old_locus_tag=SOPEG_2112 NZ_CP006568.1 Protein Homology CDS 2219806 2220489 . - 0 ID=cds2250;Parent=gene2285;Dbxref=Genbank:WP_051419638.1;Name=WP_051419638.1;gbkey=CDS;product=restriction endonuclease;protein_id=WP_051419638.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2220882 2221268 . - . ID=gene2286;Name=SOPEG_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11290;old_locus_tag=SOPEG_2113 NZ_CP006568.1 Protein Homology CDS 2220882 2221268 . - 0 ID=cds2251;Parent=gene2286;Dbxref=Genbank:WP_025245413.1;Name=WP_025245413.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_025245413.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2221348 2221812 . - . ID=gene2287;Name=SOPEG_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11295;old_locus_tag=SOPEG_2114 NZ_CP006568.1 Protein Homology CDS 2221348 2221812 . - 0 ID=cds2252;Parent=gene2287;Dbxref=Genbank:WP_025245414.1;Name=WP_025245414.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_025245414.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2222144 2223040 . - . ID=gene2288;Name=SOPEG_RS11300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11300;partial=true;pseudo=true;start_range=.,2222144 NZ_CP006568.1 Protein Homology CDS 2222144 2223040 . - 0 ID=cds2253;Parent=gene2288;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=aspartate carbamoyltransferase catalytic subunit;pseudo=true;start_range=.,2222144;transl_table=11 NZ_CP006568.1 RefSeq gene 2223413 2223880 . + . ID=gene2289;Name=SOPEG_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11305;old_locus_tag=SOPEG_2116 NZ_CP006568.1 Protein Homology CDS 2223413 2223880 . + 0 ID=cds2254;Parent=gene2289;Dbxref=Genbank:WP_025245416.1;Name=WP_025245416.1;gbkey=CDS;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_025245416.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2224133 2225149 . - . ID=gene2290;Name=SOPEG_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11310;old_locus_tag=SOPEG_2117 NZ_CP006568.1 Protein Homology CDS 2224133 2225149 . - 0 ID=cds2255;Parent=gene2290;Dbxref=Genbank:WP_025245417.1;Name=WP_025245417.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_025245417.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2225322 2225762 . + . ID=gene2291;Name=SOPEG_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11315;old_locus_tag=SOPEG_2118 NZ_CP006568.1 Protein Homology CDS 2225322 2225762 . + 0 ID=cds2256;Parent=gene2291;Dbxref=Genbank:WP_025245418.1;Name=WP_025245418.1;gbkey=CDS;product=regulator;protein_id=WP_025245418.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2225824 2227145 . + . ID=id330;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2225861 2227054 . - . ID=gene2292;Name=SOPEG_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11320 NZ_CP006568.1 Protein Homology CDS 2225861 2227054 . - 0 ID=cds2257;Parent=gene2292;Dbxref=Genbank:WP_025245419.1;Name=WP_025245419.1;gbkey=CDS;product=transposase;protein_id=WP_025245419.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2227174 2227669 . - . ID=gene2293;Name=SOPEG_RS11325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11325;pseudo=true NZ_CP006568.1 Protein Homology CDS 2227174 2227669 . - 0 ID=cds2258;Parent=gene2293;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2227973 2230828 . - . ID=gene2294;Name=SOPEG_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11330;old_locus_tag=SOPEG_2121 NZ_CP006568.1 Protein Homology CDS 2227973 2230828 . - 0 ID=cds2259;Parent=gene2294;Dbxref=Genbank:WP_025245420.1;Name=WP_025245420.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_025245420.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2230842 2231291 . - . ID=gene2295;Name=SOPEG_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11335;old_locus_tag=SOPEG_2122 NZ_CP006568.1 Protein Homology CDS 2230842 2231291 . - 0 ID=cds2260;Parent=gene2295;Dbxref=Genbank:WP_025245421.1;Name=WP_025245421.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_025245421.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2231372 2232883 . - . ID=gene2296;Name=SOPEG_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11340;old_locus_tag=SOPEG_2123 NZ_CP006568.1 Protein Homology CDS 2231372 2232883 . - 0 ID=cds2261;Parent=gene2296;Dbxref=Genbank:WP_025245422.1;Name=WP_025245422.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=multifunctional aminopeptidase A;protein_id=WP_025245422.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2233163 2234263 . + . ID=gene2297;Name=SOPEG_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11345;old_locus_tag=SOPEG_2124 NZ_CP006568.1 Protein Homology CDS 2233163 2234263 . + 0 ID=cds2262;Parent=gene2297;Dbxref=Genbank:WP_025245423.1;Name=WP_025245423.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_025245423.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2234263 2235339 . + . ID=gene2298;Name=SOPEG_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11350 NZ_CP006568.1 Protein Homology CDS 2234263 2235339 . + 0 ID=cds2263;Parent=gene2298;Dbxref=Genbank:WP_025245424.1;Name=WP_025245424.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_025245424.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2235320 2235534 . + . ID=id331;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2235381 2235521 . - . ID=gene2299;Name=SOPEG_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11355 NZ_CP006568.1 Protein Homology CDS 2235381 2235521 . - 0 ID=cds2264;Parent=gene2299;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2235605 2235961 . - . ID=gene2300;Name=SOPEG_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11360 NZ_CP006568.1 Protein Homology CDS 2235605 2235961 . - 0 ID=cds2265;Parent=gene2300;Dbxref=Genbank:WP_025245426.1;Name=WP_025245426.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245426.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2236118 2236202 . - . ID=gene2301;Name=SOPEG_RS11365;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS11365;old_locus_tag=SOPEG_t2128 NZ_CP006568.1 tRNAscan-SE tRNA 2236118 2236202 . - . ID=rna35;Parent=gene2301;anticodon=(pos:complement(2236166..2236168));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 2236118 2236202 . - . ID=id332;Parent=rna35;anticodon=(pos:complement(2236166..2236168));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 2236473 2237264 . - . ID=gene2302;Name=SOPEG_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11370;old_locus_tag=SOPEG_2129 NZ_CP006568.1 Protein Homology CDS 2236473 2237264 . - 0 ID=cds2266;Parent=gene2302;Dbxref=Genbank:WP_025245427.1;Name=WP_025245427.1;Note=5-formyluracil/5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic/apyrimidinic lyase activity;gbkey=CDS;product=endonuclease VIII;protein_id=WP_025245427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2237759 2238289 . + . ID=gene2303;Name=SOPEG_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11375;old_locus_tag=SOPEG_2130 NZ_CP006568.1 Protein Homology CDS 2237759 2238289 . + 0 ID=cds2267;Parent=gene2303;Dbxref=Genbank:WP_025245428.1;Name=WP_025245428.1;gbkey=CDS;product=endopeptidase;protein_id=WP_025245428.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2238341 2238529 . + . ID=gene2304;Name=SOPEG_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11380 NZ_CP006568.1 GeneMarkS+ CDS 2238341 2238529 . + 0 ID=cds2268;Parent=gene2304;Dbxref=Genbank:WP_025245429.1;Name=WP_025245429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245429.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2238708 2239665 . - . ID=gene2305;Name=SOPEG_RS11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11385;pseudo=true NZ_CP006568.1 Protein Homology CDS 2238708 2239665 . - 0 ID=cds2269;Parent=gene2305;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2240272 2241327 . + . ID=id333;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2240352 2241173 . + . ID=gene2306;Name=SOPEG_RS22895;end_range=2241173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22895;old_locus_tag=SOPEG_ps2132;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2240352 2241173 . + 0 ID=cds2270;Parent=gene2306;end_range=2241173,.;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_except=(pos:2240457..2240459%2Caa:Other),(pos:2240760..2240762%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2241135 2241269 . + . ID=gene2307;Name=SOPEG_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11395 NZ_CP006568.1 Protein Homology CDS 2241135 2241269 . + 0 ID=cds2271;Parent=gene2307;Dbxref=Genbank:WP_051419985.1;Name=WP_051419985.1;gbkey=CDS;product=cytoplasmic protein;protein_id=WP_051419985.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2241621 2245418 . + . ID=id334;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2241699 2242433 . + . ID=gene2308;Name=SOPEG_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11400 NZ_CP006568.1 Protein Homology CDS 2241699 2242433 . + 0 ID=cds2272;Parent=gene2308;Dbxref=Genbank:WP_025245432.1;Name=WP_025245432.1;gbkey=CDS;product=transposase;protein_id=WP_025245432.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2242494 2242883 . + . ID=gene2309;Name=SOPEG_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11405 NZ_CP006568.1 Protein Homology CDS 2242494 2242883 . + 0 ID=cds2273;Parent=gene2309;Dbxref=Genbank:WP_025245433.1;Name=WP_025245433.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245433.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2242876 2243799 . - . ID=gene2310;Name=SOPEG_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11410;old_locus_tag=SOPEG_2136 NZ_CP006568.1 Protein Homology CDS 2242876 2243799 . - 0 ID=cds2274;Parent=gene2310;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2243873 2244115 . - . ID=gene2311;Name=SOPEG_RS11415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11415;partial=true;pseudo=true;start_range=.,2243873 NZ_CP006568.1 Protein Homology CDS 2243873 2244115 . - 0 ID=cds2275;Parent=gene2311;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=repressor;pseudo=true;start_range=.,2243873;transl_table=11 NZ_CP006568.1 RefSeq gene 2244172 2245380 . + . ID=gene2312;Name=SOPEG_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11420;old_locus_tag=SOPEG_2137 NZ_CP006568.1 Protein Homology CDS 2244172 2245380 . + 0 ID=cds2276;Parent=gene2312;Dbxref=Genbank:WP_025245435.1;Name=WP_025245435.1;gbkey=CDS;product=transposase;protein_id=WP_025245435.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2245434 2248961 . - . ID=gene2313;Name=SOPEG_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11425;old_locus_tag=SOPEG_2138 NZ_CP006568.1 Protein Homology CDS 2245434 2248961 . - 0 ID=cds2277;Parent=gene2313;Dbxref=Genbank:WP_025245436.1;Name=WP_025245436.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_025245436.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2249523 2250479 . + . ID=gene2314;Name=SOPEG_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11430;old_locus_tag=SOPEG_2139 NZ_CP006568.1 Protein Homology CDS 2249523 2250479 . + 0 ID=cds2278;Parent=gene2314;Dbxref=Genbank:WP_025245437.1;Name=WP_025245437.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase;protein_id=WP_025245437.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2250510 2251094 . - . ID=gene2315;Name=SOPEG_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11435;pseudo=true NZ_CP006568.1 Protein Homology CDS 2250510 2251094 . - 0 ID=cds2279;Parent=gene2315;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;pseudo=true;transl_except=(pos:complement(2250966..2250968)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2251237 2251758 . + . ID=gene2316;Name=SOPEG_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11440;old_locus_tag=SOPEG_2141 NZ_CP006568.1 Protein Homology CDS 2251237 2251758 . + 0 ID=cds2280;Parent=gene2316;Dbxref=Genbank:WP_025245438.1;Name=WP_025245438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245438.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2251775 2251945 . + . ID=gene2317;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SOPEG_RS11445;old_locus_tag=SOPEG_2142 NZ_CP006568.1 Protein Homology CDS 2251775 2251945 . + 0 ID=cds2281;Parent=gene2317;Dbxref=Genbank:WP_025245439.1;Name=WP_025245439.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_025245439.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2251992 2252996 . + . ID=gene2318;Name=SOPEG_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11450;old_locus_tag=SOPEG_2143 NZ_CP006568.1 Protein Homology CDS 2251992 2252996 . + 0 ID=cds2282;Parent=gene2318;Dbxref=Genbank:WP_038468646.1;Name=WP_038468646.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_038468646.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2253003 2253956 . + . ID=gene2319;Name=SOPEG_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11455;old_locus_tag=SOPEG_2144 NZ_CP006568.1 Protein Homology CDS 2253003 2253956 . + 0 ID=cds2283;Parent=gene2319;Dbxref=Genbank:WP_025245441.1;Name=WP_025245441.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_025245441.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2253975 2254904 . + . ID=gene2320;Name=SOPEG_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11460;old_locus_tag=SOPEG_2145 NZ_CP006568.1 Protein Homology CDS 2253975 2254904 . + 0 ID=cds2284;Parent=gene2320;Dbxref=Genbank:WP_025245442.1;Name=WP_025245442.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_025245442.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2254919 2255653 . + . ID=gene2321;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SOPEG_RS11465;old_locus_tag=SOPEG_2146 NZ_CP006568.1 Protein Homology CDS 2254919 2255653 . + 0 ID=cds2285;Parent=gene2321;Dbxref=Genbank:WP_025245443.1;Name=WP_025245443.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_025245443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2255808 2256044 . + . ID=gene2322;Name=SOPEG_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11470;old_locus_tag=SOPEG_2147 NZ_CP006568.1 Protein Homology CDS 2255808 2256044 . + 0 ID=cds2286;Parent=gene2322;Dbxref=Genbank:WP_011410921.1;Name=WP_011410921.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_011410921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2256125 2257366 . + . ID=gene2323;Name=SOPEG_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11475;old_locus_tag=SOPEG_2148 NZ_CP006568.1 Protein Homology CDS 2256125 2257366 . + 0 ID=cds2287;Parent=gene2323;Dbxref=Genbank:WP_025245444.1;Name=WP_025245444.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_025245444.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2257443 2258240 . + . ID=gene2324;Name=SOPEG_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11480;old_locus_tag=SOPEG_2149 NZ_CP006568.1 Protein Homology CDS 2257443 2258240 . + 0 ID=cds2288;Parent=gene2324;Dbxref=Genbank:WP_025245445.1;Name=WP_025245445.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_025245445.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2258326 2259351 . + . ID=gene2325;Name=SOPEG_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11485;old_locus_tag=SOPEG_2150 NZ_CP006568.1 Protein Homology CDS 2258326 2259351 . + 0 ID=cds2289;Parent=gene2325;Dbxref=Genbank:WP_025245446.1;Name=WP_025245446.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_025245446.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2259341 2259979 . + . ID=gene2326;Name=SOPEG_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11490;old_locus_tag=SOPEG_2151 NZ_CP006568.1 Protein Homology CDS 2259341 2259979 . + 0 ID=cds2290;Parent=gene2326;Dbxref=Genbank:WP_025245447.1;Name=WP_025245447.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_025245447.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2259976 2260971 . + . ID=gene2327;Name=SOPEG_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11495;old_locus_tag=SOPEG_2152 NZ_CP006568.1 Protein Homology CDS 2259976 2260971 . + 0 ID=cds2291;Parent=gene2327;Dbxref=Genbank:WP_025245448.1;Name=WP_025245448.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_025245448.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2260991 2261788 . + . ID=gene2328;Name=SOPEG_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11500;old_locus_tag=SOPEG_2153 NZ_CP006568.1 Protein Homology CDS 2260991 2261788 . + 0 ID=cds2292;Parent=gene2328;Dbxref=Genbank:WP_025245449.1;Name=WP_025245449.1;gbkey=CDS;product=DNAse;protein_id=WP_025245449.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2261770 2262117 . - . ID=gene2329;Name=SOPEG_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11505 NZ_CP006568.1 GeneMarkS+ CDS 2261770 2262117 . - 0 ID=cds2293;Parent=gene2329;Dbxref=Genbank:WP_025245450.1;Name=WP_025245450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245450.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2262116 2263552 . + . ID=gene2330;Name=SOPEG_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11510;old_locus_tag=SOPEG_2154 NZ_CP006568.1 Protein Homology CDS 2262116 2263552 . + 0 ID=cds2294;Parent=gene2330;Dbxref=Genbank:WP_025245451.1;Name=WP_025245451.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose subunit IIBC;protein_id=WP_025245451.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2263830 2264890 . + . ID=gene2331;Name=SOPEG_RS11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11515;pseudo=true NZ_CP006568.1 Protein Homology CDS 2263830 2264890 . + 0 ID=cds2295;Parent=gene2331;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage portal protein;pseudo=true;transl_except=(pos:2264232..2264234%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2264937 2265203 . + . ID=gene2332;Name=SOPEG_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11520;old_locus_tag=SOPEG_2156 NZ_CP006568.1 Protein Homology CDS 2264937 2265203 . + 0 ID=cds2296;Parent=gene2332;Dbxref=Genbank:WP_025245452.1;Name=WP_025245452.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245452.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2265236 2266162 . - . ID=gene2333;Name=SOPEG_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11525 NZ_CP006568.1 Protein Homology CDS 2265236 2266162 . - 0 ID=cds2297;Parent=gene2333;Dbxref=Genbank:WP_051419640.1;Name=WP_051419640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419640.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2266252 2266695 . - . ID=gene2334;Name=SOPEG_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22900;old_locus_tag=SOPEG_ps2158 NZ_CP006568.1 GeneMarkS+ CDS 2266252 2266695 . - 0 ID=cds2298;Parent=gene2334;Dbxref=Genbank:WP_025245454.1;Name=WP_025245454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245454.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2266758 2268889 . + . ID=id335;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2266841 2267035 . + . ID=gene2335;Name=SOPEG_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11530 NZ_CP006568.1 Protein Homology CDS 2266841 2267035 . + 0 ID=cds2299;Parent=gene2335;Dbxref=Genbank:WP_025245455.1;Name=WP_025245455.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245455.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2267100 2268023 . + . ID=gene2336;Name=SOPEG_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11535;old_locus_tag=SOPEG_2160 NZ_CP006568.1 Protein Homology CDS 2267100 2268023 . + 0 ID=cds2300;Parent=gene2336;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2268085 2268303 . + . ID=gene2337;Name=SOPEG_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11540 NZ_CP006568.1 Protein Homology CDS 2268085 2268303 . + 0 ID=cds2301;Parent=gene2337;Dbxref=Genbank:WP_038468655.1;Name=WP_038468655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468655.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2268382 2268828 . + . ID=gene2338;Name=SOPEG_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11545 NZ_CP006568.1 Protein Homology CDS 2268382 2268828 . + 0 ID=cds2302;Parent=gene2338;Dbxref=Genbank:WP_038470034.1;Name=WP_038470034.1;gbkey=CDS;product=transposase;protein_id=WP_038470034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2268874 2270427 . - . ID=gene2339;Name=SOPEG_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11550 NZ_CP006568.1 Protein Homology CDS 2268874 2270427 . - 0 ID=cds2303;Parent=gene2339;Dbxref=Genbank:WP_051419646.1;Name=WP_051419646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419646.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2268892 2270919 . + . ID=id336;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2270499 2270732 . - . ID=gene2340;Name=SOPEG_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11555 NZ_CP006568.1 GeneMarkS+ CDS 2270499 2270732 . - 0 ID=cds2304;Parent=gene2340;Dbxref=Genbank:WP_025245457.1;Name=WP_025245457.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245457.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2270734 2271620 . - . ID=gene2341;Name=SOPEG_RS11560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11560;pseudo=true NZ_CP006568.1 Protein Homology CDS 2270734 2271620 . - 0 ID=cds2305;Parent=gene2341;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2271553 2271697 . + . ID=id337;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2271631 2272200 . - . ID=gene2342;Name=SOPEG_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11565;old_locus_tag=SOPEG_2164 NZ_CP006568.1 Protein Homology CDS 2271631 2272200 . - 0 ID=cds2306;Parent=gene2342;Dbxref=Genbank:WP_025245458.1;Name=WP_025245458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245458.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2272197 2272457 . - . ID=gene2343;Name=SOPEG_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11570 NZ_CP006568.1 Protein Homology CDS 2272197 2272457 . - 0 ID=cds2307;Parent=gene2343;Dbxref=Genbank:WP_025245459.1;Name=WP_025245459.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245459.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2272539 2272751 . - . ID=gene2344;Name=SOPEG_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11575 NZ_CP006568.1 GeneMarkS+ CDS 2272539 2272751 . - 0 ID=cds2308;Parent=gene2344;Dbxref=Genbank:WP_025245460.1;Name=WP_025245460.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245460.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2273055 2273240 . - . ID=gene2345;Name=SOPEG_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11580 NZ_CP006568.1 GeneMarkS+ CDS 2273055 2273240 . - 0 ID=cds2309;Parent=gene2345;Dbxref=Genbank:WP_038468658.1;Name=WP_038468658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468658.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2273314 2273538 . - . ID=gene2346;Name=SOPEG_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11585 NZ_CP006568.1 Protein Homology CDS 2273314 2273538 . - 0 ID=cds2310;Parent=gene2346;Dbxref=Genbank:WP_025245462.1;Name=WP_025245462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245462.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2273655 2275947 . + . ID=id338;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2273733 2274080 . + . ID=gene2347;Name=SOPEG_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11590 NZ_CP006568.1 Protein Homology CDS 2273733 2274080 . + 0 ID=cds2311;Parent=gene2347;Dbxref=Genbank:WP_025245463.1;Name=WP_025245463.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245463.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2274431 2274613 . + . ID=gene2348;Name=SOPEG_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11595 NZ_CP006568.1 Protein Homology CDS 2274431 2274613 . + 0 ID=cds2312;Parent=gene2348;Dbxref=Genbank:WP_025245464.1;Name=WP_025245464.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245464.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2274654 2275862 . + . ID=gene2349;Name=SOPEG_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11600;old_locus_tag=SOPEG_2167 NZ_CP006568.1 Protein Homology CDS 2274654 2275862 . + 0 ID=cds2313;Parent=gene2349;Dbxref=Genbank:WP_025245465.1;Name=WP_025245465.1;gbkey=CDS;product=transposase;protein_id=WP_025245465.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2276985 2277164 . - . ID=gene2350;Name=SOPEG_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11605;old_locus_tag=SOPEG_2169 NZ_CP006568.1 Protein Homology CDS 2276985 2277164 . - 0 ID=cds2314;Parent=gene2350;Dbxref=Genbank:WP_025245467.1;Name=WP_025245467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245467.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2277338 2278798 . + . ID=gene2351;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SOPEG_RS11610;old_locus_tag=SOPEG_2170 NZ_CP006568.1 Protein Homology CDS 2277338 2278798 . + 0 ID=cds2315;Parent=gene2351;Dbxref=Genbank:WP_025245468.1;Name=WP_025245468.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_025245468.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2278853 2279176 . + . ID=gene2352;Name=SOPEG_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11615;old_locus_tag=SOPEG_2171 NZ_CP006568.1 Protein Homology CDS 2278853 2279176 . + 0 ID=cds2316;Parent=gene2352;Dbxref=Genbank:WP_038470043.1;Name=WP_038470043.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_038470043.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2279306 2280321 . - . ID=gene2353;Name=SOPEG_RS11620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11620;pseudo=true NZ_CP006568.1 Protein Homology CDS 2279306 2280321 . - 0 ID=cds2317;Parent=gene2353;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2280318 2281311 . - . ID=gene2354;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=pseudogene;locus_tag=SOPEG_RS11625;pseudo=true NZ_CP006568.1 Protein Homology CDS 2280318 2281311 . - 0 ID=cds2318;Parent=gene2354;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=oppD;product=oligopeptide transporter ATP-binding component;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2281356 2282254 . - . ID=gene2355;Name=SOPEG_RS11630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11630;pseudo=true NZ_CP006568.1 Protein Homology CDS 2281356 2282254 . - 0 ID=cds2319;Parent=gene2355;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter permease;pseudo=true;transl_except=(pos:complement(2282204..2282206)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2282270 2282950 . - . ID=gene2356;Name=oppB;end_range=2282950,.;gbkey=Gene;gene=oppB;gene_biotype=pseudogene;locus_tag=SOPEG_RS11635;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2282270 2282950 . - 0 ID=cds2320;Parent=gene2356;end_range=2282950,.;exception=unextendable partial coding region;gbkey=CDS;gene=oppB;partial=true;product=oligopeptide transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2282950 2284012 . + . ID=id339;gbkey=repeat_region;gene=oppB NZ_CP006568.1 RefSeq gene 2283027 2283950 . + . ID=gene2357;Name=SOPEG_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11640;old_locus_tag=SOPEG_2176 NZ_CP006568.1 Protein Homology CDS 2283027 2283950 . + 0 ID=cds2321;Parent=gene2357;Dbxref=Genbank:WP_038468663.1;Name=WP_038468663.1;gbkey=CDS;product=transposase;protein_id=WP_038468663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2283943 2284254 . - . ID=gene2358;Name=SOPEG_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11645 NZ_CP006568.1 Protein Homology CDS 2283943 2284254 . - 0 ID=cds2322;Parent=gene2358;Dbxref=Genbank:WP_025245471.1;Name=WP_025245471.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025245471.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2284353 2285141 . - . ID=gene2359;Name=SOPEG_RS11650;end_range=2285141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11650;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2284353 2285141 . - 0 ID=cds2323;Parent=gene2359;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;end_range=2285141,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2285111 2298639 . + . ID=id340;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2285730 2286714 . + . ID=gene2360;Name=SOPEG_RS11655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11655;pseudo=true NZ_CP006568.1 Protein Homology CDS 2285730 2286714 . + 0 ID=cds2324;Parent=gene2360;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2286768 2287068 . - . ID=gene2361;Name=SOPEG_RS11660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11660;pseudo=true NZ_CP006568.1 Protein Homology CDS 2286768 2287068 . - 0 ID=cds2325;Parent=gene2361;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2287455 2288075 . + . ID=gene2362;Name=SOPEG_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11665 NZ_CP006568.1 Protein Homology CDS 2287455 2288075 . + 0 ID=cds2326;Parent=gene2362;Dbxref=Genbank:WP_025245474.1;Name=WP_025245474.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245474.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2288072 2288350 . + . ID=gene2363;Name=SOPEG_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11670;old_locus_tag=SOPEG_2181 NZ_CP006568.1 Protein Homology CDS 2288072 2288350 . + 0 ID=cds2327;Parent=gene2363;Dbxref=Genbank:WP_025245475.1;Name=WP_025245475.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025245475.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2288482 2289234 . + . ID=gene2364;Name=SOPEG_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11675;old_locus_tag=SOPEG_2182 NZ_CP006568.1 Protein Homology CDS 2288482 2289234 . + 0 ID=cds2328;Parent=gene2364;Dbxref=Genbank:WP_025245476.1;Name=WP_025245476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245476.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2289246 2289890 . + . ID=gene2365;Name=SOPEG_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11680;old_locus_tag=SOPEG_2183 NZ_CP006568.1 Protein Homology CDS 2289246 2289890 . + 0 ID=cds2329;Parent=gene2365;Dbxref=Genbank:WP_038468666.1;Name=WP_038468666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468666.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2290002 2290268 . - . ID=gene2366;Name=SOPEG_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11685 NZ_CP006568.1 GeneMarkS+ CDS 2290002 2290268 . - 0 ID=cds2330;Parent=gene2366;Dbxref=Genbank:WP_025245477.1;Name=WP_025245477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245477.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2290267 2290518 . + . ID=gene2367;Name=SOPEG_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11690 NZ_CP006568.1 GeneMarkS+ CDS 2290267 2290518 . + 0 ID=cds2331;Parent=gene2367;Dbxref=Genbank:WP_025245478.1;Name=WP_025245478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245478.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2291209 2291658 . + . ID=gene2368;Name=SOPEG_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11695 NZ_CP006568.1 Protein Homology CDS 2291209 2291658 . + 0 ID=cds2332;Parent=gene2368;Dbxref=Genbank:WP_051419648.1;Name=WP_051419648.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419648.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2291723 2292508 . + . ID=gene2369;Name=SOPEG_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11700 NZ_CP006568.1 Protein Homology CDS 2291723 2292508 . + 0 ID=cds2333;Parent=gene2369;Dbxref=Genbank:WP_025245480.1;Name=WP_025245480.1;gbkey=CDS;product=transposase;protein_id=WP_025245480.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2292501 2293424 . - . ID=gene2370;Name=SOPEG_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11705;old_locus_tag=SOPEG_2188 NZ_CP006568.1 Protein Homology CDS 2292501 2293424 . - 0 ID=cds2334;Parent=gene2370;Dbxref=Genbank:WP_025243939.1;Name=WP_025243939.1;gbkey=CDS;product=transposase;protein_id=WP_025243939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2293570 2293710 . + . ID=gene2371;Name=SOPEG_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11710 NZ_CP006568.1 Protein Homology CDS 2293570 2293710 . + 0 ID=cds2335;Parent=gene2371;Dbxref=Genbank:WP_038468670.1;Name=WP_038468670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468670.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2293981 2296023 . + . ID=gene2372;Name=SOPEG_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11715;old_locus_tag=SOPEG_2189 NZ_CP006568.1 Protein Homology CDS 2293981 2296023 . + 0 ID=cds2336;Parent=gene2372;Dbxref=Genbank:WP_025245481.1;Name=WP_025245481.1;gbkey=CDS;product=transposase;protein_id=WP_025245481.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2296035 2296988 . + . ID=gene2373;Name=SOPEG_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11720 NZ_CP006568.1 Protein Homology CDS 2296035 2296988 . + 0 ID=cds2337;Parent=gene2373;Dbxref=Genbank:WP_025245482.1;Name=WP_025245482.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025245482.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2296941 2298176 . - . ID=gene2374;Name=SOPEG_RS11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11725;pseudo=true NZ_CP006568.1 Protein Homology CDS 2296941 2298176 . - 0 ID=cds2338;Parent=gene2374;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2297790..2297792)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2299004 2299783 . + . ID=gene2375;Name=SOPEG_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22905;old_locus_tag=SOPEG_2194 NZ_CP006568.1 Protein Homology CDS 2299004 2299783 . + 0 ID=cds2339;Parent=gene2375;Dbxref=Genbank:WP_025245484.1;Name=WP_025245484.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245484.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2299780 2300412 . + . ID=gene2376;Name=SOPEG_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11740;old_locus_tag=SOPEG_2195 NZ_CP006568.1 Protein Homology CDS 2299780 2300412 . + 0 ID=cds2340;Parent=gene2376;Dbxref=Genbank:WP_025245485.1;Name=WP_025245485.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245485.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2300746 2301075 . + . ID=gene2377;Name=SOPEG_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11745 NZ_CP006568.1 Protein Homology CDS 2300746 2301075 . + 0 ID=cds2341;Parent=gene2377;Dbxref=Genbank:WP_051420004.1;Name=WP_051420004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420004.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2301072 2301998 . + . ID=gene2378;Name=SOPEG_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11750;old_locus_tag=SOPEG_2197 NZ_CP006568.1 Protein Homology CDS 2301072 2301998 . + 0 ID=cds2342;Parent=gene2378;Dbxref=Genbank:WP_025245487.1;Name=WP_025245487.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245487.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2302130 2303453 . + . ID=id341;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2302168 2302614 . - . ID=gene2379;Name=SOPEG_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11755 NZ_CP006568.1 Protein Homology CDS 2302168 2302614 . - 0 ID=cds2343;Parent=gene2379;Dbxref=Genbank:WP_038468673.1;Name=WP_038468673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468673.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2302746 2303378 . - . ID=gene2380;Name=SOPEG_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11760 NZ_CP006568.1 Protein Homology CDS 2302746 2303378 . - 0 ID=cds2344;Parent=gene2380;Dbxref=Genbank:WP_025245489.1;Name=WP_025245489.1;gbkey=CDS;product=transposase;protein_id=WP_025245489.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2303508 2307166 . + . ID=id342;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2303546 2303887 . - . ID=gene2381;Name=SOPEG_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11765 NZ_CP006568.1 Protein Homology CDS 2303546 2303887 . - 0 ID=cds2345;Parent=gene2381;Dbxref=Genbank:WP_025245490.1;Name=WP_025245490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245490.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2303833 2304450 . - . ID=gene2382;Name=SOPEG_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11770 NZ_CP006568.1 Protein Homology CDS 2303833 2304450 . - 0 ID=cds2346;Parent=gene2382;Dbxref=Genbank:WP_038468676.1;Name=WP_038468676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468676.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2304764 2306281 . + . ID=gene2383;Name=SOPEG_RS11775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11775;pseudo=true NZ_CP006568.1 Protein Homology CDS 2304764 2306281 . + 0 ID=cds2347;Parent=gene2383;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:2305127..2305129%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2306293 2306760 . + . ID=gene2384;Name=SOPEG_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22910 NZ_CP006568.1 Protein Homology CDS 2306293 2306760 . + 0 ID=cds2348;Parent=gene2384;Dbxref=Genbank:WP_051419650.1;Name=WP_051419650.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_051419650.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2306818 2307042 . + . ID=gene2385;Name=SOPEG_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22915 NZ_CP006568.1 Protein Homology CDS 2306818 2307042 . + 0 ID=cds2349;Parent=gene2385;Dbxref=Genbank:WP_051419507.1;Name=WP_051419507.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419507.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2307039 2307224 . - . ID=gene2386;Name=SOPEG_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11785 NZ_CP006568.1 GeneMarkS+ CDS 2307039 2307224 . - 0 ID=cds2350;Parent=gene2386;Dbxref=Genbank:WP_025245492.1;Name=WP_025245492.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245492.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2307307 2307751 . - . ID=gene2387;Name=SOPEG_RS11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11790;pseudo=true NZ_CP006568.1 Protein Homology CDS 2307307 2307751 . - 0 ID=cds2351;Parent=gene2387;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2307352 2307484 . + . ID=id343;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2307751 2308146 . - . ID=gene2388;Name=SOPEG_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11795;old_locus_tag=SOPEG_2202 NZ_CP006568.1 Protein Homology CDS 2307751 2308146 . - 0 ID=cds2352;Parent=gene2388;Dbxref=Genbank:WP_051420005.1;Name=WP_051420005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420005.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2308339 2308860 . - . ID=gene2389;Name=SOPEG_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11800 NZ_CP006568.1 Protein Homology CDS 2308339 2308860 . - 0 ID=cds2353;Parent=gene2389;Dbxref=Genbank:WP_051419652.1;Name=WP_051419652.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419652.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2308993 2311143 . + . ID=id344;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2309232 2309987 . + . ID=gene2390;Name=SOPEG_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11805 NZ_CP006568.1 Protein Homology CDS 2309232 2309987 . + 0 ID=cds2354;Parent=gene2390;Dbxref=Genbank:WP_038468680.1;Name=WP_038468680.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468680.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2310122 2311105 . + . ID=gene2391;Name=SOPEG_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11810 NZ_CP006568.1 Protein Homology CDS 2310122 2311105 . + 0 ID=cds2355;Parent=gene2391;Dbxref=Genbank:WP_038468683.1;Name=WP_038468683.1;gbkey=CDS;product=transposase;protein_id=WP_038468683.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2311340 2312413 . + . ID=id345;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2311423 2312346 . + . ID=gene2392;Name=SOPEG_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11815;old_locus_tag=SOPEG_2206 NZ_CP006568.1 Protein Homology CDS 2311423 2312346 . + 0 ID=cds2356;Parent=gene2392;Dbxref=Genbank:WP_025245496.1;Name=WP_025245496.1;gbkey=CDS;product=transposase;protein_id=WP_025245496.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2313048 2313458 . + . ID=gene2393;Name=SOPEG_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22920;old_locus_tag=SOPEG_2207 NZ_CP006568.1 Protein Homology CDS 2313048 2313458 . + 0 ID=cds2357;Parent=gene2393;Dbxref=Genbank:WP_025245497.1;Name=WP_025245497.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245497.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2313156 2313524 . + . ID=id346;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2313723 2314070 . + . ID=gene2394;Name=SOPEG_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11825;old_locus_tag=SOPEG_2208 NZ_CP006568.1 Protein Homology CDS 2313723 2314070 . + 0 ID=cds2358;Parent=gene2394;Dbxref=Genbank:WP_025245498.1;Name=WP_025245498.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_025245498.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2314087 2314464 . + . ID=gene2395;Name=SOPEG_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11830;old_locus_tag=SOPEG_2209 NZ_CP006568.1 Protein Homology CDS 2314087 2314464 . + 0 ID=cds2359;Parent=gene2395;Dbxref=Genbank:WP_025245499.1;Name=WP_025245499.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245499.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2314486 2315070 . + . ID=gene2396;Name=SOPEG_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11835;old_locus_tag=SOPEG_2210 NZ_CP006568.1 Protein Homology CDS 2314486 2315070 . + 0 ID=cds2360;Parent=gene2396;Dbxref=Genbank:WP_025245500.1;Name=WP_025245500.1;gbkey=CDS;product=penicillin-binding protein;protein_id=WP_025245500.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2315087 2315320 . + . ID=gene2397;Name=SOPEG_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22925 NZ_CP006568.1 Protein Homology CDS 2315087 2315320 . + 0 ID=cds2361;Parent=gene2397;Dbxref=Genbank:WP_051419654.1;Name=WP_051419654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419654.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2315327 2315680 . + . ID=gene2398;Name=SOPEG_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22930 NZ_CP006568.1 GeneMarkS+ CDS 2315327 2315680 . + 0 ID=cds2362;Parent=gene2398;Dbxref=Genbank:WP_051419656.1;Name=WP_051419656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419656.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2315554 2318161 . + . ID=id347;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2315677 2316426 . - . ID=gene2399;Name=SOPEG_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11845;old_locus_tag=SOPEG_2212 NZ_CP006568.1 Protein Homology CDS 2315677 2316426 . - 0 ID=cds2363;Parent=gene2399;Dbxref=Genbank:WP_025245503.1;Name=WP_025245503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245503.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2316610 2317956 . - . ID=gene2400;Name=SOPEG_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11850 NZ_CP006568.1 Protein Homology CDS 2316610 2317956 . - 0 ID=cds2364;Parent=gene2400;Dbxref=Genbank:WP_051419658.1;Name=WP_051419658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419658.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2318183 2318395 . + . ID=gene2401;Name=SOPEG_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11855 NZ_CP006568.1 GeneMarkS+ CDS 2318183 2318395 . + 0 ID=cds2365;Parent=gene2401;Dbxref=Genbank:WP_025245504.1;Name=WP_025245504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245504.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2318477 2318737 . + . ID=gene2402;Name=SOPEG_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11860 NZ_CP006568.1 Protein Homology CDS 2318477 2318737 . + 0 ID=cds2366;Parent=gene2402;Dbxref=Genbank:WP_038468687.1;Name=WP_038468687.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468687.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2318734 2319021 . + . ID=gene2403;Name=SOPEG_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22935 NZ_CP006568.1 Protein Homology CDS 2318734 2319021 . + 0 ID=cds2367;Parent=gene2403;Dbxref=Genbank:WP_051419660.1;Name=WP_051419660.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419660.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2319071 2319304 . + . ID=gene2404;Name=SOPEG_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22940 NZ_CP006568.1 Protein Homology CDS 2319071 2319304 . + 0 ID=cds2368;Parent=gene2404;Dbxref=Genbank:WP_051419661.1;Name=WP_051419661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419661.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2319315 2320184 . + . ID=gene2405;Name=SOPEG_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11870 NZ_CP006568.1 Protein Homology CDS 2319315 2320184 . + 0 ID=cds2369;Parent=gene2405;Dbxref=Genbank:WP_025245506.1;Name=WP_025245506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245506.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2320186 2320848 . + . ID=gene2406;Name=SOPEG_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22945 NZ_CP006568.1 GeneMarkS+ CDS 2320186 2320848 . + 0 ID=cds2370;Parent=gene2406;Dbxref=Genbank:WP_051419663.1;Name=WP_051419663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2320899 2321348 . + . ID=gene2407;Name=SOPEG_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22950 NZ_CP006568.1 Protein Homology CDS 2320899 2321348 . + 0 ID=cds2371;Parent=gene2407;Dbxref=Genbank:WP_025245508.1;Name=WP_025245508.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245508.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2321313 2322382 . + . ID=id348;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2321396 2322319 . + . ID=gene2408;Name=SOPEG_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11880;old_locus_tag=SOPEG_2217 NZ_CP006568.1 Protein Homology CDS 2321396 2322319 . + 0 ID=cds2372;Parent=gene2408;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2322386 2323087 . + . ID=id349;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2322449 2323417 . + . ID=gene2409;Name=SOPEG_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11885 NZ_CP006568.1 Protein Homology CDS 2322449 2323417 . + 0 ID=cds2373;Parent=gene2409;Dbxref=Genbank:WP_051419665.1;Name=WP_051419665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419665.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2323495 2323818 . + . ID=gene2410;Name=SOPEG_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11890;old_locus_tag=SOPEG_2218 NZ_CP006568.1 Protein Homology CDS 2323495 2323818 . + 0 ID=cds2374;Parent=gene2410;Dbxref=Genbank:WP_038470086.1;Name=WP_038470086.1;gbkey=CDS;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_038470086.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2323811 2324023 . + . ID=gene2411;Name=SOPEG_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11895;old_locus_tag=SOPEG_2219 NZ_CP006568.1 Protein Homology CDS 2323811 2324023 . + 0 ID=cds2375;Parent=gene2411;Dbxref=Genbank:WP_025245510.1;Name=WP_025245510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245510.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2324096 2324447 . - . ID=gene2412;Name=SOPEG_RS11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11900;pseudo=true NZ_CP006568.1 Protein Homology CDS 2324096 2324447 . - 0 ID=cds2376;Parent=gene2412;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2324605 2325512 . + . ID=gene2413;Name=SOPEG_RS11905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11905;pseudo=true NZ_CP006568.1 Protein Homology CDS 2324605 2325512 . + 0 ID=cds2377;Parent=gene2413;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2325368..2325370%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2325514 2325729 . - . ID=gene2414;Name=SOPEG_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11910 NZ_CP006568.1 Protein Homology CDS 2325514 2325729 . - 0 ID=cds2378;Parent=gene2414;Dbxref=Genbank:WP_025245511.1;Name=WP_025245511.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245511.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2325807 2326235 . - . ID=gene2415;Name=SOPEG_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11915 NZ_CP006568.1 Protein Homology CDS 2325807 2326235 . - 0 ID=cds2379;Parent=gene2415;Dbxref=Genbank:WP_025245512.1;Name=WP_025245512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245512.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2326421 2326582 . - . ID=gene2416;Name=SOPEG_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11920 NZ_CP006568.1 Protein Homology CDS 2326421 2326582 . - 0 ID=cds2380;Parent=gene2416;Dbxref=Genbank:WP_038468689.1;Name=WP_038468689.1;gbkey=CDS;product=phage capsid portal protein;protein_id=WP_038468689.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2326513 2327464 . - . ID=gene2417;Name=SOPEG_RS11925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11925;pseudo=true NZ_CP006568.1 Protein Homology CDS 2326513 2327464 . - 0 ID=cds2381;Parent=gene2417;Note=gpQ%3B Q protein%3B structural capsid protein%3B bacteriophage P2-like virions include a head and a tail%3B Q is a connector or portal protein that joins phage head and tail%3B Q%2C P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids;exception=annotated by transcript or proteomic data;gbkey=CDS;product=portal vertex protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2327464 2328763 . - . ID=gene2418;Name=SOPEG_RS11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11930;pseudo=true NZ_CP006568.1 Protein Homology CDS 2327464 2328763 . - 0 ID=cds2382;Parent=gene2418;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2328809 2329209 . - . ID=gene2419;Name=SOPEG_RS11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11935;pseudo=true NZ_CP006568.1 Protein Homology CDS 2328809 2329209 . - 0 ID=cds2383;Parent=gene2419;exception=annotated by transcript or proteomic data;gbkey=CDS;product=terminase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2329372 2330208 . + . ID=gene2420;Name=SOPEG_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11940;old_locus_tag=SOPEG_2223 NZ_CP006568.1 Protein Homology CDS 2329372 2330208 . + 0 ID=cds2384;Parent=gene2420;Dbxref=Genbank:WP_025245513.1;Name=WP_025245513.1;gbkey=CDS;product=phage capsid scaffolding protein;protein_id=WP_025245513.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2330231 2331343 . + . ID=gene2421;Name=SOPEG_RS11945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11945;pseudo=true NZ_CP006568.1 Protein Homology CDS 2330231 2331343 . + 0 ID=cds2385;Parent=gene2421;gbkey=CDS;product=capsid protein;pseudo=true;transl_except=(pos:2330909..2330911%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2331404 2332048 . + . ID=gene2422;Name=SOPEG_RS11950;end_range=2332048,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11950;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2331404 2332048 . + 0 ID=cds2386;Parent=gene2422;end_range=2332048,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=terminase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2332576 2332776 . + . ID=gene2423;Name=SOPEG_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11955;old_locus_tag=SOPEG_2226 NZ_CP006568.1 Protein Homology CDS 2332576 2332776 . + 0 ID=cds2387;Parent=gene2423;Dbxref=Genbank:WP_025245515.1;Name=WP_025245515.1;gbkey=CDS;product=tail protein;protein_id=WP_025245515.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2332767 2333069 . + . ID=gene2424;Name=SOPEG_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11960;old_locus_tag=SOPEG_2227 NZ_CP006568.1 Protein Homology CDS 2332767 2333069 . + 0 ID=cds2388;Parent=gene2424;Dbxref=Genbank:WP_025245516.1;Name=WP_025245516.1;gbkey=CDS;product=phage tail protein;protein_id=WP_025245516.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2333053 2333598 . + . ID=gene2425;Name=SOPEG_RS11965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11965;pseudo=true NZ_CP006568.1 Protein Homology CDS 2333053 2333598 . + 0 ID=cds2389;Parent=gene2425;gbkey=CDS;product=lysozyme;pseudo=true;transl_except=(pos:2333449..2333451%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2333595 2334062 . + . ID=gene2426;Name=SOPEG_RS11970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11970;pseudo=true NZ_CP006568.1 Protein Homology CDS 2333595 2334062 . + 0 ID=cds2390;Parent=gene2426;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2333766..2333768%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2334173 2334637 . + . ID=gene2427;Name=SOPEG_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11975;old_locus_tag=SOPEG_2230 NZ_CP006568.1 Protein Homology CDS 2334173 2334637 . + 0 ID=cds2391;Parent=gene2427;Dbxref=Genbank:WP_025245518.1;Name=WP_025245518.1;gbkey=CDS;product=tail protein;protein_id=WP_025245518.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2334634 2335272 . + . ID=gene2428;Name=SOPEG_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11980;old_locus_tag=SOPEG_2231 NZ_CP006568.1 Protein Homology CDS 2334634 2335272 . + 0 ID=cds2392;Parent=gene2428;Dbxref=Genbank:WP_025245519.1;Name=WP_025245519.1;gbkey=CDS;product=tail protein;protein_id=WP_025245519.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2335269 2335849 . + . ID=gene2429;Name=SOPEG_RS11985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS11985;pseudo=true NZ_CP006568.1 Protein Homology CDS 2335269 2335849 . + 0 ID=cds2393;Parent=gene2429;exception=annotated by transcript or proteomic data;gbkey=CDS;product=baseplate assembly protein;pseudo=true;transl_except=(pos:2335464..2335466%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2335846 2336214 . + . ID=gene2430;Name=SOPEG_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11990;old_locus_tag=SOPEG_2233 NZ_CP006568.1 Protein Homology CDS 2335846 2336214 . + 0 ID=cds2394;Parent=gene2430;Dbxref=Genbank:WP_025245520.1;Name=WP_025245520.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_025245520.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2336201 2337100 . + . ID=gene2431;Name=SOPEG_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS11995;old_locus_tag=SOPEG_2234 NZ_CP006568.1 Protein Homology CDS 2336201 2337100 . + 0 ID=cds2395;Parent=gene2431;Dbxref=Genbank:WP_025245521.1;Name=WP_025245521.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_025245521.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2337093 2337707 . + . ID=gene2432;Name=SOPEG_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12000;old_locus_tag=SOPEG_2235 NZ_CP006568.1 Protein Homology CDS 2337093 2337707 . + 0 ID=cds2396;Parent=gene2432;Dbxref=Genbank:WP_025245522.1;Name=WP_025245522.1;gbkey=CDS;product=tail protein;protein_id=WP_025245522.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2337704 2338123 . + . ID=gene2433;Name=SOPEG_RS12005;end_range=2338123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12005;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2337704 2338123 . + 0 ID=cds2397;Parent=gene2433;end_range=2338123,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2338109 2339792 . + . ID=id350;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2338514 2339206 . + . ID=gene2434;Name=SOPEG_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12010 NZ_CP006568.1 GeneMarkS+ CDS 2338514 2339206 . + 0 ID=cds2398;Parent=gene2434;Dbxref=Genbank:WP_025245524.1;Name=WP_025245524.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245524.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2339369 2340295 . + . ID=gene2435;Name=SOPEG_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22955;old_locus_tag=SOPEG_ps2238 NZ_CP006568.1 Protein Homology CDS 2339369 2340295 . + 0 ID=cds2399;Parent=gene2435;Dbxref=Genbank:WP_025245525.1;Name=WP_025245525.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245525.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2339905 2347413 . + . ID=id351;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2340366 2341403 . + . ID=gene2436;Name=SOPEG_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12020 NZ_CP006568.1 Protein Homology CDS 2340366 2341403 . + 0 ID=cds2400;Parent=gene2436;Dbxref=Genbank:WP_025245526.1;Name=WP_025245526.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245526.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2341585 2342253 . - . ID=gene2437;Name=SOPEG_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12025 NZ_CP006568.1 Protein Homology CDS 2341585 2342253 . - 0 ID=cds2401;Parent=gene2437;Dbxref=Genbank:WP_038468693.1;Name=WP_038468693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468693.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2342527 2343735 . + . ID=gene2438;Name=SOPEG_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12030;old_locus_tag=SOPEG_2241 NZ_CP006568.1 Protein Homology CDS 2342527 2343735 . + 0 ID=cds2402;Parent=gene2438;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2344212 2344583 . - . ID=gene2439;Name=SOPEG_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12035 NZ_CP006568.1 GeneMarkS+ CDS 2344212 2344583 . - 0 ID=cds2403;Parent=gene2439;Dbxref=Genbank:WP_038468696.1;Name=WP_038468696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468696.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2344669 2345592 . - . ID=gene2440;Name=SOPEG_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12040;old_locus_tag=SOPEG_2243 NZ_CP006568.1 Protein Homology CDS 2344669 2345592 . - 0 ID=cds2404;Parent=gene2440;Dbxref=Genbank:WP_025245530.1;Name=WP_025245530.1;gbkey=CDS;product=transposase;protein_id=WP_025245530.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2346479 2350032 . - . ID=gene2441;Name=SOPEG_RS12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12045;pseudo=true NZ_CP006568.1 Protein Homology CDS 2346479 2350032 . - 0 ID=cds2405;Parent=gene2441;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;pseudo=true;transl_except=(pos:complement(2346782..2346784)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2347495 2351821 . + . ID=id352;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2350301 2350480 . + . ID=gene2442;Name=SOPEG_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12050 NZ_CP006568.1 GeneMarkS+ CDS 2350301 2350480 . + 0 ID=cds2406;Parent=gene2442;Dbxref=Genbank:WP_038468698.1;Name=WP_038468698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468698.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2350562 2351549 . - . ID=gene2443;Name=SOPEG_RS12055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12055;pseudo=true NZ_CP006568.1 Protein Homology CDS 2350562 2351549 . - 0 ID=cds2407;Parent=gene2443;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lactate dehydrogenase;pseudo=true;transl_except=(pos:complement(2351361..2351363)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2351849 2352974 . + . ID=id353;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2352054 2353133 . + . ID=gene2444;Name=SOPEG_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12060 NZ_CP006568.1 Protein Homology CDS 2352054 2353133 . + 0 ID=cds2408;Parent=gene2444;Dbxref=Genbank:WP_025245535.1;Name=WP_025245535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245535.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2353020 2353124 . + . ID=id354;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2353130 2353576 . + . ID=gene2445;Name=SOPEG_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12065 NZ_CP006568.1 GeneMarkS+ CDS 2353130 2353576 . + 0 ID=cds2409;Parent=gene2445;Dbxref=Genbank:WP_038468701.1;Name=WP_038468701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468701.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2353161 2368692 . + . ID=id355;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2353825 2354235 . - . ID=gene2446;Name=SOPEG_RS12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12070;partial=true;pseudo=true;start_range=.,2353825 NZ_CP006568.1 Protein Homology CDS 2353825 2354235 . - 0 ID=cds2410;Parent=gene2446;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=FMN-dependent NADH-azoreductase;pseudo=true;start_range=.,2353825;transl_table=11 NZ_CP006568.1 RefSeq gene 2354457 2358344 . + . ID=gene2447;Name=SOPEG_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12075;old_locus_tag=SOPEG_2250 NZ_CP006568.1 Protein Homology CDS 2354457 2358344 . + 0 ID=cds2411;Parent=gene2447;Dbxref=Genbank:WP_025245536.1;Name=WP_025245536.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_025245536.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2358369 2359159 . - . ID=gene2448;Name=SOPEG_RS12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12080;pseudo=true NZ_CP006568.1 Protein Homology CDS 2358369 2359159 . - 0 ID=cds2412;Parent=gene2448;exception=annotated by transcript or proteomic data;gbkey=CDS;product=serine protease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2359527 2359841 . - . ID=gene2449;Name=SOPEG_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12085;old_locus_tag=SOPEG_2252 NZ_CP006568.1 Protein Homology CDS 2359527 2359841 . - 0 ID=cds2413;Parent=gene2449;Dbxref=Genbank:WP_025245539.1;Name=WP_025245539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245539.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2360193 2361480 . - . ID=gene2450;Name=SOPEG_RS12090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12090;pseudo=true NZ_CP006568.1 Protein Homology CDS 2360193 2361480 . - 0 ID=cds2414;Parent=gene2450;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sensor protein RstB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2361477 2362204 . - . ID=gene2451;Name=SOPEG_RS12095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12095;pseudo=true NZ_CP006568.1 Protein Homology CDS 2361477 2362204 . - 0 ID=cds2415;Parent=gene2451;Note=response regulator in two-component regulatory system with RstB;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2362481 2362906 . + . ID=gene2452;Name=SOPEG_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12100;old_locus_tag=SOPEG_2255 NZ_CP006568.1 Protein Homology CDS 2362481 2362906 . + 0 ID=cds2416;Parent=gene2452;Dbxref=Genbank:WP_025245540.1;Name=WP_025245540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245540.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2363054 2364008 . - . ID=gene2453;Name=SOPEG_RS12105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12105;pseudo=true NZ_CP006568.1 Protein Homology CDS 2363054 2364008 . - 0 ID=cds2417;Parent=gene2453;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2364202 2365126 . + . ID=gene2454;Name=SOPEG_RS12110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12110;pseudo=true NZ_CP006568.1 Protein Homology CDS 2364202 2365126 . + 0 ID=cds2418;Parent=gene2454;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2365377 2366909 . + . ID=gene2455;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=SOPEG_RS12115;old_locus_tag=SOPEG_2258 NZ_CP006568.1 Protein Homology CDS 2365377 2366909 . + 0 ID=cds2419;Parent=gene2455;Dbxref=Genbank:WP_025245541.1;Name=WP_025245541.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_025245541.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2366920 2368305 . + . ID=gene2456;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=SOPEG_RS12120;old_locus_tag=SOPEG_2259 NZ_CP006568.1 Protein Homology CDS 2366920 2368305 . + 0 ID=cds2420;Parent=gene2456;Dbxref=Genbank:WP_025245542.1;Name=WP_025245542.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_025245542.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2368394 2369128 . - . ID=gene2457;Name=SOPEG_RS12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12125;old_locus_tag=SOPEG_2260;partial=true;pseudo=true;start_range=.,2368394 NZ_CP006568.1 Protein Homology CDS 2368394 2369128 . - 0 ID=cds2421;Parent=gene2457;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=short-chain dehydrogenase;pseudo=true;start_range=.,2368394;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2368774 2371623 . + . ID=id356;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2369433 2370330 . + . ID=gene2458;Name=SOPEG_RS12130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12130;pseudo=true NZ_CP006568.1 Protein Homology CDS 2369433 2370330 . + 0 ID=cds2422;Parent=gene2458;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2370680 2371603 . - . ID=gene2459;Name=SOPEG_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12135;old_locus_tag=SOPEG_2262 NZ_CP006568.1 Protein Homology CDS 2370680 2371603 . - 0 ID=cds2423;Parent=gene2459;Dbxref=Genbank:WP_025245544.1;Name=WP_025245544.1;gbkey=CDS;product=transposase;protein_id=WP_025245544.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2371663 2374659 . + . ID=id357;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2371722 2372645 . - . ID=gene2460;Name=SOPEG_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12140;old_locus_tag=SOPEG_2263 NZ_CP006568.1 Protein Homology CDS 2371722 2372645 . - 0 ID=cds2424;Parent=gene2460;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2372760 2373020 . + . ID=gene2461;Name=SOPEG_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12145 NZ_CP006568.1 Protein Homology CDS 2372760 2373020 . + 0 ID=cds2425;Parent=gene2461;Dbxref=Genbank:WP_025245545.1;Name=WP_025245545.1;gbkey=CDS;product=transposase;protein_id=WP_025245545.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2373053 2374264 . - . ID=gene2462;Name=SOPEG_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12150;old_locus_tag=SOPEG_2265 NZ_CP006568.1 Protein Homology CDS 2373053 2374264 . - 0 ID=cds2426;Parent=gene2462;Dbxref=Genbank:WP_025245546.1;Name=WP_025245546.1;gbkey=CDS;product=transposase;protein_id=WP_025245546.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2374788 2375147 . - . ID=gene2463;Name=SOPEG_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22960 NZ_CP006568.1 Protein Homology CDS 2374788 2375147 . - 0 ID=cds2427;Parent=gene2463;Dbxref=Genbank:WP_025245547.1;Name=WP_025245547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245547.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2376113 2376664 . + . ID=gene2464;Name=SOPEG_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22965 NZ_CP006568.1 Protein Homology CDS 2376113 2376664 . + 0 ID=cds2428;Parent=gene2464;Dbxref=Genbank:WP_051419666.1;Name=WP_051419666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419666.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2376690 2377334 . + . ID=gene2465;Name=SOPEG_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22970 NZ_CP006568.1 Protein Homology CDS 2376690 2377334 . + 0 ID=cds2429;Parent=gene2465;Dbxref=Genbank:WP_051419668.1;Name=WP_051419668.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419668.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2377756 2378223 . + . ID=gene2466;Name=SOPEG_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12165;old_locus_tag=SOPEG_2268 NZ_CP006568.1 Protein Homology CDS 2377756 2378223 . + 0 ID=cds2430;Parent=gene2466;Dbxref=Genbank:WP_025245548.1;Name=WP_025245548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245548.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2378279 2379344 . + . ID=id358;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2378361 2379284 . + . ID=gene2467;Name=SOPEG_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12170;old_locus_tag=SOPEG_2269 NZ_CP006568.1 Protein Homology CDS 2378361 2379284 . + 0 ID=cds2431;Parent=gene2467;Dbxref=Genbank:WP_025244151.1;Name=WP_025244151.1;gbkey=CDS;product=transposase;protein_id=WP_025244151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2379344 2379565 . + . ID=gene2468;Name=SOPEG_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22975 NZ_CP006568.1 GeneMarkS+ CDS 2379344 2379565 . + 0 ID=cds2432;Parent=gene2468;Dbxref=Genbank:WP_051419671.1;Name=WP_051419671.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419671.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2379590 2380240 . + . ID=gene2469;Name=SOPEG_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12175 NZ_CP006568.1 Protein Homology CDS 2379590 2380240 . + 0 ID=cds2433;Parent=gene2469;Dbxref=Genbank:WP_051419673.1;Name=WP_051419673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419673.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2380182 2382794 . + . ID=id359;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2380390 2381136 . + . ID=gene2470;Name=SOPEG_RS22980;end_range=2381136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22980;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2380390 2381136 . + 0 ID=cds2434;Parent=gene2470;end_range=2381136,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2381423 2381647 . + . ID=gene2471;Name=SOPEG_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22985 NZ_CP006568.1 Protein Homology CDS 2381423 2381647 . + 0 ID=cds2435;Parent=gene2471;Dbxref=Genbank:WP_051419675.1;Name=WP_051419675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419675.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2381644 2381910 . + . ID=gene2472;Name=SOPEG_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22990 NZ_CP006568.1 Protein Homology CDS 2381644 2381910 . + 0 ID=cds2436;Parent=gene2472;Dbxref=Genbank:WP_051419676.1;Name=WP_051419676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419676.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2381922 2382671 . + . ID=gene2473;Name=SOPEG_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12185;old_locus_tag=SOPEG_2272 NZ_CP006568.1 Protein Homology CDS 2381922 2382671 . + 0 ID=cds2437;Parent=gene2473;Dbxref=Genbank:WP_025245549.1;Name=WP_025245549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245549.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2382798 2383067 . + . ID=gene2474;Name=SOPEG_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12190 NZ_CP006568.1 Protein Homology CDS 2382798 2383067 . + 0 ID=cds2438;Parent=gene2474;Dbxref=Genbank:WP_025245550.1;Name=WP_025245550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245550.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2383007 2383831 . - . ID=gene2475;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SOPEG_RS12195;old_locus_tag=SOPEG_2273 NZ_CP006568.1 Protein Homology CDS 2383007 2383831 . - 0 ID=cds2439;Parent=gene2475;Dbxref=Genbank:WP_025245551.1;Name=WP_025245551.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=WP_025245551.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2384066 2384404 . + . ID=gene2476;Name=SOPEG_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12200;old_locus_tag=SOPEG_2274 NZ_CP006568.1 Protein Homology CDS 2384066 2384404 . + 0 ID=cds2440;Parent=gene2476;Dbxref=Genbank:WP_025245552.1;Name=WP_025245552.1;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245552.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2384896 2386052 . + . ID=gene2477;Name=SOPEG_RS12205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12205;pseudo=true NZ_CP006568.1 Protein Homology CDS 2384896 2386052 . + 0 ID=cds2441;Parent=gene2477;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acriflavine resistance protein E;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2386054 2389204 . + . ID=gene2478;Name=SOPEG_RS12210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12210;pseudo=true NZ_CP006568.1 Protein Homology CDS 2386054 2389204 . + 0 ID=cds2442;Parent=gene2478;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_except=(pos:2386510..2386512%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2389207 2390634 . + . ID=gene2479;Name=SOPEG_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12215;old_locus_tag=SOPEG_2277 NZ_CP006568.1 Protein Homology CDS 2389207 2390634 . + 0 ID=cds2443;Parent=gene2479;Dbxref=Genbank:WP_025245553.1;Name=WP_025245553.1;gbkey=CDS;product=transporter;protein_id=WP_025245553.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2391001 2391582 . + . ID=gene2480;Name=SOPEG_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12220;old_locus_tag=SOPEG_2278 NZ_CP006568.1 Protein Homology CDS 2391001 2391582 . + 0 ID=cds2444;Parent=gene2480;Dbxref=Genbank:WP_025245554.1;Name=WP_025245554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245554.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2391697 2392254 . - . ID=gene2481;Name=SOPEG_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12225;old_locus_tag=SOPEG_2279 NZ_CP006568.1 Protein Homology CDS 2391697 2392254 . - 0 ID=cds2445;Parent=gene2481;Dbxref=Genbank:WP_025245555.1;Name=WP_025245555.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245555.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2392466 2394718 . - . ID=gene2482;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=SOPEG_RS12230;old_locus_tag=SOPEG_2280 NZ_CP006568.1 Protein Homology CDS 2392466 2394718 . - 0 ID=cds2446;Parent=gene2482;Dbxref=Genbank:WP_025245556.1;Name=WP_025245556.1;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;gbkey=CDS;gene=katE;product=hydroperoxidase;protein_id=WP_025245556.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2395064 2395648 . - . ID=gene2483;Name=SOPEG_RS12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12235;pseudo=true NZ_CP006568.1 Protein Homology CDS 2395064 2395648 . - 0 ID=cds2447;Parent=gene2483;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2395466..2395468)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2395742 2396503 . - . ID=gene2484;Name=SOPEG_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12240;old_locus_tag=SOPEG_2281 NZ_CP006568.1 Protein Homology CDS 2395742 2396503 . - 0 ID=cds2448;Parent=gene2484;Dbxref=Genbank:WP_025245557.1;Name=WP_025245557.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_025245557.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2396580 2396789 . - . ID=gene2485;Name=SOPEG_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12245 NZ_CP006568.1 Protein Homology CDS 2396580 2396789 . - 0 ID=cds2449;Parent=gene2485;Dbxref=Genbank:WP_025245558.1;Name=WP_025245558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245558.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2396895 2399258 . + . ID=id360;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2396973 2397896 . + . ID=gene2486;Name=SOPEG_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12250;old_locus_tag=SOPEG_2283 NZ_CP006568.1 Protein Homology CDS 2396973 2397896 . + 0 ID=cds2450;Parent=gene2486;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2397975 2399183 . - . ID=gene2487;Name=SOPEG_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12255;old_locus_tag=SOPEG_2284 NZ_CP006568.1 Protein Homology CDS 2397975 2399183 . - 0 ID=cds2451;Parent=gene2487;Dbxref=Genbank:WP_025245559.1;Name=WP_025245559.1;gbkey=CDS;product=transposase;protein_id=WP_025245559.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2399289 2400074 . + . ID=gene2488;Name=SOPEG_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12260 NZ_CP006568.1 Protein Homology CDS 2399289 2400074 . + 0 ID=cds2452;Parent=gene2488;Dbxref=Genbank:WP_025245560.1;Name=WP_025245560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245560.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2399889 2411106 . + . ID=id361;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2400076 2400468 . + . ID=gene2489;Name=SOPEG_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22995;old_locus_tag=SOPEG_ps2286 NZ_CP006568.1 GeneMarkS+ CDS 2400076 2400468 . + 0 ID=cds2453;Parent=gene2489;Dbxref=Genbank:WP_051419678.1;Name=WP_051419678.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419678.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2400547 2401962 . + . ID=gene2490;Name=SOPEG_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12265 NZ_CP006568.1 Protein Homology CDS 2400547 2401962 . + 0 ID=cds2454;Parent=gene2490;Dbxref=Genbank:WP_051419680.1;Name=WP_051419680.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419680.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2401980 2402354 . + . ID=gene2491;Name=SOPEG_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12270 NZ_CP006568.1 GeneMarkS+ CDS 2401980 2402354 . + 0 ID=cds2455;Parent=gene2491;Dbxref=Genbank:WP_038468705.1;Name=WP_038468705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468705.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2402351 2402692 . + . ID=gene2492;Name=SOPEG_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12275;old_locus_tag=SOPEG_2289 NZ_CP006568.1 Protein Homology CDS 2402351 2402692 . + 0 ID=cds2456;Parent=gene2492;Dbxref=Genbank:WP_025245562.1;Name=WP_025245562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245562.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2402670 2403854 . + . ID=gene2493;Name=SOPEG_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12280;old_locus_tag=SOPEG_2290 NZ_CP006568.1 Protein Homology CDS 2402670 2403854 . + 0 ID=cds2457;Parent=gene2493;Dbxref=Genbank:WP_025245563.1;Name=WP_025245563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245563.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2403847 2404413 . + . ID=gene2494;Name=SOPEG_RS12285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12285;pseudo=true NZ_CP006568.1 Protein Homology CDS 2403847 2404413 . + 0 ID=cds2458;Parent=gene2494;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2403949..2403951%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2404413 2406074 . + . ID=gene2495;Name=SOPEG_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12290 NZ_CP006568.1 Protein Homology CDS 2404413 2406074 . + 0 ID=cds2459;Parent=gene2495;Dbxref=Genbank:WP_025245564.1;Name=WP_025245564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245564.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2406115 2407176 . + . ID=gene2496;Name=SOPEG_RS12295;end_range=2407176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12295;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2406115 2407176 . + 0 ID=cds2460;Parent=gene2496;end_range=2407176,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2407362 2407511 . + . ID=gene2497;Name=SOPEG_RS12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12300;partial=true;pseudo=true;start_range=.,2407362 NZ_CP006568.1 Protein Homology CDS 2407362 2407511 . + 0 ID=cds2461;Parent=gene2497;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phage tail protein;pseudo=true;start_range=.,2407362;transl_table=11 NZ_CP006568.1 RefSeq gene 2407511 2408221 . + . ID=gene2498;Name=SOPEG_RS12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12305;pseudo=true NZ_CP006568.1 Protein Homology CDS 2407511 2408221 . + 0 ID=cds2462;Parent=gene2498;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2408114..2408116%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2408196 2408731 . + . ID=gene2499;Name=SOPEG_RS12310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12310;pseudo=true NZ_CP006568.1 Protein Homology CDS 2408196 2408731 . + 0 ID=cds2463;Parent=gene2499;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2408736 2410178 . + . ID=gene2500;Name=SOPEG_RS12315;end_range=2410178,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12315;old_locus_tag=SOPEG_2296;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2408736 2410178 . + 0 ID=cds2464;Parent=gene2500;end_range=2410178,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2411225 2411449 . + . ID=gene2501;Name=SOPEG_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12320 NZ_CP006568.1 GeneMarkS+ CDS 2411225 2411449 . + 0 ID=cds2465;Parent=gene2501;Dbxref=Genbank:WP_025245567.1;Name=WP_025245567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245567.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2411505 2412047 . + . ID=gene2502;Name=SOPEG_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12325;old_locus_tag=SOPEG_2300 NZ_CP006568.1 Protein Homology CDS 2411505 2412047 . + 0 ID=cds2466;Parent=gene2502;Dbxref=Genbank:WP_025245568.1;Name=WP_025245568.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245568.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2412237 2413541 . + . ID=gene2503;Name=SOPEG_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12330;old_locus_tag=SOPEG_2301 NZ_CP006568.1 Protein Homology CDS 2412237 2413541 . + 0 ID=cds2467;Parent=gene2503;Dbxref=Genbank:WP_025245569.1;Name=WP_025245569.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025245569.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2414211 2414716 . + . ID=gene2504;Name=SOPEG_RS12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12335;pseudo=true NZ_CP006568.1 Protein Homology CDS 2414211 2414716 . + 0 ID=cds2468;Parent=gene2504;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2414853 2418302 . - . ID=gene2505;Name=SOPEG_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12340;old_locus_tag=SOPEG_2303 NZ_CP006568.1 Protein Homology CDS 2414853 2418302 . - 0 ID=cds2469;Parent=gene2505;Dbxref=Genbank:WP_025245570.1;Name=WP_025245570.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_025245570.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2418512 2419714 . + . ID=gene2506;Name=SOPEG_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12345;old_locus_tag=SOPEG_2304 NZ_CP006568.1 Protein Homology CDS 2418512 2419714 . + 0 ID=cds2470;Parent=gene2506;Dbxref=Genbank:WP_025245571.1;Name=WP_025245571.1;gbkey=CDS;product=transporter;protein_id=WP_025245571.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2419707 2420414 . + . ID=gene2507;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=SOPEG_RS12350;old_locus_tag=SOPEG_2305 NZ_CP006568.1 Protein Homology CDS 2419707 2420414 . + 0 ID=cds2471;Parent=gene2507;Dbxref=Genbank:WP_025245572.1;Name=WP_025245572.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein ABC transporter ATP-binding protein;protein_id=WP_025245572.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2420411 2421655 . + . ID=gene2508;Name=SOPEG_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12355;old_locus_tag=SOPEG_2306 NZ_CP006568.1 Protein Homology CDS 2420411 2421655 . + 0 ID=cds2472;Parent=gene2508;Dbxref=Genbank:WP_025245573.1;Name=WP_025245573.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=WP_025245573.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2421678 2422508 . + . ID=gene2509;Name=SOPEG_RS12360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12360;pseudo=true NZ_CP006568.1 Protein Homology CDS 2421678 2422508 . + 0 ID=cds2473;Parent=gene2509;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;pseudo=true;transl_except=(pos:2422236..2422238%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2422611 2423873 . + . ID=gene2510;Name=SOPEG_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12365;old_locus_tag=SOPEG_2308 NZ_CP006568.1 Protein Homology CDS 2422611 2423873 . + 0 ID=cds2474;Parent=gene2510;Dbxref=Genbank:WP_025245574.1;Name=WP_025245574.1;gbkey=CDS;product=peptidase T;protein_id=WP_025245574.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2424114 2425232 . - . ID=gene2511;Name=SOPEG_RS12370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12370;pseudo=true NZ_CP006568.1 Protein Homology CDS 2424114 2425232 . - 0 ID=cds2475;Parent=gene2511;gbkey=CDS;product=50S ribosomal protein L16 arginine hydroxylase;pseudo=true;transl_except=(pos:complement(2425047..2425049)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2425345 2426811 . - . ID=gene2512;Name=SOPEG_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12375;old_locus_tag=SOPEG_2310 NZ_CP006568.1 Protein Homology CDS 2425345 2426811 . - 0 ID=cds2476;Parent=gene2512;Dbxref=Genbank:WP_025245575.1;Name=WP_025245575.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_025245575.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2426817 2427488 . - . ID=gene2513;Name=SOPEG_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12380;old_locus_tag=SOPEG_2311 NZ_CP006568.1 Protein Homology CDS 2426817 2427488 . - 0 ID=cds2477;Parent=gene2513;Dbxref=Genbank:WP_025245576.1;Name=WP_025245576.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_025245576.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2427667 2429037 . - . ID=gene2514;Name=SOPEG_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12385;old_locus_tag=SOPEG_2312 NZ_CP006568.1 Protein Homology CDS 2427667 2429037 . - 0 ID=cds2478;Parent=gene2514;Dbxref=Genbank:WP_025245577.1;Name=WP_025245577.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_025245577.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2429059 2429688 . - . ID=gene2515;Name=SOPEG_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12390;old_locus_tag=SOPEG_2313 NZ_CP006568.1 Protein Homology CDS 2429059 2429688 . - 0 ID=cds2479;Parent=gene2515;Dbxref=Genbank:WP_025245578.1;Name=WP_025245578.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=lysogenization regulator;protein_id=WP_025245578.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2429907 2431016 . - . ID=gene2516;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=SOPEG_RS12395;old_locus_tag=SOPEG_2314 NZ_CP006568.1 Protein Homology CDS 2429907 2431016 . - 0 ID=cds2480;Parent=gene2516;Dbxref=Genbank:WP_025245579.1;Name=WP_025245579.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=WP_025245579.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2431265 2431711 . - . ID=gene2517;Name=SOPEG_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12400;old_locus_tag=SOPEG_2315 NZ_CP006568.1 Protein Homology CDS 2431265 2431711 . - 0 ID=cds2481;Parent=gene2517;Dbxref=Genbank:WP_025245580.1;Name=WP_025245580.1;gbkey=CDS;product=phosphatase;protein_id=WP_025245580.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2431748 2432305 . - . ID=gene2518;Name=SOPEG_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12405 NZ_CP006568.1 Protein Homology CDS 2431748 2432305 . - 0 ID=cds2482;Parent=gene2518;Dbxref=Genbank:WP_038470111.1;Name=WP_038470111.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase;protein_id=WP_038470111.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2433009 2434329 . + . ID=id362;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2433084 2434292 . + . ID=gene2519;Name=SOPEG_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12410;old_locus_tag=SOPEG_2318 NZ_CP006568.1 Protein Homology CDS 2433084 2434292 . + 0 ID=cds2483;Parent=gene2519;Dbxref=Genbank:WP_025245582.1;Name=WP_025245582.1;gbkey=CDS;product=transposase;protein_id=WP_025245582.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2434353 2435470 . - . ID=gene2520;Name=SOPEG_RS12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12415;pseudo=true NZ_CP006568.1 Protein Homology CDS 2434353 2435470 . - 0 ID=cds2484;Parent=gene2520;exception=annotated by transcript or proteomic data;gbkey=CDS;product=mechanosensitive ion channel protein MscS;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2435421 2435873 . - . ID=gene2521;Name=SOPEG_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12420;old_locus_tag=SOPEG_2320 NZ_CP006568.1 Protein Homology CDS 2435421 2435873 . - 0 ID=cds2485;Parent=gene2521;Dbxref=Genbank:WP_025245583.1;Name=WP_025245583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245583.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2436058 2437365 . - . ID=gene2522;Name=SOPEG_RS12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12425;pseudo=true NZ_CP006568.1 Protein Homology CDS 2436058 2437365 . - 0 ID=cds2486;Parent=gene2522;gbkey=CDS;product=prop;pseudo=true;transl_except=(pos:complement(2436892..2436894)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2437648 2438401 . + . ID=gene2523;Name=SOPEG_RS12430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12430;pseudo=true NZ_CP006568.1 Protein Homology CDS 2437648 2438401 . + 0 ID=cds2487;Parent=gene2523;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2438700 2439389 . + . ID=gene2524;Name=SOPEG_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12435;old_locus_tag=SOPEG_2323 NZ_CP006568.1 Protein Homology CDS 2438700 2439389 . + 0 ID=cds2488;Parent=gene2524;Dbxref=Genbank:WP_025245584.1;Name=WP_025245584.1;gbkey=CDS;product=thiamine biosynthesis protein ThiJ;protein_id=WP_025245584.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2439448 2440456 . + . ID=gene2525;Name=SOPEG_RS12440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12440;pseudo=true NZ_CP006568.1 Protein Homology CDS 2439448 2440456 . + 0 ID=cds2489;Parent=gene2525;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2440459 2441019 . + . ID=gene2526;Name=SOPEG_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12445;old_locus_tag=SOPEG_2325 NZ_CP006568.1 Protein Homology CDS 2440459 2441019 . + 0 ID=cds2490;Parent=gene2526;Dbxref=Genbank:WP_025245585.1;Name=WP_025245585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245585.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2441038 2442310 . - . ID=gene2527;Name=SOPEG_RS12450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12450;pseudo=true NZ_CP006568.1 Protein Homology CDS 2441038 2442310 . - 0 ID=cds2491;Parent=gene2527;exception=annotated by transcript or proteomic data;gbkey=CDS;product=proline iminopeptidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2442519 2443762 . - . ID=gene2528;Name=SOPEG_RS12455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12455;pseudo=true NZ_CP006568.1 Protein Homology CDS 2442519 2443762 . - 0 ID=cds2492;Parent=gene2528;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2443154..2443156)%2Caa:Other),(pos:complement(2442621..2442623)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2443855 2444466 . - . ID=gene2529;Name=SOPEG_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12460 NZ_CP006568.1 GeneMarkS+ CDS 2443855 2444466 . - 0 ID=cds2493;Parent=gene2529;Dbxref=Genbank:WP_025245586.1;Name=WP_025245586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245586.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2444878 2446215 . - . ID=gene2530;Name=SOPEG_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12465;old_locus_tag=SOPEG_2329 NZ_CP006568.1 Protein Homology CDS 2444878 2446215 . - 0 ID=cds2494;Parent=gene2530;Dbxref=Genbank:WP_025245587.1;Name=WP_025245587.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_025245587.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2446429 2446815 . - . ID=gene2531;Name=SOPEG_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12470 NZ_CP006568.1 Protein Homology CDS 2446429 2446815 . - 0 ID=cds2495;Parent=gene2531;Dbxref=Genbank:WP_038468712.1;Name=WP_038468712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468712.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2447296 2448581 . + . ID=id363;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2447385 2448378 . - . ID=gene2532;Name=SOPEG_RS23000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23000;old_locus_tag=SOPEG_ps2331;pseudo=true NZ_CP006568.1 Protein Homology CDS 2447385 2448378 . - 0 ID=cds2496;Parent=gene2532;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2450016 2450848 . - . ID=gene2533;Name=SOPEG_RS12480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12480;pseudo=true NZ_CP006568.1 Protein Homology CDS 2450016 2450848 . - 0 ID=cds2497;Parent=gene2533;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2450889 2451749 . - . ID=gene2534;Name=SOPEG_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12485;old_locus_tag=SOPEG_2333 NZ_CP006568.1 Protein Homology CDS 2450889 2451749 . - 0 ID=cds2498;Parent=gene2534;Dbxref=Genbank:WP_025245590.1;Name=WP_025245590.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245590.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2451742 2452524 . - . ID=gene2535;Name=SOPEG_RS12490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12490;pseudo=true NZ_CP006568.1 Protein Homology CDS 2451742 2452524 . - 0 ID=cds2499;Parent=gene2535;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2452276..2452278)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2452521 2453454 . - . ID=gene2536;Name=SOPEG_RS12495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12495;pseudo=true NZ_CP006568.1 Protein Homology CDS 2452521 2453454 . - 0 ID=cds2500;Parent=gene2536;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-binding protein;pseudo=true;transl_except=(pos:complement(2453265..2453267)%2Caa:Other),(pos:complement(2452923..2452925)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2453723 2454190 . + . ID=gene2537;Name=SOPEG_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12500;old_locus_tag=SOPEG_2336 NZ_CP006568.1 Protein Homology CDS 2453723 2454190 . + 0 ID=cds2501;Parent=gene2537;Dbxref=Genbank:WP_025245594.1;Name=WP_025245594.1;gbkey=CDS;product=manganese transporter;protein_id=WP_025245594.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2454629 2455952 . + . ID=id364;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2454706 2455756 . + . ID=gene2538;Name=SOPEG_RS12505;end_range=2455756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12505;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2454706 2455756 . + 0 ID=cds2502;Parent=gene2538;end_range=2455756,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2455966 2456175 . + . ID=gene2539;Name=SOPEG_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12510 NZ_CP006568.1 GeneMarkS+ CDS 2455966 2456175 . + 0 ID=cds2503;Parent=gene2539;Dbxref=Genbank:WP_025245595.1;Name=WP_025245595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245595.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2456531 2457460 . + . ID=gene2540;Name=SOPEG_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12515;old_locus_tag=SOPEG_2340 NZ_CP006568.1 Protein Homology CDS 2456531 2457460 . + 0 ID=cds2504;Parent=gene2540;Dbxref=Genbank:WP_025245596.1;Name=WP_025245596.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_025245596.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2457513 2458910 . - . ID=gene2541;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=SOPEG_RS12520;old_locus_tag=SOPEG_2341 NZ_CP006568.1 Protein Homology CDS 2457513 2458910 . - 0 ID=cds2505;Parent=gene2541;Dbxref=Genbank:WP_025245597.1;Name=WP_025245597.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=WP_025245597.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2459074 2460252 . + . ID=gene2542;Name=SOPEG_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12525;old_locus_tag=SOPEG_2342 NZ_CP006568.1 Protein Homology CDS 2459074 2460252 . + 0 ID=cds2506;Parent=gene2542;Dbxref=Genbank:WP_025245598.1;Name=WP_025245598.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_025245598.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2460395 2461925 . + . ID=gene2543;Name=SOPEG_RS12530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12530;pseudo=true NZ_CP006568.1 Protein Homology CDS 2460395 2461925 . + 0 ID=cds2507;Parent=gene2543;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2462053 2462931 . + . ID=gene2544;Name=SOPEG_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12535;old_locus_tag=SOPEG_2344 NZ_CP006568.1 Protein Homology CDS 2462053 2462931 . + 0 ID=cds2508;Parent=gene2544;Dbxref=Genbank:WP_025245599.1;Name=WP_025245599.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_025245599.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2463001 2463282 . - . ID=gene2545;Name=SOPEG_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12540 NZ_CP006568.1 GeneMarkS+ CDS 2463001 2463282 . - 0 ID=cds2509;Parent=gene2545;Dbxref=Genbank:WP_038468715.1;Name=WP_038468715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468715.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2463285 2464226 . - . ID=gene2546;Name=SOPEG_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12545 NZ_CP006568.1 GeneMarkS+ CDS 2463285 2464226 . - 0 ID=cds2510;Parent=gene2546;Dbxref=Genbank:WP_025245601.1;Name=WP_025245601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245601.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2464341 2465405 . - . ID=gene2547;Name=SOPEG_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23005;old_locus_tag=SOPEG_ps2345 NZ_CP006568.1 Protein Homology CDS 2464341 2465405 . - 0 ID=cds2511;Parent=gene2547;Dbxref=Genbank:WP_051419682.1;Name=WP_051419682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419682.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2465459 2465659 . + . ID=gene2548;Name=SOPEG_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12555 NZ_CP006568.1 GeneMarkS+ CDS 2465459 2465659 . + 0 ID=cds2512;Parent=gene2548;Dbxref=Genbank:WP_038468718.1;Name=WP_038468718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468718.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2465944 2467325 . + . ID=id365;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2466345 2467364 . + . ID=gene2549;Name=SOPEG_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12560 NZ_CP006568.1 Protein Homology CDS 2466345 2467364 . + 0 ID=cds2513;Parent=gene2549;Dbxref=Genbank:WP_025245603.1;Name=WP_025245603.1;gbkey=CDS;product=transposase;protein_id=WP_025245603.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2467333 2467518 . + . ID=gene2550;Name=SOPEG_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12565 NZ_CP006568.1 GeneMarkS+ CDS 2467333 2467518 . + 0 ID=cds2514;Parent=gene2550;Dbxref=Genbank:WP_038468725.1;Name=WP_038468725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468725.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2467781 2468059 . + . ID=gene2551;Name=SOPEG_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12570 NZ_CP006568.1 GeneMarkS+ CDS 2467781 2468059 . + 0 ID=cds2515;Parent=gene2551;Dbxref=Genbank:WP_038468728.1;Name=WP_038468728.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468728.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2468157 2469137 . - . ID=gene2552;Name=SOPEG_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12575;old_locus_tag=SOPEG_2348 NZ_CP006568.1 Protein Homology CDS 2468157 2469137 . - 0 ID=cds2516;Parent=gene2552;Dbxref=Genbank:WP_025245606.1;Name=WP_025245606.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_025245606.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2469512 2469877 . + . ID=gene2553;Name=SOPEG_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23010 NZ_CP006568.1 Protein Homology CDS 2469512 2469877 . + 0 ID=cds2517;Parent=gene2553;Dbxref=Genbank:WP_025245607.1;Name=WP_025245607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245607.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2470225 2470860 . + . ID=gene2554;Name=SOPEG_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23015 NZ_CP006568.1 Protein Homology CDS 2470225 2470860 . + 0 ID=cds2518;Parent=gene2554;Dbxref=Genbank:WP_025245608.1;Name=WP_025245608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245608.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2470906 2472409 . + . ID=gene2555;Name=SOPEG_RS12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12585;pseudo=true NZ_CP006568.1 Protein Homology CDS 2470906 2472409 . + 0 ID=cds2519;Parent=gene2555;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arabinose isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2472660 2472875 . + . ID=gene2556;Name=SOPEG_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12590;old_locus_tag=SOPEG_2351 NZ_CP006568.1 Protein Homology CDS 2472660 2472875 . + 0 ID=cds2520;Parent=gene2556;Dbxref=Genbank:WP_025245609.1;Name=WP_025245609.1;Note=YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_025245609.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2472878 2473296 . + . ID=gene2557;Name=SOPEG_RS12595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12595;pseudo=true NZ_CP006568.1 Protein Homology CDS 2472878 2473296 . + 0 ID=cds2521;Parent=gene2557;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2473283 2473498 . - . ID=gene2558;Name=SOPEG_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12600 NZ_CP006568.1 GeneMarkS+ CDS 2473283 2473498 . - 0 ID=cds2522;Parent=gene2558;Dbxref=Genbank:WP_025245610.1;Name=WP_025245610.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245610.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2473498 2474079 . + . ID=gene2559;Name=SOPEG_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12605;old_locus_tag=SOPEG_2353 NZ_CP006568.1 Protein Homology CDS 2473498 2474079 . + 0 ID=cds2523;Parent=gene2559;Dbxref=Genbank:WP_025245611.1;Name=WP_025245611.1;gbkey=CDS;product=electron transporter RsxA;protein_id=WP_025245611.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2474079 2474651 . + . ID=gene2560;Name=SOPEG_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12610;old_locus_tag=SOPEG_2354 NZ_CP006568.1 Protein Homology CDS 2474079 2474651 . + 0 ID=cds2524;Parent=gene2560;Dbxref=Genbank:WP_025245612.1;Name=WP_025245612.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RnfB;protein_id=WP_025245612.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2474644 2476713 . + . ID=gene2561;Name=SOPEG_RS12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12615;pseudo=true NZ_CP006568.1 Protein Homology CDS 2474644 2476713 . + 0 ID=cds2525;Parent=gene2561;exception=annotated by transcript or proteomic data;gbkey=CDS;product=electron transporter RnfC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2476713 2477753 . + . ID=gene2562;Name=SOPEG_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12620;old_locus_tag=SOPEG_2356 NZ_CP006568.1 Protein Homology CDS 2476713 2477753 . + 0 ID=cds2526;Parent=gene2562;Dbxref=Genbank:WP_025245613.1;Name=WP_025245613.1;gbkey=CDS;product=electron transporter RnfD;protein_id=WP_025245613.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2477764 2478399 . + . ID=gene2563;Name=SOPEG_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12625;old_locus_tag=SOPEG_2357 NZ_CP006568.1 Protein Homology CDS 2477764 2478399 . + 0 ID=cds2527;Parent=gene2563;Dbxref=Genbank:WP_025245614.1;Name=WP_025245614.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_025245614.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2478392 2479090 . + . ID=gene2564;Name=SOPEG_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12630;old_locus_tag=SOPEG_2358 NZ_CP006568.1 Protein Homology CDS 2478392 2479090 . + 0 ID=cds2528;Parent=gene2564;Dbxref=Genbank:WP_025245615.1;Name=WP_025245615.1;gbkey=CDS;product=elongation factor G;protein_id=WP_025245615.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2479083 2479721 . + . ID=gene2565;Name=SOPEG_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12635;old_locus_tag=SOPEG_2359 NZ_CP006568.1 Protein Homology CDS 2479083 2479721 . + 0 ID=cds2529;Parent=gene2565;Dbxref=Genbank:WP_025245616.1;Name=WP_025245616.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_025245616.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2480274 2481797 . + . ID=gene2566;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=SOPEG_RS12640;old_locus_tag=SOPEG_2360 NZ_CP006568.1 Protein Homology CDS 2480274 2481797 . + 0 ID=cds2530;Parent=gene2566;Dbxref=Genbank:WP_025245617.1;Name=WP_025245617.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=peptide ABC transporter permease;protein_id=WP_025245617.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2481939 2482802 . - . ID=gene2567;Name=SOPEG_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12645;old_locus_tag=SOPEG_2361 NZ_CP006568.1 Protein Homology CDS 2481939 2482802 . - 0 ID=cds2531;Parent=gene2567;Dbxref=Genbank:WP_025245618.1;Name=WP_025245618.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_025245618.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2482883 2484157 . - . ID=gene2568;Name=SOPEG_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12650;old_locus_tag=SOPEG_2362 NZ_CP006568.1 Protein Homology CDS 2482883 2484157 . - 0 ID=cds2532;Parent=gene2568;Dbxref=Genbank:WP_025245619.1;Name=WP_025245619.1;gbkey=CDS;product=tyrosyl-tRNA synthetase;protein_id=WP_025245619.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2484317 2484967 . - . ID=gene2569;Name=SOPEG_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12655;old_locus_tag=SOPEG_2363 NZ_CP006568.1 Protein Homology CDS 2484317 2484967 . - 0 ID=cds2533;Parent=gene2569;Dbxref=Genbank:WP_025245620.1;Name=WP_025245620.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_025245620.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2485029 2485349 . - . ID=gene2570;Name=SOPEG_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12660;old_locus_tag=SOPEG_2364 NZ_CP006568.1 Protein Homology CDS 2485029 2485349 . - 0 ID=cds2534;Parent=gene2570;Dbxref=Genbank:WP_025245621.1;Name=WP_025245621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245621.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2485426 2486524 . - . ID=gene2571;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=pseudogene;gene_synonym=ydhH;locus_tag=SOPEG_RS12665;pseudo=true NZ_CP006568.1 Protein Homology CDS 2485426 2486524 . - 0 ID=cds2535;Parent=gene2571;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2486851 2487318 . + . ID=gene2572;Name=SOPEG_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12670;old_locus_tag=SOPEG_2366 NZ_CP006568.1 Protein Homology CDS 2486851 2487318 . + 0 ID=cds2536;Parent=gene2572;Dbxref=Genbank:WP_025245622.1;Name=WP_025245622.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245622.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2487396 2487830 . - . ID=gene2573;Name=SOPEG_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12675;old_locus_tag=SOPEG_2367 NZ_CP006568.1 Protein Homology CDS 2487396 2487830 . - 0 ID=cds2537;Parent=gene2573;Dbxref=Genbank:WP_025245623.1;Name=WP_025245623.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_025245623.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2489100 2489507 . + . ID=gene2574;Name=SOPEG_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12680;old_locus_tag=SOPEG_2368 NZ_CP006568.1 Protein Homology CDS 2489100 2489507 . + 0 ID=cds2538;Parent=gene2574;Dbxref=Genbank:WP_025245624.1;Name=WP_025245624.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=glyoxalase I;protein_id=WP_025245624.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2489638 2490342 . + . ID=gene2575;Name=SOPEG_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12685;old_locus_tag=SOPEG_2369 NZ_CP006568.1 Protein Homology CDS 2489638 2490342 . + 0 ID=cds2539;Parent=gene2575;Dbxref=Genbank:WP_025245625.1;Name=WP_025245625.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_025245625.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2490647 2490994 . - . ID=gene2576;Name=SOPEG_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12690;old_locus_tag=SOPEG_2370 NZ_CP006568.1 Protein Homology CDS 2490647 2490994 . - 0 ID=cds2540;Parent=gene2576;Dbxref=Genbank:WP_025245626.1;Name=WP_025245626.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_025245626.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2491399 2492260 . + . ID=gene2577;Name=SOPEG_RS12695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12695;pseudo=true NZ_CP006568.1 Protein Homology CDS 2491399 2492260 . + 0 ID=cds2541;Parent=gene2577;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2492405 2492599 . + . ID=gene2578;Name=SOPEG_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12700 NZ_CP006568.1 GeneMarkS+ CDS 2492405 2492599 . + 0 ID=cds2542;Parent=gene2578;Dbxref=Genbank:WP_025245627.1;Name=WP_025245627.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245627.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2492784 2493803 . + . ID=gene2579;Name=SOPEG_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12705;old_locus_tag=SOPEG_2372 NZ_CP006568.1 Protein Homology CDS 2492784 2493803 . + 0 ID=cds2543;Parent=gene2579;Dbxref=Genbank:WP_025245628.1;Name=WP_025245628.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245628.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2494276 2495408 . + . ID=gene2580;Name=SOPEG_RS12710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12710;pseudo=true NZ_CP006568.1 Protein Homology CDS 2494276 2495408 . + 0 ID=cds2544;Parent=gene2580;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2495476 2496093 . - . ID=gene2581;Name=SOPEG_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12715;old_locus_tag=SOPEG_2374 NZ_CP006568.1 Protein Homology CDS 2495476 2496093 . - 0 ID=cds2545;Parent=gene2581;Dbxref=Genbank:WP_025245629.1;Name=WP_025245629.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_025245629.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2496596 2496823 . - . ID=gene2582;Name=SOPEG_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12720 NZ_CP006568.1 GeneMarkS+ CDS 2496596 2496823 . - 0 ID=cds2546;Parent=gene2582;Dbxref=Genbank:WP_025245630.1;Name=WP_025245630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245630.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2496827 2497072 . + . ID=gene2583;Name=SOPEG_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12725 NZ_CP006568.1 Protein Homology CDS 2496827 2497072 . + 0 ID=cds2547;Parent=gene2583;Dbxref=Genbank:WP_025245631.1;Name=WP_025245631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245631.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2497230 2497306 . + . ID=gene2584;Name=SOPEG_RS12730;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS12730;old_locus_tag=SOPEG_t2376 NZ_CP006568.1 tRNAscan-SE tRNA 2497230 2497306 . + . ID=rna36;Parent=gene2584;anticodon=(pos:2497264..2497266);gbkey=tRNA;product=tRNA-Val NZ_CP006568.1 tRNAscan-SE exon 2497230 2497306 . + . ID=id366;Parent=rna36;anticodon=(pos:2497264..2497266);gbkey=tRNA;product=tRNA-Val NZ_CP006568.1 RefSeq gene 2497833 2499239 . + . ID=gene2585;Name=SOPEG_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12735;old_locus_tag=SOPEG_2377 NZ_CP006568.1 Protein Homology CDS 2497833 2499239 . + 0 ID=cds2548;Parent=gene2585;Dbxref=Genbank:WP_025245632.1;Name=WP_025245632.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_025245632.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2499704 2500772 . + . ID=id367;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2499786 2500709 . + . ID=gene2586;Name=SOPEG_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12740;old_locus_tag=SOPEG_2378 NZ_CP006568.1 Protein Homology CDS 2499786 2500709 . + 0 ID=cds2549;Parent=gene2586;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2500860 2501096 . + . ID=gene2587;Name=SOPEG_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12745;old_locus_tag=SOPEG_2379 NZ_CP006568.1 Protein Homology CDS 2500860 2501096 . + 0 ID=cds2550;Parent=gene2587;Dbxref=Genbank:WP_025245633.1;Name=WP_025245633.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=murein lipoprotein;protein_id=WP_025245633.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2501277 2501525 . + . ID=gene2588;Name=SOPEG_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12750 NZ_CP006568.1 GeneMarkS+ CDS 2501277 2501525 . + 0 ID=cds2551;Parent=gene2588;Dbxref=Genbank:WP_038468733.1;Name=WP_038468733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468733.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2501601 2501846 . - . ID=gene2589;Name=SOPEG_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12755 NZ_CP006568.1 Protein Homology CDS 2501601 2501846 . - 0 ID=cds2552;Parent=gene2589;Dbxref=Genbank:WP_025245634.1;Name=WP_025245634.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245634.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2501862 2503182 . + . ID=id368;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2501920 2503107 . - . ID=gene2590;Name=SOPEG_RS12760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12760;old_locus_tag=SOPEG_2381;partial=true;pseudo=true;start_range=.,2501920 NZ_CP006568.1 Protein Homology CDS 2501920 2503107 . - 0 ID=cds2553;Parent=gene2590;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2501920;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2503195 2505817 . + . ID=id369;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2503316 2504066 . - . ID=gene2591;Name=SOPEG_RS12765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12765;pseudo=true NZ_CP006568.1 Protein Homology CDS 2503316 2504066 . - 0 ID=cds2554;Parent=gene2591;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2504078 2505628 . - . ID=gene2592;Name=SOPEG_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12770 NZ_CP006568.1 Protein Homology CDS 2504078 2505628 . - 0 ID=cds2555;Parent=gene2592;Dbxref=Genbank:WP_051419684.1;Name=WP_051419684.1;gbkey=CDS;product=transposase;protein_id=WP_051419684.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2505808 2506554 . - . ID=gene2593;Name=SOPEG_RS12775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12775;partial=true;pseudo=true;start_range=.,2505808 NZ_CP006568.1 Protein Homology CDS 2505808 2506554 . - 0 ID=cds2556;Parent=gene2593;gbkey=CDS;partial=true;product=peptidoglycan-binding protein;pseudo=true;start_range=.,2505808;transl_except=(pos:complement(2506441..2506443)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2507022 2507438 . - . ID=gene2594;Name=SOPEG_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12780;old_locus_tag=SOPEG_2384 NZ_CP006568.1 Protein Homology CDS 2507022 2507438 . - 0 ID=cds2557;Parent=gene2594;Dbxref=Genbank:WP_025245638.1;Name=WP_025245638.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desufuration protein SufE;protein_id=WP_025245638.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2507463 2508686 . - . ID=gene2595;Name=SOPEG_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12785;old_locus_tag=SOPEG_2385 NZ_CP006568.1 Protein Homology CDS 2507463 2508686 . - 0 ID=cds2558;Parent=gene2595;Dbxref=Genbank:WP_025245639.1;Name=WP_025245639.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_025245639.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2508683 2509969 . - . ID=gene2596;Name=SOPEG_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12790;old_locus_tag=SOPEG_2386 NZ_CP006568.1 Protein Homology CDS 2508683 2509969 . - 0 ID=cds2559;Parent=gene2596;Dbxref=Genbank:WP_025245640.1;Name=WP_025245640.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_025245640.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2509944 2510690 . - . ID=gene2597;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SOPEG_RS12795;old_locus_tag=SOPEG_2387 NZ_CP006568.1 Protein Homology CDS 2509944 2510690 . - 0 ID=cds2560;Parent=gene2597;Dbxref=Genbank:WP_025245641.1;Name=WP_025245641.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_025245641.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2510753 2512258 . - . ID=gene2598;Name=SOPEG_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12800;old_locus_tag=SOPEG_2388 NZ_CP006568.1 Protein Homology CDS 2510753 2512258 . - 0 ID=cds2561;Parent=gene2598;Dbxref=Genbank:WP_025245642.1;Name=WP_025245642.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_025245642.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2512272 2512646 . - . ID=gene2599;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=SOPEG_RS12805;old_locus_tag=SOPEG_2389 NZ_CP006568.1 Protein Homology CDS 2512272 2512646 . - 0 ID=cds2562;Parent=gene2599;Dbxref=Genbank:WP_025245643.1;Name=WP_025245643.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_025245643.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2513456 2513851 . + . ID=gene2600;Name=SOPEG_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23020 NZ_CP006568.1 Protein Homology CDS 2513456 2513851 . + 0 ID=cds2563;Parent=gene2600;Dbxref=Genbank:WP_025245644.1;Name=WP_025245644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245644.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2513833 2514390 . + . ID=gene2601;Name=SOPEG_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23025 NZ_CP006568.1 Protein Homology CDS 2513833 2514390 . + 0 ID=cds2564;Parent=gene2601;Dbxref=Genbank:WP_025245645.1;Name=WP_025245645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245645.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2514380 2516988 . - . ID=gene2602;Name=SOPEG_RS12815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12815;pseudo=true NZ_CP006568.1 Protein Homology CDS 2514380 2516988 . - 0 ID=cds2565;Parent=gene2602;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2516446..2516448)%2Caa:Other),(pos:complement(2514665..2514667)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2517016 2517294 . - . ID=gene2603;Name=SOPEG_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12820 NZ_CP006568.1 GeneMarkS+ CDS 2517016 2517294 . - 0 ID=cds2566;Parent=gene2603;Dbxref=Genbank:WP_038468737.1;Name=WP_038468737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468737.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2517569 2518669 . + . ID=gene2604;Name=SOPEG_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12825;old_locus_tag=SOPEG_2392 NZ_CP006568.1 Protein Homology CDS 2517569 2518669 . + 0 ID=cds2567;Parent=gene2604;Dbxref=Genbank:WP_025245646.1;Name=WP_025245646.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245646.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2519068 2520681 . - . ID=gene2605;Name=SOPEG_RS12830;end_range=2520681,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12830;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2519068 2520681 . - 0 ID=cds2568;Parent=gene2605;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;end_range=2520681,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2520673 2521748 . + . ID=id370;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2520735 2520875 . - . ID=gene2606;Name=SOPEG_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12835 NZ_CP006568.1 Protein Homology CDS 2520735 2520875 . - 0 ID=cds2569;Parent=gene2606;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2520910 2521170 . + . ID=gene2607;Name=SOPEG_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12840 NZ_CP006568.1 GeneMarkS+ CDS 2520910 2521170 . + 0 ID=cds2570;Parent=gene2607;Dbxref=Genbank:WP_025245648.1;Name=WP_025245648.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245648.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2521167 2521667 . - . ID=gene2608;Name=SOPEG_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23030 NZ_CP006568.1 Protein Homology CDS 2521167 2521667 . - 0 ID=cds2571;Parent=gene2608;Dbxref=Genbank:WP_025245649.1;Name=WP_025245649.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245649.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2521776 2522522 . - . ID=gene2609;Name=SOPEG_RS12845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12845;partial=true;pseudo=true;start_range=.,2521776 NZ_CP006568.1 Protein Homology CDS 2521776 2522522 . - 0 ID=cds2572;Parent=gene2609;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=phosphoenolpyruvate synthase;pseudo=true;start_range=.,2521776;transl_except=(pos:complement(2522176..2522178)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2522716 2523537 . + . ID=gene2610;Name=SOPEG_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12850;old_locus_tag=SOPEG_2395 NZ_CP006568.1 Protein Homology CDS 2522716 2523537 . + 0 ID=cds2573;Parent=gene2610;Dbxref=Genbank:WP_025245652.1;Name=WP_025245652.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245652.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2523642 2524635 . + . ID=gene2611;Name=SOPEG_RS12855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12855;pseudo=true NZ_CP006568.1 Protein Homology CDS 2523642 2524635 . + 0 ID=cds2574;Parent=gene2611;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2524983 2525564 . + . ID=gene2612;Name=SOPEG_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12860 NZ_CP006568.1 GeneMarkS+ CDS 2524983 2525564 . + 0 ID=cds2575;Parent=gene2612;Dbxref=Genbank:WP_025245653.1;Name=WP_025245653.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245653.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2525610 2525963 . + . ID=gene2613;Name=SOPEG_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12865 NZ_CP006568.1 GeneMarkS+ CDS 2525610 2525963 . + 0 ID=cds2576;Parent=gene2613;Dbxref=Genbank:WP_025245654.1;Name=WP_025245654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245654.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2526041 2528639 . + . ID=id371;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2526163 2526912 . - . ID=gene2614;Name=SOPEG_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12870;old_locus_tag=SOPEG_2398 NZ_CP006568.1 Protein Homology CDS 2526163 2526912 . - 0 ID=cds2577;Parent=gene2614;Dbxref=Genbank:WP_025245655.1;Name=WP_025245655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245655.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2526924 2528441 . - . ID=gene2615;Name=SOPEG_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12875;old_locus_tag=SOPEG_2399 NZ_CP006568.1 Protein Homology CDS 2526924 2528441 . - 0 ID=cds2578;Parent=gene2615;Dbxref=Genbank:WP_038468741.1;Name=WP_038468741.1;gbkey=CDS;product=transposase;protein_id=WP_038468741.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2528586 2530048 . - . ID=gene2616;Name=SOPEG_RS12880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12880;pseudo=true NZ_CP006568.1 Protein Homology CDS 2528586 2530048 . - 0 ID=cds2579;Parent=gene2616;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2530145 2531158 . - . ID=gene2617;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=SOPEG_RS12885;old_locus_tag=SOPEG_2401 NZ_CP006568.1 Protein Homology CDS 2530145 2531158 . - 0 ID=cds2580;Parent=gene2617;Dbxref=Genbank:WP_025245657.1;Name=WP_025245657.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate--protein ligase;protein_id=WP_025245657.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2531180 2531638 . - . ID=gene2618;Name=SOPEG_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12890;old_locus_tag=SOPEG_2402 NZ_CP006568.1 Protein Homology CDS 2531180 2531638 . - 0 ID=cds2581;Parent=gene2618;Dbxref=Genbank:WP_025245658.1;Name=WP_025245658.1;gbkey=CDS;product=endopeptidase;protein_id=WP_025245658.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2531655 2532113 . - . ID=gene2619;Name=SOPEG_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12895 NZ_CP006568.1 Protein Homology CDS 2531655 2532113 . - 0 ID=cds2582;Parent=gene2619;Dbxref=Genbank:WP_025245659.1;Name=WP_025245659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245659.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2532117 2532662 . - . ID=gene2620;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=SOPEG_RS12900;old_locus_tag=SOPEG_2404 NZ_CP006568.1 Protein Homology CDS 2532117 2532662 . - 0 ID=cds2583;Parent=gene2620;Dbxref=Genbank:WP_025245660.1;Name=WP_025245660.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_025245660.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2532708 2533223 . - . ID=gene2621;Name=SOPEG_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12905 NZ_CP006568.1 Protein Homology CDS 2532708 2533223 . - 0 ID=cds2584;Parent=gene2621;Dbxref=Genbank:WP_025245661.1;Name=WP_025245661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245661.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2533287 2533619 . - . ID=gene2622;Name=SOPEG_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12910 NZ_CP006568.1 GeneMarkS+ CDS 2533287 2533619 . - 0 ID=cds2585;Parent=gene2622;Dbxref=Genbank:WP_025245662.1;Name=WP_025245662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245662.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2533909 2534121 . - . ID=gene2623;Name=SOPEG_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12915 NZ_CP006568.1 GeneMarkS+ CDS 2533909 2534121 . - 0 ID=cds2586;Parent=gene2623;Dbxref=Genbank:WP_025245663.1;Name=WP_025245663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2534581 2534877 . - . ID=gene2624;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=SOPEG_RS12920;old_locus_tag=SOPEG_2406 NZ_CP006568.1 Protein Homology CDS 2534581 2534877 . - 0 ID=cds2587;Parent=gene2624;Dbxref=Genbank:WP_011411244.1;Name=WP_011411244.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_011411244.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2534882 2537269 . - . ID=gene2625;Name=SOPEG_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12925;old_locus_tag=SOPEG_2407 NZ_CP006568.1 Protein Homology CDS 2534882 2537269 . - 0 ID=cds2588;Parent=gene2625;Dbxref=Genbank:WP_025245664.1;Name=WP_025245664.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_025245664.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2537285 2538268 . - . ID=gene2626;Name=SOPEG_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12930;old_locus_tag=SOPEG_2408 NZ_CP006568.1 Protein Homology CDS 2537285 2538268 . - 0 ID=cds2589;Parent=gene2626;Dbxref=Genbank:WP_025245665.1;Name=WP_025245665.1;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=WP_025245665.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2538557 2538913 . - . ID=gene2627;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SOPEG_RS12935;old_locus_tag=SOPEG_2409 NZ_CP006568.1 Protein Homology CDS 2538557 2538913 . - 0 ID=cds2590;Parent=gene2627;Dbxref=Genbank:WP_025245666.1;Name=WP_025245666.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_025245666.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2538957 2539154 . - . ID=gene2628;Name=SOPEG_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12940;old_locus_tag=SOPEG_2410 NZ_CP006568.1 Protein Homology CDS 2538957 2539154 . - 0 ID=cds2591;Parent=gene2628;Dbxref=Genbank:WP_025245667.1;Name=WP_025245667.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_025245667.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2539227 2539568 . - . ID=gene2629;Name=SOPEG_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12945 NZ_CP006568.1 Protein Homology CDS 2539227 2539568 . - 0 ID=cds2592;Parent=gene2629;Dbxref=Genbank:WP_025245668.1;Name=WP_025245668.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_025245668.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2539773 2541701 . - . ID=gene2630;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SOPEG_RS12950;old_locus_tag=SOPEG_2412 NZ_CP006568.1 Protein Homology CDS 2539773 2541701 . - 0 ID=cds2593;Parent=gene2630;Dbxref=Genbank:WP_025245669.1;Name=WP_025245669.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=WP_025245669.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2542240 2542509 . + . ID=gene2631;Name=SOPEG_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23035 NZ_CP006568.1 Protein Homology CDS 2542240 2542509 . + 0 ID=cds2594;Parent=gene2631;Dbxref=Genbank:WP_051419686.1;Name=WP_051419686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419686.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2542524 2542778 . + . ID=gene2632;Name=SOPEG_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23040 NZ_CP006568.1 Protein Homology CDS 2542524 2542778 . + 0 ID=cds2595;Parent=gene2632;Dbxref=Genbank:WP_025245671.1;Name=WP_025245671.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245671.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2543003 2543881 . - . ID=gene2633;Name=SOPEG_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12960;old_locus_tag=SOPEG_2414 NZ_CP006568.1 Protein Homology CDS 2543003 2543881 . - 0 ID=cds2596;Parent=gene2633;Dbxref=Genbank:WP_025245672.1;Name=WP_025245672.1;gbkey=CDS;product=3-beta hydroxysteroid dehydrogenase;protein_id=WP_025245672.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2543985 2544788 . + . ID=gene2634;Name=SOPEG_RS12965;end_range=2544788,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12965;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2543985 2544788 . + 0 ID=cds2597;Parent=gene2634;end_range=2544788,.;gbkey=CDS;partial=true;product=XRE family transcriptional regulator;pseudo=true;transl_except=(pos:2544147..2544149%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2545125 2545940 . + . ID=gene2635;Name=SOPEG_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12970 NZ_CP006568.1 Protein Homology CDS 2545125 2545940 . + 0 ID=cds2598;Parent=gene2635;Dbxref=Genbank:WP_038468747.1;Name=WP_038468747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468747.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2546318 2548003 . - . ID=gene2636;Name=SOPEG_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12975 NZ_CP006568.1 Protein Homology CDS 2546318 2548003 . - 0 ID=cds2599;Parent=gene2636;Dbxref=Genbank:WP_025245674.1;Name=WP_025245674.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245674.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2548022 2549083 . + . ID=id372;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2548100 2549023 . + . ID=gene2637;Name=SOPEG_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12980;old_locus_tag=SOPEG_2418 NZ_CP006568.1 Protein Homology CDS 2548100 2549023 . + 0 ID=cds2600;Parent=gene2637;Dbxref=Genbank:WP_025245675.1;Name=WP_025245675.1;gbkey=CDS;product=transposase;protein_id=WP_025245675.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2549862 2550158 . - . ID=gene2638;Name=SOPEG_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12985 NZ_CP006568.1 GeneMarkS+ CDS 2549862 2550158 . - 0 ID=cds2601;Parent=gene2638;Dbxref=Genbank:WP_025245677.1;Name=WP_025245677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245677.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2550461 2551333 . + . ID=gene2639;Name=SOPEG_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS12990;old_locus_tag=SOPEG_2419 NZ_CP006568.1 Protein Homology CDS 2550461 2551333 . + 0 ID=cds2602;Parent=gene2639;Dbxref=Genbank:WP_025245678.1;Name=WP_025245678.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245678.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2551330 2551878 . - . ID=gene2640;Name=SOPEG_RS12995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS12995;pseudo=true NZ_CP006568.1 Protein Homology CDS 2551330 2551878 . - 0 ID=cds2603;Parent=gene2640;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2551648..2551650)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2552084 2552821 . + . ID=gene2641;Name=SOPEG_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13000 NZ_CP006568.1 Protein Homology CDS 2552084 2552821 . + 0 ID=cds2604;Parent=gene2641;Dbxref=Genbank:WP_025245679.1;Name=WP_025245679.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_025245679.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2552713 2553054 . - . ID=gene2642;Name=SOPEG_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13005;old_locus_tag=SOPEG_2422 NZ_CP006568.1 Protein Homology CDS 2552713 2553054 . - 0 ID=cds2605;Parent=gene2642;Dbxref=Genbank:WP_025245680.1;Name=WP_025245680.1;gbkey=CDS;product=pectin degradation protein;protein_id=WP_025245680.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2553429 2557450 . + . ID=id373;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2553634 2554632 . + . ID=gene2643;Name=SOPEG_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23045 NZ_CP006568.1 Protein Homology CDS 2553634 2554632 . + 0 ID=cds2606;Parent=gene2643;Dbxref=Genbank:WP_051419693.1;Name=WP_051419693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419693.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2554878 2555072 . + . ID=gene2644;Name=SOPEG_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23050 NZ_CP006568.1 Protein Homology CDS 2554878 2555072 . + 0 ID=cds2607;Parent=gene2644;Dbxref=Genbank:WP_051419695.1;Name=WP_051419695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419695.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2555163 2555912 . + . ID=gene2645;Name=SOPEG_RS13015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13015;pseudo=true NZ_CP006568.1 Protein Homology CDS 2555163 2555912 . + 0 ID=cds2608;Parent=gene2645;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2555349..2555351%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2556016 2557224 . - . ID=gene2646;Name=SOPEG_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13020;old_locus_tag=SOPEG_2426 NZ_CP006568.1 Protein Homology CDS 2556016 2557224 . - 0 ID=cds2609;Parent=gene2646;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2557339 2557608 . + . ID=gene2647;Name=SOPEG_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13025 NZ_CP006568.1 GeneMarkS+ CDS 2557339 2557608 . + 0 ID=cds2610;Parent=gene2647;Dbxref=Genbank:WP_025245681.1;Name=WP_025245681.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245681.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2557765 2557977 . - . ID=gene2648;Name=SOPEG_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13030;old_locus_tag=SOPEG_2429 NZ_CP006568.1 Protein Homology CDS 2557765 2557977 . - 0 ID=cds2611;Parent=gene2648;Dbxref=Genbank:WP_025245682.1;Name=WP_025245682.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245682.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2558033 2559880 . + . ID=id374;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2558326 2559221 . - . ID=gene2649;Name=SOPEG_RS13035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13035;pseudo=true NZ_CP006568.1 Protein Homology CDS 2558326 2559221 . - 0 ID=cds2612;Parent=gene2649;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2559526 2560173 . + . ID=gene2650;Name=SOPEG_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13040;pseudo=true NZ_CP006568.1 Protein Homology CDS 2559526 2560173 . + 0 ID=cds2613;Parent=gene2650;gbkey=CDS;product=short-chain dehydrogenase;pseudo=true;transl_except=(pos:2560027..2560029%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2559890 2567543 . + . ID=id375;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2560278 2561666 . - . ID=gene2651;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=SOPEG_RS13045;old_locus_tag=SOPEG_2432 NZ_CP006568.1 Protein Homology CDS 2560278 2561666 . - 0 ID=cds2614;Parent=gene2651;Dbxref=Genbank:WP_025245683.1;Name=WP_025245683.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_025245683.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2561677 2563209 . - . ID=gene2652;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=SOPEG_RS13050;old_locus_tag=SOPEG_2433 NZ_CP006568.1 Protein Homology CDS 2561677 2563209 . - 0 ID=cds2615;Parent=gene2652;Dbxref=Genbank:WP_025245684.1;Name=WP_025245684.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_025245684.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2563460 2564383 . - . ID=gene2653;Name=SOPEG_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13055;old_locus_tag=SOPEG_2434 NZ_CP006568.1 Protein Homology CDS 2563460 2564383 . - 0 ID=cds2616;Parent=gene2653;Dbxref=Genbank:WP_025245685.1;Name=WP_025245685.1;gbkey=CDS;product=transposase;protein_id=WP_025245685.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2564577 2565530 . + . ID=gene2654;Name=SOPEG_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13060;old_locus_tag=SOPEG_2435 NZ_CP006568.1 Protein Homology CDS 2564577 2565530 . + 0 ID=cds2617;Parent=gene2654;Dbxref=Genbank:WP_025245686.1;Name=WP_025245686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245686.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2565678 2566103 . - . ID=gene2655;Name=SOPEG_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13065;old_locus_tag=SOPEG_2436 NZ_CP006568.1 Protein Homology CDS 2565678 2566103 . - 0 ID=cds2618;Parent=gene2655;Dbxref=Genbank:WP_025245687.1;Name=WP_025245687.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245687.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2566380 2567107 . + . ID=gene2656;Name=SOPEG_RS13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13070;old_locus_tag=SOPEG_2437;pseudo=true NZ_CP006568.1 Protein Homology CDS 2566380 2567107 . + 0 ID=cds2619;Parent=gene2656;Note=response regulator in two-component regulatory system with RstB;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2567104 2568402 . + . ID=gene2657;Name=SOPEG_RS13075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13075;pseudo=true NZ_CP006568.1 Protein Homology CDS 2567104 2568402 . + 0 ID=cds2620;Parent=gene2657;gbkey=CDS;product=sensor protein RstB;pseudo=true;transl_except=(pos:2568136..2568138%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2567550 2570040 . + . ID=id376;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2568754 2569068 . + . ID=gene2658;Name=SOPEG_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13080;old_locus_tag=SOPEG_2439 NZ_CP006568.1 Protein Homology CDS 2568754 2569068 . + 0 ID=cds2621;Parent=gene2658;Dbxref=Genbank:WP_025245688.1;Name=WP_025245688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245688.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2569436 2570235 . + . ID=gene2659;Name=SOPEG_RS13085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13085;pseudo=true NZ_CP006568.1 Protein Homology CDS 2569436 2570235 . + 0 ID=cds2622;Parent=gene2659;exception=annotated by transcript or proteomic data;gbkey=CDS;product=serine protease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2570045 2575005 . + . ID=id377;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2570287 2574147 . - . ID=gene2660;Name=SOPEG_RS13090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13090;pseudo=true NZ_CP006568.1 Protein Homology CDS 2570287 2574147 . - 0 ID=cds2623;Parent=gene2660;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-dependent helicase HrpA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2574372 2574782 . + . ID=gene2661;Name=SOPEG_RS13095;end_range=2574782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13095;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2574372 2574782 . + 0 ID=cds2624;Parent=gene2661;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;end_range=2574782,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=FMN-dependent NADH-azoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2574975 2576006 . - . ID=gene2662;Name=SOPEG_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23055 NZ_CP006568.1 Protein Homology CDS 2574975 2576006 . - 0 ID=cds2625;Parent=gene2662;Dbxref=Genbank:WP_051419697.1;Name=WP_051419697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419697.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2575267 2575714 . + . ID=id378;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 2575996 2576100 . + . ID=id379;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 2576130 2577256 . + . ID=id380;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2576167 2577159 . - . ID=gene2663;Name=SOPEG_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23060 NZ_CP006568.1 Protein Homology CDS 2576167 2577159 . - 0 ID=cds2626;Parent=gene2663;Dbxref=Genbank:WP_051419700.1;Name=WP_051419700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419700.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2577154 2577486 . + . ID=gene2664;Name=SOPEG_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23065;old_locus_tag=SOPEG_ps2444 NZ_CP006568.1 GeneMarkS+ CDS 2577154 2577486 . + 0 ID=cds2627;Parent=gene2664;Dbxref=Genbank:WP_051419702.1;Name=WP_051419702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419702.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2577258 2578668 . + . ID=id381;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2577530 2578517 . + . ID=gene2665;Name=SOPEG_RS13105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13105;pseudo=true NZ_CP006568.1 Protein Homology CDS 2577530 2578517 . + 0 ID=cds2628;Parent=gene2665;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lactate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2578746 2578994 . - . ID=gene2666;Name=SOPEG_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13110 NZ_CP006568.1 Protein Homology CDS 2578746 2578994 . - 0 ID=cds2629;Parent=gene2666;Dbxref=Genbank:WP_025245689.1;Name=WP_025245689.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245689.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2578846 2581766 . + . ID=id382;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2579227 2579529 . + . ID=gene2667;Name=SOPEG_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13115 NZ_CP006568.1 GeneMarkS+ CDS 2579227 2579529 . + 0 ID=cds2630;Parent=gene2667;Dbxref=Genbank:WP_038468752.1;Name=WP_038468752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468752.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2579607 2582758 . + . ID=gene2668;Name=SOPEG_RS13120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13120;pseudo=true NZ_CP006568.1 Protein Homology CDS 2579607 2582758 . + 0 ID=cds2631;Parent=gene2668;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2581821 2586964 . + . ID=id383;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2583427 2583981 . + . ID=gene2669;Name=SOPEG_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13125 NZ_CP006568.1 GeneMarkS+ CDS 2583427 2583981 . + 0 ID=cds2632;Parent=gene2669;Dbxref=Genbank:WP_025245690.1;Name=WP_025245690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245690.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2583975 2585285 . + . ID=gene2670;Name=SOPEG_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13130 NZ_CP006568.1 Protein Homology CDS 2583975 2585285 . + 0 ID=cds2633;Parent=gene2670;Dbxref=Genbank:WP_038468755.1;Name=WP_038468755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468755.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2585467 2587452 . - . ID=gene2671;Name=SOPEG_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13135;old_locus_tag=SOPEG_2449 NZ_CP006568.1 Protein Homology CDS 2585467 2587452 . - 0 ID=cds2634;Parent=gene2671;Dbxref=Genbank:WP_025245692.1;Name=WP_025245692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245692.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2587029 2588717 . + . ID=id384;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2588046 2588993 . + . ID=gene2672;Name=SOPEG_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13140;old_locus_tag=SOPEG_2450 NZ_CP006568.1 Protein Homology CDS 2588046 2588993 . + 0 ID=cds2635;Parent=gene2672;Dbxref=Genbank:WP_038468758.1;Name=WP_038468758.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_038468758.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2589779 2590762 . - . ID=gene2673;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=SOPEG_RS13145;old_locus_tag=SOPEG_2451 NZ_CP006568.1 Protein Homology CDS 2589779 2590762 . - 0 ID=cds2636;Parent=gene2673;Dbxref=Genbank:WP_025245694.1;Name=WP_025245694.1;gbkey=CDS;gene=zntB;product=zinc transporter;protein_id=WP_025245694.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2590824 2591501 . - . ID=gene2674;Name=SOPEG_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23070;old_locus_tag=SOPEG_ps2452 NZ_CP006568.1 Protein Homology CDS 2590824 2591501 . - 0 ID=cds2637;Parent=gene2674;Dbxref=Genbank:WP_025245695.1;Name=WP_025245695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245695.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2592175 2592459 . + . ID=gene2675;Name=SOPEG_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13155 NZ_CP006568.1 Protein Homology CDS 2592175 2592459 . + 0 ID=cds2638;Parent=gene2675;Dbxref=Genbank:WP_025245696.1;Name=WP_025245696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245696.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2592442 2593842 . + . ID=id385;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2592501 2593424 . - . ID=gene2676;Name=SOPEG_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13160;old_locus_tag=SOPEG_2454 NZ_CP006568.1 Protein Homology CDS 2592501 2593424 . - 0 ID=cds2639;Parent=gene2676;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2593588 2593839 . - . ID=gene2677;Name=SOPEG_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13165 NZ_CP006568.1 GeneMarkS+ CDS 2593588 2593839 . - 0 ID=cds2640;Parent=gene2677;Dbxref=Genbank:WP_025245697.1;Name=WP_025245697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245697.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2593876 2594478 . - . ID=gene2678;Name=SOPEG_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13170;old_locus_tag=SOPEG_2455 NZ_CP006568.1 Protein Homology CDS 2593876 2594478 . - 0 ID=cds2641;Parent=gene2678;Dbxref=Genbank:WP_025245698.1;Name=WP_025245698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245698.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2594507 2595178 . - . ID=gene2679;Name=SOPEG_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13175;old_locus_tag=SOPEG_2456 NZ_CP006568.1 Protein Homology CDS 2594507 2595178 . - 0 ID=cds2642;Parent=gene2679;Dbxref=Genbank:WP_051419703.1;Name=WP_051419703.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419703.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2595293 2595487 . - . ID=gene2680;Name=SOPEG_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13180 NZ_CP006568.1 GeneMarkS+ CDS 2595293 2595487 . - 0 ID=cds2643;Parent=gene2680;Dbxref=Genbank:WP_025245700.1;Name=WP_025245700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245700.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2595492 2595605 . + . ID=id386;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2595553 2596023 . + . ID=gene2681;Name=SOPEG_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13185;old_locus_tag=SOPEG_2457 NZ_CP006568.1 Protein Homology CDS 2595553 2596023 . + 0 ID=cds2644;Parent=gene2681;Dbxref=Genbank:WP_025245701.1;Name=WP_025245701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245701.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2596037 2597345 . + . ID=id387;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2596114 2596353 . + . ID=gene2682;Name=SOPEG_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13190 NZ_CP006568.1 Protein Homology CDS 2596114 2596353 . + 0 ID=cds2645;Parent=gene2682;Dbxref=Genbank:WP_038468763.1;Name=WP_038468763.1;gbkey=CDS;product=transposase;protein_id=WP_038468763.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2596406 2597308 . + . ID=gene2683;Name=SOPEG_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13195 NZ_CP006568.1 Protein Homology CDS 2596406 2597308 . + 0 ID=cds2646;Parent=gene2683;Dbxref=Genbank:WP_038468766.1;Name=WP_038468766.1;gbkey=CDS;product=transposase;protein_id=WP_038468766.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2597458 2598150 . - . ID=gene2684;Name=SOPEG_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13200;old_locus_tag=SOPEG_2459 NZ_CP006568.1 Protein Homology CDS 2597458 2598150 . - 0 ID=cds2647;Parent=gene2684;Dbxref=Genbank:WP_025245702.1;Name=WP_025245702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245702.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2598299 2598823 . + . ID=gene2685;Name=SOPEG_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13205 NZ_CP006568.1 Protein Homology CDS 2598299 2598823 . + 0 ID=cds2648;Parent=gene2685;Dbxref=Genbank:WP_025245703.1;Name=WP_025245703.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245703.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2599122 2601618 . + . ID=id388;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2599196 2600128 . + . ID=gene2686;Name=SOPEG_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13210 NZ_CP006568.1 Protein Homology CDS 2599196 2600128 . + 0 ID=cds2649;Parent=gene2686;Dbxref=Genbank:WP_051419705.1;Name=WP_051419705.1;gbkey=CDS;product=transposase;protein_id=WP_051419705.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2600186 2600404 . + . ID=gene2687;Name=SOPEG_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13215 NZ_CP006568.1 Protein Homology CDS 2600186 2600404 . + 0 ID=cds2650;Parent=gene2687;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2600661 2601536 . - . ID=gene2688;Name=SOPEG_RS13220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13220;partial=true;pseudo=true;start_range=.,2600661 NZ_CP006568.1 Protein Homology CDS 2600661 2601536 . - 0 ID=cds2651;Parent=gene2688;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2600661;transl_table=11 NZ_CP006568.1 RefSeq gene 2601751 2602032 . + . ID=gene2689;Name=SOPEG_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13225 NZ_CP006568.1 GeneMarkS+ CDS 2601751 2602032 . + 0 ID=cds2652;Parent=gene2689;Dbxref=Genbank:WP_025245705.1;Name=WP_025245705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245705.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2602035 2603355 . + . ID=id389;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2602110 2603318 . + . ID=gene2690;Name=SOPEG_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13230;old_locus_tag=SOPEG_2463 NZ_CP006568.1 Protein Homology CDS 2602110 2603318 . + 0 ID=cds2653;Parent=gene2690;Dbxref=Genbank:WP_025245706.1;Name=WP_025245706.1;gbkey=CDS;product=transposase;protein_id=WP_025245706.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2603720 2606102 . + . ID=id390;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2603757 2604089 . - . ID=gene2691;Name=SOPEG_RS13235;end_range=2604089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13235;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2603757 2604089 . - 0 ID=cds2654;Parent=gene2691;end_range=2604089,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2604137 2605060 . + . ID=gene2692;Name=SOPEG_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13240;old_locus_tag=SOPEG_2465 NZ_CP006568.1 Protein Homology CDS 2604137 2605060 . + 0 ID=cds2655;Parent=gene2692;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2605102 2606028 . - . ID=gene2693;Name=SOPEG_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13245 NZ_CP006568.1 Protein Homology CDS 2605102 2606028 . - 0 ID=cds2656;Parent=gene2693;Dbxref=Genbank:WP_038468769.1;Name=WP_038468769.1;gbkey=CDS;product=transposase;protein_id=WP_038468769.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2606105 2610845 . + . ID=id391;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2606330 2607259 . - . ID=gene2694;Name=SOPEG_RS13250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13250;pseudo=true NZ_CP006568.1 Protein Homology CDS 2606330 2607259 . - 0 ID=cds2657;Parent=gene2694;gbkey=CDS;product=XRE family transcriptional regulator;pseudo=true;transl_except=(pos:complement(2607206..2607208)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2607447 2608370 . + . ID=gene2695;Name=SOPEG_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13255;old_locus_tag=SOPEG_2467 NZ_CP006568.1 Protein Homology CDS 2607447 2608370 . + 0 ID=cds2658;Parent=gene2695;Dbxref=Genbank:WP_025245708.1;Name=WP_025245708.1;gbkey=CDS;product=transposase;protein_id=WP_025245708.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2608363 2610294 . - . ID=gene2696;Name=SOPEG_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13260 NZ_CP006568.1 Protein Homology CDS 2608363 2610294 . - 0 ID=cds2659;Parent=gene2696;Dbxref=Genbank:WP_051419707.1;Name=WP_051419707.1;gbkey=CDS;product=transposase;protein_id=WP_051419707.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2610522 2610866 . + . ID=gene2697;Name=SOPEG_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13265 NZ_CP006568.1 GeneMarkS+ CDS 2610522 2610866 . + 0 ID=cds2660;Parent=gene2697;Dbxref=Genbank:WP_025245710.1;Name=WP_025245710.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245710.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2610853 2614043 . + . ID=id392;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2610912 2611835 . - . ID=gene2698;Name=SOPEG_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13270;old_locus_tag=SOPEG_2470 NZ_CP006568.1 Protein Homology CDS 2610912 2611835 . - 0 ID=cds2661;Parent=gene2698;Dbxref=Genbank:WP_025243983.1;Name=WP_025243983.1;gbkey=CDS;product=transposase;protein_id=WP_025243983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2611862 2612464 . + . ID=gene2699;Name=SOPEG_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13275 NZ_CP006568.1 Protein Homology CDS 2611862 2612464 . + 0 ID=cds2662;Parent=gene2699;Dbxref=Genbank:WP_025245711.1;Name=WP_025245711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245711.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2612557 2613765 . + . ID=gene2700;Name=SOPEG_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13280;old_locus_tag=SOPEG_2472 NZ_CP006568.1 Protein Homology CDS 2612557 2613765 . + 0 ID=cds2663;Parent=gene2700;Dbxref=Genbank:WP_025245712.1;Name=WP_025245712.1;gbkey=CDS;product=transposase;protein_id=WP_025245712.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2614214 2614922 . - . ID=gene2701;Name=SOPEG_RS13285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13285;pseudo=true NZ_CP006568.1 Protein Homology CDS 2614214 2614922 . - 0 ID=cds2664;Parent=gene2701;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2615533 2615727 . + . ID=gene2702;Name=SOPEG_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13290 NZ_CP006568.1 GeneMarkS+ CDS 2615533 2615727 . + 0 ID=cds2665;Parent=gene2702;Dbxref=Genbank:WP_025245713.1;Name=WP_025245713.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245713.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2616226 2617322 . + . ID=gene2703;Name=SOPEG_RS13295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13295;pseudo=true NZ_CP006568.1 Protein Homology CDS 2616226 2617322 . + 0 ID=cds2666;Parent=gene2703;exception=annotated by transcript or proteomic data;gbkey=CDS;product=calcium:proton antiporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2617483 2619121 . + . ID=gene2704;Name=SOPEG_RS13300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13300;pseudo=true NZ_CP006568.1 Protein Homology CDS 2617483 2619121 . + 0 ID=cds2667;Parent=gene2704;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_except=(pos:2617778..2617780%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2619173 2620027 . - . ID=gene2705;Name=SOPEG_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13305;old_locus_tag=SOPEG_2477 NZ_CP006568.1 Protein Homology CDS 2619173 2620027 . - 0 ID=cds2668;Parent=gene2705;Dbxref=Genbank:WP_025245714.1;Name=WP_025245714.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_025245714.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2620070 2620819 . - . ID=gene2706;Name=SOPEG_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13310 NZ_CP006568.1 Protein Homology CDS 2620070 2620819 . - 0 ID=cds2669;Parent=gene2706;Dbxref=Genbank:WP_025245715.1;Name=WP_025245715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245715.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2621064 2621912 . - . ID=gene2707;Name=SOPEG_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13315;old_locus_tag=SOPEG_2479 NZ_CP006568.1 Protein Homology CDS 2621064 2621912 . - 0 ID=cds2670;Parent=gene2707;Dbxref=Genbank:WP_025245716.1;Name=WP_025245716.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_025245716.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2621912 2622994 . - . ID=gene2708;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SOPEG_RS13320;old_locus_tag=SOPEG_2480 NZ_CP006568.1 Protein Homology CDS 2621912 2622994 . - 0 ID=cds2671;Parent=gene2708;Dbxref=Genbank:WP_025245717.1;Name=WP_025245717.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_025245717.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2623020 2624282 . - . ID=gene2709;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=SOPEG_RS13325;old_locus_tag=SOPEG_2481 NZ_CP006568.1 Protein Homology CDS 2623020 2624282 . - 0 ID=cds2672;Parent=gene2709;Dbxref=Genbank:WP_025245718.1;Name=WP_025245718.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_025245718.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2624506 2625126 . + . ID=gene2710;Name=SOPEG_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13330;old_locus_tag=SOPEG_2482 NZ_CP006568.1 Protein Homology CDS 2624506 2625126 . + 0 ID=cds2673;Parent=gene2710;Dbxref=Genbank:WP_025245719.1;Name=WP_025245719.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_025245719.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2625126 2625983 . + . ID=gene2711;Name=SOPEG_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13335;old_locus_tag=SOPEG_2483 NZ_CP006568.1 Protein Homology CDS 2625126 2625983 . + 0 ID=cds2674;Parent=gene2711;Dbxref=Genbank:WP_025245720.1;Name=WP_025245720.1;gbkey=CDS;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_025245720.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2626031 2627050 . + . ID=gene2712;Name=SOPEG_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13340;old_locus_tag=SOPEG_2484 NZ_CP006568.1 Protein Homology CDS 2626031 2627050 . + 0 ID=cds2675;Parent=gene2712;Dbxref=Genbank:WP_038470148.1;Name=WP_038470148.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_038470148.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2627371 2627649 . - . ID=gene2713;Name=SOPEG_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13345;old_locus_tag=SOPEG_2485 NZ_CP006568.1 Protein Homology CDS 2627371 2627649 . - 0 ID=cds2676;Parent=gene2713;Dbxref=Genbank:WP_025245722.1;Name=WP_025245722.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245722.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2627890 2628474 . + . ID=gene2714;Name=SOPEG_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13350;old_locus_tag=SOPEG_2486 NZ_CP006568.1 Protein Homology CDS 2627890 2628474 . + 0 ID=cds2677;Parent=gene2714;Dbxref=Genbank:WP_025245723.1;Name=WP_025245723.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_025245723.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2628589 2629680 . + . ID=gene2715;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SOPEG_RS13355;old_locus_tag=SOPEG_2487 NZ_CP006568.1 Protein Homology CDS 2628589 2629680 . + 0 ID=cds2678;Parent=gene2715;Dbxref=Genbank:WP_025245724.1;Name=WP_025245724.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_025245724.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2629822 2631148 . + . ID=id393;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2629899 2630298 . + . ID=gene2716;Name=SOPEG_RS13360;end_range=2630298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13360;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2629899 2630298 . + 0 ID=cds2679;Parent=gene2716;end_range=2630298,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2631507 2634899 . + . ID=gene2717;Name=SOPEG_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13365;old_locus_tag=SOPEG_2489 NZ_CP006568.1 GeneMarkS+ CDS 2631507 2634899 . + 0 ID=cds2680;Parent=gene2717;Dbxref=Genbank:WP_025245725.1;Name=WP_025245725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245725.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2635858 2636040 . - . ID=gene2718;Name=SOPEG_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13370 NZ_CP006568.1 Protein Homology CDS 2635858 2636040 . - 0 ID=cds2681;Parent=gene2718;Dbxref=Genbank:WP_025245726.1;Name=WP_025245726.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245726.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2636025 2636684 . - . ID=gene2719;Name=SOPEG_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13375 NZ_CP006568.1 Protein Homology CDS 2636025 2636684 . - 0 ID=cds2682;Parent=gene2719;Dbxref=Genbank:WP_025245727.1;Name=WP_025245727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245727.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2636681 2637025 . - . ID=gene2720;Name=SOPEG_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13380;old_locus_tag=SOPEG_2491 NZ_CP006568.1 Protein Homology CDS 2636681 2637025 . - 0 ID=cds2683;Parent=gene2720;Dbxref=Genbank:WP_025245728.1;Name=WP_025245728.1;gbkey=CDS;product=cupin;protein_id=WP_025245728.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2637329 2637865 . + . ID=gene2721;Name=SOPEG_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13385 NZ_CP006568.1 Protein Homology CDS 2637329 2637865 . + 0 ID=cds2684;Parent=gene2721;Dbxref=Genbank:WP_051419708.1;Name=WP_051419708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419708.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2637912 2639369 . - . ID=gene2722;Name=SOPEG_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13390 NZ_CP006568.1 Protein Homology CDS 2637912 2639369 . - 0 ID=cds2685;Parent=gene2722;Dbxref=Genbank:WP_025245729.1;Name=WP_025245729.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245729.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2639673 2640272 . - . ID=gene2723;Name=SOPEG_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13395;old_locus_tag=SOPEG_2494 NZ_CP006568.1 Protein Homology CDS 2639673 2640272 . - 0 ID=cds2686;Parent=gene2723;Dbxref=Genbank:WP_025245730.1;Name=WP_025245730.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245730.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2640453 2640686 . + . ID=gene2724;Name=SOPEG_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13400;old_locus_tag=SOPEG_2495 NZ_CP006568.1 Protein Homology CDS 2640453 2640686 . + 0 ID=cds2687;Parent=gene2724;Dbxref=Genbank:WP_038470154.1;Name=WP_038470154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038470154.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2640689 2642733 . + . ID=gene2725;Name=SOPEG_RS13405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13405;pseudo=true NZ_CP006568.1 Protein Homology CDS 2640689 2642733 . + 0 ID=cds2688;Parent=gene2725;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:2642116..2642118%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2642745 2643678 . + . ID=gene2726;Name=SOPEG_RS13410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13410;pseudo=true NZ_CP006568.1 Protein Homology CDS 2642745 2643678 . + 0 ID=cds2689;Parent=gene2726;exception=annotated by transcript or proteomic data;gbkey=CDS;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2643578 2647338 . + . ID=id394;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2644040 2645110 . + . ID=gene2727;Name=SOPEG_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13415 NZ_CP006568.1 Protein Homology CDS 2644040 2645110 . + 0 ID=cds2690;Parent=gene2727;Dbxref=Genbank:WP_025245735.1;Name=WP_025245735.1;gbkey=CDS;product=transposase;protein_id=WP_025245735.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2645172 2645390 . - . ID=gene2728;Name=SOPEG_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13420 NZ_CP006568.1 Protein Homology CDS 2645172 2645390 . - 0 ID=cds2691;Parent=gene2728;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2645448 2646380 . - . ID=gene2729;Name=SOPEG_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13425 NZ_CP006568.1 Protein Homology CDS 2645448 2646380 . - 0 ID=cds2692;Parent=gene2729;Dbxref=Genbank:WP_051419705.1;Name=WP_051419705.1;gbkey=CDS;product=transposase;protein_id=WP_051419705.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2646512 2647276 . + . ID=gene2730;Name=SOPEG_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13430 NZ_CP006568.1 Protein Homology CDS 2646512 2647276 . + 0 ID=cds2693;Parent=gene2730;Dbxref=Genbank:WP_025245736.1;Name=WP_025245736.1;gbkey=CDS;product=transposase;protein_id=WP_025245736.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2647423 2647650 . + . ID=gene2731;Name=SOPEG_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23075;old_locus_tag=SOPEG_ps2502 NZ_CP006568.1 Protein Homology CDS 2647423 2647650 . + 0 ID=cds2694;Parent=gene2731;Dbxref=Genbank:WP_051419710.1;Name=WP_051419710.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419710.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2647788 2648327 . - . ID=gene2732;Name=SOPEG_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13440 NZ_CP006568.1 Protein Homology CDS 2647788 2648327 . - 0 ID=cds2695;Parent=gene2732;Dbxref=Genbank:WP_051419712.1;Name=WP_051419712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419712.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2648467 2648973 . + . ID=gene2733;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SOPEG_RS13445;old_locus_tag=SOPEG_2504 NZ_CP006568.1 Protein Homology CDS 2648467 2648973 . + 0 ID=cds2696;Parent=gene2733;Dbxref=Genbank:WP_025245737.1;Name=WP_025245737.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=peroxidase;protein_id=WP_025245737.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2649160 2650731 . - . ID=gene2734;Name=SOPEG_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13450;old_locus_tag=SOPEG_2505 NZ_CP006568.1 Protein Homology CDS 2649160 2650731 . - 0 ID=cds2697;Parent=gene2734;Dbxref=Genbank:WP_025245738.1;Name=WP_025245738.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245738.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2650851 2651903 . - . ID=gene2735;Name=SOPEG_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13455;old_locus_tag=SOPEG_2506 NZ_CP006568.1 Protein Homology CDS 2650851 2651903 . - 0 ID=cds2698;Parent=gene2735;Dbxref=Genbank:WP_025245739.1;Name=WP_025245739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245739.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2651981 2652685 . - . ID=gene2736;Name=SOPEG_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13460 NZ_CP006568.1 Protein Homology CDS 2651981 2652685 . - 0 ID=cds2699;Parent=gene2736;Dbxref=Genbank:WP_051419714.1;Name=WP_051419714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419714.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2653222 2656125 . + . ID=id395;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2653298 2654407 . + . ID=gene2737;Name=SOPEG_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13465 NZ_CP006568.1 Protein Homology CDS 2653298 2654407 . + 0 ID=cds2700;Parent=gene2737;Dbxref=Genbank:WP_025245740.1;Name=WP_025245740.1;gbkey=CDS;product=transposase;protein_id=WP_025245740.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2654473 2654802 . - . ID=gene2738;Name=SOPEG_RS13470;end_range=2654802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13470;partial=true;pseudo=true;start_range=.,2654473 NZ_CP006568.1 Protein Homology CDS 2654473 2654802 . - 0 ID=cds2701;Parent=gene2738;end_range=2654802,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,2654473;transl_table=11 NZ_CP006568.1 RefSeq gene 2654842 2655825 . - . ID=gene2739;Name=SOPEG_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23080;old_locus_tag=SOPEG_ps2510 NZ_CP006568.1 Protein Homology CDS 2654842 2655825 . - 0 ID=cds2702;Parent=gene2739;Dbxref=Genbank:WP_051420006.1;Name=WP_051420006.1;gbkey=CDS;product=transposase;protein_id=WP_051420006.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2655781 2656050 . - . ID=gene2740;Name=SOPEG_RS13475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13475;partial=true;pseudo=true;start_range=.,2655781 NZ_CP006568.1 Protein Homology CDS 2655781 2656050 . - 0 ID=cds2703;Parent=gene2740;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2655781;transl_except=(pos:complement(2655892..2655894)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2656129 2656374 . + . ID=id396;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2656511 2657224 . + . ID=gene2741;Name=SOPEG_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13480 NZ_CP006568.1 Protein Homology CDS 2656511 2657224 . + 0 ID=cds2704;Parent=gene2741;Dbxref=Genbank:WP_051419715.1;Name=WP_051419715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419715.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2657435 2657839 . - . ID=gene2742;Name=SOPEG_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13485;old_locus_tag=SOPEG_2512 NZ_CP006568.1 Protein Homology CDS 2657435 2657839 . - 0 ID=cds2705;Parent=gene2742;Dbxref=Genbank:WP_025245742.1;Name=WP_025245742.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_025245742.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2657881 2658432 . - . ID=gene2743;Name=SOPEG_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13490;old_locus_tag=SOPEG_2513 NZ_CP006568.1 Protein Homology CDS 2657881 2658432 . - 0 ID=cds2706;Parent=gene2743;Dbxref=Genbank:WP_025245743.1;Name=WP_025245743.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_025245743.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2658469 2659224 . - . ID=gene2744;Name=SOPEG_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13495;old_locus_tag=SOPEG_2514 NZ_CP006568.1 Protein Homology CDS 2658469 2659224 . - 0 ID=cds2707;Parent=gene2744;Dbxref=Genbank:WP_025245744.1;Name=WP_025245744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245744.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2659279 2659689 . - . ID=gene2745;Name=SOPEG_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13500;old_locus_tag=SOPEG_2515 NZ_CP006568.1 Protein Homology CDS 2659279 2659689 . - 0 ID=cds2708;Parent=gene2745;Dbxref=Genbank:WP_025245745.1;Name=WP_025245745.1;gbkey=CDS;product=ferredoxin;protein_id=WP_025245745.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2659966 2660436 . + . ID=gene2746;Name=SOPEG_RS13505;end_range=2660436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13505;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2659966 2660436 . + 0 ID=cds2709;Parent=gene2746;Note=receptor for colicin S4;end_range=2660436,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2660433 2664354 . + . ID=id397;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2660639 2662156 . + . ID=gene2747;Name=SOPEG_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13510;old_locus_tag=SOPEG_2517 NZ_CP006568.1 Protein Homology CDS 2660639 2662156 . + 0 ID=cds2710;Parent=gene2747;Dbxref=Genbank:WP_038468778.1;Name=WP_038468778.1;gbkey=CDS;product=transposase;protein_id=WP_038468778.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2662168 2662917 . + . ID=gene2748;Name=SOPEG_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13515;old_locus_tag=SOPEG_2518 NZ_CP006568.1 Protein Homology CDS 2662168 2662917 . + 0 ID=cds2711;Parent=gene2748;Dbxref=Genbank:WP_025245747.1;Name=WP_025245747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245747.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2663108 2664316 . + . ID=gene2749;Name=SOPEG_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13520;old_locus_tag=SOPEG_2519 NZ_CP006568.1 Protein Homology CDS 2663108 2664316 . + 0 ID=cds2712;Parent=gene2749;Dbxref=Genbank:WP_025245748.1;Name=WP_025245748.1;gbkey=CDS;product=transposase;protein_id=WP_025245748.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2664396 2664702 . - . ID=gene2750;Name=SOPEG_RS13525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13525;pseudo=true NZ_CP006568.1 Protein Homology CDS 2664396 2664702 . - 0 ID=cds2713;Parent=gene2750;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2664810 2665616 . - . ID=gene2751;Name=SOPEG_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13530;old_locus_tag=SOPEG_2521 NZ_CP006568.1 Protein Homology CDS 2664810 2665616 . - 0 ID=cds2714;Parent=gene2751;Dbxref=Genbank:WP_025245749.1;Name=WP_025245749.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_025245749.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2665618 2666808 . - . ID=gene2752;Name=SOPEG_RS13535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13535;pseudo=true NZ_CP006568.1 Protein Homology CDS 2665618 2666808 . - 0 ID=cds2715;Parent=gene2752;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;pseudo=true;transl_except=(pos:complement(2666578..2666580)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2666842 2668184 . - . ID=gene2753;Name=SOPEG_RS13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13540;pseudo=true NZ_CP006568.1 Protein Homology CDS 2666842 2668184 . - 0 ID=cds2716;Parent=gene2753;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=indole-3-glycerol phosphate synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2668192 2669064 . - . ID=gene2754;Name=SOPEG_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13545 NZ_CP006568.1 Protein Homology CDS 2668192 2669064 . - 0 ID=cds2717;Parent=gene2754;Dbxref=Genbank:WP_025245750.1;Name=WP_025245750.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_025245750.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2669081 2669652 . - . ID=gene2755;Name=SOPEG_RS13550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13550;pseudo=true NZ_CP006568.1 Protein Homology CDS 2669081 2669652 . - 0 ID=cds2718;Parent=gene2755;exception=annotated by transcript or proteomic data;gbkey=CDS;product=anthranilate synthase subunit II;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2669652 2671198 . - . ID=gene2756;Name=SOPEG_RS13555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13555;pseudo=true NZ_CP006568.1 Protein Homology CDS 2669652 2671198 . - 0 ID=cds2719;Parent=gene2756;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=anthranilate synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2671539 2672426 . + . ID=gene2757;Name=SOPEG_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13560;old_locus_tag=SOPEG_2527 NZ_CP006568.1 Protein Homology CDS 2671539 2672426 . + 0 ID=cds2720;Parent=gene2757;Dbxref=Genbank:WP_038468781.1;Name=WP_038468781.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_038468781.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2672479 2673099 . + . ID=gene2758;Name=SOPEG_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13565;old_locus_tag=SOPEG_2528 NZ_CP006568.1 Protein Homology CDS 2672479 2673099 . + 0 ID=cds2721;Parent=gene2758;Dbxref=Genbank:WP_025245752.1;Name=WP_025245752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245752.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2673572 2674459 . + . ID=gene2759;Name=SOPEG_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13570;old_locus_tag=SOPEG_2529 NZ_CP006568.1 Protein Homology CDS 2673572 2674459 . + 0 ID=cds2722;Parent=gene2759;Dbxref=Genbank:WP_025245753.1;Name=WP_025245753.1;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase;protein_id=WP_025245753.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2674614 2675203 . - . ID=gene2760;Name=SOPEG_RS13575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13575;pseudo=true NZ_CP006568.1 Protein Homology CDS 2674614 2675203 . - 0 ID=cds2723;Parent=gene2760;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2675257 2676019 . - . ID=gene2761;Name=SOPEG_RS13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13580;pseudo=true NZ_CP006568.1 Protein Homology CDS 2675257 2676019 . - 0 ID=cds2724;Parent=gene2761;exception=annotated by transcript or proteomic data;gbkey=CDS;product=3-oxoacyl-ACP reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2676335 2677381 . + . ID=gene2762;Name=SOPEG_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13585;old_locus_tag=SOPEG_2532 NZ_CP006568.1 Protein Homology CDS 2676335 2677381 . + 0 ID=cds2725;Parent=gene2762;Dbxref=Genbank:WP_025245754.1;Name=WP_025245754.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_025245754.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2677857 2678108 . - . ID=gene2763;Name=SOPEG_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13590;old_locus_tag=SOPEG_2533 NZ_CP006568.1 Protein Homology CDS 2677857 2678108 . - 0 ID=cds2726;Parent=gene2763;Dbxref=Genbank:WP_025245755.1;Name=WP_025245755.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245755.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2678528 2681116 . + . ID=gene2764;Name=SOPEG_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13595;old_locus_tag=SOPEG_2534 NZ_CP006568.1 Protein Homology CDS 2678528 2681116 . + 0 ID=cds2727;Parent=gene2764;Dbxref=Genbank:WP_025245756.1;Name=WP_025245756.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_025245756.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2681315 2682289 . + . ID=gene2765;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=SOPEG_RS13600;old_locus_tag=SOPEG_2535 NZ_CP006568.1 Protein Homology CDS 2681315 2682289 . + 0 ID=cds2728;Parent=gene2765;Dbxref=Genbank:WP_025245757.1;Name=WP_025245757.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_025245757.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2682357 2682593 . + . ID=gene2766;Name=SOPEG_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13605 NZ_CP006568.1 GeneMarkS+ CDS 2682357 2682593 . + 0 ID=cds2729;Parent=gene2766;Dbxref=Genbank:WP_025245758.1;Name=WP_025245758.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245758.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2682649 2685323 . + . ID=gene2767;Name=SOPEG_RS13610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13610;pseudo=true NZ_CP006568.1 Protein Homology CDS 2682649 2685323 . + 0 ID=cds2730;Parent=gene2767;Note=Catalyzes the conversion of citrate to isocitrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aconitate hydratase;pseudo=true;transl_except=(pos:2683072..2683074%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2685375 2685599 . - . ID=gene2768;Name=SOPEG_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13615 NZ_CP006568.1 GeneMarkS+ CDS 2685375 2685599 . - 0 ID=cds2731;Parent=gene2768;Dbxref=Genbank:WP_025245759.1;Name=WP_025245759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245759.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2685998 2686453 . + . ID=gene2769;Name=SOPEG_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13620;old_locus_tag=SOPEG_2537 NZ_CP006568.1 Protein Homology CDS 2685998 2686453 . + 0 ID=cds2732;Parent=gene2769;Dbxref=Genbank:WP_025245760.1;Name=WP_025245760.1;gbkey=CDS;product=GCN5 family acetyltransferase;protein_id=WP_025245760.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2686645 2687244 . - . ID=gene2770;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=SOPEG_RS13625;old_locus_tag=SOPEG_2538 NZ_CP006568.1 Protein Homology CDS 2686645 2687244 . - 0 ID=cds2733;Parent=gene2770;Dbxref=Genbank:WP_025245761.1;Name=WP_025245761.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase;protein_id=WP_025245761.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2687506 2688264 . + . ID=gene2771;Name=SOPEG_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13630;old_locus_tag=SOPEG_2539 NZ_CP006568.1 Protein Homology CDS 2687506 2688264 . + 0 ID=cds2734;Parent=gene2771;Dbxref=Genbank:WP_025245762.1;Name=WP_025245762.1;gbkey=CDS;product=phosphatidylglycerophosphatase;protein_id=WP_025245762.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2688502 2688819 . + . ID=gene2772;Name=SOPEG_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13635;old_locus_tag=SOPEG_2540 NZ_CP006568.1 Protein Homology CDS 2688502 2688819 . + 0 ID=cds2735;Parent=gene2772;Dbxref=Genbank:WP_025245763.1;Name=WP_025245763.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245763.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2688826 2689995 . + . ID=gene2773;Name=SOPEG_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13640;old_locus_tag=SOPEG_2541 NZ_CP006568.1 Protein Homology CDS 2688826 2689995 . + 0 ID=cds2736;Parent=gene2773;Dbxref=Genbank:WP_025245764.1;Name=WP_025245764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245764.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2690148 2690888 . + . ID=gene2774;Name=SOPEG_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13645;old_locus_tag=SOPEG_2542 NZ_CP006568.1 Protein Homology CDS 2690148 2690888 . + 0 ID=cds2737;Parent=gene2774;Dbxref=Genbank:WP_038470175.1;Name=WP_038470175.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_038470175.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2690878 2691200 . + . ID=gene2775;Name=SOPEG_RS13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13650;pseudo=true NZ_CP006568.1 Protein Homology CDS 2690878 2691200 . + 0 ID=cds2738;Parent=gene2775;Note=involved in start site selection during the initiation of translation;exception=annotated by transcript or proteomic data;gbkey=CDS;product=translation initiation factor Sui1;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2691709 2692395 . + . ID=gene2776;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SOPEG_RS13660;old_locus_tag=SOPEG_2545 NZ_CP006568.1 Protein Homology CDS 2691709 2692395 . + 0 ID=cds2739;Parent=gene2776;Dbxref=Genbank:WP_025245766.1;Name=WP_025245766.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=ribulose 5-phosphate epimerase;protein_id=WP_025245766.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2692547 2692744 . - . ID=gene2777;Name=SOPEG_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13665 NZ_CP006568.1 GeneMarkS+ CDS 2692547 2692744 . - 0 ID=cds2740;Parent=gene2777;Dbxref=Genbank:WP_025245767.1;Name=WP_025245767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245767.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2692887 2693828 . + . ID=gene2778;Name=SOPEG_RS13670;end_range=2693828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13670;old_locus_tag=SOPEG_2546;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2692887 2693828 . + 0 ID=cds2741;Parent=gene2778;Note=transports degraded pectin products into the bacterial cell;end_range=2693828,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=2-keto-3-deoxygluconate permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2694043 2695977 . - . ID=gene2779;Name=SOPEG_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13675;old_locus_tag=SOPEG_2547 NZ_CP006568.1 Protein Homology CDS 2694043 2695977 . - 0 ID=cds2742;Parent=gene2779;Dbxref=Genbank:WP_025245769.1;Name=WP_025245769.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease II;protein_id=WP_025245769.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2696061 2698336 . - . ID=gene2780;Name=SOPEG_RS13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13680;pseudo=true NZ_CP006568.1 Protein Homology CDS 2696061 2698336 . - 0 ID=cds2743;Parent=gene2780;exception=annotated by transcript or proteomic data;gbkey=CDS;product=CbbBc protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2698589 2700186 . + . ID=gene2781;Name=SOPEG_RS13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13685;pseudo=true NZ_CP006568.1 Protein Homology CDS 2698589 2700186 . + 0 ID=cds2744;Parent=gene2781;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS maltose transporter subunit IICB;pseudo=true;transl_except=(pos:2698973..2698975%2Caa:Other),(pos:2698976..2698978%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2700439 2701369 . + . ID=gene2782;Name=SOPEG_RS13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13690;pseudo=true NZ_CP006568.1 Protein Homology CDS 2700439 2701369 . + 0 ID=cds2745;Parent=gene2782;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2701474 2702262 . - . ID=gene2783;Name=SOPEG_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13695;old_locus_tag=SOPEG_2551 NZ_CP006568.1 Protein Homology CDS 2701474 2702262 . - 0 ID=cds2746;Parent=gene2783;Dbxref=Genbank:WP_025245770.1;Name=WP_025245770.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;product=enoyl-ACP reductase;protein_id=WP_025245770.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2702448 2703260 . - . ID=gene2784;Name=SOPEG_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13700;old_locus_tag=SOPEG_2552 NZ_CP006568.1 Protein Homology CDS 2702448 2703260 . - 0 ID=cds2747;Parent=gene2784;Dbxref=Genbank:WP_025245771.1;Name=WP_025245771.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_025245771.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2703263 2704257 . - . ID=gene2785;Name=SOPEG_RS13705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13705;pseudo=true NZ_CP006568.1 Protein Homology CDS 2703263 2704257 . - 0 ID=cds2748;Parent=gene2785;Note=involved in resistance to antimibial peptides;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2704257 2705147 . - . ID=gene2786;Name=SOPEG_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13710;old_locus_tag=SOPEG_2554 NZ_CP006568.1 Protein Homology CDS 2704257 2705147 . - 0 ID=cds2749;Parent=gene2786;Dbxref=Genbank:WP_025245772.1;Name=WP_025245772.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025245772.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2705134 2706099 . - . ID=gene2787;Name=SOPEG_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13715;old_locus_tag=SOPEG_2555 NZ_CP006568.1 Protein Homology CDS 2705134 2706099 . - 0 ID=cds2750;Parent=gene2787;Dbxref=Genbank:WP_025245773.1;Name=WP_025245773.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025245773.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2706096 2707685 . - . ID=gene2788;Name=SOPEG_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13720 NZ_CP006568.1 Protein Homology CDS 2706096 2707685 . - 0 ID=cds2751;Parent=gene2788;Dbxref=Genbank:WP_025245774.1;Name=WP_025245774.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_025245774.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2708136 2710505 . + . ID=gene2789;Name=SOPEG_RS13725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13725;pseudo=true NZ_CP006568.1 Protein Homology CDS 2708136 2710505 . + 0 ID=cds2752;Parent=gene2789;gbkey=CDS;product=TonB-dependent receptor;pseudo=true;transl_except=(pos:2709429..2709431%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2710741 2711770 . - . ID=gene2790;Name=SOPEG_RS13730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13730;pseudo=true NZ_CP006568.1 Protein Homology CDS 2710741 2711770 . - 0 ID=cds2753;Parent=gene2790;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemin transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2712874 2713218 . - . ID=gene2791;Name=SOPEG_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13735 NZ_CP006568.1 GeneMarkS+ CDS 2712874 2713218 . - 0 ID=cds2754;Parent=gene2791;Dbxref=Genbank:WP_025245775.1;Name=WP_025245775.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245775.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2713379 2714221 . - . ID=gene2792;Name=SOPEG_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13740 NZ_CP006568.1 Protein Homology CDS 2713379 2714221 . - 0 ID=cds2755;Parent=gene2792;Dbxref=Genbank:WP_025245776.1;Name=WP_025245776.1;gbkey=CDS;product=transposase;protein_id=WP_025245776.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2713462 2716119 . + . ID=id398;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2714456 2714761 . - . ID=gene2793;Name=SOPEG_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13745;old_locus_tag=SOPEG_2560 NZ_CP006568.1 Protein Homology CDS 2714456 2714761 . - 0 ID=cds2756;Parent=gene2793;Dbxref=Genbank:WP_051419718.1;Name=WP_051419718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419718.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2714950 2715792 . + . ID=gene2794;Name=SOPEG_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13750 NZ_CP006568.1 Protein Homology CDS 2714950 2715792 . + 0 ID=cds2757;Parent=gene2794;Dbxref=Genbank:WP_025245778.1;Name=WP_025245778.1;gbkey=CDS;product=transposase;protein_id=WP_025245778.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2715978 2716163 . + . ID=gene2795;Name=SOPEG_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13755;old_locus_tag=SOPEG_2562 NZ_CP006568.1 GeneMarkS+ CDS 2715978 2716163 . + 0 ID=cds2758;Parent=gene2795;Dbxref=Genbank:WP_025245779.1;Name=WP_025245779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245779.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2716156 2717160 . + . ID=gene2796;Name=SOPEG_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13760;old_locus_tag=SOPEG_2563 NZ_CP006568.1 Protein Homology CDS 2716156 2717160 . + 0 ID=cds2759;Parent=gene2796;Dbxref=Genbank:WP_025245780.1;Name=WP_025245780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245780.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2717050 2718787 . + . ID=id399;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2717244 2717540 . + . ID=gene2797;Name=SOPEG_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13765 NZ_CP006568.1 Protein Homology CDS 2717244 2717540 . + 0 ID=cds2760;Parent=gene2797;Dbxref=Genbank:WP_051419720.1;Name=WP_051419720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419720.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2717537 2718711 . - . ID=gene2798;Name=SOPEG_RS13770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13770;pseudo=true NZ_CP006568.1 Protein Homology CDS 2717537 2718711 . - 0 ID=cds2761;Parent=gene2798;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2718785 2719759 . + . ID=gene2799;Name=SOPEG_RS13775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13775;partial=true;pseudo=true;start_range=.,2718785 NZ_CP006568.1 Protein Homology CDS 2718785 2719759 . + 0 ID=cds2762;Parent=gene2799;gbkey=CDS;partial=true;product=DNA polymerase;pseudo=true;start_range=.,2718785;transl_except=(pos:2718788..2718790%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2720116 2726279 . + . ID=id400;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2720192 2721400 . + . ID=gene2800;Name=SOPEG_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13780;old_locus_tag=SOPEG_2567 NZ_CP006568.1 Protein Homology CDS 2720192 2721400 . + 0 ID=cds2763;Parent=gene2800;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2721760 2722689 . - . ID=gene2801;Name=SOPEG_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13785;old_locus_tag=SOPEG_2568 NZ_CP006568.1 Protein Homology CDS 2721760 2722689 . - 0 ID=cds2764;Parent=gene2801;Dbxref=Genbank:WP_025245782.1;Name=WP_025245782.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025245782.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2722701 2724749 . - . ID=gene2802;Name=SOPEG_RS13790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13790;pseudo=true NZ_CP006568.1 Protein Homology CDS 2722701 2724749 . - 0 ID=cds2765;Parent=gene2802;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2724978 2725901 . - . ID=gene2803;Name=SOPEG_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13795;old_locus_tag=SOPEG_2570 NZ_CP006568.1 Protein Homology CDS 2724978 2725901 . - 0 ID=cds2766;Parent=gene2803;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2726282 2727089 . + . ID=id401;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2726526 2726834 . + . ID=gene2804;Name=SOPEG_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13800 NZ_CP006568.1 Protein Homology CDS 2726526 2726834 . + 0 ID=cds2767;Parent=gene2804;Dbxref=Genbank:WP_025245783.1;Name=WP_025245783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245783.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2726963 2727157 . - . ID=gene2805;Name=SOPEG_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13805 NZ_CP006568.1 GeneMarkS+ CDS 2726963 2727157 . - 0 ID=cds2768;Parent=gene2805;Dbxref=Genbank:WP_038468786.1;Name=WP_038468786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468786.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2727202 2727843 . - . ID=gene2806;Name=SOPEG_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13810;old_locus_tag=SOPEG_2571 NZ_CP006568.1 Protein Homology CDS 2727202 2727843 . - 0 ID=cds2769;Parent=gene2806;Dbxref=Genbank:WP_025245784.1;Name=WP_025245784.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=keto-deoxy-phosphogluconate aldolase;protein_id=WP_025245784.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2727959 2729434 . - . ID=gene2807;Name=SOPEG_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13815;old_locus_tag=SOPEG_2572 NZ_CP006568.1 Protein Homology CDS 2727959 2729434 . - 0 ID=cds2770;Parent=gene2807;Dbxref=Genbank:WP_025245785.1;Name=WP_025245785.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate dehydrogenase;protein_id=WP_025245785.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2729759 2730616 . + . ID=gene2808;Name=SOPEG_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13820;old_locus_tag=SOPEG_2573 NZ_CP006568.1 Protein Homology CDS 2729759 2730616 . + 0 ID=cds2771;Parent=gene2808;Dbxref=Genbank:WP_025245786.1;Name=WP_025245786.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245786.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2730785 2732227 . + . ID=gene2809;Name=SOPEG_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13825;old_locus_tag=SOPEG_2574 NZ_CP006568.1 Protein Homology CDS 2730785 2732227 . + 0 ID=cds2772;Parent=gene2809;Dbxref=Genbank:WP_025245787.1;Name=WP_025245787.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_025245787.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2732283 2732972 . - . ID=gene2810;Name=SOPEG_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13830 NZ_CP006568.1 Protein Homology CDS 2732283 2732972 . - 0 ID=cds2773;Parent=gene2810;Dbxref=Genbank:WP_025245788.1;Name=WP_025245788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245788.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2732990 2734053 . + . ID=id402;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2733069 2733992 . + . ID=gene2811;Name=SOPEG_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13835;old_locus_tag=SOPEG_2576 NZ_CP006568.1 Protein Homology CDS 2733069 2733992 . + 0 ID=cds2774;Parent=gene2811;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2734120 2735445 . + . ID=id403;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2734157 2735365 . - . ID=gene2812;Name=SOPEG_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13840;old_locus_tag=SOPEG_2577 NZ_CP006568.1 Protein Homology CDS 2734157 2735365 . - 0 ID=cds2775;Parent=gene2812;Dbxref=Genbank:WP_025245789.1;Name=WP_025245789.1;gbkey=CDS;product=transposase;protein_id=WP_025245789.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2735472 2735786 . + . ID=gene2813;Name=SOPEG_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13845 NZ_CP006568.1 Protein Homology CDS 2735472 2735786 . + 0 ID=cds2776;Parent=gene2813;Dbxref=Genbank:WP_025245790.1;Name=WP_025245790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245790.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2736048 2736302 . - . ID=gene2814;Name=SOPEG_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13850;old_locus_tag=SOPEG_2579 NZ_CP006568.1 Protein Homology CDS 2736048 2736302 . - 0 ID=cds2777;Parent=gene2814;Dbxref=Genbank:WP_025245791.1;Name=WP_025245791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245791.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2736411 2736666 . - . ID=gene2815;Name=SOPEG_RS13855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13855;pseudo=true NZ_CP006568.1 Protein Homology CDS 2736411 2736666 . - 0 ID=cds2778;Parent=gene2815;exception=annotated by transcript or proteomic data;gbkey=CDS;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2736836 2737036 . - . ID=gene2816;Name=SOPEG_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13860 NZ_CP006568.1 Protein Homology CDS 2736836 2737036 . - 0 ID=cds2779;Parent=gene2816;Dbxref=Genbank:WP_025245792.1;Name=WP_025245792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245792.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2737175 2737858 . + . ID=gene2817;Name=SOPEG_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13865 NZ_CP006568.1 Protein Homology CDS 2737175 2737858 . + 0 ID=cds2780;Parent=gene2817;Dbxref=Genbank:WP_038468790.1;Name=WP_038468790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468790.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2738166 2742113 . - . ID=gene2818;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=SOPEG_RS13870;old_locus_tag=SOPEG_2583 NZ_CP006568.1 Protein Homology CDS 2738166 2742113 . - 0 ID=cds2781;Parent=gene2818;Dbxref=Genbank:WP_025245794.1;Name=WP_025245794.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=transcriptional regulator;protein_id=WP_025245794.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2742774 2743584 . + . ID=gene2819;Name=SOPEG_RS13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13875;pseudo=true NZ_CP006568.1 Protein Homology CDS 2742774 2743584 . + 0 ID=cds2782;Parent=gene2819;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2743643 2743732 . - . ID=gene2820;Name=SOPEG_RS13880;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS13880;old_locus_tag=SOPEG_t2585 NZ_CP006568.1 tRNAscan-SE tRNA 2743643 2743732 . - . ID=rna37;Parent=gene2820;anticodon=(pos:complement(2743696..2743698));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 tRNAscan-SE exon 2743643 2743732 . - . ID=id404;Parent=rna37;anticodon=(pos:complement(2743696..2743698));gbkey=tRNA;product=tRNA-Ser NZ_CP006568.1 RefSeq repeat_region 2744173 2745492 . + . ID=id405;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2744472 2745454 . + . ID=gene2821;Name=SOPEG_RS13885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13885;pseudo=true NZ_CP006568.1 Protein Homology CDS 2744472 2745454 . + 0 ID=cds2783;Parent=gene2821;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2745752 2747879 . + . ID=id406;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2745897 2746740 . - . ID=gene2822;Name=SOPEG_RS13900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13900;pseudo=true NZ_CP006568.1 Protein Homology CDS 2745897 2746740 . - 0 ID=cds2784;Parent=gene2822;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2746871 2747794 . - . ID=gene2823;Name=SOPEG_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13905;old_locus_tag=SOPEG_2589 NZ_CP006568.1 Protein Homology CDS 2746871 2747794 . - 0 ID=cds2785;Parent=gene2823;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2747855 2748082 . - . ID=gene2824;Name=SOPEG_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13910 NZ_CP006568.1 GeneMarkS+ CDS 2747855 2748082 . - 0 ID=cds2786;Parent=gene2824;Dbxref=Genbank:WP_025245799.1;Name=WP_025245799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245799.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2748355 2748762 . - . ID=gene2825;Name=SOPEG_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13915 NZ_CP006568.1 GeneMarkS+ CDS 2748355 2748762 . - 0 ID=cds2787;Parent=gene2825;Dbxref=Genbank:WP_025245800.1;Name=WP_025245800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245800.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2748790 2749203 . - . ID=gene2826;Name=SOPEG_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13920 NZ_CP006568.1 Protein Homology CDS 2748790 2749203 . - 0 ID=cds2788;Parent=gene2826;Dbxref=Genbank:WP_025245801.1;Name=WP_025245801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245801.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2750532 2751593 . + . ID=id407;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2750611 2751534 . + . ID=gene2827;Name=SOPEG_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13930;old_locus_tag=SOPEG_2593 NZ_CP006568.1 Protein Homology CDS 2750611 2751534 . + 0 ID=cds2789;Parent=gene2827;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2751527 2751706 . - . ID=gene2828;Name=SOPEG_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23085 NZ_CP006568.1 GeneMarkS+ CDS 2751527 2751706 . - 0 ID=cds2790;Parent=gene2828;Dbxref=Genbank:WP_051419722.1;Name=WP_051419722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419722.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2751719 2751940 . + . ID=gene2829;Name=SOPEG_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13935 NZ_CP006568.1 Protein Homology CDS 2751719 2751940 . + 0 ID=cds2791;Parent=gene2829;Dbxref=Genbank:WP_051419725.1;Name=WP_051419725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419725.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2752361 2752916 . - . ID=gene2830;Name=SOPEG_RS13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13940;pseudo=true NZ_CP006568.1 Protein Homology CDS 2752361 2752916 . - 0 ID=cds2792;Parent=gene2830;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2753026 2753673 . - . ID=gene2831;Name=SOPEG_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13945;old_locus_tag=SOPEG_2595 NZ_CP006568.1 Protein Homology CDS 2753026 2753673 . - 0 ID=cds2793;Parent=gene2831;Dbxref=Genbank:WP_025245802.1;Name=WP_025245802.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_025245802.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2753815 2755032 . - . ID=gene2832;Name=SOPEG_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13950;old_locus_tag=SOPEG_2596 NZ_CP006568.1 Protein Homology CDS 2753815 2755032 . - 0 ID=cds2794;Parent=gene2832;Dbxref=Genbank:WP_025245803.1;Name=WP_025245803.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_025245803.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2755312 2755896 . + . ID=gene2833;Name=SOPEG_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13955;old_locus_tag=SOPEG_2597 NZ_CP006568.1 Protein Homology CDS 2755312 2755896 . + 0 ID=cds2795;Parent=gene2833;Dbxref=Genbank:WP_025245804.1;Name=WP_025245804.1;gbkey=CDS;product=ribosomal-protein-alanine acetyltransferase;protein_id=WP_025245804.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2755914 2756849 . + . ID=gene2834;Name=SOPEG_RS13960;end_range=2756849,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13960;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2755914 2756849 . + 0 ID=cds2796;Parent=gene2834;end_range=2756849,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2756834 2757989 . + . ID=id408;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2756984 2757691 . - . ID=gene2835;Name=SOPEG_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13965 NZ_CP006568.1 Protein Homology CDS 2756984 2757691 . - 0 ID=cds2797;Parent=gene2835;Dbxref=Genbank:WP_051419727.1;Name=WP_051419727.1;gbkey=CDS;product=transposase;protein_id=WP_051419727.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2758278 2759819 . + . ID=gene2836;Name=SOPEG_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13970;old_locus_tag=SOPEG_2600 NZ_CP006568.1 Protein Homology CDS 2758278 2759819 . + 0 ID=cds2798;Parent=gene2836;Dbxref=Genbank:WP_025245806.1;Name=WP_025245806.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245806.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2759918 2761648 . - . ID=gene2837;Name=SOPEG_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13975;old_locus_tag=SOPEG_2601 NZ_CP006568.1 Protein Homology CDS 2759918 2761648 . - 0 ID=cds2799;Parent=gene2837;Dbxref=Genbank:WP_025245807.1;Name=WP_025245807.1;gbkey=CDS;product=arginyl-tRNA synthetase;protein_id=WP_025245807.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2762352 2762912 . + . ID=gene2838;Name=SOPEG_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13980;old_locus_tag=SOPEG_2602 NZ_CP006568.1 Protein Homology CDS 2762352 2762912 . + 0 ID=cds2800;Parent=gene2838;Dbxref=Genbank:WP_025245808.1;Name=WP_025245808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245808.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2762918 2764007 . - . ID=gene2839;Name=SOPEG_RS13985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS13985;pseudo=true NZ_CP006568.1 Protein Homology CDS 2762918 2764007 . - 0 ID=cds2801;Parent=gene2839;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aspartate aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2764107 2764865 . + . ID=gene2840;Name=SOPEG_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13990;old_locus_tag=SOPEG_2604 NZ_CP006568.1 Protein Homology CDS 2764107 2764865 . + 0 ID=cds2802;Parent=gene2840;Dbxref=Genbank:WP_025245809.1;Name=WP_025245809.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_025245809.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2765141 2766112 . - . ID=gene2841;Name=SOPEG_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS13995;old_locus_tag=SOPEG_2605 NZ_CP006568.1 Protein Homology CDS 2765141 2766112 . - 0 ID=cds2803;Parent=gene2841;Dbxref=Genbank:WP_025245810.1;Name=WP_025245810.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_025245810.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2766109 2766844 . - . ID=gene2842;Name=SOPEG_RS14000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14000;pseudo=true NZ_CP006568.1 Protein Homology CDS 2766109 2766844 . - 0 ID=cds2804;Parent=gene2842;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2766933 2767328 . - . ID=gene2843;Name=SOPEG_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14005;old_locus_tag=SOPEG_2607 NZ_CP006568.1 Protein Homology CDS 2766933 2767328 . - 0 ID=cds2805;Parent=gene2843;Dbxref=Genbank:WP_025245811.1;Name=WP_025245811.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245811.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2767436 2768254 . - . ID=gene2844;Name=SOPEG_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14010;old_locus_tag=SOPEG_2608 NZ_CP006568.1 Protein Homology CDS 2767436 2768254 . - 0 ID=cds2806;Parent=gene2844;Dbxref=Genbank:WP_025245812.1;Name=WP_025245812.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245812.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2768330 2768899 . - . ID=gene2845;Name=SOPEG_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14015;old_locus_tag=SOPEG_2609 NZ_CP006568.1 Protein Homology CDS 2768330 2768899 . - 0 ID=cds2807;Parent=gene2845;Dbxref=Genbank:WP_025245813.1;Name=WP_025245813.1;gbkey=CDS;product=hydrolase;protein_id=WP_025245813.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2769268 2771058 . + . ID=gene2846;Name=SOPEG_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14020;old_locus_tag=SOPEG_2610 NZ_CP006568.1 Protein Homology CDS 2769268 2771058 . + 0 ID=cds2808;Parent=gene2846;Dbxref=Genbank:WP_025245814.1;Name=WP_025245814.1;gbkey=CDS;product=aspartyl-tRNA synthetase;protein_id=WP_025245814.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2771058 2771498 . + . ID=gene2847;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=SOPEG_RS14025;old_locus_tag=SOPEG_2611 NZ_CP006568.1 Protein Homology CDS 2771058 2771498 . + 0 ID=cds2809;Parent=gene2847;Dbxref=Genbank:WP_025245815.1;Name=WP_025245815.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dihydroneopterin triphosphate pyrophosphatase;protein_id=WP_025245815.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2771522 2772265 . + . ID=gene2848;Name=SOPEG_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14030;old_locus_tag=SOPEG_2612 NZ_CP006568.1 Protein Homology CDS 2771522 2772265 . + 0 ID=cds2810;Parent=gene2848;Dbxref=Genbank:WP_025245816.1;Name=WP_025245816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245816.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2772309 2772830 . + . ID=gene2849;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=SOPEG_RS14035;old_locus_tag=SOPEG_2613 NZ_CP006568.1 Protein Homology CDS 2772309 2772830 . + 0 ID=cds2811;Parent=gene2849;Dbxref=Genbank:WP_025245817.1;Name=WP_025245817.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=Holliday junction DNA helicase;protein_id=WP_025245817.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2772938 2773555 . + . ID=gene2850;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=SOPEG_RS14040;pseudo=true NZ_CP006568.1 Protein Homology CDS 2772938 2773555 . + 0 ID=cds2812;Parent=gene2850;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=ATP-dependent DNA helicase RuvA;pseudo=true;transl_except=(pos:2773466..2773468%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2773564 2774416 . + . ID=gene2851;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=pseudogene;locus_tag=SOPEG_RS14045;pseudo=true NZ_CP006568.1 Protein Homology CDS 2773564 2774416 . + 0 ID=cds2813;Parent=gene2851;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ruvB;product=ATP-dependent DNA helicase RuvB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2774510 2775295 . - . ID=gene2852;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=SOPEG_RS14050;old_locus_tag=SOPEG_2616 NZ_CP006568.1 Protein Homology CDS 2774510 2775295 . - 0 ID=cds2814;Parent=gene2852;Dbxref=Genbank:WP_025245818.1;Name=WP_025245818.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc ABC transporter permease;protein_id=WP_025245818.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2775292 2776050 . - . ID=gene2853;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=SOPEG_RS14055;old_locus_tag=SOPEG_2617 NZ_CP006568.1 Protein Homology CDS 2775292 2776050 . - 0 ID=cds2815;Parent=gene2853;Dbxref=Genbank:WP_025245819.1;Name=WP_025245819.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=zinc ABC transporter ATPase;protein_id=WP_025245819.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2776205 2777095 . + . ID=gene2854;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=SOPEG_RS14060;old_locus_tag=SOPEG_2618 NZ_CP006568.1 Protein Homology CDS 2776205 2777095 . + 0 ID=cds2816;Parent=gene2854;Dbxref=Genbank:WP_051420007.1;Name=WP_051420007.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc ABC transporter substrate-binding protein;protein_id=WP_051420007.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2777108 2778433 . + . ID=gene2855;Name=SOPEG_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14065;old_locus_tag=SOPEG_2619 NZ_CP006568.1 Protein Homology CDS 2777108 2778433 . + 0 ID=cds2817;Parent=gene2855;Dbxref=Genbank:WP_025245821.1;Name=WP_025245821.1;gbkey=CDS;product=peptidase;protein_id=WP_025245821.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2778534 2779496 . + . ID=gene2856;Name=SOPEG_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14070;old_locus_tag=SOPEG_2620 NZ_CP006568.1 Protein Homology CDS 2778534 2779496 . + 0 ID=cds2818;Parent=gene2856;Dbxref=Genbank:WP_025245822.1;Name=WP_025245822.1;gbkey=CDS;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=WP_025245822.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2779716 2781070 . - . ID=gene2857;Name=SOPEG_RS14075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14075;pseudo=true NZ_CP006568.1 Protein Homology CDS 2779716 2781070 . - 0 ID=cds2819;Parent=gene2857;exception=annotated by transcript or proteomic data;gbkey=CDS;product=manganese transporter;pseudo=true;transl_except=(pos:complement(2780250..2780252)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2781790 2782578 . - . ID=gene2858;Name=SOPEG_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14080;old_locus_tag=SOPEG_2622 NZ_CP006568.1 Protein Homology CDS 2781790 2782578 . - 0 ID=cds2820;Parent=gene2858;Dbxref=Genbank:WP_025245823.1;Name=WP_025245823.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245823.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2783108 2783518 . + . ID=gene2859;Name=SOPEG_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14085 NZ_CP006568.1 GeneMarkS+ CDS 2783108 2783518 . + 0 ID=cds2821;Parent=gene2859;Dbxref=Genbank:WP_025245824.1;Name=WP_025245824.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245824.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2783503 2784827 . + . ID=id409;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2783579 2784787 . + . ID=gene2860;Name=SOPEG_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14090;old_locus_tag=SOPEG_2624 NZ_CP006568.1 Protein Homology CDS 2783579 2784787 . + 0 ID=cds2822;Parent=gene2860;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2784966 2785766 . - . ID=gene2861;Name=SOPEG_RS14095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14095;pseudo=true NZ_CP006568.1 Protein Homology CDS 2784966 2785766 . - 0 ID=cds2823;Parent=gene2861;Note=biosynthetic%3B catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate%3B expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature;gbkey=CDS;product=trehalose phosphatase;pseudo=true;transl_except=(pos:complement(2785665..2785667)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2786922 2787221 . + . ID=gene2862;Name=rcsA;end_range=2787221,.;gbkey=Gene;gene=rcsA;gene_biotype=pseudogene;locus_tag=SOPEG_RS14100;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2786922 2787221 . + 0 ID=cds2824;Parent=gene2862;Note=with RcsB is a positive regulator of capsular polysaccharide synthesis genes;end_range=2787221,.;exception=unextendable partial coding region;gbkey=CDS;gene=rcsA;partial=true;product=capsule biosynthesis protein CapA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2787238 2788300 . + . ID=id410;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2787299 2788222 . - . ID=gene2863;Name=SOPEG_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14105;old_locus_tag=SOPEG_2628 NZ_CP006568.1 Protein Homology CDS 2787299 2788222 . - 0 ID=cds2825;Parent=gene2863;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2788272 2788619 . + . ID=gene2864;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=pseudogene;locus_tag=SOPEG_RS14110;partial=true;pseudo=true;start_range=.,2788272 NZ_CP006568.1 Protein Homology CDS 2788272 2788619 . + 0 ID=cds2826;Parent=gene2864;Note=with RcsB is a positive regulator of capsular polysaccharide synthesis genes;exception=unextendable partial coding region;gbkey=CDS;gene=rcsA;partial=true;product=capsule biosynthesis protein CapA;pseudo=true;start_range=.,2788272;transl_table=11 NZ_CP006568.1 RefSeq gene 2788606 2788818 . - . ID=gene2865;Name=SOPEG_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14115 NZ_CP006568.1 Protein Homology CDS 2788606 2788818 . - 0 ID=cds2827;Parent=gene2865;Dbxref=Genbank:WP_025245826.1;Name=WP_025245826.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2788799 2789005 . - . ID=gene2866;Name=SOPEG_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14120;old_locus_tag=SOPEG_2629 NZ_CP006568.1 Protein Homology CDS 2788799 2789005 . - 0 ID=cds2828;Parent=gene2866;Dbxref=Genbank:WP_025245827.1;Name=WP_025245827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245827.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2789382 2789615 . + . ID=gene2867;Name=SOPEG_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14125;old_locus_tag=SOPEG_2630 NZ_CP006568.1 Protein Homology CDS 2789382 2789615 . + 0 ID=cds2829;Parent=gene2867;Dbxref=Genbank:WP_025245828.1;Name=WP_025245828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245828.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2790106 2790918 . + . ID=gene2868;Name=SOPEG_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14130;old_locus_tag=SOPEG_2631 NZ_CP006568.1 Protein Homology CDS 2790106 2790918 . + 0 ID=cds2830;Parent=gene2868;Dbxref=Genbank:WP_025245829.1;Name=WP_025245829.1;gbkey=CDS;product=mannosyl-3-phosphoglycerate phosphatase;protein_id=WP_025245829.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2790974 2792195 . + . ID=gene2869;Name=SOPEG_RS14135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14135;pseudo=true NZ_CP006568.1 Protein Homology CDS 2790974 2792195 . + 0 ID=cds2831;Parent=gene2869;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyl transferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2792339 2792734 . + . ID=gene2870;Name=SOPEG_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14140;old_locus_tag=SOPEG_2633 NZ_CP006568.1 Protein Homology CDS 2792339 2792734 . + 0 ID=cds2832;Parent=gene2870;Dbxref=Genbank:WP_025245830.1;Name=WP_025245830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245830.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2793515 2794840 . + . ID=id411;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2793551 2793769 . - . ID=gene2871;Name=SOPEG_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14145 NZ_CP006568.1 Protein Homology CDS 2793551 2793769 . - 0 ID=cds2833;Parent=gene2871;Dbxref=Genbank:WP_025245831.1;Name=WP_025245831.1;gbkey=CDS;product=transposase;protein_id=WP_025245831.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2793838 2794218 . - . ID=gene2872;Name=SOPEG_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14150 NZ_CP006568.1 Protein Homology CDS 2793838 2794218 . - 0 ID=cds2834;Parent=gene2872;Dbxref=Genbank:WP_038468795.1;Name=WP_038468795.1;gbkey=CDS;product=transposase;protein_id=WP_038468795.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2794324 2794764 . - . ID=gene2873;Name=SOPEG_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14155 NZ_CP006568.1 Protein Homology CDS 2794324 2794764 . - 0 ID=cds2835;Parent=gene2873;Dbxref=Genbank:WP_038468798.1;Name=WP_038468798.1;gbkey=CDS;product=transposase;protein_id=WP_038468798.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2795546 2795926 . - . ID=gene2874;Name=SOPEG_RS14160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14160;pseudo=true NZ_CP006568.1 Protein Homology CDS 2795546 2795926 . - 0 ID=cds2836;Parent=gene2874;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2795789..2795791)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2796029 2797078 . - . ID=gene2875;Name=SOPEG_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14165;old_locus_tag=SOPEG_2637 NZ_CP006568.1 Protein Homology CDS 2796029 2797078 . - 0 ID=cds2837;Parent=gene2875;Dbxref=Genbank:WP_025245832.1;Name=WP_025245832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245832.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2797394 2797693 . - . ID=gene2876;Name=SOPEG_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14170 NZ_CP006568.1 Protein Homology CDS 2797394 2797693 . - 0 ID=cds2838;Parent=gene2876;Dbxref=Genbank:WP_025245833.1;Name=WP_025245833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245833.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2798818 2799138 . - . ID=gene2877;Name=SOPEG_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14180 NZ_CP006568.1 Protein Homology CDS 2798818 2799138 . - 0 ID=cds2839;Parent=gene2877;Dbxref=Genbank:WP_025245834.1;Name=WP_025245834.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2799176 2800238 . + . ID=id412;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2799236 2800159 . - . ID=gene2878;Name=SOPEG_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14185;old_locus_tag=SOPEG_2642 NZ_CP006568.1 Protein Homology CDS 2799236 2800159 . - 0 ID=cds2840;Parent=gene2878;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2800224 2800871 . - . ID=gene2879;Name=SOPEG_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14190 NZ_CP006568.1 Protein Homology CDS 2800224 2800871 . - 0 ID=cds2841;Parent=gene2879;Dbxref=Genbank:WP_051419728.1;Name=WP_051419728.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419728.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2800852 2801463 . - . ID=gene2880;Name=SOPEG_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14195 NZ_CP006568.1 Protein Homology CDS 2800852 2801463 . - 0 ID=cds2842;Parent=gene2880;Dbxref=Genbank:WP_051419730.1;Name=WP_051419730.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419730.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2801494 2802712 . + . ID=id413;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2801730 2802551 . + . ID=gene2881;Name=SOPEG_RS23090;end_range=2802551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23090;old_locus_tag=SOPEG_ps2645;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2801730 2802551 . + 0 ID=cds2843;Parent=gene2881;end_range=2802551,.;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_except=(pos:2802138..2802140%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2802513 2802653 . + . ID=gene2882;Name=SOPEG_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14205 NZ_CP006568.1 Protein Homology CDS 2802513 2802653 . + 0 ID=cds2844;Parent=gene2882;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2802699 2802882 . - . ID=gene2883;Name=SOPEG_RS14210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14210;pseudo=true NZ_CP006568.1 Protein Homology CDS 2802699 2802882 . - 0 ID=cds2845;Parent=gene2883;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2802914 2805457 . + . ID=id414;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2803049 2804569 . + . ID=gene2884;Name=SOPEG_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14215 NZ_CP006568.1 Protein Homology CDS 2803049 2804569 . + 0 ID=cds2846;Parent=gene2884;Dbxref=Genbank:WP_025245837.1;Name=WP_025245837.1;gbkey=CDS;product=transposase;protein_id=WP_025245837.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2804581 2805334 . + . ID=gene2885;Name=SOPEG_RS14220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14220;pseudo=true NZ_CP006568.1 Protein Homology CDS 2804581 2805334 . + 0 ID=cds2847;Parent=gene2885;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2805856 2806764 . - . ID=gene2886;Name=SOPEG_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14225 NZ_CP006568.1 Protein Homology CDS 2805856 2806764 . - 0 ID=cds2848;Parent=gene2886;Dbxref=Genbank:WP_025245838.1;Name=WP_025245838.1;gbkey=CDS;product=transporter;protein_id=WP_025245838.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2807534 2807842 . + . ID=gene2887;Name=SOPEG_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14230 NZ_CP006568.1 Protein Homology CDS 2807534 2807842 . + 0 ID=cds2849;Parent=gene2887;Dbxref=Genbank:WP_051419732.1;Name=WP_051419732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419732.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2807942 2808133 . + . ID=gene2888;Name=SOPEG_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14235 NZ_CP006568.1 GeneMarkS+ CDS 2807942 2808133 . + 0 ID=cds2850;Parent=gene2888;Dbxref=Genbank:WP_025245839.1;Name=WP_025245839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245839.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2808322 2809385 . + . ID=id415;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2808382 2809305 . - . ID=gene2889;Name=SOPEG_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14240;old_locus_tag=SOPEG_2651 NZ_CP006568.1 Protein Homology CDS 2808382 2809305 . - 0 ID=cds2851;Parent=gene2889;Dbxref=Genbank:WP_025245840.1;Name=WP_025245840.1;gbkey=CDS;product=transposase;protein_id=WP_025245840.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2809415 2809603 . + . ID=gene2890;Name=SOPEG_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14245 NZ_CP006568.1 GeneMarkS+ CDS 2809415 2809603 . + 0 ID=cds2852;Parent=gene2890;Dbxref=Genbank:WP_038468807.1;Name=WP_038468807.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468807.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2810766 2811617 . + . ID=gene2891;Name=SOPEG_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14250;old_locus_tag=SOPEG_2652 NZ_CP006568.1 Protein Homology CDS 2810766 2811617 . + 0 ID=cds2853;Parent=gene2891;Dbxref=Genbank:WP_051419734.1;Name=WP_051419734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419734.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2811853 2815786 . + . ID=id416;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2811907 2812125 . - . ID=gene2892;Name=SOPEG_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14255 NZ_CP006568.1 Protein Homology CDS 2811907 2812125 . - 0 ID=cds2854;Parent=gene2892;Dbxref=Genbank:WP_025246992.1;Name=WP_025246992.1;gbkey=CDS;product=transposase;protein_id=WP_025246992.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2812183 2813115 . - . ID=gene2893;Name=SOPEG_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14260 NZ_CP006568.1 Protein Homology CDS 2812183 2813115 . - 0 ID=cds2855;Parent=gene2893;Dbxref=Genbank:WP_051419705.1;Name=WP_051419705.1;gbkey=CDS;product=transposase;protein_id=WP_051419705.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2813304 2814053 . - . ID=gene2894;Name=SOPEG_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14265;old_locus_tag=SOPEG_2654 NZ_CP006568.1 Protein Homology CDS 2813304 2814053 . - 0 ID=cds2856;Parent=gene2894;Dbxref=Genbank:WP_025245842.1;Name=WP_025245842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245842.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2814065 2815582 . - . ID=gene2895;Name=SOPEG_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14270;old_locus_tag=SOPEG_2655 NZ_CP006568.1 Protein Homology CDS 2814065 2815582 . - 0 ID=cds2857;Parent=gene2895;Dbxref=Genbank:WP_025245843.1;Name=WP_025245843.1;gbkey=CDS;product=transposase;protein_id=WP_025245843.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2815825 2815901 . - . ID=gene2896;Name=SOPEG_RS14275;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS14275 NZ_CP006568.1 tRNAscan-SE tRNA 2815825 2815901 . - . ID=rna38;Parent=gene2896;anticodon=(pos:complement(2815866..2815868));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 2815865 2815901 . - . ID=id417;Parent=rna38;anticodon=(pos:complement(2815866..2815868));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 tRNAscan-SE exon 2815825 2815859 . - . ID=id418;Parent=rna38;anticodon=(pos:complement(2815866..2815868));gbkey=tRNA;product=tRNA-Leu NZ_CP006568.1 RefSeq gene 2816070 2816956 . + . ID=gene2897;Name=SOPEG_RS14280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14280;pseudo=true NZ_CP006568.1 Protein Homology CDS 2816070 2816956 . + 0 ID=cds2858;Parent=gene2897;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2817085 2818647 . + . ID=id419;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2817160 2818083 . + . ID=gene2898;Name=SOPEG_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14285 NZ_CP006568.1 Protein Homology CDS 2817160 2818083 . + 0 ID=cds2859;Parent=gene2898;Dbxref=Genbank:WP_025245844.1;Name=WP_025245844.1;gbkey=CDS;product=transposase;protein_id=WP_025245844.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2818152 2818370 . + . ID=gene2899;Name=SOPEG_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14290 NZ_CP006568.1 Protein Homology CDS 2818152 2818370 . + 0 ID=cds2860;Parent=gene2899;Dbxref=Genbank:WP_038468810.1;Name=WP_038468810.1;gbkey=CDS;product=transposase;protein_id=WP_038468810.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2818448 2818711 . - . ID=gene2900;Name=SOPEG_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14295 NZ_CP006568.1 GeneMarkS+ CDS 2818448 2818711 . - 0 ID=cds2861;Parent=gene2900;Dbxref=Genbank:WP_025245846.1;Name=WP_025245846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245846.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2819568 2824031 . - . ID=gene2901;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=SOPEG_RS14300;old_locus_tag=SOPEG_2658 NZ_CP006568.1 Protein Homology CDS 2819568 2824031 . - 0 ID=cds2862;Parent=gene2901;Dbxref=Genbank:WP_025245848.1;Name=WP_025245848.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=cell division protein MukB;protein_id=WP_025245848.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2824028 2824765 . - . ID=gene2902;Name=SOPEG_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14305;old_locus_tag=SOPEG_2659 NZ_CP006568.1 Protein Homology CDS 2824028 2824765 . - 0 ID=cds2863;Parent=gene2902;Dbxref=Genbank:WP_025245849.1;Name=WP_025245849.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_025245849.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2824746 2826068 . - . ID=gene2903;Name=SOPEG_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14310;old_locus_tag=SOPEG_2660 NZ_CP006568.1 Protein Homology CDS 2824746 2826068 . - 0 ID=cds2864;Parent=gene2903;Dbxref=Genbank:WP_025245850.1;Name=WP_025245850.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit F;protein_id=WP_025245850.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2826213 2826611 . - . ID=gene2904;Name=SOPEG_RS14315;end_range=2826611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14315;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2826213 2826611 . - 0 ID=cds2865;Parent=gene2904;end_range=2826611,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2826803 2827516 . + . ID=gene2905;Name=SOPEG_RS14320;end_range=2827516,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14320;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2826803 2827516 . + 0 ID=cds2866;Parent=gene2905;end_range=2827516,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2827571 2828455 . - . ID=gene2906;Name=SOPEG_RS14325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14325;pseudo=true NZ_CP006568.1 Protein Homology CDS 2827571 2828455 . - 0 ID=cds2867;Parent=gene2906;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2828162..2828164)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2828621 2829376 . - . ID=gene2907;Name=SOPEG_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14330;old_locus_tag=SOPEG_2663 NZ_CP006568.1 Protein Homology CDS 2828621 2829376 . - 0 ID=cds2868;Parent=gene2907;Dbxref=Genbank:WP_025245853.1;Name=WP_025245853.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_025245853.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2829373 2829555 . - . ID=gene2908;Name=SOPEG_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14335;old_locus_tag=SOPEG_2664 NZ_CP006568.1 Protein Homology CDS 2829373 2829555 . - 0 ID=cds2869;Parent=gene2908;Dbxref=Genbank:WP_025245854.1;Name=WP_025245854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245854.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2829915 2830928 . - . ID=gene2909;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=SOPEG_RS14340;old_locus_tag=SOPEG_2665 NZ_CP006568.1 Protein Homology CDS 2829915 2830928 . - 0 ID=cds2870;Parent=gene2909;Dbxref=Genbank:WP_025245855.1;Name=WP_025245855.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_025245855.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2830925 2832673 . - . ID=gene2910;Name=SOPEG_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14345;old_locus_tag=SOPEG_2666 NZ_CP006568.1 Protein Homology CDS 2830925 2832673 . - 0 ID=cds2871;Parent=gene2910;Dbxref=Genbank:WP_025245856.1;Name=WP_025245856.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid transporter ATP-binding/permease;protein_id=WP_025245856.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2832710 2832943 . - . ID=gene2911;Name=SOPEG_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23095 NZ_CP006568.1 GeneMarkS+ CDS 2832710 2832943 . - 0 ID=cds2872;Parent=gene2911;Dbxref=Genbank:WP_051419736.1;Name=WP_051419736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419736.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2832986 2833279 . + . ID=gene2912;Name=SOPEG_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23100 NZ_CP006568.1 GeneMarkS+ CDS 2832986 2833279 . + 0 ID=cds2873;Parent=gene2912;Dbxref=Genbank:WP_025245858.1;Name=WP_025245858.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245858.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2833296 2833958 . - . ID=gene2913;Name=SOPEG_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23105 NZ_CP006568.1 Protein Homology CDS 2833296 2833958 . - 0 ID=cds2874;Parent=gene2913;Dbxref=Genbank:WP_025245859.1;Name=WP_025245859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245859.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2833981 2834415 . - . ID=gene2914;Name=SOPEG_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23110 NZ_CP006568.1 GeneMarkS+ CDS 2833981 2834415 . - 0 ID=cds2875;Parent=gene2914;Dbxref=Genbank:WP_025245860.1;Name=WP_025245860.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245860.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2834491 2834832 . - . ID=gene2915;Name=SOPEG_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23115 NZ_CP006568.1 GeneMarkS+ CDS 2834491 2834832 . - 0 ID=cds2876;Parent=gene2915;Dbxref=Genbank:WP_025245861.1;Name=WP_025245861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245861.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2835023 2836273 . - . ID=gene2916;Name=SOPEG_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14355;old_locus_tag=SOPEG_2668 NZ_CP006568.1 GeneMarkS+ CDS 2835023 2836273 . - 0 ID=cds2877;Parent=gene2916;Dbxref=Genbank:WP_038468814.1;Name=WP_038468814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468814.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2836584 2838011 . - . ID=gene2917;Name=SOPEG_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14360;old_locus_tag=SOPEG_2669 NZ_CP006568.1 Protein Homology CDS 2836584 2838011 . - 0 ID=cds2878;Parent=gene2917;Dbxref=Genbank:WP_025245863.1;Name=WP_025245863.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_025245863.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2838233 2839726 . - . ID=gene2918;Name=aceF;end_range=2839726,.;gbkey=Gene;gene=aceF;gene_biotype=pseudogene;locus_tag=SOPEG_RS14365;old_locus_tag=SOPEG_2670;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2838233 2839726 . - 0 ID=cds2879;Parent=gene2918;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;end_range=2839726,.;exception=unextendable partial coding region;gbkey=CDS;gene=aceF;partial=true;product=pyruvate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2839745 2842411 . - . ID=gene2919;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=SOPEG_RS14370;old_locus_tag=SOPEG_2671 NZ_CP006568.1 Protein Homology CDS 2839745 2842411 . - 0 ID=cds2880;Parent=gene2919;Dbxref=Genbank:WP_025245865.1;Name=WP_025245865.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_025245865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2842539 2843303 . - . ID=gene2920;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=SOPEG_RS14375;old_locus_tag=SOPEG_2672 NZ_CP006568.1 Protein Homology CDS 2842539 2843303 . - 0 ID=cds2881;Parent=gene2920;Dbxref=Genbank:WP_025245866.1;Name=WP_025245866.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=PdhR family transcriptional regulator;protein_id=WP_025245866.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2843871 2845238 . + . ID=gene2921;Name=SOPEG_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14380;old_locus_tag=SOPEG_2673 NZ_CP006568.1 Protein Homology CDS 2843871 2845238 . + 0 ID=cds2882;Parent=gene2921;Dbxref=Genbank:WP_025245867.1;Name=WP_025245867.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_025245867.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2845517 2848076 . + . ID=id420;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2845641 2846390 . - . ID=gene2922;Name=SOPEG_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14385;old_locus_tag=SOPEG_2674 NZ_CP006568.1 Protein Homology CDS 2845641 2846390 . - 0 ID=cds2883;Parent=gene2922;Dbxref=Genbank:WP_025245868.1;Name=WP_025245868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245868.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2846402 2846749 . - . ID=gene2923;Name=SOPEG_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23120 NZ_CP006568.1 Protein Homology CDS 2846402 2846749 . - 0 ID=cds2884;Parent=gene2923;Dbxref=Genbank:WP_051419742.1;Name=WP_051419742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419742.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2846828 2847919 . - . ID=gene2924;Name=SOPEG_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14390 NZ_CP006568.1 Protein Homology CDS 2846828 2847919 . - 0 ID=cds2885;Parent=gene2924;Dbxref=Genbank:WP_051419744.1;Name=WP_051419744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419744.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2849518 2850072 . + . ID=gene2925;Name=SOPEG_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14395 NZ_CP006568.1 GeneMarkS+ CDS 2849518 2850072 . + 0 ID=cds2886;Parent=gene2925;Dbxref=Genbank:WP_038468819.1;Name=WP_038468819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468819.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2850046 2853641 . + . ID=id421;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2850280 2850624 . + . ID=gene2926;Name=SOPEG_RS14400;end_range=2850624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14400;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2850280 2850624 . + 0 ID=cds2887;Parent=gene2926;end_range=2850624,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2850788 2852305 . + . ID=gene2927;Name=SOPEG_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14405;old_locus_tag=SOPEG_2678 NZ_CP006568.1 Protein Homology CDS 2850788 2852305 . + 0 ID=cds2888;Parent=gene2927;Dbxref=Genbank:WP_051419746.1;Name=WP_051419746.1;gbkey=CDS;product=transposase;protein_id=WP_051419746.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2852317 2853066 . + . ID=gene2928;Name=SOPEG_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14410;old_locus_tag=SOPEG_2679 NZ_CP006568.1 Protein Homology CDS 2852317 2853066 . + 0 ID=cds2889;Parent=gene2928;Dbxref=Genbank:WP_025245871.1;Name=WP_025245871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2853443 2853583 . + . ID=gene2929;Name=SOPEG_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14415 NZ_CP006568.1 Protein Homology CDS 2853443 2853583 . + 0 ID=cds2890;Parent=gene2929;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2853789 2856297 . + . ID=id422;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2853827 2855035 . - . ID=gene2930;Name=SOPEG_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14420;old_locus_tag=SOPEG_2680 NZ_CP006568.1 Protein Homology CDS 2853827 2855035 . - 0 ID=cds2891;Parent=gene2930;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2855076 2855450 . - . ID=gene2931;Name=SOPEG_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14425 NZ_CP006568.1 Protein Homology CDS 2855076 2855450 . - 0 ID=cds2892;Parent=gene2931;Dbxref=Genbank:WP_025245872.1;Name=WP_025245872.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245872.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2855387 2856220 . - . ID=gene2932;Name=SOPEG_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14430 NZ_CP006568.1 Protein Homology CDS 2855387 2856220 . - 0 ID=cds2893;Parent=gene2932;Dbxref=Genbank:WP_025245873.1;Name=WP_025245873.1;gbkey=CDS;product=transposase;protein_id=WP_025245873.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2856559 2857621 . + . ID=id423;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2856638 2857561 . + . ID=gene2933;Name=SOPEG_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14435;old_locus_tag=SOPEG_2683 NZ_CP006568.1 Protein Homology CDS 2856638 2857561 . + 0 ID=cds2894;Parent=gene2933;Dbxref=Genbank:WP_025245874.1;Name=WP_025245874.1;gbkey=CDS;product=transposase;protein_id=WP_025245874.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2857780 2858073 . + . ID=gene2934;Name=SOPEG_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14440 NZ_CP006568.1 GeneMarkS+ CDS 2857780 2858073 . + 0 ID=cds2895;Parent=gene2934;Dbxref=Genbank:WP_025245875.1;Name=WP_025245875.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245875.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2858290 2859058 . - . ID=gene2935;Name=SOPEG_RS14445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14445;pseudo=true NZ_CP006568.1 Protein Homology CDS 2858290 2859058 . - 0 ID=cds2896;Parent=gene2935;Note=involved in regulation of beta-lactamase%3B putative signaling protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2859090 2859632 . - . ID=gene2936;Name=SOPEG_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14450;old_locus_tag=SOPEG_2685 NZ_CP006568.1 Protein Homology CDS 2859090 2859632 . - 0 ID=cds2897;Parent=gene2936;Dbxref=Genbank:WP_038468823.1;Name=WP_038468823.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_038468823.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2859724 2860620 . + . ID=gene2937;Name=SOPEG_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14455;old_locus_tag=SOPEG_2686 NZ_CP006568.1 Protein Homology CDS 2859724 2860620 . + 0 ID=cds2898;Parent=gene2937;Dbxref=Genbank:WP_025245878.1;Name=WP_025245878.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_025245878.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2860718 2861158 . + . ID=gene2938;Name=SOPEG_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14460;old_locus_tag=SOPEG_2687 NZ_CP006568.1 Protein Homology CDS 2860718 2861158 . + 0 ID=cds2899;Parent=gene2938;Dbxref=Genbank:WP_025245879.1;Name=WP_025245879.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_025245879.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2861335 2861916 . + . ID=gene2939;Name=SOPEG_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14465 NZ_CP006568.1 Protein Homology CDS 2861335 2861916 . + 0 ID=cds2900;Parent=gene2939;Dbxref=Genbank:WP_051419748.1;Name=WP_051419748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419748.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2861916 2862119 . + . ID=gene2940;Name=SOPEG_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14470 NZ_CP006568.1 GeneMarkS+ CDS 2861916 2862119 . + 0 ID=cds2901;Parent=gene2940;Dbxref=Genbank:WP_025245880.1;Name=WP_025245880.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245880.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2862769 2863782 . + . ID=gene2941;Name=SOPEG_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23125;old_locus_tag=SOPEG_2689 NZ_CP006568.1 Protein Homology CDS 2862769 2863782 . + 0 ID=cds2902;Parent=gene2941;Dbxref=Genbank:WP_025245881.1;Name=WP_025245881.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245881.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2864098 2864298 . - . ID=gene2942;Name=SOPEG_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14480 NZ_CP006568.1 GeneMarkS+ CDS 2864098 2864298 . - 0 ID=cds2903;Parent=gene2942;Dbxref=Genbank:WP_025245882.1;Name=WP_025245882.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245882.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2864956 2867737 . + . ID=id424;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2865023 2866208 . + . ID=gene2943;Name=SOPEG_RS14485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14485;pseudo=true NZ_CP006568.1 Protein Homology CDS 2865023 2866208 . + 0 ID=cds2904;Parent=gene2943;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2866610 2867182 . + . ID=gene2944;Name=SOPEG_RS14490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14490;pseudo=true NZ_CP006568.1 Protein Homology CDS 2866610 2867182 . + 0 ID=cds2905;Parent=gene2944;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2867735 2868052 . - . ID=gene2945;Name=SOPEG_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14495;old_locus_tag=SOPEG_2692 NZ_CP006568.1 Protein Homology CDS 2867735 2868052 . - 0 ID=cds2906;Parent=gene2945;Dbxref=Genbank:WP_025245883.1;Name=WP_025245883.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_025245883.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2868377 2869525 . + . ID=gene2946;Name=SOPEG_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14500;old_locus_tag=SOPEG_2693 NZ_CP006568.1 Protein Homology CDS 2868377 2869525 . + 0 ID=cds2907;Parent=gene2946;Dbxref=Genbank:WP_025245884.1;Name=WP_025245884.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=WP_025245884.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2869528 2871948 . + . ID=gene2947;Name=metL;gbkey=Gene;gene=metL;gene_biotype=pseudogene;gene_synonym=metM;locus_tag=SOPEG_RS14505;pseudo=true NZ_CP006568.1 Protein Homology CDS 2869528 2871948 . + 0 ID=cds2908;Parent=gene2947;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=metL;product=aspartate kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2872600 2873522 . + . ID=gene2948;Name=metF;gbkey=Gene;gene=metF;gene_biotype=pseudogene;locus_tag=SOPEG_RS14510;pseudo=true NZ_CP006568.1 Protein Homology CDS 2872600 2873522 . + 0 ID=cds2909;Parent=gene2948;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2873685 2876328 . - . ID=gene2949;Name=SOPEG_RS14515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14515;old_locus_tag=SOPEG_2696;pseudo=true NZ_CP006568.1 Protein Homology CDS 2873685 2876328 . - 0 ID=cds2910;Parent=gene2949;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2876581 2877729 . - . ID=gene2950;Name=SOPEG_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14520;old_locus_tag=SOPEG_2697 NZ_CP006568.1 Protein Homology CDS 2876581 2877729 . - 0 ID=cds2911;Parent=gene2950;Dbxref=Genbank:WP_025245885.1;Name=WP_025245885.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_025245885.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2877921 2878925 . + . ID=gene2951;Name=SOPEG_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14525;old_locus_tag=SOPEG_2698 NZ_CP006568.1 Protein Homology CDS 2877921 2878925 . + 0 ID=cds2912;Parent=gene2951;Dbxref=Genbank:WP_025245886.1;Name=WP_025245886.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_025245886.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2878949 2879722 . + . ID=gene2952;Name=SOPEG_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14530;old_locus_tag=SOPEG_2699 NZ_CP006568.1 Protein Homology CDS 2878949 2879722 . + 0 ID=cds2913;Parent=gene2952;Dbxref=Genbank:WP_038468826.1;Name=WP_038468826.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_038468826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2879855 2881228 . + . ID=gene2953;Name=SOPEG_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14535;old_locus_tag=SOPEG_2700 NZ_CP006568.1 Protein Homology CDS 2879855 2881228 . + 0 ID=cds2914;Parent=gene2953;Dbxref=Genbank:WP_025245888.1;Name=WP_025245888.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_025245888.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2881300 2882034 . - . ID=gene2954;Name=SOPEG_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14540;old_locus_tag=SOPEG_2701 NZ_CP006568.1 Protein Homology CDS 2881300 2882034 . - 0 ID=cds2915;Parent=gene2954;Dbxref=Genbank:WP_025245889.1;Name=WP_025245889.1;gbkey=CDS;product=glutathione peroxidase;protein_id=WP_025245889.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2882178 2883095 . + . ID=gene2955;Name=SOPEG_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14545;old_locus_tag=SOPEG_2702 NZ_CP006568.1 Protein Homology CDS 2882178 2883095 . + 0 ID=cds2916;Parent=gene2955;Dbxref=Genbank:WP_025245890.1;Name=WP_025245890.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245890.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2883078 2884475 . - . ID=gene2956;Name=SOPEG_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14550;old_locus_tag=SOPEG_2703 NZ_CP006568.1 Protein Homology CDS 2883078 2884475 . - 0 ID=cds2917;Parent=gene2956;Dbxref=Genbank:WP_025245891.1;Name=WP_025245891.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=pyridine nucleotide transhydrogenase;protein_id=WP_025245891.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2884720 2885364 . + . ID=gene2957;Name=SOPEG_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14555;old_locus_tag=SOPEG_2704 NZ_CP006568.1 Protein Homology CDS 2884720 2885364 . + 0 ID=cds2918;Parent=gene2957;Dbxref=Genbank:WP_025245892.1;Name=WP_025245892.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245892.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2885368 2885607 . + . ID=gene2958;Name=SOPEG_RS14560;end_range=2885607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14560;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2885368 2885607 . + 0 ID=cds2919;Parent=gene2958;end_range=2885607,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2885736 2886848 . - . ID=gene2959;Name=SOPEG_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14565;old_locus_tag=SOPEG_2706 NZ_CP006568.1 Protein Homology CDS 2885736 2886848 . - 0 ID=cds2920;Parent=gene2959;Dbxref=Genbank:WP_025245894.1;Name=WP_025245894.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA (uracil-5-)-methyltransferase;protein_id=WP_025245894.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2887101 2888987 . + . ID=gene2960;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=SOPEG_RS14570;pseudo=true NZ_CP006568.1 Protein Homology CDS 2887101 2888987 . + 0 ID=cds2921;Parent=gene2960;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12/cobalamin outer membrane transporter;pseudo=true;transl_except=(pos:2888448..2888450%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2888932 2889804 . + . ID=gene2961;Name=SOPEG_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14575;old_locus_tag=SOPEG_2708 NZ_CP006568.1 Protein Homology CDS 2888932 2889804 . + 0 ID=cds2922;Parent=gene2961;Dbxref=Genbank:WP_025245897.1;Name=WP_025245897.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_025245897.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2890199 2893446 . + . ID=id425;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2890518 2892066 . + . ID=gene2962;Name=SOPEG_RS14580;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS14580;old_locus_tag=SOPEG_r2709 NZ_CP006568.1 RefSeq rRNA 2890518 2892066 . + . ID=rna39;Parent=gene2962;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq exon 2890518 2892066 . + . ID=id426;Parent=rna39;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq gene 2892172 2892513 . - . ID=gene2963;Name=SOPEG_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23130 NZ_CP006568.1 Protein Homology CDS 2892172 2892513 . - 0 ID=cds2923;Parent=gene2963;Dbxref=Genbank:WP_025245490.1;Name=WP_025245490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245490.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2892459 2893370 . - . ID=gene2964;Name=SOPEG_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14585 NZ_CP006568.1 Protein Homology CDS 2892459 2893370 . - 0 ID=cds2924;Parent=gene2964;Dbxref=Genbank:WP_025245898.1;Name=WP_025245898.1;gbkey=CDS;product=transposase;protein_id=WP_025245898.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2893465 2893815 . - . ID=gene2965;Name=SOPEG_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14590;old_locus_tag=SOPEG_2711 NZ_CP006568.1 Protein Homology CDS 2893465 2893815 . - 0 ID=cds2925;Parent=gene2965;Dbxref=Genbank:WP_038468830.1;Name=WP_038468830.1;gbkey=CDS;product=phage tail protein;protein_id=WP_038468830.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2893827 2895147 . - . ID=gene2966;Name=SOPEG_RS14595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14595;pseudo=true NZ_CP006568.1 Protein Homology CDS 2893827 2895147 . - 0 ID=cds2926;Parent=gene2966;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2895199 2895810 . - . ID=gene2967;Name=SOPEG_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14600;old_locus_tag=SOPEG_2713 NZ_CP006568.1 Protein Homology CDS 2895199 2895810 . - 0 ID=cds2927;Parent=gene2967;Dbxref=Genbank:WP_038468832.1;Name=WP_038468832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468832.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2895810 2896238 . - . ID=gene2968;Name=SOPEG_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14605;old_locus_tag=SOPEG_2714 NZ_CP006568.1 Protein Homology CDS 2895810 2896238 . - 0 ID=cds2928;Parent=gene2968;Dbxref=Genbank:WP_025245903.1;Name=WP_025245903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245903.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2896241 2897143 . - . ID=gene2969;Name=SOPEG_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14610;old_locus_tag=SOPEG_2715 NZ_CP006568.1 Protein Homology CDS 2896241 2897143 . - 0 ID=cds2929;Parent=gene2969;Dbxref=Genbank:WP_025245904.1;Name=WP_025245904.1;gbkey=CDS;product=head protein;protein_id=WP_025245904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2897157 2897584 . - . ID=gene2970;Name=SOPEG_RS14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14615;pseudo=true NZ_CP006568.1 Protein Homology CDS 2897157 2897584 . - 0 ID=cds2930;Parent=gene2970;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2897581 2897889 . - . ID=gene2971;Name=SOPEG_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23135 NZ_CP006568.1 GeneMarkS+ CDS 2897581 2897889 . - 0 ID=cds2931;Parent=gene2971;Dbxref=Genbank:WP_051419750.1;Name=WP_051419750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419750.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2897861 2898526 . - . ID=gene2972;Name=SOPEG_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14620 NZ_CP006568.1 Protein Homology CDS 2897861 2898526 . - 0 ID=cds2932;Parent=gene2972;Dbxref=Genbank:WP_051419752.1;Name=WP_051419752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419752.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2898800 2899281 . - . ID=gene2973;Name=SOPEG_RS14625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14625;pseudo=true NZ_CP006568.1 Protein Homology CDS 2898800 2899281 . - 0 ID=cds2933;Parent=gene2973;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage morphogenesis protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2899510 2899770 . - . ID=gene2974;Name=SOPEG_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14630 NZ_CP006568.1 GeneMarkS+ CDS 2899510 2899770 . - 0 ID=cds2934;Parent=gene2974;Dbxref=Genbank:WP_038468835.1;Name=WP_038468835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468835.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2899801 2900844 . - . ID=gene2975;Name=SOPEG_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14635 NZ_CP006568.1 Protein Homology CDS 2899801 2900844 . - 0 ID=cds2935;Parent=gene2975;Dbxref=Genbank:WP_051419754.1;Name=WP_051419754.1;gbkey=CDS;product=phage head morphogenesis protein;protein_id=WP_051419754.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2900834 2901397 . - . ID=gene2976;Name=SOPEG_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14640 NZ_CP006568.1 Protein Homology CDS 2900834 2901397 . - 0 ID=cds2936;Parent=gene2976;Dbxref=Genbank:WP_025245905.1;Name=WP_025245905.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245905.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2901348 2903045 . - . ID=gene2977;Name=SOPEG_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14645;old_locus_tag=SOPEG_2721 NZ_CP006568.1 Protein Homology CDS 2901348 2903045 . - 0 ID=cds2937;Parent=gene2977;Dbxref=Genbank:WP_051419756.1;Name=WP_051419756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419756.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2903285 2904346 . + . ID=id427;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2903344 2904267 . - . ID=gene2978;Name=SOPEG_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14650;old_locus_tag=SOPEG_2722 NZ_CP006568.1 Protein Homology CDS 2903344 2904267 . - 0 ID=cds2938;Parent=gene2978;Dbxref=Genbank:WP_025245907.1;Name=WP_025245907.1;gbkey=CDS;product=transposase;protein_id=WP_025245907.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2904340 2904789 . + . ID=gene2979;Name=SOPEG_RS14655;end_range=2904789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14655;partial=true;pseudo=true;start_range=.,2904340 NZ_CP006568.1 Protein Homology CDS 2904340 2904789 . + 0 ID=cds2939;Parent=gene2979;end_range=2904789,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=amylovoran biosynthesis protein AmsL;pseudo=true;start_range=.,2904340;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2904777 2906101 . + . ID=id428;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2904853 2906061 . + . ID=gene2980;Name=SOPEG_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14660;old_locus_tag=SOPEG_2724 NZ_CP006568.1 Protein Homology CDS 2904853 2906061 . + 0 ID=cds2940;Parent=gene2980;Dbxref=Genbank:WP_025245908.1;Name=WP_025245908.1;gbkey=CDS;product=transposase;protein_id=WP_025245908.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2906096 2906647 . + . ID=gene2981;Name=SOPEG_RS14665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14665;partial=true;pseudo=true;start_range=.,2906096 NZ_CP006568.1 Protein Homology CDS 2906096 2906647 . + 0 ID=cds2941;Parent=gene2981;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=amylovoran biosynthesis protein AmsL;pseudo=true;start_range=.,2906096;transl_table=11 NZ_CP006568.1 RefSeq gene 2906867 2908673 . - . ID=gene2982;Name=SOPEG_RS14670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14670;pseudo=true NZ_CP006568.1 Protein Homology CDS 2906867 2908673 . - 0 ID=cds2942;Parent=gene2982;exception=annotated by transcript or proteomic data;gbkey=CDS;product=membrane assembly protein AsmA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2908719 2909300 . - . ID=gene2983;Name=SOPEG_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14675;old_locus_tag=SOPEG_2726 NZ_CP006568.1 Protein Homology CDS 2908719 2909300 . - 0 ID=cds2943;Parent=gene2983;Dbxref=Genbank:WP_025245910.1;Name=WP_025245910.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_025245910.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2909381 2910021 . - . ID=gene2984;Name=SOPEG_RS14680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14680;pseudo=true NZ_CP006568.1 Protein Homology CDS 2909381 2910021 . - 0 ID=cds2944;Parent=gene2984;exception=annotated by transcript or proteomic data;gbkey=CDS;product=uridine kinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2910270 2910936 . + . ID=gene2985;Name=SOPEG_RS14685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14685;pseudo=true NZ_CP006568.1 Protein Homology CDS 2910270 2910936 . + 0 ID=cds2945;Parent=gene2985;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2911049 2912158 . - . ID=gene2986;Name=SOPEG_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14690;old_locus_tag=SOPEG_2729 NZ_CP006568.1 Protein Homology CDS 2911049 2912158 . - 0 ID=cds2946;Parent=gene2986;Dbxref=Genbank:WP_025245911.1;Name=WP_025245911.1;gbkey=CDS;product=antiporter;protein_id=WP_025245911.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2912342 2914381 . + . ID=gene2987;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SOPEG_RS14695;old_locus_tag=SOPEG_2730 NZ_CP006568.1 Protein Homology CDS 2912342 2914381 . + 0 ID=cds2947;Parent=gene2987;Dbxref=Genbank:WP_025245912.1;Name=WP_025245912.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_025245912.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2914578 2915558 . + . ID=gene2988;Name=SOPEG_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14700 NZ_CP006568.1 Protein Homology CDS 2914578 2915558 . + 0 ID=cds2948;Parent=gene2988;Dbxref=Genbank:WP_051419758.1;Name=WP_051419758.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419758.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2915635 2919525 . + . ID=id429;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2915804 2917354 . + . ID=gene2989;Name=SOPEG_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14705;old_locus_tag=SOPEG_2732 NZ_CP006568.1 Protein Homology CDS 2915804 2917354 . + 0 ID=cds2949;Parent=gene2989;Dbxref=Genbank:WP_051419761.1;Name=WP_051419761.1;gbkey=CDS;product=transposase;protein_id=WP_051419761.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2917366 2918115 . + . ID=gene2990;Name=SOPEG_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14710;old_locus_tag=SOPEG_2733 NZ_CP006568.1 Protein Homology CDS 2917366 2918115 . + 0 ID=cds2950;Parent=gene2990;Dbxref=Genbank:WP_025245914.1;Name=WP_025245914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245914.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2918243 2919451 . - . ID=gene2991;Name=SOPEG_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14715;old_locus_tag=SOPEG_2734 NZ_CP006568.1 Protein Homology CDS 2918243 2919451 . - 0 ID=cds2951;Parent=gene2991;Dbxref=Genbank:WP_025245915.1;Name=WP_025245915.1;gbkey=CDS;product=transposase;protein_id=WP_025245915.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2919818 2920069 . - . ID=gene2992;Name=SOPEG_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14720 NZ_CP006568.1 GeneMarkS+ CDS 2919818 2920069 . - 0 ID=cds2952;Parent=gene2992;Dbxref=Genbank:WP_038468841.1;Name=WP_038468841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468841.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2920068 2921009 . + . ID=gene2993;Name=SOPEG_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14725 NZ_CP006568.1 GeneMarkS+ CDS 2920068 2921009 . + 0 ID=cds2953;Parent=gene2993;Dbxref=Genbank:WP_038468844.1;Name=WP_038468844.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468844.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2920963 2922293 . + . ID=id430;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2921000 2922208 . - . ID=gene2994;Name=SOPEG_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14730;old_locus_tag=SOPEG_2736 NZ_CP006568.1 Protein Homology CDS 2921000 2922208 . - 0 ID=cds2954;Parent=gene2994;Dbxref=Genbank:WP_025245918.1;Name=WP_025245918.1;gbkey=CDS;product=transposase;protein_id=WP_025245918.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2922521 2923204 . + . ID=gene2995;Name=SOPEG_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14735;old_locus_tag=SOPEG_2737 NZ_CP006568.1 Protein Homology CDS 2922521 2923204 . + 0 ID=cds2955;Parent=gene2995;Dbxref=Genbank:WP_025245919.1;Name=WP_025245919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245919.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2923282 2924211 . + . ID=gene2996;Name=SOPEG_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14740;old_locus_tag=SOPEG_2738 NZ_CP006568.1 Protein Homology CDS 2923282 2924211 . + 0 ID=cds2956;Parent=gene2996;Dbxref=Genbank:WP_025245920.1;Name=WP_025245920.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_025245920.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2924355 2926137 . + . ID=gene2997;Name=SOPEG_RS14745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14745;pseudo=true NZ_CP006568.1 Protein Homology CDS 2924355 2926137 . + 0 ID=cds2957;Parent=gene2997;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=malate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2926290 2927090 . + . ID=gene2998;Name=SOPEG_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14750;old_locus_tag=SOPEG_2740 NZ_CP006568.1 Protein Homology CDS 2926290 2927090 . + 0 ID=cds2958;Parent=gene2998;Dbxref=Genbank:WP_025245921.1;Name=WP_025245921.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_025245921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2927319 2927771 . - . ID=gene2999;Name=SOPEG_RS14755;end_range=2927771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14755;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2927319 2927771 . - 0 ID=cds2959;Parent=gene2999;end_range=2927771,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2927703 2928767 . + . ID=id431;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2927765 2928688 . - . ID=gene3000;Name=SOPEG_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14760;old_locus_tag=SOPEG_2742 NZ_CP006568.1 Protein Homology CDS 2927765 2928688 . - 0 ID=cds2960;Parent=gene3000;Dbxref=Genbank:WP_025245923.1;Name=WP_025245923.1;gbkey=CDS;product=transposase;protein_id=WP_025245923.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2928764 2929393 . - . ID=gene3001;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=pseudogene;locus_tag=SOPEG_RS14765;partial=true;pseudo=true;start_range=.,2928764 NZ_CP006568.1 Protein Homology CDS 2928764 2929393 . - 0 ID=cds2961;Parent=gene3001;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;exception=unextendable partial coding region;gbkey=CDS;gene=mglC;partial=true;product=beta-methylgalactoside transporter permease;pseudo=true;start_range=.,2928764;transl_table=11 NZ_CP006568.1 RefSeq gene 2929411 2929966 . - . ID=gene3002;Name=SOPEG_RS14770;end_range=2929966,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14770;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2929411 2929966 . - 0 ID=cds2962;Parent=gene3002;end_range=2929966,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2929959 2931024 . + . ID=id432;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2930042 2930965 . + . ID=gene3003;Name=SOPEG_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14775;old_locus_tag=SOPEG_2744 NZ_CP006568.1 Protein Homology CDS 2930042 2930965 . + 0 ID=cds2963;Parent=gene3003;Dbxref=Genbank:WP_025245926.1;Name=WP_025245926.1;gbkey=CDS;product=transposase;protein_id=WP_025245926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2931010 2931462 . - . ID=gene3004;Name=SOPEG_RS14780;end_range=2931462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14780;partial=true;pseudo=true;start_range=.,2931010 NZ_CP006568.1 Protein Homology CDS 2931010 2931462 . - 0 ID=cds2964;Parent=gene3004;end_range=2931462,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sugar ABC transporter ATP-binding protein;pseudo=true;start_range=.,2931010;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2931429 2932493 . + . ID=id433;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2931509 2932432 . + . ID=gene3005;Name=SOPEG_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14785;old_locus_tag=SOPEG_2745 NZ_CP006568.1 Protein Homology CDS 2931509 2932432 . + 0 ID=cds2965;Parent=gene3005;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2932473 2933054 . - . ID=gene3006;Name=SOPEG_RS14790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14790;partial=true;pseudo=true;start_range=.,2932473 NZ_CP006568.1 Protein Homology CDS 2932473 2933054 . - 0 ID=cds2966;Parent=gene3006;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sugar ABC transporter ATP-binding protein;pseudo=true;start_range=.,2932473;transl_table=11 NZ_CP006568.1 RefSeq gene 2933120 2934119 . - . ID=gene3007;Name=SOPEG_RS14795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14795;pseudo=true NZ_CP006568.1 Protein Homology CDS 2933120 2934119 . - 0 ID=cds2967;Parent=gene3007;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2934357 2935397 . - . ID=gene3008;Name=SOPEG_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14800;old_locus_tag=SOPEG_2747 NZ_CP006568.1 Protein Homology CDS 2934357 2935397 . - 0 ID=cds2968;Parent=gene3008;Dbxref=Genbank:WP_025245928.1;Name=WP_025245928.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245928.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2936310 2936702 . + . ID=gene3009;Name=SOPEG_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14805 NZ_CP006568.1 Protein Homology CDS 2936310 2936702 . + 0 ID=cds2969;Parent=gene3009;Dbxref=Genbank:WP_051419763.1;Name=WP_051419763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419763.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2936686 2937746 . + . ID=id434;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2936744 2937667 . - . ID=gene3010;Name=SOPEG_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14810;old_locus_tag=SOPEG_2749 NZ_CP006568.1 Protein Homology CDS 2936744 2937667 . - 0 ID=cds2970;Parent=gene3010;Dbxref=Genbank:WP_025243926.1;Name=WP_025243926.1;gbkey=CDS;product=transposase;protein_id=WP_025243926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2937968 2938195 . + . ID=gene3011;Name=SOPEG_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14815 NZ_CP006568.1 GeneMarkS+ CDS 2937968 2938195 . + 0 ID=cds2971;Parent=gene3011;Dbxref=Genbank:WP_025245930.1;Name=WP_025245930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245930.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2938160 2939489 . + . ID=id435;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2938236 2938612 . + . ID=gene3012;Name=SOPEG_RS14820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14820;pseudo=true NZ_CP006568.1 Protein Homology CDS 2938236 2938612 . + 0 ID=cds2972;Parent=gene3012;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2938671 2939075 . + . ID=gene3013;Name=SOPEG_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14825 NZ_CP006568.1 Protein Homology CDS 2938671 2939075 . + 0 ID=cds2973;Parent=gene3013;Dbxref=Genbank:WP_038468849.1;Name=WP_038468849.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468849.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2939111 2939452 . + . ID=gene3014;Name=SOPEG_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14830 NZ_CP006568.1 Protein Homology CDS 2939111 2939452 . + 0 ID=cds2974;Parent=gene3014;Dbxref=Genbank:WP_038468852.1;Name=WP_038468852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468852.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2940084 2941247 . - . ID=gene3015;Name=SOPEG_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14835;old_locus_tag=SOPEG_2752 NZ_CP006568.1 Protein Homology CDS 2940084 2941247 . - 0 ID=cds2975;Parent=gene3015;Dbxref=Genbank:WP_025245932.1;Name=WP_025245932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245932.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2941306 2941971 . - . ID=gene3016;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SOPEG_RS14840;old_locus_tag=SOPEG_2753 NZ_CP006568.1 Protein Homology CDS 2941306 2941971 . - 0 ID=cds2976;Parent=gene3016;Dbxref=Genbank:WP_025245933.1;Name=WP_025245933.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase;protein_id=WP_025245933.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2942102 2943182 . - . ID=gene3017;Name=SOPEG_RS14845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14845;pseudo=true NZ_CP006568.1 Protein Homology CDS 2942102 2943182 . - 0 ID=cds2977;Parent=gene3017;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2943286 2944227 . + . ID=gene3018;Name=SOPEG_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14850;old_locus_tag=SOPEG_2755 NZ_CP006568.1 Protein Homology CDS 2943286 2944227 . + 0 ID=cds2978;Parent=gene3018;Dbxref=Genbank:WP_025245934.1;Name=WP_025245934.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_025245934.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2944137 2944988 . + . ID=gene3019;Name=SOPEG_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14855 NZ_CP006568.1 Protein Homology CDS 2944137 2944988 . + 0 ID=cds2979;Parent=gene3019;Dbxref=Genbank:WP_025245935.1;Name=WP_025245935.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_025245935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2945004 2945852 . + . ID=gene3020;Name=SOPEG_RS14860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14860;pseudo=true NZ_CP006568.1 Protein Homology CDS 2945004 2945852 . + 0 ID=cds2980;Parent=gene3020;gbkey=CDS;product=S-formylglutathione hydrolase;pseudo=true;transl_except=(pos:2945160..2945162%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2945983 2947956 . - . ID=gene3021;Name=SOPEG_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14865;old_locus_tag=SOPEG_2758 NZ_CP006568.1 Protein Homology CDS 2945983 2947956 . - 0 ID=cds2981;Parent=gene3021;Dbxref=Genbank:WP_025245936.1;Name=WP_025245936.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=outer membrane siderophore receptor;protein_id=WP_025245936.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2948507 2948764 . - . ID=gene3022;Name=SOPEG_RS14870;end_range=2948764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14870;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2948507 2948764 . - 0 ID=cds2982;Parent=gene3022;end_range=2948764,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=iron ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2948763 2951362 . + . ID=id436;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2948962 2950479 . + . ID=gene3023;Name=SOPEG_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14875;old_locus_tag=SOPEG_2760 NZ_CP006568.1 Protein Homology CDS 2948962 2950479 . + 0 ID=cds2983;Parent=gene3023;Dbxref=Genbank:WP_025245938.1;Name=WP_025245938.1;gbkey=CDS;product=transposase;protein_id=WP_025245938.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2950491 2951240 . + . ID=gene3024;Name=SOPEG_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14880;old_locus_tag=SOPEG_2761 NZ_CP006568.1 Protein Homology CDS 2950491 2951240 . + 0 ID=cds2984;Parent=gene3024;Dbxref=Genbank:WP_025245939.1;Name=WP_025245939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2951356 2951898 . - . ID=gene3025;Name=SOPEG_RS14885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14885;partial=true;pseudo=true;start_range=.,2951356 NZ_CP006568.1 Protein Homology CDS 2951356 2951898 . - 0 ID=cds2985;Parent=gene3025;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=iron ABC transporter ATP-binding protein;pseudo=true;start_range=.,2951356;transl_table=11 NZ_CP006568.1 RefSeq gene 2951895 2952968 . - . ID=gene3026;Name=SOPEG_RS14890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14890;pseudo=true NZ_CP006568.1 Protein Homology CDS 2951895 2952968 . - 0 ID=cds2986;Parent=gene3026;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_except=(pos:complement(2952393..2952395)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2953241 2954724 . - . ID=gene3027;Name=SOPEG_RS14895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14895;pseudo=true NZ_CP006568.1 Protein Homology CDS 2953241 2954724 . - 0 ID=cds2987;Parent=gene3027;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lysine transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2954952 2955839 . - . ID=gene3028;Name=SOPEG_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14900;old_locus_tag=SOPEG_2764 NZ_CP006568.1 Protein Homology CDS 2954952 2955839 . - 0 ID=cds2988;Parent=gene3028;Dbxref=Genbank:WP_025245941.1;Name=WP_025245941.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245941.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2955929 2956813 . + . ID=gene3029;Name=SOPEG_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14905;old_locus_tag=SOPEG_2765 NZ_CP006568.1 Protein Homology CDS 2955929 2956813 . + 0 ID=cds2989;Parent=gene3029;Dbxref=Genbank:WP_025245942.1;Name=WP_025245942.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease IV;protein_id=WP_025245942.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2957082 2958643 . - . ID=gene3030;Name=SOPEG_RS14910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14910;pseudo=true NZ_CP006568.1 Protein Homology CDS 2957082 2958643 . - 0 ID=cds2990;Parent=gene3030;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS fructose transporter subunit IIBC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2958656 2959594 . - . ID=gene3031;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=SOPEG_RS14915;old_locus_tag=SOPEG_2767 NZ_CP006568.1 Protein Homology CDS 2958656 2959594 . - 0 ID=cds2991;Parent=gene3031;Dbxref=Genbank:WP_025245943.1;Name=WP_025245943.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_025245943.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2959591 2960673 . - . ID=gene3032;Name=SOPEG_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14920;old_locus_tag=SOPEG_2768 NZ_CP006568.1 Protein Homology CDS 2959591 2960673 . - 0 ID=cds2992;Parent=gene3032;Dbxref=Genbank:WP_025245944.1;Name=WP_025245944.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein;protein_id=WP_025245944.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2961053 2962252 . + . ID=gene3033;Name=SOPEG_RS14925;end_range=2962252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14925;old_locus_tag=SOPEG_2769;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2961053 2962252 . + 0 ID=cds2993;Parent=gene3033;end_range=2962252,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2962359 2962932 . + . ID=gene3034;Name=SOPEG_RS14930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14930;pseudo=true NZ_CP006568.1 Protein Homology CDS 2962359 2962932 . + 0 ID=cds2994;Parent=gene3034;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=elongation factor P;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2963362 2964831 . + . ID=gene3035;Name=SOPEG_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14935;old_locus_tag=SOPEG_2771 NZ_CP006568.1 Protein Homology CDS 2963362 2964831 . + 0 ID=cds2995;Parent=gene3035;Dbxref=Genbank:WP_025245946.1;Name=WP_025245946.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_025245946.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2964844 2965822 . + . ID=gene3036;Name=SOPEG_RS14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14940;pseudo=true NZ_CP006568.1 Protein Homology CDS 2964844 2965822 . + 0 ID=cds2996;Parent=gene3036;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2965871 2966589 . + . ID=gene3037;Name=SOPEG_RS14945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14945;pseudo=true NZ_CP006568.1 Protein Homology CDS 2965871 2966589 . + 0 ID=cds2997;Parent=gene3037;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2966998 2967573 . + . ID=gene3038;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=SOPEG_RS14950;old_locus_tag=SOPEG_2774 NZ_CP006568.1 Protein Homology CDS 2966998 2967573 . + 0 ID=cds2998;Parent=gene3038;Dbxref=Genbank:WP_025245947.1;Name=WP_025245947.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=membrane protein;protein_id=WP_025245947.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2967864 2968103 . - . ID=gene3039;Name=SOPEG_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14955 NZ_CP006568.1 GeneMarkS+ CDS 2967864 2968103 . - 0 ID=cds2999;Parent=gene3039;Dbxref=Genbank:WP_025245948.1;Name=WP_025245948.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245948.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2968108 2968482 . - . ID=gene3040;Name=SOPEG_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23140 NZ_CP006568.1 Protein Homology CDS 2968108 2968482 . - 0 ID=cds3000;Parent=gene3040;Dbxref=Genbank:WP_051419770.1;Name=WP_051419770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419770.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2968489 2968935 . - . ID=gene3041;Name=SOPEG_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23145 NZ_CP006568.1 Protein Homology CDS 2968489 2968935 . - 0 ID=cds3001;Parent=gene3041;Dbxref=Genbank:WP_051419772.1;Name=WP_051419772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419772.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2969083 2970888 . + . ID=gene3042;Name=SOPEG_RS14965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14965;pseudo=true NZ_CP006568.1 Protein Homology CDS 2969083 2970888 . + 0 ID=cds3002;Parent=gene3042;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=antibiotic ABC transporter substrate-binding protein;pseudo=true;transl_except=(pos:2970328..2970330%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2970903 2971997 . + . ID=gene3043;Name=SOPEG_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14970;old_locus_tag=SOPEG_2777 NZ_CP006568.1 Protein Homology CDS 2970903 2971997 . + 0 ID=cds3003;Parent=gene3043;Dbxref=Genbank:WP_025245949.1;Name=WP_025245949.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin ABC transporter permease;protein_id=WP_025245949.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2971994 2973021 . + . ID=gene3044;Name=SOPEG_RS14975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14975;pseudo=true NZ_CP006568.1 Protein Homology CDS 2971994 2973021 . + 0 ID=cds3004;Parent=gene3044;Note=part of the microcin C transport system;exception=annotated by transcript or proteomic data;gbkey=CDS;product=microcin ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2973023 2974633 . + . ID=gene3045;Name=SOPEG_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14980;old_locus_tag=SOPEG_2779 NZ_CP006568.1 Protein Homology CDS 2973023 2974633 . + 0 ID=cds3005;Parent=gene3045;Dbxref=Genbank:WP_025245950.1;Name=WP_025245950.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin ABC transporter ATP-binding protein;protein_id=WP_025245950.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2974787 2975134 . - . ID=gene3046;Name=SOPEG_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14985;old_locus_tag=SOPEG_2780 NZ_CP006568.1 Protein Homology CDS 2974787 2975134 . - 0 ID=cds3006;Parent=gene3046;Dbxref=Genbank:WP_025245951.1;Name=WP_025245951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245951.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2975568 2976746 . - . ID=gene3047;Name=SOPEG_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS14990 NZ_CP006568.1 Protein Homology CDS 2975568 2976746 . - 0 ID=cds3007;Parent=gene3047;Dbxref=Genbank:WP_051419774.1;Name=WP_051419774.1;gbkey=CDS;product=peroxidase;protein_id=WP_051419774.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2976756 2977660 . - . ID=gene3048;Name=SOPEG_RS14995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS14995;pseudo=true NZ_CP006568.1 Protein Homology CDS 2976756 2977660 . - 0 ID=cds3008;Parent=gene3048;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ferrous iron transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2977704 2977916 . - . ID=gene3049;Name=SOPEG_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15000 NZ_CP006568.1 GeneMarkS+ CDS 2977704 2977916 . - 0 ID=cds3009;Parent=gene3049;Dbxref=Genbank:WP_038468856.1;Name=WP_038468856.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468856.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2978149 2978742 . - . ID=gene3050;Name=SOPEG_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15005;old_locus_tag=SOPEG_2783 NZ_CP006568.1 Protein Homology CDS 2978149 2978742 . - 0 ID=cds3010;Parent=gene3050;Dbxref=Genbank:WP_051419776.1;Name=WP_051419776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419776.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2979128 2981170 . + . ID=gene3051;Name=SOPEG_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15010;old_locus_tag=SOPEG_2785 NZ_CP006568.1 Protein Homology CDS 2979128 2981170 . + 0 ID=cds3011;Parent=gene3051;Dbxref=Genbank:WP_025245954.1;Name=WP_025245954.1;gbkey=CDS;product=transposase;protein_id=WP_025245954.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2981071 2982575 . + . ID=id437;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2981182 2982111 . + . ID=gene3052;Name=SOPEG_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15015;old_locus_tag=SOPEG_2786 NZ_CP006568.1 Protein Homology CDS 2981182 2982111 . + 0 ID=cds3012;Parent=gene3052;Dbxref=Genbank:WP_025245955.1;Name=WP_025245955.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025245955.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2982108 2982383 . + . ID=gene3053;Name=SOPEG_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15020;old_locus_tag=SOPEG_2787 NZ_CP006568.1 Protein Homology CDS 2982108 2982383 . + 0 ID=cds3013;Parent=gene3053;Dbxref=Genbank:WP_038468859.1;Name=WP_038468859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468859.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2982595 2984911 . + . ID=id438;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2982677 2983708 . + . ID=gene3054;Name=SOPEG_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15025 NZ_CP006568.1 Protein Homology CDS 2982677 2983708 . + 0 ID=cds3014;Parent=gene3054;Dbxref=Genbank:WP_025245956.1;Name=WP_025245956.1;gbkey=CDS;product=transposase;protein_id=WP_025245956.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2983903 2984526 . - . ID=gene3055;Name=SOPEG_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23150 NZ_CP006568.1 Protein Homology CDS 2983903 2984526 . - 0 ID=cds3015;Parent=gene3055;Dbxref=Genbank:WP_051419778.1;Name=WP_051419778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419778.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2984519 2984833 . - . ID=gene3056;Name=SOPEG_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15030 NZ_CP006568.1 Protein Homology CDS 2984519 2984833 . - 0 ID=cds3016;Parent=gene3056;Dbxref=Genbank:WP_051419780.1;Name=WP_051419780.1;gbkey=CDS;product=transposase;protein_id=WP_051419780.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2984926 2985735 . - . ID=gene3057;Name=SOPEG_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15035 NZ_CP006568.1 Protein Homology CDS 2984926 2985735 . - 0 ID=cds3017;Parent=gene3057;Dbxref=Genbank:WP_025245957.1;Name=WP_025245957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245957.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2984989 2988024 . + . ID=id439;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2985747 2986232 . - . ID=gene3058;Name=SOPEG_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15040 NZ_CP006568.1 Protein Homology CDS 2985747 2986232 . - 0 ID=cds3018;Parent=gene3058;Dbxref=Genbank:WP_051419782.1;Name=WP_051419782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419782.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2986519 2987266 . - . ID=gene3059;Name=SOPEG_RS15045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15045;partial=true;pseudo=true;start_range=.,2986519 NZ_CP006568.1 Protein Homology CDS 2986519 2987266 . - 0 ID=cds3019;Parent=gene3059;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2986519;transl_table=11 NZ_CP006568.1 RefSeq gene 2987404 2987916 . + . ID=gene3060;Name=SOPEG_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15050 NZ_CP006568.1 Protein Homology CDS 2987404 2987916 . + 0 ID=cds3020;Parent=gene3060;Dbxref=Genbank:WP_051419783.1;Name=WP_051419783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419783.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2988064 2988894 . - . ID=gene3061;Name=SOPEG_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15055;old_locus_tag=SOPEG_2793 NZ_CP006568.1 Protein Homology CDS 2988064 2988894 . - 0 ID=cds3021;Parent=gene3061;Dbxref=Genbank:WP_025245959.1;Name=WP_025245959.1;gbkey=CDS;product=iron permease;protein_id=WP_025245959.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2989224 2990302 . - . ID=gene3062;Name=SOPEG_RS15060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15060;pseudo=true NZ_CP006568.1 Protein Homology CDS 2989224 2990302 . - 0 ID=cds3022;Parent=gene3062;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;exception=annotated by transcript or proteomic data;gbkey=CDS;product=bicyclomycin/multidrug efflux system;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2990328 2991035 . - . ID=gene3063;Name=SOPEG_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15065;old_locus_tag=SOPEG_2795 NZ_CP006568.1 Protein Homology CDS 2990328 2991035 . - 0 ID=cds3023;Parent=gene3063;Dbxref=Genbank:WP_025245960.1;Name=WP_025245960.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=16S rRNA pseudouridylate synthase;protein_id=WP_025245960.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2991299 2992827 . + . ID=gene3064;Name=SOPEG_RS15070;end_range=2992827,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15070;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 2991299 2992827 . + 0 ID=cds3024;Parent=gene3064;end_range=2992827,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 2993022 2993306 . + . ID=gene3065;Name=SOPEG_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15075;old_locus_tag=SOPEG_2797 NZ_CP006568.1 Protein Homology CDS 2993022 2993306 . + 0 ID=cds3025;Parent=gene3065;Dbxref=Genbank:WP_025245961.1;Name=WP_025245961.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_025245961.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2993546 2994091 . - . ID=gene3066;Name=SOPEG_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15080 NZ_CP006568.1 GeneMarkS+ CDS 2993546 2994091 . - 0 ID=cds3026;Parent=gene3066;Dbxref=Genbank:WP_025245962.1;Name=WP_025245962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2994161 2994355 . - . ID=gene3067;Name=SOPEG_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15085 NZ_CP006568.1 GeneMarkS+ CDS 2994161 2994355 . - 0 ID=cds3027;Parent=gene3067;Dbxref=Genbank:WP_038468863.1;Name=WP_038468863.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468863.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 2994496 2995816 . + . ID=id440;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 2994591 2995613 . - . ID=gene3068;Name=SOPEG_RS15090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15090;partial=true;pseudo=true;start_range=.,2994591 NZ_CP006568.1 Protein Homology CDS 2994591 2995613 . - 0 ID=cds3028;Parent=gene3068;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2994591;transl_except=(pos:complement(2994868..2994870)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2995649 2996794 . - . ID=gene3069;Name=SOPEG_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15095 NZ_CP006568.1 GeneMarkS+ CDS 2995649 2996794 . - 0 ID=cds3029;Parent=gene3069;Dbxref=Genbank:WP_025245967.1;Name=WP_025245967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245967.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2997204 2998199 . - . ID=gene3070;Name=SOPEG_RS15100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15100;pseudo=true NZ_CP006568.1 Protein Homology CDS 2997204 2998199 . - 0 ID=cds3030;Parent=gene3070;gbkey=CDS;product=nucleoid-associated protein NdpA;pseudo=true;transl_except=(pos:complement(2997366..2997368)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 2998382 2998609 . + . ID=gene3071;Name=SOPEG_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15105;old_locus_tag=SOPEG_2801 NZ_CP006568.1 Protein Homology CDS 2998382 2998609 . + 0 ID=cds3031;Parent=gene3071;Dbxref=Genbank:WP_025245968.1;Name=WP_025245968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 2998630 3000403 . + . ID=gene3072;Name=SOPEG_RS15110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15110;pseudo=true NZ_CP006568.1 Protein Homology CDS 2998630 3000403 . + 0 ID=cds3032;Parent=gene3072;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3000913 3001692 . + . ID=gene3073;Name=SOPEG_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15115;old_locus_tag=SOPEG_2803 NZ_CP006568.1 Protein Homology CDS 3000913 3001692 . + 0 ID=cds3033;Parent=gene3073;Dbxref=Genbank:WP_025245969.1;Name=WP_025245969.1;gbkey=CDS;product=antirepressor;protein_id=WP_025245969.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3002878 3002954 . - . ID=gene3074;Name=SOPEG_RS15120;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS15120;old_locus_tag=SOPEG_t2804 NZ_CP006568.1 tRNAscan-SE tRNA 3002878 3002954 . - . ID=rna40;Parent=gene3074;anticodon=(pos:complement(3002918..3002920));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 tRNAscan-SE exon 3002878 3002954 . - . ID=id441;Parent=rna40;anticodon=(pos:complement(3002918..3002920));gbkey=tRNA;product=tRNA-Pro NZ_CP006568.1 RefSeq gene 3003080 3003433 . - . ID=gene3075;Name=SOPEG_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15125 NZ_CP006568.1 Protein Homology CDS 3003080 3003433 . - 0 ID=cds3034;Parent=gene3075;Dbxref=Genbank:WP_051419787.1;Name=WP_051419787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419787.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3003454 3004515 . + . ID=id442;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3003513 3004436 . - . ID=gene3076;Name=SOPEG_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15130;old_locus_tag=SOPEG_2806 NZ_CP006568.1 Protein Homology CDS 3003513 3004436 . - 0 ID=cds3035;Parent=gene3076;Dbxref=Genbank:WP_025245971.1;Name=WP_025245971.1;gbkey=CDS;product=transposase;protein_id=WP_025245971.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3004526 3004795 . - . ID=gene3077;Name=SOPEG_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15135 NZ_CP006568.1 Protein Homology CDS 3004526 3004795 . - 0 ID=cds3036;Parent=gene3077;Dbxref=Genbank:WP_051419788.1;Name=WP_051419788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419788.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3004914 3006239 . + . ID=id443;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3004999 3006032 . - . ID=gene3078;Name=SOPEG_RS15140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15140;pseudo=true NZ_CP006568.1 Protein Homology CDS 3004999 3006032 . - 0 ID=cds3037;Parent=gene3078;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3006247 3006498 . - . ID=gene3079;Name=SOPEG_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15145;old_locus_tag=SOPEG_2808 NZ_CP006568.1 Protein Homology CDS 3006247 3006498 . - 0 ID=cds3038;Parent=gene3079;Dbxref=Genbank:WP_025245974.1;Name=WP_025245974.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_025245974.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3006500 3007630 . - . ID=gene3080;Name=SOPEG_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15150;old_locus_tag=SOPEG_2809 NZ_CP006568.1 Protein Homology CDS 3006500 3007630 . - 0 ID=cds3039;Parent=gene3080;Dbxref=Genbank:WP_025245975.1;Name=WP_025245975.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_025245975.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3007680 3009962 . - . ID=gene3081;Name=SOPEG_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15155;old_locus_tag=SOPEG_2810 NZ_CP006568.1 Protein Homology CDS 3007680 3009962 . - 0 ID=cds3040;Parent=gene3081;Dbxref=Genbank:WP_025245976.1;Name=WP_025245976.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_025245976.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3010461 3011210 . - . ID=gene3082;Name=SOPEG_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15160;old_locus_tag=SOPEG_2811 NZ_CP006568.1 Protein Homology CDS 3010461 3011210 . - 0 ID=cds3041;Parent=gene3082;Dbxref=Genbank:WP_025245977.1;Name=WP_025245977.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=WP_025245977.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3011454 3014105 . + . ID=gene3083;Name=SOPEG_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15165;old_locus_tag=SOPEG_2812 NZ_CP006568.1 Protein Homology CDS 3011454 3014105 . + 0 ID=cds3042;Parent=gene3083;Dbxref=Genbank:WP_025245978.1;Name=WP_025245978.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_025245978.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3014215 3017076 . + . ID=gene3084;Name=SOPEG_RS15170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15170;pseudo=true NZ_CP006568.1 Protein Homology CDS 3014215 3017076 . + 0 ID=cds3043;Parent=gene3084;gbkey=CDS;product=histidine kinase;pseudo=true;transl_except=(pos:3015979..3015981%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3017446 3018096 . - . ID=gene3085;Name=SOPEG_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15175;old_locus_tag=SOPEG_2814 NZ_CP006568.1 Protein Homology CDS 3017446 3018096 . - 0 ID=cds3044;Parent=gene3085;Dbxref=Genbank:WP_025245979.1;Name=WP_025245979.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025245979.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3018105 3020798 . - . ID=gene3086;Name=SOPEG_RS15180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15180;pseudo=true NZ_CP006568.1 Protein Homology CDS 3018105 3020798 . - 0 ID=cds3045;Parent=gene3086;gbkey=CDS;product=tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase;pseudo=true;transl_except=(pos:complement(3019461..3019463)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3020788 3021941 . - . ID=gene3087;Name=SOPEG_RS15185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15185;pseudo=true NZ_CP006568.1 Protein Homology CDS 3020788 3021941 . - 0 ID=cds3046;Parent=gene3087;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3022261 3022572 . - . ID=gene3088;Name=SOPEG_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15190 NZ_CP006568.1 Protein Homology CDS 3022261 3022572 . - 0 ID=cds3047;Parent=gene3088;Dbxref=Genbank:WP_051419790.1;Name=WP_051419790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419790.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3023290 3024396 . + . ID=gene3089;Name=SOPEG_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15195;old_locus_tag=SOPEG_2818 NZ_CP006568.1 Protein Homology CDS 3023290 3024396 . + 0 ID=cds3048;Parent=gene3089;Dbxref=Genbank:WP_025245980.1;Name=WP_025245980.1;gbkey=CDS;product=membrane protein;protein_id=WP_025245980.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3025097 3025714 . + . ID=gene3090;Name=SOPEG_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15200;old_locus_tag=SOPEG_2819 NZ_CP006568.1 Protein Homology CDS 3025097 3025714 . + 0 ID=cds3049;Parent=gene3090;Dbxref=Genbank:WP_025245981.1;Name=WP_025245981.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_025245981.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3025815 3026519 . + . ID=gene3091;Name=SOPEG_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15205 NZ_CP006568.1 Protein Homology CDS 3025815 3026519 . + 0 ID=cds3050;Parent=gene3091;Dbxref=Genbank:WP_051419792.1;Name=WP_051419792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419792.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3026535 3026816 . + . ID=gene3092;Name=SOPEG_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23155 NZ_CP006568.1 Protein Homology CDS 3026535 3026816 . + 0 ID=cds3051;Parent=gene3092;Dbxref=Genbank:WP_051419794.1;Name=WP_051419794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419794.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3027044 3027970 . + . ID=gene3093;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=SOPEG_RS15210 NZ_CP006568.1 Protein Homology CDS 3027044 3027970 . + 0 ID=cds3052;Parent=gene3093;Dbxref=Genbank:WP_025245982.1;Name=WP_025245982.1;Note=LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons;gbkey=CDS;gene=cbl;product=transcriptional regulator Cbl;protein_id=WP_025245982.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3027913 3031855 . + . ID=id444;gbkey=repeat_region;gene=cbl NZ_CP006568.1 RefSeq gene 3028120 3029466 . + . ID=gene3094;Name=SOPEG_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15215 NZ_CP006568.1 Protein Homology CDS 3028120 3029466 . + 0 ID=cds3053;Parent=gene3094;Dbxref=Genbank:WP_051419796.1;Name=WP_051419796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419796.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3029651 3030406 . + . ID=gene3095;Name=SOPEG_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15220;old_locus_tag=SOPEG_2823 NZ_CP006568.1 Protein Homology CDS 3029651 3030406 . + 0 ID=cds3054;Parent=gene3095;Dbxref=Genbank:WP_038470270.1;Name=WP_038470270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038470270.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3030593 3031801 . + . ID=gene3096;Name=SOPEG_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15225;old_locus_tag=SOPEG_2824 NZ_CP006568.1 Protein Homology CDS 3030593 3031801 . + 0 ID=cds3055;Parent=gene3096;Dbxref=Genbank:WP_025244301.1;Name=WP_025244301.1;gbkey=CDS;product=transposase;protein_id=WP_025244301.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3032782 3033375 . + . ID=gene3097;Name=SOPEG_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15230 NZ_CP006568.1 GeneMarkS+ CDS 3032782 3033375 . + 0 ID=cds3056;Parent=gene3097;Dbxref=Genbank:WP_025245983.1;Name=WP_025245983.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3033496 3034992 . + . ID=gene3098;Name=SOPEG_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15235;old_locus_tag=SOPEG_2826 NZ_CP006568.1 Protein Homology CDS 3033496 3034992 . + 0 ID=cds3057;Parent=gene3098;Dbxref=Genbank:WP_025245984.1;Name=WP_025245984.1;gbkey=CDS;product=MFS transporter;protein_id=WP_025245984.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3035187 3036170 . - . ID=gene3099;Name=SOPEG_RS15240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15240;pseudo=true NZ_CP006568.1 Protein Homology CDS 3035187 3036170 . - 0 ID=cds3058;Parent=gene3099;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3036120..3036122)%2Caa:Other),(pos:complement(3035433..3035435)%2Caa:Other),(pos:complement(3035286..3035288)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3036303 3037671 . - . ID=gene3100;Name=SOPEG_RS15245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15245;pseudo=true NZ_CP006568.1 Protein Homology CDS 3036303 3037671 . - 0 ID=cds3059;Parent=gene3100;exception=annotated by transcript or proteomic data;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3037696 3038388 . - . ID=gene3101;Name=SOPEG_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15250 NZ_CP006568.1 Protein Homology CDS 3037696 3038388 . - 0 ID=cds3060;Parent=gene3101;Dbxref=Genbank:WP_025245985.1;Name=WP_025245985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245985.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3038388 3039233 . - . ID=gene3102;Name=SOPEG_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15255 NZ_CP006568.1 Protein Homology CDS 3038388 3039233 . - 0 ID=cds3061;Parent=gene3102;Dbxref=Genbank:WP_038468868.1;Name=WP_038468868.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=dihydroxynaphthoic acid synthetase;protein_id=WP_038468868.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3039325 3039885 . - . ID=gene3103;Name=SOPEG_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15260 NZ_CP006568.1 Protein Homology CDS 3039325 3039885 . - 0 ID=cds3062;Parent=gene3103;Dbxref=Genbank:WP_051419798.1;Name=WP_051419798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419798.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3040126 3040587 . - . ID=gene3104;Name=SOPEG_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15265 NZ_CP006568.1 GeneMarkS+ CDS 3040126 3040587 . - 0 ID=cds3063;Parent=gene3104;Dbxref=Genbank:WP_038468871.1;Name=WP_038468871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3040644 3040889 . - . ID=gene3105;Name=SOPEG_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23160 NZ_CP006568.1 GeneMarkS+ CDS 3040644 3040889 . - 0 ID=cds3064;Parent=gene3105;Dbxref=Genbank:WP_025245988.1;Name=WP_025245988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245988.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3040963 3041343 . + . ID=gene3106;Name=SOPEG_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23165 NZ_CP006568.1 GeneMarkS+ CDS 3040963 3041343 . + 0 ID=cds3065;Parent=gene3106;Dbxref=Genbank:WP_025245989.1;Name=WP_025245989.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245989.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3041650 3042177 . - . ID=gene3107;Name=SOPEG_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23170;old_locus_tag=SOPEG_ps2833 NZ_CP006568.1 Protein Homology CDS 3041650 3042177 . - 0 ID=cds3066;Parent=gene3107;Dbxref=Genbank:WP_051419800.1;Name=WP_051419800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419800.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3042220 3042600 . + . ID=gene3108;Name=SOPEG_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23175 NZ_CP006568.1 GeneMarkS+ CDS 3042220 3042600 . + 0 ID=cds3067;Parent=gene3108;Dbxref=Genbank:WP_051419802.1;Name=WP_051419802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419802.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3042709 3043029 . - . ID=gene3109;Name=SOPEG_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15280;old_locus_tag=SOPEG_2834 NZ_CP006568.1 Protein Homology CDS 3042709 3043029 . - 0 ID=cds3068;Parent=gene3109;Dbxref=Genbank:WP_025245990.1;Name=WP_025245990.1;gbkey=CDS;product=protein ElaB;protein_id=WP_025245990.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3043192 3044649 . - . ID=gene3110;Name=SOPEG_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15285;old_locus_tag=SOPEG_2835 NZ_CP006568.1 Protein Homology CDS 3043192 3044649 . - 0 ID=cds3069;Parent=gene3110;Dbxref=Genbank:WP_025245991.1;Name=WP_025245991.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=WP_025245991.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3044656 3046188 . - . ID=gene3111;Name=SOPEG_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15290;old_locus_tag=SOPEG_2836 NZ_CP006568.1 Protein Homology CDS 3044656 3046188 . - 0 ID=cds3070;Parent=gene3111;Dbxref=Genbank:WP_025245992.1;Name=WP_025245992.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_025245992.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3046291 3048135 . - . ID=gene3112;Name=SOPEG_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15295;old_locus_tag=SOPEG_2837 NZ_CP006568.1 Protein Homology CDS 3046291 3048135 . - 0 ID=cds3071;Parent=gene3112;Dbxref=Genbank:WP_025245993.1;Name=WP_025245993.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_025245993.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3048132 3048434 . - . ID=gene3113;Name=SOPEG_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15300;old_locus_tag=SOPEG_2838 NZ_CP006568.1 Protein Homology CDS 3048132 3048434 . - 0 ID=cds3072;Parent=gene3113;Dbxref=Genbank:WP_025245994.1;Name=WP_025245994.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit K;protein_id=WP_025245994.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3048431 3048994 . - . ID=gene3114;Name=SOPEG_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15305;old_locus_tag=SOPEG_2839 NZ_CP006568.1 Protein Homology CDS 3048431 3048994 . - 0 ID=cds3073;Parent=gene3114;Dbxref=Genbank:WP_025245995.1;Name=WP_025245995.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_025245995.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3049005 3049547 . - . ID=gene3115;Name=SOPEG_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15310;old_locus_tag=SOPEG_2840 NZ_CP006568.1 Protein Homology CDS 3049005 3049547 . - 0 ID=cds3074;Parent=gene3115;Dbxref=Genbank:WP_025245996.1;Name=WP_025245996.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025245996.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3049562 3050539 . - . ID=gene3116;Name=SOPEG_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15315;old_locus_tag=SOPEG_2841 NZ_CP006568.1 Protein Homology CDS 3049562 3050539 . - 0 ID=cds3075;Parent=gene3116;Dbxref=Genbank:WP_025245997.1;Name=WP_025245997.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_025245997.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3050536 3053265 . - . ID=gene3117;Name=SOPEG_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15320;old_locus_tag=SOPEG_2842 NZ_CP006568.1 Protein Homology CDS 3050536 3053265 . - 0 ID=cds3076;Parent=gene3117;Dbxref=Genbank:WP_025245998.1;Name=WP_025245998.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025245998.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3053372 3054721 . - . ID=gene3118;Name=SOPEG_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15325;old_locus_tag=SOPEG_2843 NZ_CP006568.1 Protein Homology CDS 3053372 3054721 . - 0 ID=cds3077;Parent=gene3118;Dbxref=Genbank:WP_025245999.1;Name=WP_025245999.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025245999.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3054718 3055248 . - . ID=gene3119;Name=SOPEG_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15330;old_locus_tag=SOPEG_2844 NZ_CP006568.1 Protein Homology CDS 3054718 3055248 . - 0 ID=cds3078;Parent=gene3119;Dbxref=Genbank:WP_025246000.1;Name=WP_025246000.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025246000.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3055251 3057050 . - . ID=gene3120;Name=SOPEG_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15335;old_locus_tag=SOPEG_2845 NZ_CP006568.1 Protein Homology CDS 3055251 3057050 . - 0 ID=cds3079;Parent=gene3120;Dbxref=Genbank:WP_025246001.1;Name=WP_025246001.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH:ubiquinone oxidoreductase;protein_id=WP_025246001.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3057129 3057803 . - . ID=gene3121;Name=SOPEG_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15340;old_locus_tag=SOPEG_2846 NZ_CP006568.1 Protein Homology CDS 3057129 3057803 . - 0 ID=cds3080;Parent=gene3121;Dbxref=Genbank:WP_025246002.1;Name=WP_025246002.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_025246002.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3057820 3058257 . - . ID=gene3122;Name=SOPEG_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15345;old_locus_tag=SOPEG_2847 NZ_CP006568.1 Protein Homology CDS 3057820 3058257 . - 0 ID=cds3081;Parent=gene3122;Dbxref=Genbank:WP_025246003.1;Name=WP_025246003.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit A;protein_id=WP_025246003.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3058907 3059845 . - . ID=gene3123;Name=SOPEG_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15350;old_locus_tag=SOPEG_2848 NZ_CP006568.1 Protein Homology CDS 3058907 3059845 . - 0 ID=cds3082;Parent=gene3123;Dbxref=Genbank:WP_025246004.1;Name=WP_025246004.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246004.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3060017 3061081 . + . ID=id445;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3060097 3061020 . + . ID=gene3124;Name=SOPEG_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15355;old_locus_tag=SOPEG_2849 NZ_CP006568.1 Protein Homology CDS 3060097 3061020 . + 0 ID=cds3083;Parent=gene3124;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3061580 3062642 . + . ID=id446;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3061659 3062582 . + . ID=gene3125;Name=SOPEG_RS15360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15360;pseudo=true NZ_CP006568.1 Protein Homology CDS 3061659 3062582 . + 0 ID=cds3084;Parent=gene3125;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3062618 3063368 . + . ID=gene3126;Name=SOPEG_RS15365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15365;partial=true;pseudo=true;start_range=.,3062618 NZ_CP006568.1 Protein Homology CDS 3062618 3063368 . + 0 ID=cds3085;Parent=gene3126;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=aminotransferase;pseudo=true;start_range=.,3062618;transl_except=(pos:3062906..3062908%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3063526 3063768 . + . ID=gene3127;Name=SOPEG_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23180 NZ_CP006568.1 Protein Homology CDS 3063526 3063768 . + 0 ID=cds3086;Parent=gene3127;Dbxref=Genbank:WP_051419804.1;Name=WP_051419804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419804.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3063765 3064364 . + . ID=gene3128;Name=SOPEG_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15370;old_locus_tag=SOPEG_2852 NZ_CP006568.1 Protein Homology CDS 3063765 3064364 . + 0 ID=cds3087;Parent=gene3128;Dbxref=Genbank:WP_025246008.1;Name=WP_025246008.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_025246008.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3064732 3065103 . - . ID=gene3129;Name=SOPEG_RS15375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15375;partial=true;pseudo=true;start_range=.,3064732 NZ_CP006568.1 Protein Homology CDS 3064732 3065103 . - 0 ID=cds3088;Parent=gene3129;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3064732;transl_table=11 NZ_CP006568.1 RefSeq gene 3065449 3066651 . + . ID=gene3130;Name=SOPEG_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15380;old_locus_tag=SOPEG_2855 NZ_CP006568.1 Protein Homology CDS 3065449 3066651 . + 0 ID=cds3089;Parent=gene3130;Dbxref=Genbank:WP_025246010.1;Name=WP_025246010.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_025246010.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3066726 3068861 . + . ID=gene3131;Name=SOPEG_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15385;old_locus_tag=SOPEG_2856 NZ_CP006568.1 Protein Homology CDS 3066726 3068861 . + 0 ID=cds3090;Parent=gene3131;Dbxref=Genbank:WP_038468874.1;Name=WP_038468874.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_038468874.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3069124 3069700 . - . ID=gene3132;Name=SOPEG_RS15390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15390;pseudo=true NZ_CP006568.1 Protein Homology CDS 3069124 3069700 . - 0 ID=cds3091;Parent=gene3132;exception=annotated by transcript or proteomic data;gbkey=CDS;product=NUDIX hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3069784 3070305 . - . ID=gene3133;Name=SOPEG_RS15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15395;pseudo=true NZ_CP006568.1 Protein Homology CDS 3069784 3070305 . - 0 ID=cds3092;Parent=gene3133;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphodiesterase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3070615 3071037 . - . ID=gene3134;Name=SOPEG_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15400 NZ_CP006568.1 GeneMarkS+ CDS 3070615 3071037 . - 0 ID=cds3093;Parent=gene3134;Dbxref=Genbank:WP_038468878.1;Name=WP_038468878.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468878.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3071210 3072112 . + . ID=gene3135;Name=SOPEG_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15405;old_locus_tag=SOPEG_2860 NZ_CP006568.1 Protein Homology CDS 3071210 3072112 . + 0 ID=cds3094;Parent=gene3135;Dbxref=Genbank:WP_025246014.1;Name=WP_025246014.1;gbkey=CDS;product=epimerase;protein_id=WP_025246014.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3072125 3072898 . - . ID=gene3136;Name=SOPEG_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15410;old_locus_tag=SOPEG_2861 NZ_CP006568.1 Protein Homology CDS 3072125 3072898 . - 0 ID=cds3095;Parent=gene3136;Dbxref=Genbank:WP_038468881.1;Name=WP_038468881.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_038468881.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3072977 3074035 . + . ID=id447;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3073035 3073481 . - . ID=gene3137;Name=SOPEG_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15415 NZ_CP006568.1 Protein Homology CDS 3073035 3073481 . - 0 ID=cds3096;Parent=gene3137;Dbxref=Genbank:WP_038468884.1;Name=WP_038468884.1;gbkey=CDS;product=transposase;protein_id=WP_038468884.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3073778 3073957 . - . ID=gene3138;Name=SOPEG_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23185 NZ_CP006568.1 Protein Homology CDS 3073778 3073957 . - 0 ID=cds3097;Parent=gene3138;Dbxref=Genbank:WP_025246017.1;Name=WP_025246017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246017.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3074018 3074682 . - . ID=gene3139;Name=SOPEG_RS15425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15425;pseudo=true NZ_CP006568.1 Protein Homology CDS 3074018 3074682 . - 0 ID=cds3098;Parent=gene3139;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3074679 3075359 . - . ID=gene3140;Name=SOPEG_RS15430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15430;pseudo=true NZ_CP006568.1 Protein Homology CDS 3074679 3075359 . - 0 ID=cds3099;Parent=gene3140;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=amino acid ABC transporter permease;pseudo=true;transl_except=(pos:complement(3075342..3075344)%2Caa:Other),(pos:complement(3075339..3075341)%2Caa:Other),(pos:complement(3075318..3075320)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3075291 3076356 . + . ID=id448;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3075369 3076292 . + . ID=gene3141;Name=SOPEG_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15435;old_locus_tag=SOPEG_2865 NZ_CP006568.1 Protein Homology CDS 3075369 3076292 . + 0 ID=cds3100;Parent=gene3141;Dbxref=Genbank:WP_038468887.1;Name=WP_038468887.1;gbkey=CDS;product=transposase;protein_id=WP_038468887.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3076462 3077706 . + . ID=id449;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3076665 3077669 . + . ID=gene3142;Name=SOPEG_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15440 NZ_CP006568.1 Protein Homology CDS 3076665 3077669 . + 0 ID=cds3101;Parent=gene3142;Dbxref=Genbank:WP_025246018.1;Name=WP_025246018.1;gbkey=CDS;product=transposase;protein_id=WP_025246018.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3077830 3078036 . + . ID=gene3143;Name=SOPEG_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15445 NZ_CP006568.1 GeneMarkS+ CDS 3077830 3078036 . + 0 ID=cds3102;Parent=gene3143;Dbxref=Genbank:WP_025246019.1;Name=WP_025246019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246019.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3078063 3078632 . - . ID=gene3144;Name=SOPEG_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15450;old_locus_tag=SOPEG_2868 NZ_CP006568.1 Protein Homology CDS 3078063 3078632 . - 0 ID=cds3103;Parent=gene3144;Dbxref=Genbank:WP_025246020.1;Name=WP_025246020.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_025246020.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3078759 3080276 . - . ID=gene3145;Name=SOPEG_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15455;old_locus_tag=SOPEG_2869 NZ_CP006568.1 Protein Homology CDS 3078759 3080276 . - 0 ID=cds3104;Parent=gene3145;Dbxref=Genbank:WP_025246021.1;Name=WP_025246021.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_025246021.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3080310 3080798 . - . ID=gene3146;Name=SOPEG_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15460;old_locus_tag=SOPEG_2870 NZ_CP006568.1 Protein Homology CDS 3080310 3080798 . - 0 ID=cds3105;Parent=gene3146;Dbxref=Genbank:WP_025246022.1;Name=WP_025246022.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_025246022.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3081071 3081715 . - . ID=gene3147;Name=SOPEG_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15465;old_locus_tag=SOPEG_2871 NZ_CP006568.1 Protein Homology CDS 3081071 3081715 . - 0 ID=cds3106;Parent=gene3147;Dbxref=Genbank:WP_025246023.1;Name=WP_025246023.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_025246023.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3081705 3082976 . - . ID=gene3148;Name=SOPEG_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15470;old_locus_tag=SOPEG_2872 NZ_CP006568.1 Protein Homology CDS 3081705 3082976 . - 0 ID=cds3107;Parent=gene3148;Dbxref=Genbank:WP_025246024.1;Name=WP_025246024.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_025246024.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3083061 3083981 . - . ID=gene3149;Name=SOPEG_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15475;old_locus_tag=SOPEG_2873 NZ_CP006568.1 Protein Homology CDS 3083061 3083981 . - 0 ID=cds3108;Parent=gene3149;Dbxref=Genbank:WP_025246025.1;Name=WP_025246025.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase subunit beta;protein_id=WP_025246025.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3084182 3084478 . - . ID=gene3150;Name=SOPEG_RS15480;end_range=3084478,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15480;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3084182 3084478 . - 0 ID=cds3109;Parent=gene3150;end_range=3084478,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3084473 3087079 . + . ID=id450;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3084597 3085346 . - . ID=gene3151;Name=SOPEG_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15485;old_locus_tag=SOPEG_2875 NZ_CP006568.1 Protein Homology CDS 3084597 3085346 . - 0 ID=cds3110;Parent=gene3151;Dbxref=Genbank:WP_025246027.1;Name=WP_025246027.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246027.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3085358 3086875 . - . ID=gene3152;Name=SOPEG_RS15490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15490;pseudo=true NZ_CP006568.1 Protein Homology CDS 3085358 3086875 . - 0 ID=cds3111;Parent=gene3152;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(3085682..3085684)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3087078 3087371 . - . ID=gene3153;Name=SOPEG_RS15495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15495;partial=true;pseudo=true;start_range=.,3087078 NZ_CP006568.1 Protein Homology CDS 3087078 3087371 . - 0 ID=cds3112;Parent=gene3153;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3087078;transl_table=11 NZ_CP006568.1 RefSeq gene 3087411 3088223 . - . ID=gene3154;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SOPEG_RS15500;old_locus_tag=SOPEG_2877 NZ_CP006568.1 Protein Homology CDS 3087411 3088223 . - 0 ID=cds3113;Parent=gene3154;Dbxref=Genbank:WP_025246029.1;Name=WP_025246029.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_025246029.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3088262 3089261 . - . ID=gene3155;Name=SOPEG_RS15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15505;pseudo=true NZ_CP006568.1 Protein Homology CDS 3088262 3089261 . - 0 ID=cds3114;Parent=gene3155;exception=annotated by transcript or proteomic data;gbkey=CDS;product=semialdehyde dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3089450 3090577 . - . ID=gene3156;Name=SOPEG_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15510;old_locus_tag=SOPEG_2879 NZ_CP006568.1 Protein Homology CDS 3089450 3090577 . - 0 ID=cds3115;Parent=gene3156;Dbxref=Genbank:WP_025246030.1;Name=WP_025246030.1;Note=catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_025246030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3090868 3091881 . + . ID=gene3157;Name=SOPEG_RS15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15515;pseudo=true NZ_CP006568.1 Protein Homology CDS 3090868 3091881 . + 0 ID=cds3116;Parent=gene3157;gbkey=CDS;product=flagella biosynthesis regulator;pseudo=true;transl_except=(pos:3091288..3091290%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3092089 3093297 . - . ID=gene3158;Name=SOPEG_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15520;old_locus_tag=SOPEG_2881 NZ_CP006568.1 Protein Homology CDS 3092089 3093297 . - 0 ID=cds3117;Parent=gene3158;Dbxref=Genbank:WP_025246031.1;Name=WP_025246031.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246031.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3093477 3094688 . - . ID=gene3159;Name=SOPEG_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15525;old_locus_tag=SOPEG_2882 NZ_CP006568.1 Protein Homology CDS 3093477 3094688 . - 0 ID=cds3118;Parent=gene3159;Dbxref=Genbank:WP_025246032.1;Name=WP_025246032.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_025246032.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3094844 3096524 . + . ID=gene3160;Name=SOPEG_RS15530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15530;pseudo=true NZ_CP006568.1 Protein Homology CDS 3094844 3096524 . + 0 ID=cds3119;Parent=gene3160;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3096738 3097013 . - . ID=gene3161;Name=SOPEG_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15535;old_locus_tag=SOPEG_2884 NZ_CP006568.1 Protein Homology CDS 3096738 3097013 . - 0 ID=cds3120;Parent=gene3161;Dbxref=Genbank:WP_025246033.1;Name=WP_025246033.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246033.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3097041 3097595 . - . ID=gene3162;Name=SOPEG_RS15540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15540;pseudo=true NZ_CP006568.1 Protein Homology CDS 3097041 3097595 . - 0 ID=cds3121;Parent=gene3162;gbkey=CDS;product=elongation factor P hydroxylase;pseudo=true;transl_except=(pos:complement(3097209..3097211)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3097605 3098462 . - . ID=gene3163;Name=SOPEG_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15545;old_locus_tag=SOPEG_2886 NZ_CP006568.1 Protein Homology CDS 3097605 3098462 . - 0 ID=cds3122;Parent=gene3163;Dbxref=Genbank:WP_025246034.1;Name=WP_025246034.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3098534 3099270 . - . ID=gene3164;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=pseudogene;locus_tag=SOPEG_RS15550;pseudo=true NZ_CP006568.1 Protein Homology CDS 3098534 3099270 . - 0 ID=cds3123;Parent=gene3164;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=mepA;product=murein endopeptidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3099357 3100442 . - . ID=gene3165;Name=SOPEG_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15555;old_locus_tag=SOPEG_2888 NZ_CP006568.1 Protein Homology CDS 3099357 3100442 . - 0 ID=cds3124;Parent=gene3165;Dbxref=Genbank:WP_025246035.1;Name=WP_025246035.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_025246035.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3100522 3101454 . - . ID=gene3166;Name=SOPEG_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15560;old_locus_tag=SOPEG_2889 NZ_CP006568.1 Protein Homology CDS 3100522 3101454 . - 0 ID=cds3125;Parent=gene3166;Dbxref=Genbank:WP_025246036.1;Name=WP_025246036.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_025246036.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3101620 3102150 . + . ID=gene3167;Name=SOPEG_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15565;old_locus_tag=SOPEG_2890 NZ_CP006568.1 Protein Homology CDS 3101620 3102150 . + 0 ID=cds3126;Parent=gene3167;Dbxref=Genbank:WP_025246037.1;Name=WP_025246037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246037.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3102228 3102947 . - . ID=gene3168;Name=SOPEG_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15570 NZ_CP006568.1 Protein Homology CDS 3102228 3102947 . - 0 ID=cds3127;Parent=gene3168;Dbxref=Genbank:WP_038468891.1;Name=WP_038468891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468891.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3102978 3105939 . + . ID=id451;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3103060 3103923 . + . ID=gene3169;Name=SOPEG_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15575 NZ_CP006568.1 Protein Homology CDS 3103060 3103923 . + 0 ID=cds3128;Parent=gene3169;Dbxref=Genbank:WP_025246039.1;Name=WP_025246039.1;gbkey=CDS;product=transposase;protein_id=WP_025246039.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3103971 3104621 . + . ID=gene3170;Name=SOPEG_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15580 NZ_CP006568.1 Protein Homology CDS 3103971 3104621 . + 0 ID=cds3129;Parent=gene3170;Dbxref=Genbank:WP_025246040.1;Name=WP_025246040.1;gbkey=CDS;product=transposase;protein_id=WP_025246040.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3104726 3104944 . - . ID=gene3171;Name=SOPEG_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15585 NZ_CP006568.1 Protein Homology CDS 3104726 3104944 . - 0 ID=cds3130;Parent=gene3171;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3105013 3105486 . - . ID=gene3172;Name=SOPEG_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15590 NZ_CP006568.1 Protein Homology CDS 3105013 3105486 . - 0 ID=cds3131;Parent=gene3172;Dbxref=Genbank:WP_025246041.1;Name=WP_025246041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246041.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3105601 3105879 . - . ID=gene3173;Name=SOPEG_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15595 NZ_CP006568.1 Protein Homology CDS 3105601 3105879 . - 0 ID=cds3132;Parent=gene3173;Dbxref=Genbank:WP_025246042.1;Name=WP_025246042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246042.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3105950 3106221 . + . ID=id452;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3106021 3106161 . + . ID=gene3174;Name=SOPEG_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15600 NZ_CP006568.1 Protein Homology CDS 3106021 3106161 . + 0 ID=cds3133;Parent=gene3174;Dbxref=Genbank:WP_038468895.1;Name=WP_038468895.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468895.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3107049 3107516 . - . ID=gene3175;Name=SOPEG_RS15605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15605;old_locus_tag=SOPEG_2895;partial=true;pseudo=true;start_range=.,3107049 NZ_CP006568.1 Protein Homology CDS 3107049 3107516 . - 0 ID=cds3134;Parent=gene3175;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phosphohistidine phosphatase;pseudo=true;start_range=.,3107049;transl_table=11 NZ_CP006568.1 RefSeq gene 3107893 3108177 . - . ID=gene3176;Name=SOPEG_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15610;old_locus_tag=SOPEG_2896 NZ_CP006568.1 Protein Homology CDS 3107893 3108177 . - 0 ID=cds3135;Parent=gene3176;Dbxref=Genbank:WP_025246044.1;Name=WP_025246044.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246044.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3108551 3109309 . - . ID=gene3177;Name=SOPEG_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15615;old_locus_tag=SOPEG_2897 NZ_CP006568.1 Protein Homology CDS 3108551 3109309 . - 0 ID=cds3136;Parent=gene3177;Dbxref=Genbank:WP_025246045.1;Name=WP_025246045.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246045.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3109343 3110517 . - . ID=gene3178;Name=SOPEG_RS15620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15620;pseudo=true NZ_CP006568.1 Protein Homology CDS 3109343 3110517 . - 0 ID=cds3137;Parent=gene3178;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3110514 3110981 . - . ID=gene3179;Name=SOPEG_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15625;old_locus_tag=SOPEG_2899 NZ_CP006568.1 Protein Homology CDS 3110514 3110981 . - 0 ID=cds3138;Parent=gene3179;Dbxref=Genbank:WP_025246046.1;Name=WP_025246046.1;gbkey=CDS;product=cytochrome C;protein_id=WP_025246046.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3110981 3111535 . - . ID=gene3180;Name=SOPEG_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15630;old_locus_tag=SOPEG_2900 NZ_CP006568.1 Protein Homology CDS 3110981 3111535 . - 0 ID=cds3139;Parent=gene3180;Dbxref=Genbank:WP_025246047.1;Name=WP_025246047.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_025246047.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3111532 3113502 . - . ID=gene3181;Name=SOPEG_RS15635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15635;pseudo=true NZ_CP006568.1 Protein Homology CDS 3111532 3113502 . - 0 ID=cds3140;Parent=gene3181;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cytochrome C biogenesis protein CcmF;pseudo=true;transl_except=(pos:complement(3112794..3112796)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3113499 3113972 . - . ID=gene3182;Name=SOPEG_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15640;old_locus_tag=SOPEG_2902 NZ_CP006568.1 Protein Homology CDS 3113499 3113972 . - 0 ID=cds3141;Parent=gene3182;Dbxref=Genbank:WP_025246048.1;Name=WP_025246048.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome C biogenesis protein CcmE;protein_id=WP_025246048.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3113969 3114196 . - . ID=gene3183;Name=SOPEG_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15645;old_locus_tag=SOPEG_2903 NZ_CP006568.1 Protein Homology CDS 3113969 3114196 . - 0 ID=cds3142;Parent=gene3183;Dbxref=Genbank:WP_025246049.1;Name=WP_025246049.1;gbkey=CDS;product=heme exporter protein CcmD;protein_id=WP_025246049.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3114193 3114909 . - . ID=gene3184;Name=SOPEG_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15650;old_locus_tag=SOPEG_2904 NZ_CP006568.1 Protein Homology CDS 3114193 3114909 . - 0 ID=cds3143;Parent=gene3184;Dbxref=Genbank:WP_025246050.1;Name=WP_025246050.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme ABC transporter permease;protein_id=WP_025246050.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3114994 3115643 . - . ID=gene3185;Name=SOPEG_RS15655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15655;pseudo=true NZ_CP006568.1 Protein Homology CDS 3114994 3115643 . - 0 ID=cds3144;Parent=gene3185;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;exception=annotated by transcript or proteomic data;gbkey=CDS;product=heme ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3115631 3116269 . - . ID=gene3186;Name=SOPEG_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15660;old_locus_tag=SOPEG_2906 NZ_CP006568.1 Protein Homology CDS 3115631 3116269 . - 0 ID=cds3145;Parent=gene3186;Dbxref=Genbank:WP_025246051.1;Name=WP_025246051.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmA;protein_id=WP_025246051.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3116579 3117526 . + . ID=gene3187;Name=SOPEG_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15665;old_locus_tag=SOPEG_2907 NZ_CP006568.1 Protein Homology CDS 3116579 3117526 . + 0 ID=cds3146;Parent=gene3187;Dbxref=Genbank:WP_051420008.1;Name=WP_051420008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420008.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3117744 3117818 . + . ID=gene3188;Name=SOPEG_RS15670;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS15670;old_locus_tag=SOPEG_t2908 NZ_CP006568.1 tRNAscan-SE tRNA 3117744 3117818 . + . ID=rna41;Parent=gene3188;anticodon=(pos:3117777..3117779);gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 tRNAscan-SE exon 3117744 3117818 . + . ID=id453;Parent=rna41;anticodon=(pos:3117777..3117779);gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 RefSeq gene 3118304 3118495 . + . ID=gene3189;Name=SOPEG_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23190 NZ_CP006568.1 GeneMarkS+ CDS 3118304 3118495 . + 0 ID=cds3147;Parent=gene3189;Dbxref=Genbank:WP_051419806.1;Name=WP_051419806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419806.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3118902 3120230 . + . ID=id454;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3118981 3120192 . + . ID=gene3190;Name=SOPEG_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15680;old_locus_tag=SOPEG_2909 NZ_CP006568.1 Protein Homology CDS 3118981 3120192 . + 0 ID=cds3148;Parent=gene3190;Dbxref=Genbank:WP_025246054.1;Name=WP_025246054.1;gbkey=CDS;product=transposase;protein_id=WP_025246054.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3120189 3121136 . + . ID=gene3191;Name=SOPEG_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15685 NZ_CP006568.1 Protein Homology CDS 3120189 3121136 . + 0 ID=cds3149;Parent=gene3191;Dbxref=Genbank:WP_051419807.1;Name=WP_051419807.1;gbkey=CDS;product=transposase;protein_id=WP_051419807.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3121088 3122410 . + . ID=id455;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3121127 3122335 . - . ID=gene3192;Name=SOPEG_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15690;old_locus_tag=SOPEG_2911 NZ_CP006568.1 Protein Homology CDS 3121127 3122335 . - 0 ID=cds3150;Parent=gene3192;Dbxref=Genbank:WP_025246056.1;Name=WP_025246056.1;gbkey=CDS;product=transposase;protein_id=WP_025246056.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3122583 3124656 . + . ID=id456;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3122642 3122788 . - . ID=gene3193;Name=SOPEG_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15695 NZ_CP006568.1 Protein Homology CDS 3122642 3122788 . - 0 ID=cds3151;Parent=gene3193;Dbxref=Genbank:WP_051420009.1;Name=WP_051420009.1;gbkey=CDS;product=cytoplasmic protein;protein_id=WP_051420009.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3123026 3123571 . - . ID=gene3194;Name=SOPEG_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15700 NZ_CP006568.1 Protein Homology CDS 3123026 3123571 . - 0 ID=cds3152;Parent=gene3194;Dbxref=Genbank:WP_038468898.1;Name=WP_038468898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468898.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3123652 3124575 . - . ID=gene3195;Name=SOPEG_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15705;old_locus_tag=SOPEG_2913 NZ_CP006568.1 Protein Homology CDS 3123652 3124575 . - 0 ID=cds3153;Parent=gene3195;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3124767 3125829 . + . ID=id457;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3124827 3125750 . - . ID=gene3196;Name=SOPEG_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15710;old_locus_tag=SOPEG_2914 NZ_CP006568.1 Protein Homology CDS 3124827 3125750 . - 0 ID=cds3154;Parent=gene3196;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3126060 3126332 . + . ID=gene3197;Name=SOPEG_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15715 NZ_CP006568.1 GeneMarkS+ CDS 3126060 3126332 . + 0 ID=cds3155;Parent=gene3197;Dbxref=Genbank:WP_025246057.1;Name=WP_025246057.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246057.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3126334 3126600 . - . ID=gene3198;Name=SOPEG_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15720 NZ_CP006568.1 GeneMarkS+ CDS 3126334 3126600 . - 0 ID=cds3156;Parent=gene3198;Dbxref=Genbank:WP_038468900.1;Name=WP_038468900.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468900.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3127474 3130079 . + . ID=id458;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3127679 3129196 . + . ID=gene3199;Name=SOPEG_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15725;old_locus_tag=SOPEG_2915 NZ_CP006568.1 Protein Homology CDS 3127679 3129196 . + 0 ID=cds3157;Parent=gene3199;Dbxref=Genbank:WP_051419809.1;Name=WP_051419809.1;gbkey=CDS;product=transposase;protein_id=WP_051419809.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3129208 3129450 . + . ID=gene3200;Name=SOPEG_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15730 NZ_CP006568.1 Protein Homology CDS 3129208 3129450 . + 0 ID=cds3158;Parent=gene3200;Dbxref=Genbank:WP_038468903.1;Name=WP_038468903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468903.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3129462 3129957 . + . ID=gene3201;Name=SOPEG_RS15735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15735;pseudo=true NZ_CP006568.1 Protein Homology CDS 3129462 3129957 . + 0 ID=cds3159;Parent=gene3201;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3130220 3130408 . + . ID=gene3202;Name=SOPEG_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15740;old_locus_tag=SOPEG_2917 NZ_CP006568.1 Protein Homology CDS 3130220 3130408 . + 0 ID=cds3160;Parent=gene3202;Dbxref=Genbank:WP_025246059.1;Name=WP_025246059.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246059.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3130542 3131862 . + . ID=id459;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3130578 3131786 . - . ID=gene3203;Name=SOPEG_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15745;old_locus_tag=SOPEG_2918 NZ_CP006568.1 Protein Homology CDS 3130578 3131786 . - 0 ID=cds3161;Parent=gene3203;Dbxref=Genbank:WP_025246060.1;Name=WP_025246060.1;gbkey=CDS;product=transposase;protein_id=WP_025246060.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3132277 3132594 . + . ID=gene3204;Name=SOPEG_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15750;old_locus_tag=SOPEG_2919 NZ_CP006568.1 Protein Homology CDS 3132277 3132594 . + 0 ID=cds3162;Parent=gene3204;Dbxref=Genbank:WP_025246061.1;Name=WP_025246061.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=multidrug transporter;protein_id=WP_025246061.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3133123 3134324 . - . ID=gene3205;Name=SOPEG_RS15755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15755;pseudo=true NZ_CP006568.1 Protein Homology CDS 3133123 3134324 . - 0 ID=cds3163;Parent=gene3205;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutamate-pyruvate aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3134542 3134727 . + . ID=gene3206;Name=SOPEG_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15760 NZ_CP006568.1 Protein Homology CDS 3134542 3134727 . + 0 ID=cds3164;Parent=gene3206;Dbxref=Genbank:WP_025246062.1;Name=WP_025246062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246062.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3134939 3135646 . + . ID=gene3207;Name=SOPEG_RS15765;end_range=3135646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15765;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3134939 3135646 . + 0 ID=cds3165;Parent=gene3207;end_range=3135646,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3135643 3136702 . + . ID=id460;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3135702 3135842 . - . ID=gene3208;Name=SOPEG_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15770 NZ_CP006568.1 Protein Homology CDS 3135702 3135842 . - 0 ID=cds3166;Parent=gene3208;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3135995 3136624 . - . ID=gene3209;Name=SOPEG_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15775 NZ_CP006568.1 Protein Homology CDS 3135995 3136624 . - 0 ID=cds3167;Parent=gene3209;Dbxref=Genbank:WP_038468910.1;Name=WP_038468910.1;gbkey=CDS;product=transposase;protein_id=WP_038468910.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3136700 3137600 . + . ID=gene3210;Name=SOPEG_RS15780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15780;partial=true;pseudo=true;start_range=.,3136700 NZ_CP006568.1 Protein Homology CDS 3136700 3137600 . + 0 ID=cds3168;Parent=gene3210;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=L-glyceraldehyde 3-phosphate reductase;pseudo=true;start_range=.,3136700;transl_table=11 NZ_CP006568.1 RefSeq gene 3137602 3138840 . - . ID=gene3211;Name=SOPEG_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15785;old_locus_tag=SOPEG_2924 NZ_CP006568.1 Protein Homology CDS 3137602 3138840 . - 0 ID=cds3169;Parent=gene3211;Dbxref=Genbank:WP_025246064.1;Name=WP_025246064.1;gbkey=CDS;product=manganese transporter MntH;protein_id=WP_025246064.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3139217 3140401 . + . ID=gene3212;Name=SOPEG_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15790;old_locus_tag=SOPEG_2925 NZ_CP006568.1 Protein Homology CDS 3139217 3140401 . + 0 ID=cds3170;Parent=gene3212;Dbxref=Genbank:WP_025246065.1;Name=WP_025246065.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_025246065.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3140530 3140605 . - . ID=gene3213;Name=SOPEG_RS15795;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS15795;old_locus_tag=SOPEG_t2926 NZ_CP006568.1 tRNAscan-SE tRNA 3140530 3140605 . - . ID=rna42;Parent=gene3213;anticodon=(pos:complement(3140570..3140572));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 tRNAscan-SE exon 3140530 3140605 . - . ID=id461;Parent=rna42;anticodon=(pos:complement(3140570..3140572));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 RefSeq gene 3140732 3142138 . - . ID=gene3214;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SOPEG_RS15800;old_locus_tag=SOPEG_2927 NZ_CP006568.1 Protein Homology CDS 3140732 3142138 . - 0 ID=cds3171;Parent=gene3214;Dbxref=Genbank:WP_025246066.1;Name=WP_025246066.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_025246066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3142385 3142460 . + . ID=gene3215;Name=SOPEG_RS15805;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS15805;old_locus_tag=SOPEG_t2928 NZ_CP006568.1 tRNAscan-SE tRNA 3142385 3142460 . + . ID=rna43;Parent=gene3215;anticodon=(pos:3142418..3142420);gbkey=tRNA;product=tRNA-Val NZ_CP006568.1 tRNAscan-SE exon 3142385 3142460 . + . ID=id462;Parent=rna43;anticodon=(pos:3142418..3142420);gbkey=tRNA;product=tRNA-Val NZ_CP006568.1 RefSeq gene 3142479 3142554 . + . ID=gene3216;Name=SOPEG_RS15810;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS15810;old_locus_tag=SOPEG_t2929 NZ_CP006568.1 tRNAscan-SE tRNA 3142479 3142554 . + . ID=rna44;Parent=gene3216;anticodon=(pos:3142512..3142514);gbkey=tRNA;product=tRNA-Lys NZ_CP006568.1 tRNAscan-SE exon 3142479 3142554 . + . ID=id463;Parent=rna44;anticodon=(pos:3142512..3142514);gbkey=tRNA;product=tRNA-Lys NZ_CP006568.1 RefSeq gene 3143595 3143879 . + . ID=gene3217;Name=SOPEG_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15815 NZ_CP006568.1 GeneMarkS+ CDS 3143595 3143879 . + 0 ID=cds3172;Parent=gene3217;Dbxref=Genbank:WP_025246067.1;Name=WP_025246067.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246067.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3143865 3144928 . + . ID=id464;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3143945 3144868 . + . ID=gene3218;Name=SOPEG_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15820;old_locus_tag=SOPEG_2931 NZ_CP006568.1 Protein Homology CDS 3143945 3144868 . + 0 ID=cds3173;Parent=gene3218;Dbxref=Genbank:WP_025246068.1;Name=WP_025246068.1;gbkey=CDS;product=transposase;protein_id=WP_025246068.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3145032 3145235 . + . ID=gene3219;Name=SOPEG_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15825 NZ_CP006568.1 GeneMarkS+ CDS 3145032 3145235 . + 0 ID=cds3174;Parent=gene3219;Dbxref=Genbank:WP_025246069.1;Name=WP_025246069.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246069.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3145588 3146997 . - . ID=gene3220;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=SOPEG_RS15830;pseudo=true NZ_CP006568.1 Protein Homology CDS 3145588 3146997 . - 0 ID=cds3175;Parent=gene3220;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=emrB;product=multidrug resistance protein B;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3147010 3148245 . - . ID=gene3221;Name=SOPEG_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15835;old_locus_tag=SOPEG_2933 NZ_CP006568.1 Protein Homology CDS 3147010 3148245 . - 0 ID=cds3176;Parent=gene3221;Dbxref=Genbank:WP_025246070.1;Name=WP_025246070.1;gbkey=CDS;product=hemolysin D;protein_id=WP_025246070.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3148267 3149514 . - . ID=gene3222;Name=SOPEG_RS15840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15840;pseudo=true NZ_CP006568.1 Protein Homology CDS 3148267 3149514 . - 0 ID=cds3177;Parent=gene3222;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug RND transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3149530 3149979 . - . ID=gene3223;Name=SOPEG_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15845;old_locus_tag=SOPEG_2935 NZ_CP006568.1 Protein Homology CDS 3149530 3149979 . - 0 ID=cds3178;Parent=gene3223;Dbxref=Genbank:WP_038468914.1;Name=WP_038468914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468914.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3150360 3150767 . - . ID=gene3224;Name=SOPEG_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15850;old_locus_tag=SOPEG_2936 NZ_CP006568.1 Protein Homology CDS 3150360 3150767 . - 0 ID=cds3179;Parent=gene3224;Dbxref=Genbank:WP_025246071.1;Name=WP_025246071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246071.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3151146 3151499 . + . ID=gene3225;Name=SOPEG_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15855 NZ_CP006568.1 GeneMarkS+ CDS 3151146 3151499 . + 0 ID=cds3180;Parent=gene3225;Dbxref=Genbank:WP_025246072.1;Name=WP_025246072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246072.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3151775 3152800 . + . ID=gene3226;Name=SOPEG_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15860;old_locus_tag=SOPEG_2937 NZ_CP006568.1 Protein Homology CDS 3151775 3152800 . + 0 ID=cds3181;Parent=gene3226;Dbxref=Genbank:WP_025246073.1;Name=WP_025246073.1;gbkey=CDS;product=lipoprotein;protein_id=WP_025246073.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3152865 3154481 . + . ID=gene3227;Name=SOPEG_RS15865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15865;pseudo=true NZ_CP006568.1 Protein Homology CDS 3152865 3154481 . + 0 ID=cds3182;Parent=gene3227;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter;pseudo=true;transl_except=(pos:3153888..3153890%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3154547 3155587 . + . ID=gene3228;Name=SOPEG_RS15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15870;old_locus_tag=SOPEG_2939;partial=true;pseudo=true;start_range=.,3154547 NZ_CP006568.1 Protein Homology CDS 3154547 3155587 . + 0 ID=cds3183;Parent=gene3228;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,3154547;transl_table=11 NZ_CP006568.1 RefSeq gene 3155607 3156476 . + . ID=gene3229;Name=SOPEG_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15875;old_locus_tag=SOPEG_2940 NZ_CP006568.1 Protein Homology CDS 3155607 3156476 . + 0 ID=cds3184;Parent=gene3229;Dbxref=Genbank:WP_025246075.1;Name=WP_025246075.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246075.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3156773 3156988 . - . ID=gene3230;Name=SOPEG_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15880;old_locus_tag=SOPEG_2941 NZ_CP006568.1 Protein Homology CDS 3156773 3156988 . - 0 ID=cds3185;Parent=gene3230;Dbxref=Genbank:WP_025246076.1;Name=WP_025246076.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246076.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3157011 3159035 . - . ID=gene3231;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SOPEG_RS15885;old_locus_tag=SOPEG_2942 NZ_CP006568.1 Protein Homology CDS 3157011 3159035 . - 0 ID=cds3186;Parent=gene3231;Dbxref=Genbank:WP_025246077.1;Name=WP_025246077.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=WP_025246077.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3159291 3160304 . - . ID=gene3232;Name=SOPEG_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15890;old_locus_tag=SOPEG_2943 NZ_CP006568.1 Protein Homology CDS 3159291 3160304 . - 0 ID=cds3187;Parent=gene3232;Dbxref=Genbank:WP_025246078.1;Name=WP_025246078.1;gbkey=CDS;product=cell division protein ZipA;protein_id=WP_025246078.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3160458 3161524 . + . ID=id465;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3160540 3161463 . + . ID=gene3233;Name=SOPEG_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15895;old_locus_tag=SOPEG_2944 NZ_CP006568.1 Protein Homology CDS 3160540 3161463 . + 0 ID=cds3188;Parent=gene3233;Dbxref=Genbank:WP_025246079.1;Name=WP_025246079.1;gbkey=CDS;product=transposase;protein_id=WP_025246079.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3161589 3162362 . + . ID=gene3234;Name=SOPEG_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15900;old_locus_tag=SOPEG_2945 NZ_CP006568.1 Protein Homology CDS 3161589 3162362 . + 0 ID=cds3189;Parent=gene3234;Dbxref=Genbank:WP_051419812.1;Name=WP_051419812.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_051419812.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3162522 3166449 . + . ID=id466;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3162599 3163330 . + . ID=gene3235;Name=SOPEG_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15905 NZ_CP006568.1 Protein Homology CDS 3162599 3163330 . + 0 ID=cds3190;Parent=gene3235;Dbxref=Genbank:WP_025246081.1;Name=WP_025246081.1;gbkey=CDS;product=transposase;protein_id=WP_025246081.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3163286 3164035 . - . ID=gene3236;Name=SOPEG_RS15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15910;pseudo=true NZ_CP006568.1 Protein Homology CDS 3163286 3164035 . - 0 ID=cds3191;Parent=gene3236;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3163847..3163849)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3164126 3164320 . - . ID=gene3237;Name=SOPEG_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23195 NZ_CP006568.1 Protein Homology CDS 3164126 3164320 . - 0 ID=cds3192;Parent=gene3237;Dbxref=Genbank:WP_051419695.1;Name=WP_051419695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419695.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3164566 3165564 . - . ID=gene3238;Name=SOPEG_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23200 NZ_CP006568.1 Protein Homology CDS 3164566 3165564 . - 0 ID=cds3193;Parent=gene3238;Dbxref=Genbank:WP_051419813.1;Name=WP_051419813.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419813.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3165750 3166412 . + . ID=gene3239;Name=SOPEG_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15920 NZ_CP006568.1 Protein Homology CDS 3165750 3166412 . + 0 ID=cds3194;Parent=gene3239;Dbxref=Genbank:WP_025246082.1;Name=WP_025246082.1;gbkey=CDS;product=transposase;protein_id=WP_025246082.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3166527 3167123 . + . ID=gene3240;Name=SOPEG_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15925;old_locus_tag=SOPEG_2949 NZ_CP006568.1 Protein Homology CDS 3166527 3167123 . + 0 ID=cds3195;Parent=gene3240;Dbxref=Genbank:WP_025246083.1;Name=WP_025246083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246083.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3167166 3168654 . + . ID=id467;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3167203 3168294 . - . ID=gene3241;Name=SOPEG_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15930 NZ_CP006568.1 Protein Homology CDS 3167203 3168294 . - 0 ID=cds3196;Parent=gene3241;Dbxref=Genbank:WP_025246084.1;Name=WP_025246084.1;gbkey=CDS;product=transposase;protein_id=WP_025246084.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3168493 3168942 . - . ID=gene3242;Name=SOPEG_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15935;old_locus_tag=SOPEG_2951 NZ_CP006568.1 Protein Homology CDS 3168493 3168942 . - 0 ID=cds3197;Parent=gene3242;Dbxref=Genbank:WP_025246085.1;Name=WP_025246085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246085.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3168785 3171982 . + . ID=id468;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3169220 3169486 . + . ID=gene3243;Name=SOPEG_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15940;old_locus_tag=SOPEG_2952 NZ_CP006568.1 Protein Homology CDS 3169220 3169486 . + 0 ID=cds3198;Parent=gene3243;Dbxref=Genbank:WP_025246086.1;Name=WP_025246086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246086.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3169577 3170002 . + . ID=gene3244;Name=SOPEG_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15945;old_locus_tag=SOPEG_2953 NZ_CP006568.1 Protein Homology CDS 3169577 3170002 . + 0 ID=cds3199;Parent=gene3244;Dbxref=Genbank:WP_025246087.1;Name=WP_025246087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246087.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3170013 3170240 . + . ID=gene3245;Name=SOPEG_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15950;old_locus_tag=SOPEG_2954 NZ_CP006568.1 Protein Homology CDS 3170013 3170240 . + 0 ID=cds3200;Parent=gene3245;Dbxref=Genbank:WP_025246088.1;Name=WP_025246088.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246088.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3170244 3171870 . + . ID=gene3246;Name=SOPEG_RS15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15955;pseudo=true NZ_CP006568.1 Protein Homology CDS 3170244 3171870 . + 0 ID=cds3201;Parent=gene3246;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3171867 3172097 . + . ID=gene3247;Name=SOPEG_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15960;old_locus_tag=SOPEG_2956 NZ_CP006568.1 Protein Homology CDS 3171867 3172097 . + 0 ID=cds3202;Parent=gene3247;Dbxref=Genbank:WP_025246089.1;Name=WP_025246089.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246089.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3171990 3172823 . + . ID=id469;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3172084 3172900 . + . ID=gene3248;Name=SOPEG_RS15965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15965;pseudo=true NZ_CP006568.1 Protein Homology CDS 3172084 3172900 . + 0 ID=cds3203;Parent=gene3248;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3172829 3173830 . + . ID=id470;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3173107 3174018 . + . ID=gene3249;Name=SOPEG_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15970;old_locus_tag=SOPEG_2958 NZ_CP006568.1 Protein Homology CDS 3173107 3174018 . + 0 ID=cds3204;Parent=gene3249;Dbxref=Genbank:WP_025246090.1;Name=WP_025246090.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246090.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3174073 3174582 . + . ID=gene3250;Name=SOPEG_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15975;old_locus_tag=SOPEG_2959 NZ_CP006568.1 Protein Homology CDS 3174073 3174582 . + 0 ID=cds3205;Parent=gene3250;Dbxref=Genbank:WP_051419816.1;Name=WP_051419816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419816.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3174638 3176627 . + . ID=gene3251;Name=SOPEG_RS15980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15980;pseudo=true NZ_CP006568.1 Protein Homology CDS 3174638 3176627 . + 0 ID=cds3206;Parent=gene3251;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3176630 3176818 . + . ID=gene3252;Name=SOPEG_RS15985;end_range=3176818,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS15985;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3176630 3176818 . + 0 ID=cds3207;Parent=gene3252;end_range=3176818,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=acetyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3176808 3178135 . + . ID=id471;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3176889 3178097 . + . ID=gene3253;Name=SOPEG_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15990;old_locus_tag=SOPEG_2962 NZ_CP006568.1 Protein Homology CDS 3176889 3178097 . + 0 ID=cds3208;Parent=gene3253;Dbxref=Genbank:WP_025246092.1;Name=WP_025246092.1;gbkey=CDS;product=transposase;protein_id=WP_025246092.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3178108 3178560 . - . ID=gene3254;Name=SOPEG_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS15995 NZ_CP006568.1 Protein Homology CDS 3178108 3178560 . - 0 ID=cds3209;Parent=gene3254;Dbxref=Genbank:WP_051419817.1;Name=WP_051419817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419817.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3178593 3179654 . + . ID=id472;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3178652 3179575 . - . ID=gene3255;Name=SOPEG_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16000;old_locus_tag=SOPEG_2964 NZ_CP006568.1 Protein Homology CDS 3178652 3179575 . - 0 ID=cds3210;Parent=gene3255;Dbxref=Genbank:WP_038468918.1;Name=WP_038468918.1;gbkey=CDS;product=transposase;protein_id=WP_038468918.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3179652 3180533 . - . ID=gene3256;Name=SOPEG_RS16005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16005;partial=true;pseudo=true;start_range=.,3179652 NZ_CP006568.1 Protein Homology CDS 3179652 3180533 . - 0 ID=cds3211;Parent=gene3256;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,3179652;transl_table=11 NZ_CP006568.1 RefSeq gene 3180530 3180871 . - . ID=gene3257;Name=SOPEG_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16010;old_locus_tag=SOPEG_2965 NZ_CP006568.1 Protein Homology CDS 3180530 3180871 . - 0 ID=cds3212;Parent=gene3257;Dbxref=Genbank:WP_025246094.1;Name=WP_025246094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246094.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3180950 3183424 . - . ID=gene3258;Name=SOPEG_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16015;old_locus_tag=SOPEG_2966 NZ_CP006568.1 Protein Homology CDS 3180950 3183424 . - 0 ID=cds3213;Parent=gene3258;Dbxref=Genbank:WP_025246095.1;Name=WP_025246095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246095.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3183450 3184373 . - . ID=gene3259;Name=SOPEG_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23205 NZ_CP006568.1 Protein Homology CDS 3183450 3184373 . - 0 ID=cds3214;Parent=gene3259;Dbxref=Genbank:WP_051419820.1;Name=WP_051419820.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419820.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3184899 3187430 . - . ID=gene3260;Name=SOPEG_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16025;old_locus_tag=SOPEG_2968 NZ_CP006568.1 Protein Homology CDS 3184899 3187430 . - 0 ID=cds3215;Parent=gene3260;Dbxref=Genbank:WP_025246097.1;Name=WP_025246097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246097.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3187430 3187942 . - . ID=gene3261;Name=SOPEG_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16030;old_locus_tag=SOPEG_2969 NZ_CP006568.1 Protein Homology CDS 3187430 3187942 . - 0 ID=cds3216;Parent=gene3261;Dbxref=Genbank:WP_025246098.1;Name=WP_025246098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246098.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3187944 3188219 . - . ID=gene3262;Name=SOPEG_RS16035;end_range=3188219,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16035;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3187944 3188219 . - 0 ID=cds3217;Parent=gene3262;end_range=3188219,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=acetyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3188210 3189535 . + . ID=id473;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3188439 3189458 . - . ID=gene3263;Name=SOPEG_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16040 NZ_CP006568.1 Protein Homology CDS 3188439 3189458 . - 0 ID=cds3218;Parent=gene3263;Dbxref=Genbank:WP_038468923.1;Name=WP_038468923.1;gbkey=CDS;product=transposase;protein_id=WP_038468923.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3189834 3190028 . - . ID=gene3264;Name=SOPEG_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16045 NZ_CP006568.1 GeneMarkS+ CDS 3189834 3190028 . - 0 ID=cds3219;Parent=gene3264;Dbxref=Genbank:WP_038468926.1;Name=WP_038468926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3190182 3191132 . + . ID=gene3265;Name=SOPEG_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16050;old_locus_tag=SOPEG_2972 NZ_CP006568.1 Protein Homology CDS 3190182 3191132 . + 0 ID=cds3220;Parent=gene3265;Dbxref=Genbank:WP_025246100.1;Name=WP_025246100.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_025246100.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3191541 3191798 . + . ID=gene3266;Name=SOPEG_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16055;old_locus_tag=SOPEG_2973 NZ_CP006568.1 Protein Homology CDS 3191541 3191798 . + 0 ID=cds3221;Parent=gene3266;Dbxref=Genbank:WP_011411525.1;Name=WP_011411525.1;gbkey=CDS;product=phosphocarrier protein HPr;protein_id=WP_011411525.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3191849 3193576 . + . ID=gene3267;Name=SOPEG_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16060;old_locus_tag=SOPEG_2974 NZ_CP006568.1 Protein Homology CDS 3191849 3193576 . + 0 ID=cds3222;Parent=gene3267;Dbxref=Genbank:WP_025246101.1;Name=WP_025246101.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_025246101.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3193618 3194127 . + . ID=gene3268;Name=SOPEG_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16065;old_locus_tag=SOPEG_2975 NZ_CP006568.1 Protein Homology CDS 3193618 3194127 . + 0 ID=cds3223;Parent=gene3268;Dbxref=Genbank:WP_025246102.1;Name=WP_025246102.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_025246102.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3194242 3194478 . - . ID=gene3269;Name=SOPEG_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16070 NZ_CP006568.1 Protein Homology CDS 3194242 3194478 . - 0 ID=cds3224;Parent=gene3269;Dbxref=Genbank:WP_025246103.1;Name=WP_025246103.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246103.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3194461 3197018 . + . ID=id474;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3194618 3196134 . + . ID=gene3270;Name=SOPEG_RS23210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23210;old_locus_tag=SOPEG_ps2977;pseudo=true NZ_CP006568.1 Protein Homology CDS 3194618 3196134 . + 0 ID=cds3225;Parent=gene3270;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:3195706..3195708%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3196146 3196895 . + . ID=gene3271;Name=SOPEG_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16080;old_locus_tag=SOPEG_2978 NZ_CP006568.1 Protein Homology CDS 3196146 3196895 . + 0 ID=cds3226;Parent=gene3271;Dbxref=Genbank:WP_025246104.1;Name=WP_025246104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246104.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3196933 3198207 . - . ID=gene3272;Name=SOPEG_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16085 NZ_CP006568.1 Protein Homology CDS 3196933 3198207 . - 0 ID=cds3227;Parent=gene3272;Dbxref=Genbank:WP_051419822.1;Name=WP_051419822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419822.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3198225 3198905 . - . ID=gene3273;Name=SOPEG_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16090;old_locus_tag=SOPEG_2979 NZ_CP006568.1 Protein Homology CDS 3198225 3198905 . - 0 ID=cds3228;Parent=gene3273;Dbxref=Genbank:WP_038470328.1;Name=WP_038470328.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_038470328.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3199067 3199908 . - . ID=gene3274;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=pseudogene;locus_tag=SOPEG_RS16095;pseudo=true NZ_CP006568.1 Protein Homology CDS 3199067 3199908 . - 0 ID=cds3229;Parent=gene3274;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=cysM;product=cysteine synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3199902 3200964 . - . ID=gene3275;Name=SOPEG_RS16100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16100;pseudo=true NZ_CP006568.1 Protein Homology CDS 3199902 3200964 . - 0 ID=cds3230;Parent=gene3275;exception=annotated by transcript or proteomic data;gbkey=CDS;product=NADH:flavin oxidoreductase;pseudo=true;transl_except=(pos:complement(3200427..3200429)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3201228 3202319 . - . ID=gene3276;Name=SOPEG_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16105;old_locus_tag=SOPEG_2982 NZ_CP006568.1 Protein Homology CDS 3201228 3202319 . - 0 ID=cds3231;Parent=gene3276;Dbxref=Genbank:WP_025246107.1;Name=WP_025246107.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_025246107.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3202340 3203185 . - . ID=gene3277;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=SOPEG_RS16110;old_locus_tag=SOPEG_2983 NZ_CP006568.1 Protein Homology CDS 3202340 3203185 . - 0 ID=cds3232;Parent=gene3277;Dbxref=Genbank:WP_038468931.1;Name=WP_038468931.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_038468931.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3203185 3204018 . - . ID=gene3278;Name=SOPEG_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16115;old_locus_tag=SOPEG_2984 NZ_CP006568.1 Protein Homology CDS 3203185 3204018 . - 0 ID=cds3233;Parent=gene3278;Dbxref=Genbank:WP_025246108.1;Name=WP_025246108.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_025246108.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3204018 3205043 . - . ID=gene3279;Name=SOPEG_RS16120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16120;pseudo=true NZ_CP006568.1 Protein Homology CDS 3204018 3205043 . - 0 ID=cds3234;Parent=gene3279;exception=annotated by transcript or proteomic data;gbkey=CDS;product=thiosulfate transporter subunit;pseudo=true;transl_except=(pos:complement(3204694..3204696)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3205941 3206366 . - . ID=gene3280;Name=SOPEG_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16130;old_locus_tag=SOPEG_2987 NZ_CP006568.1 Protein Homology CDS 3205941 3206366 . - 0 ID=cds3235;Parent=gene3280;Dbxref=Genbank:WP_025246110.1;Name=WP_025246110.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_025246110.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3206632 3207543 . + . ID=gene3281;Name=SOPEG_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16135;old_locus_tag=SOPEG_2988 NZ_CP006568.1 Protein Homology CDS 3206632 3207543 . + 0 ID=cds3236;Parent=gene3281;Dbxref=Genbank:WP_025246111.1;Name=WP_025246111.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_025246111.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3207548 3207991 . + . ID=gene3282;Name=SOPEG_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16140;old_locus_tag=SOPEG_2989 NZ_CP006568.1 Protein Homology CDS 3207548 3207991 . + 0 ID=cds3237;Parent=gene3282;Dbxref=Genbank:WP_025246112.1;Name=WP_025246112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246112.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3208224 3209174 . + . ID=gene3283;Name=SOPEG_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16145;old_locus_tag=SOPEG_2990 NZ_CP006568.1 Protein Homology CDS 3208224 3209174 . + 0 ID=cds3238;Parent=gene3283;Dbxref=Genbank:WP_025246113.1;Name=WP_025246113.1;gbkey=CDS;product=transaldolase;protein_id=WP_025246113.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3209190 3211187 . + . ID=gene3284;Name=SOPEG_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16150;old_locus_tag=SOPEG_2991 NZ_CP006568.1 Protein Homology CDS 3209190 3211187 . + 0 ID=cds3239;Parent=gene3284;Dbxref=Genbank:WP_025246114.1;Name=WP_025246114.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_025246114.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3211171 3212489 . + . ID=id475;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3211248 3211757 . + . ID=gene3285;Name=SOPEG_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16155 NZ_CP006568.1 Protein Homology CDS 3211248 3211757 . + 0 ID=cds3240;Parent=gene3285;Dbxref=Genbank:WP_025246115.1;Name=WP_025246115.1;gbkey=CDS;product=transposase;protein_id=WP_025246115.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3212115 3212456 . + . ID=gene3286;Name=SOPEG_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16160 NZ_CP006568.1 Protein Homology CDS 3212115 3212456 . + 0 ID=cds3241;Parent=gene3286;Dbxref=Genbank:WP_025246117.1;Name=WP_025246117.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246117.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3212806 3213645 . - . ID=gene3287;Name=SOPEG_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16165 NZ_CP006568.1 Protein Homology CDS 3212806 3213645 . - 0 ID=cds3242;Parent=gene3287;Dbxref=Genbank:WP_025246118.1;Name=WP_025246118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246118.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3214680 3215746 . + . ID=id476;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3214762 3215685 . + . ID=gene3288;Name=SOPEG_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16170;old_locus_tag=SOPEG_2994 NZ_CP006568.1 Protein Homology CDS 3214762 3215685 . + 0 ID=cds3243;Parent=gene3288;Dbxref=Genbank:WP_025246119.1;Name=WP_025246119.1;gbkey=CDS;product=transposase;protein_id=WP_025246119.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3216872 3217444 . + . ID=gene3289;Name=SOPEG_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16175 NZ_CP006568.1 Protein Homology CDS 3216872 3217444 . + 0 ID=cds3244;Parent=gene3289;Dbxref=Genbank:WP_025246120.1;Name=WP_025246120.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246120.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3217477 3217890 . + . ID=gene3290;Name=SOPEG_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16180 NZ_CP006568.1 GeneMarkS+ CDS 3217477 3217890 . + 0 ID=cds3245;Parent=gene3290;Dbxref=Genbank:WP_025246121.1;Name=WP_025246121.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246121.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3217998 3218261 . - . ID=gene3291;Name=SOPEG_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16185 NZ_CP006568.1 GeneMarkS+ CDS 3217998 3218261 . - 0 ID=cds3246;Parent=gene3291;Dbxref=Genbank:WP_038468935.1;Name=WP_038468935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3218269 3219579 . + . ID=gene3292;Name=SOPEG_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16190 NZ_CP006568.1 GeneMarkS+ CDS 3218269 3219579 . + 0 ID=cds3247;Parent=gene3292;Dbxref=Genbank:WP_038468939.1;Name=WP_038468939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3219554 3219838 . + . ID=gene3293;Name=SOPEG_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16195 NZ_CP006568.1 GeneMarkS+ CDS 3219554 3219838 . + 0 ID=cds3248;Parent=gene3293;Dbxref=Genbank:WP_025246123.1;Name=WP_025246123.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246123.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3220070 3221560 . + . ID=gene3294;Name=SOPEG_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16200 NZ_CP006568.1 Protein Homology CDS 3220070 3221560 . + 0 ID=cds3249;Parent=gene3294;Dbxref=Genbank:WP_038468942.1;Name=WP_038468942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468942.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3221550 3221765 . + . ID=gene3295;Name=SOPEG_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16205 NZ_CP006568.1 GeneMarkS+ CDS 3221550 3221765 . + 0 ID=cds3250;Parent=gene3295;Dbxref=Genbank:WP_025246125.1;Name=WP_025246125.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246125.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3221762 3222235 . + . ID=gene3296;Name=SOPEG_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16210 NZ_CP006568.1 Protein Homology CDS 3221762 3222235 . + 0 ID=cds3251;Parent=gene3296;Dbxref=Genbank:WP_025246126.1;Name=WP_025246126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246126.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3222621 3222806 . + . ID=gene3297;Name=SOPEG_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16215 NZ_CP006568.1 GeneMarkS+ CDS 3222621 3222806 . + 0 ID=cds3252;Parent=gene3297;Dbxref=Genbank:WP_038468947.1;Name=WP_038468947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468947.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3222842 3225221 . + . ID=id477;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3222917 3223843 . + . ID=gene3298;Name=SOPEG_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16220 NZ_CP006568.1 Protein Homology CDS 3222917 3223843 . + 0 ID=cds3253;Parent=gene3298;Dbxref=Genbank:WP_025246127.1;Name=WP_025246127.1;gbkey=CDS;product=transposase;protein_id=WP_025246127.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3223834 3225042 . - . ID=gene3299;Name=SOPEG_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16225;old_locus_tag=SOPEG_3000 NZ_CP006568.1 Protein Homology CDS 3223834 3225042 . - 0 ID=cds3254;Parent=gene3299;Dbxref=Genbank:WP_025246128.1;Name=WP_025246128.1;gbkey=CDS;product=transposase;protein_id=WP_025246128.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3225218 3225604 . - . ID=gene3300;Name=SOPEG_RS16230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16230;partial=true;pseudo=true;start_range=.,3225218 NZ_CP006568.1 Protein Homology CDS 3225218 3225604 . - 0 ID=cds3255;Parent=gene3300;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=GDP-mannose pyrophosphatase;pseudo=true;start_range=.,3225218;transl_table=11 NZ_CP006568.1 RefSeq gene 3225819 3226996 . + . ID=gene3301;Name=SOPEG_RS16235;end_range=3226996,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16235;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3225819 3226996 . + 0 ID=cds3256;Parent=gene3301;end_range=3226996,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=multidrug transporter;pseudo=true;transl_except=(pos:3226697..3226699%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3226995 3228056 . + . ID=id478;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3227054 3227977 . - . ID=gene3302;Name=SOPEG_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16240;old_locus_tag=SOPEG_3003 NZ_CP006568.1 Protein Homology CDS 3227054 3227977 . - 0 ID=cds3257;Parent=gene3302;Dbxref=Genbank:WP_025244443.1;Name=WP_025244443.1;gbkey=CDS;product=transposase;protein_id=WP_025244443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3228054 3230051 . + . ID=gene3303;Name=SOPEG_RS16245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16245;partial=true;pseudo=true;start_range=.,3228054 NZ_CP006568.1 Protein Homology CDS 3228054 3230051 . + 0 ID=cds3258;Parent=gene3303;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=multidrug transporter;pseudo=true;start_range=.,3228054;transl_table=11 NZ_CP006568.1 RefSeq gene 3231470 3231853 . + . ID=gene3304;Name=SOPEG_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16250;old_locus_tag=SOPEG_3004 NZ_CP006568.1 Protein Homology CDS 3231470 3231853 . + 0 ID=cds3259;Parent=gene3304;Dbxref=Genbank:WP_025246134.1;Name=WP_025246134.1;gbkey=CDS;product=ArsC family transcriptional regulator;protein_id=WP_025246134.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3231855 3232982 . + . ID=gene3305;Name=SOPEG_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16255;old_locus_tag=SOPEG_3005 NZ_CP006568.1 Protein Homology CDS 3231855 3232982 . + 0 ID=cds3260;Parent=gene3305;Dbxref=Genbank:WP_025246135.1;Name=WP_025246135.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_025246135.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3232979 3233581 . + . ID=gene3306;Name=SOPEG_RS16260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16260;pseudo=true NZ_CP006568.1 Protein Homology CDS 3232979 3233581 . + 0 ID=cds3261;Parent=gene3306;gbkey=CDS;product=peptidase M15;pseudo=true;transl_except=(pos:3233162..3233164%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3233629 3237545 . + . ID=id479;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3233858 3234920 . - . ID=gene3307;Name=SOPEG_RS16265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16265;partial=true;pseudo=true;start_range=.,3233858 NZ_CP006568.1 Protein Homology CDS 3233858 3234920 . - 0 ID=cds3262;Parent=gene3307;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3233858;transl_table=11 NZ_CP006568.1 RefSeq gene 3235062 3235811 . - . ID=gene3308;Name=SOPEG_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16270;old_locus_tag=SOPEG_3008 NZ_CP006568.1 Protein Homology CDS 3235062 3235811 . - 0 ID=cds3263;Parent=gene3308;Dbxref=Genbank:WP_025246136.1;Name=WP_025246136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246136.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3235823 3237340 . - . ID=gene3309;Name=SOPEG_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16275;old_locus_tag=SOPEG_3009 NZ_CP006568.1 Protein Homology CDS 3235823 3237340 . - 0 ID=cds3264;Parent=gene3309;Dbxref=Genbank:WP_025246137.1;Name=WP_025246137.1;gbkey=CDS;product=transposase;protein_id=WP_025246137.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3237708 3239567 . - . ID=gene3310;Name=SOPEG_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16280 NZ_CP006568.1 Protein Homology CDS 3237708 3239567 . - 0 ID=cds3265;Parent=gene3310;Dbxref=Genbank:WP_051419824.1;Name=WP_051419824.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419824.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3239569 3240021 . - . ID=gene3311;Name=SOPEG_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16285;old_locus_tag=SOPEG_3012 NZ_CP006568.1 Protein Homology CDS 3239569 3240021 . - 0 ID=cds3266;Parent=gene3311;Dbxref=Genbank:WP_025246139.1;Name=WP_025246139.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246139.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3240043 3240881 . - . ID=gene3312;Name=SOPEG_RS16290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16290;pseudo=true NZ_CP006568.1 Protein Homology CDS 3240043 3240881 . - 0 ID=cds3267;Parent=gene3312;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3240241..3240243)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3240981 3241694 . - . ID=gene3313;Name=SOPEG_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16295;old_locus_tag=SOPEG_3014 NZ_CP006568.1 Protein Homology CDS 3240981 3241694 . - 0 ID=cds3268;Parent=gene3313;Dbxref=Genbank:WP_025246140.1;Name=WP_025246140.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_025246140.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3241763 3242812 . - . ID=gene3314;Name=SOPEG_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16300;old_locus_tag=SOPEG_3015 NZ_CP006568.1 Protein Homology CDS 3241763 3242812 . - 0 ID=cds3269;Parent=gene3314;Dbxref=Genbank:WP_025246141.1;Name=WP_025246141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246141.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3242829 3243707 . - . ID=gene3315;Name=SOPEG_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16305;old_locus_tag=SOPEG_3016 NZ_CP006568.1 Protein Homology CDS 3242829 3243707 . - 0 ID=cds3270;Parent=gene3315;Dbxref=Genbank:WP_025246142.1;Name=WP_025246142.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_025246142.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3243853 3244428 . + . ID=gene3316;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=SOPEG_RS16310;old_locus_tag=SOPEG_3017 NZ_CP006568.1 Protein Homology CDS 3243853 3244428 . + 0 ID=cds3271;Parent=gene3316;Dbxref=Genbank:WP_025246143.1;Name=WP_025246143.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_025246143.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3244425 3244892 . + . ID=gene3317;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=SOPEG_RS16315;old_locus_tag=SOPEG_3018 NZ_CP006568.1 Protein Homology CDS 3244425 3244892 . + 0 ID=cds3272;Parent=gene3317;Dbxref=Genbank:WP_025246144.1;Name=WP_025246144.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_025246144.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3244986 3246464 . + . ID=gene3318;Name=SOPEG_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16320;old_locus_tag=SOPEG_3019 NZ_CP006568.1 Protein Homology CDS 3244986 3246464 . + 0 ID=cds3273;Parent=gene3318;Dbxref=Genbank:WP_025246145.1;Name=WP_025246145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246145.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3246551 3247252 . - . ID=gene3319;Name=SOPEG_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16325;old_locus_tag=SOPEG_3020 NZ_CP006568.1 Protein Homology CDS 3246551 3247252 . - 0 ID=cds3274;Parent=gene3319;Dbxref=Genbank:WP_025246146.1;Name=WP_025246146.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_025246146.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3247329 3248612 . - . ID=gene3320;Name=SOPEG_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16330;old_locus_tag=SOPEG_3021 NZ_CP006568.1 Protein Homology CDS 3247329 3248612 . - 0 ID=cds3275;Parent=gene3320;Dbxref=Genbank:WP_025246147.1;Name=WP_025246147.1;gbkey=CDS;product=uracil transporter;protein_id=WP_025246147.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3248669 3249295 . - . ID=gene3321;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SOPEG_RS16335;old_locus_tag=SOPEG_3022 NZ_CP006568.1 Protein Homology CDS 3248669 3249295 . - 0 ID=cds3276;Parent=gene3321;Dbxref=Genbank:WP_025246148.1;Name=WP_025246148.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_025246148.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3249294 3249530 . + . ID=gene3322;Name=SOPEG_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16340 NZ_CP006568.1 GeneMarkS+ CDS 3249294 3249530 . + 0 ID=cds3277;Parent=gene3322;Dbxref=Genbank:WP_038468952.1;Name=WP_038468952.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468952.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3249527 3250564 . + . ID=gene3323;Name=SOPEG_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16345;old_locus_tag=SOPEG_3023 NZ_CP006568.1 Protein Homology CDS 3249527 3250564 . + 0 ID=cds3278;Parent=gene3323;Dbxref=Genbank:WP_025246149.1;Name=WP_025246149.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_025246149.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3250564 3251202 . + . ID=gene3324;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SOPEG_RS16350;old_locus_tag=SOPEG_3024 NZ_CP006568.1 Protein Homology CDS 3250564 3251202 . + 0 ID=cds3279;Parent=gene3324;Dbxref=Genbank:WP_025246150.1;Name=WP_025246150.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_025246150.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3251199 3251435 . - . ID=gene3325;Name=SOPEG_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16355 NZ_CP006568.1 GeneMarkS+ CDS 3251199 3251435 . - 0 ID=cds3280;Parent=gene3325;Dbxref=Genbank:WP_025246151.1;Name=WP_025246151.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246151.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3251471 3252286 . - . ID=gene3326;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=SOPEG_RS16360;old_locus_tag=SOPEG_3025 NZ_CP006568.1 Protein Homology CDS 3251471 3252286 . - 0 ID=cds3281;Parent=gene3326;Dbxref=Genbank:WP_051419826.1;Name=WP_051419826.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate ABC transporter ATP-binding protein;protein_id=WP_051419826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3252303 3253768 . - . ID=gene3327;Name=SOPEG_RS16365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16365;pseudo=true NZ_CP006568.1 Protein Homology CDS 3252303 3253768 . - 0 ID=cds3282;Parent=gene3327;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3253765 3254328 . - . ID=gene3328;Name=SOPEG_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23215 NZ_CP006568.1 Protein Homology CDS 3253765 3254328 . - 0 ID=cds3283;Parent=gene3328;Dbxref=Genbank:WP_051419828.1;Name=WP_051419828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419828.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3254364 3255137 . - . ID=gene3329;Name=SOPEG_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23220 NZ_CP006568.1 Protein Homology CDS 3254364 3255137 . - 0 ID=cds3284;Parent=gene3329;Dbxref=Genbank:WP_025246154.1;Name=WP_025246154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246154.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3255134 3255538 . - . ID=gene3330;Name=SOPEG_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16375 NZ_CP006568.1 GeneMarkS+ CDS 3255134 3255538 . - 0 ID=cds3285;Parent=gene3330;Dbxref=Genbank:WP_025246155.1;Name=WP_025246155.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246155.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3255673 3256059 . - . ID=gene3331;Name=SOPEG_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16380 NZ_CP006568.1 GeneMarkS+ CDS 3255673 3256059 . - 0 ID=cds3286;Parent=gene3331;Dbxref=Genbank:WP_025246156.1;Name=WP_025246156.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246156.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3256244 3258313 . + . ID=gene3332;Name=SOPEG_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16385;old_locus_tag=SOPEG_3028 NZ_CP006568.1 Protein Homology CDS 3256244 3258313 . + 0 ID=cds3287;Parent=gene3332;Dbxref=Genbank:WP_025246157.1;Name=WP_025246157.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_025246157.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3258336 3259396 . + . ID=id480;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3258395 3259318 . - . ID=gene3333;Name=SOPEG_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16390;old_locus_tag=SOPEG_3030 NZ_CP006568.1 Protein Homology CDS 3258395 3259318 . - 0 ID=cds3288;Parent=gene3333;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3259381 3260931 . + . ID=gene3334;Name=SOPEG_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16395 NZ_CP006568.1 Protein Homology CDS 3259381 3260931 . + 0 ID=cds3289;Parent=gene3334;Dbxref=Genbank:WP_038470339.1;Name=WP_038470339.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_038470339.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3260928 3261263 . + . ID=gene3335;Name=SOPEG_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16400 NZ_CP006568.1 GeneMarkS+ CDS 3260928 3261263 . + 0 ID=cds3290;Parent=gene3335;Dbxref=Genbank:WP_025246159.1;Name=WP_025246159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246159.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3261260 3261451 . + . ID=gene3336;Name=SOPEG_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16405;old_locus_tag=SOPEG_3031 NZ_CP006568.1 Protein Homology CDS 3261260 3261451 . + 0 ID=cds3291;Parent=gene3336;Dbxref=Genbank:WP_025246160.1;Name=WP_025246160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3261578 3263021 . + . ID=gene3337;Name=SOPEG_RS16410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16410;pseudo=true NZ_CP006568.1 Protein Homology CDS 3261578 3263021 . + 0 ID=cds3292;Parent=gene3337;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dihydroorotate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3263094 3263840 . + . ID=gene3338;Name=SOPEG_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16415;old_locus_tag=SOPEG_3033 NZ_CP006568.1 Protein Homology CDS 3263094 3263840 . + 0 ID=cds3293;Parent=gene3338;Dbxref=Genbank:WP_025246161.1;Name=WP_025246161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246161.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3264012 3265358 . + . ID=gene3339;Name=SOPEG_RS16420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16420;pseudo=true NZ_CP006568.1 Protein Homology CDS 3264012 3265358 . + 0 ID=cds3294;Parent=gene3339;gbkey=CDS;product=chaperone;pseudo=true;transl_except=(pos:3264249..3264251%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3265475 3266092 . - . ID=gene3340;Name=SOPEG_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16425;old_locus_tag=SOPEG_3035 NZ_CP006568.1 Protein Homology CDS 3265475 3266092 . - 0 ID=cds3295;Parent=gene3340;Dbxref=Genbank:WP_025246162.1;Name=WP_025246162.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_025246162.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3266164 3266844 . - . ID=gene3341;Name=SOPEG_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16430;old_locus_tag=SOPEG_3036 NZ_CP006568.1 Protein Homology CDS 3266164 3266844 . - 0 ID=cds3296;Parent=gene3341;Dbxref=Genbank:WP_051419829.1;Name=WP_051419829.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_051419829.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3266822 3267298 . - . ID=gene3342;Name=SOPEG_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16435;old_locus_tag=SOPEG_3037 NZ_CP006568.1 Protein Homology CDS 3266822 3267298 . - 0 ID=cds3297;Parent=gene3342;Dbxref=Genbank:WP_025246164.1;Name=WP_025246164.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;product=urease accessory protein UreE;protein_id=WP_025246164.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3267316 3269020 . - . ID=gene3343;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=pseudogene;locus_tag=SOPEG_RS16440;pseudo=true NZ_CP006568.1 Protein Homology CDS 3267316 3269020 . - 0 ID=cds3298;Parent=gene3343;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ureC;product=urease subunit alpha;pseudo=true;transl_except=(pos:complement(3267430..3267432)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3269047 3269334 . - . ID=gene3344;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=SOPEG_RS16445 NZ_CP006568.1 Protein Homology CDS 3269047 3269334 . - 0 ID=cds3299;Parent=gene3344;Dbxref=Genbank:WP_038468957.1;Name=WP_038468957.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_038468957.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3269350 3269592 . - . ID=gene3345;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=SOPEG_RS16450 NZ_CP006568.1 Protein Homology CDS 3269350 3269592 . - 0 ID=cds3300;Parent=gene3345;Dbxref=Genbank:WP_025246165.1;Name=WP_025246165.1;Note=UreA%2C with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide%3B nickel metalloenzyme%3B accessory proteins UreD%2C UreE%2C UreF%2C and UreG are necessary for assembly of the metallocenter;gbkey=CDS;gene=ureA;product=urease subunit gamma;protein_id=WP_025246165.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3269603 3270419 . - . ID=gene3346;Name=SOPEG_RS16455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16455;pseudo=true NZ_CP006568.1 Protein Homology CDS 3269603 3270419 . - 0 ID=cds3301;Parent=gene3346;exception=annotated by transcript or proteomic data;gbkey=CDS;product=urease accessory protein UreD;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3270981 3271160 . + . ID=gene3347;Name=SOPEG_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16460;old_locus_tag=SOPEG_3042 NZ_CP006568.1 Protein Homology CDS 3270981 3271160 . + 0 ID=cds3302;Parent=gene3347;Dbxref=Genbank:WP_025246166.1;Name=WP_025246166.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246166.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3271157 3272112 . - . ID=gene3348;Name=SOPEG_RS16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16465;pseudo=true NZ_CP006568.1 Protein Homology CDS 3271157 3272112 . - 0 ID=cds3303;Parent=gene3348;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alcohol dehydrogenase;pseudo=true;transl_except=(pos:complement(3271527..3271529)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3274057 3275421 . + . ID=gene3349;Name=SOPEG_RS16470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16470;pseudo=true NZ_CP006568.1 Protein Homology CDS 3274057 3275421 . + 0 ID=cds3304;Parent=gene3349;gbkey=CDS;product=histidine kinase;pseudo=true;transl_except=(pos:3274225..3274227%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3275414 3276121 . + . ID=gene3350;Name=SOPEG_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16475;old_locus_tag=SOPEG_3046 NZ_CP006568.1 Protein Homology CDS 3275414 3276121 . + 0 ID=cds3305;Parent=gene3350;Dbxref=Genbank:WP_025246170.1;Name=WP_025246170.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_025246170.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3276261 3276602 . - . ID=gene3351;Name=SOPEG_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16480 NZ_CP006568.1 GeneMarkS+ CDS 3276261 3276602 . - 0 ID=cds3306;Parent=gene3351;Dbxref=Genbank:WP_025246171.1;Name=WP_025246171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246171.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3276728 3277207 . + . ID=gene3352;Name=SOPEG_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16485 NZ_CP006568.1 Protein Homology CDS 3276728 3277207 . + 0 ID=cds3307;Parent=gene3352;Dbxref=Genbank:WP_025246172.1;Name=WP_025246172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246172.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3277194 3278255 . + . ID=id481;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3277253 3278176 . - . ID=gene3353;Name=SOPEG_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16490;old_locus_tag=SOPEG_3048 NZ_CP006568.1 Protein Homology CDS 3277253 3278176 . - 0 ID=cds3308;Parent=gene3353;Dbxref=Genbank:WP_025246173.1;Name=WP_025246173.1;gbkey=CDS;product=transposase;protein_id=WP_025246173.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3278194 3279168 . + . ID=gene3354;Name=SOPEG_RS16495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16495;partial=true;pseudo=true;start_range=.,3278194 NZ_CP006568.1 Protein Homology CDS 3278194 3279168 . + 0 ID=cds3309;Parent=gene3354;gbkey=CDS;partial=true;product=protease;pseudo=true;start_range=.,3278194;transl_except=(pos:3278653..3278655%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3279499 3280350 . + . ID=gene3355;Name=SOPEG_RS16500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16500;pseudo=true NZ_CP006568.1 Protein Homology CDS 3279499 3280350 . + 0 ID=cds3310;Parent=gene3355;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;pseudo=true;transl_except=(pos:3280114..3280116%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3280488 3281306 . + . ID=gene3356;Name=SOPEG_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16505 NZ_CP006568.1 Protein Homology CDS 3280488 3281306 . + 0 ID=cds3311;Parent=gene3356;Dbxref=Genbank:WP_025246176.1;Name=WP_025246176.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246176.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3281174 3282484 . + . ID=id482;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3282028 3282409 . - . ID=gene3357;Name=SOPEG_RS16510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16510;partial=true;pseudo=true;start_range=.,3282028 NZ_CP006568.1 Protein Homology CDS 3282028 3282409 . - 0 ID=cds3312;Parent=gene3357;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3282028;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3282514 3285117 . + . ID=id483;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3282637 3283386 . - . ID=gene3358;Name=SOPEG_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16515;old_locus_tag=SOPEG_3052 NZ_CP006568.1 Protein Homology CDS 3282637 3283386 . - 0 ID=cds3313;Parent=gene3358;Dbxref=Genbank:WP_025244354.1;Name=WP_025244354.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244354.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3283398 3284915 . - . ID=gene3359;Name=SOPEG_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16520;old_locus_tag=SOPEG_3053 NZ_CP006568.1 Protein Homology CDS 3283398 3284915 . - 0 ID=cds3314;Parent=gene3359;Dbxref=Genbank:WP_025246177.1;Name=WP_025246177.1;gbkey=CDS;product=transposase;protein_id=WP_025246177.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3285042 3285242 . - . ID=gene3360;Name=SOPEG_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16525 NZ_CP006568.1 GeneMarkS+ CDS 3285042 3285242 . - 0 ID=cds3315;Parent=gene3360;Dbxref=Genbank:WP_025246178.1;Name=WP_025246178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246178.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3285282 3286085 . - . ID=gene3361;Name=SOPEG_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16530;old_locus_tag=SOPEG_3054 NZ_CP006568.1 Protein Homology CDS 3285282 3286085 . - 0 ID=cds3316;Parent=gene3361;Dbxref=Genbank:WP_025246179.1;Name=WP_025246179.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=hydroxymethylpyrimidine kinase;protein_id=WP_025246179.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3286082 3286879 . - . ID=gene3362;Name=SOPEG_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16535;old_locus_tag=SOPEG_3055 NZ_CP006568.1 Protein Homology CDS 3286082 3286879 . - 0 ID=cds3317;Parent=gene3362;Dbxref=Genbank:WP_025246180.1;Name=WP_025246180.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_025246180.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3287458 3288180 . - . ID=gene3363;Name=SOPEG_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16540;old_locus_tag=SOPEG_3056 NZ_CP006568.1 Protein Homology CDS 3287458 3288180 . - 0 ID=cds3318;Parent=gene3363;Dbxref=Genbank:WP_051419831.1;Name=WP_051419831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419831.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3288476 3288940 . + . ID=gene3364;Name=SOPEG_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16545;old_locus_tag=SOPEG_3057 NZ_CP006568.1 Protein Homology CDS 3288476 3288940 . + 0 ID=cds3319;Parent=gene3364;Dbxref=Genbank:WP_025246182.1;Name=WP_025246182.1;gbkey=CDS;product=GCN5 family acetyltransferase;protein_id=WP_025246182.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3289007 3289231 . - . ID=gene3365;Name=SOPEG_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16550;old_locus_tag=SOPEG_3058 NZ_CP006568.1 Protein Homology CDS 3289007 3289231 . - 0 ID=cds3320;Parent=gene3365;Dbxref=Genbank:WP_025246183.1;Name=WP_025246183.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_025246183.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3289253 3290254 . - . ID=gene3366;Name=SOPEG_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16555 NZ_CP006568.1 Protein Homology CDS 3289253 3290254 . - 0 ID=cds3321;Parent=gene3366;Dbxref=Genbank:WP_051420010.1;Name=WP_051420010.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420010.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3290453 3291361 . - . ID=gene3367;Name=SOPEG_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16560;old_locus_tag=SOPEG_3060 NZ_CP006568.1 Protein Homology CDS 3290453 3291361 . - 0 ID=cds3322;Parent=gene3367;Dbxref=Genbank:WP_025246185.1;Name=WP_025246185.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_025246185.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3291457 3292594 . + . ID=gene3368;Name=SOPEG_RS16565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16565;old_locus_tag=SOPEG_3061;pseudo=true NZ_CP006568.1 Protein Homology CDS 3291457 3292594 . + 0 ID=cds3323;Parent=gene3368;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alanine racemase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3292890 3294239 . + . ID=gene3369;Name=SOPEG_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16570;old_locus_tag=SOPEG_3062 NZ_CP006568.1 Protein Homology CDS 3292890 3294239 . + 0 ID=cds3324;Parent=gene3369;Dbxref=Genbank:WP_025246186.1;Name=WP_025246186.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246186.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3294269 3295468 . + . ID=gene3370;Name=SOPEG_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16575;old_locus_tag=SOPEG_3063 NZ_CP006568.1 Protein Homology CDS 3294269 3295468 . + 0 ID=cds3325;Parent=gene3370;Dbxref=Genbank:WP_025246187.1;Name=WP_025246187.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_025246187.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3295563 3295994 . + . ID=gene3371;Name=SOPEG_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16580;old_locus_tag=SOPEG_3064 NZ_CP006568.1 Protein Homology CDS 3295563 3295994 . + 0 ID=cds3326;Parent=gene3371;Dbxref=Genbank:WP_025246188.1;Name=WP_025246188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246188.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3296025 3296777 . + . ID=gene3372;Name=SOPEG_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16585;old_locus_tag=SOPEG_3065 NZ_CP006568.1 Protein Homology CDS 3296025 3296777 . + 0 ID=cds3327;Parent=gene3372;Dbxref=Genbank:WP_038468962.1;Name=WP_038468962.1;gbkey=CDS;product=membrane protein;protein_id=WP_038468962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3297110 3297385 . + . ID=gene3373;Name=SOPEG_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16590;old_locus_tag=SOPEG_3066 NZ_CP006568.1 Protein Homology CDS 3297110 3297385 . + 0 ID=cds3328;Parent=gene3373;Dbxref=Genbank:WP_025246190.1;Name=WP_025246190.1;gbkey=CDS;product=PTS galactitol transporter subunit IIB;protein_id=WP_025246190.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3297396 3298694 . + . ID=gene3374;Name=SOPEG_RS16595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16595;pseudo=true NZ_CP006568.1 Protein Homology CDS 3297396 3298694 . + 0 ID=cds3329;Parent=gene3374;gbkey=CDS;product=DNA mismatch repair protein MutT;pseudo=true;transl_except=(pos:3298173..3298175%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3298772 3299227 . + . ID=gene3375;Name=SOPEG_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16600;old_locus_tag=SOPEG_3068 NZ_CP006568.1 Protein Homology CDS 3298772 3299227 . + 0 ID=cds3330;Parent=gene3375;Dbxref=Genbank:WP_025246191.1;Name=WP_025246191.1;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_025246191.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3299277 3299594 . + . ID=gene3376;Name=SOPEG_RS16605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16605;pseudo=true NZ_CP006568.1 Protein Homology CDS 3299277 3299594 . + 0 ID=cds3331;Parent=gene3376;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3299472..3299474%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3299621 3300376 . - . ID=gene3377;Name=SOPEG_RS16610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16610;pseudo=true NZ_CP006568.1 Protein Homology CDS 3299621 3300376 . - 0 ID=cds3332;Parent=gene3377;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_except=(pos:complement(3300032..3300034)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3300609 3301217 . + . ID=gene3378;Name=SOPEG_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16615;old_locus_tag=SOPEG_3070 NZ_CP006568.1 Protein Homology CDS 3300609 3301217 . + 0 ID=cds3333;Parent=gene3378;Dbxref=Genbank:WP_025246192.1;Name=WP_025246192.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_025246192.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3301344 3302123 . - . ID=gene3379;Name=SOPEG_RS16620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16620;pseudo=true NZ_CP006568.1 Protein Homology CDS 3301344 3302123 . - 0 ID=cds3334;Parent=gene3379;exception=annotated by transcript or proteomic data;gbkey=CDS;product=short-chain dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3302364 3304192 . + . ID=id484;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3302404 3303015 . - . ID=gene3380;Name=SOPEG_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16625 NZ_CP006568.1 Protein Homology CDS 3302404 3303015 . - 0 ID=cds3335;Parent=gene3380;Dbxref=Genbank:WP_025246193.1;Name=WP_025246193.1;gbkey=CDS;product=transposase;protein_id=WP_025246193.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3303034 3303486 . - . ID=gene3381;Name=SOPEG_RS16630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16630;partial=true;pseudo=true;start_range=.,3303034 NZ_CP006568.1 Protein Homology CDS 3303034 3303486 . - 0 ID=cds3336;Parent=gene3381;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3303034;transl_table=11 NZ_CP006568.1 RefSeq gene 3303522 3303989 . - . ID=gene3382;Name=SOPEG_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23225;old_locus_tag=SOPEG_ps3073 NZ_CP006568.1 Protein Homology CDS 3303522 3303989 . - 0 ID=cds3337;Parent=gene3382;Dbxref=Genbank:WP_025246195.1;Name=WP_025246195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246195.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3304302 3304652 . + . ID=gene3383;Name=SOPEG_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16640;old_locus_tag=SOPEG_3074 NZ_CP006568.1 Protein Homology CDS 3304302 3304652 . + 0 ID=cds3338;Parent=gene3383;Dbxref=Genbank:WP_025246196.1;Name=WP_025246196.1;gbkey=CDS;product=HxlR family transcriptional regulator;protein_id=WP_025246196.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3305143 3305586 . - . ID=gene3384;Name=SOPEG_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16645;old_locus_tag=SOPEG_3075 NZ_CP006568.1 Protein Homology CDS 3305143 3305586 . - 0 ID=cds3339;Parent=gene3384;Dbxref=Genbank:WP_025246197.1;Name=WP_025246197.1;gbkey=CDS;product=cupin;protein_id=WP_025246197.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3305925 3306869 . - . ID=gene3385;Name=SOPEG_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16650;old_locus_tag=SOPEG_3076 NZ_CP006568.1 Protein Homology CDS 3305925 3306869 . - 0 ID=cds3340;Parent=gene3385;Dbxref=Genbank:WP_025246198.1;Name=WP_025246198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246198.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3306866 3307234 . - . ID=gene3386;Name=SOPEG_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23230 NZ_CP006568.1 Protein Homology CDS 3306866 3307234 . - 0 ID=cds3341;Parent=gene3386;Dbxref=Genbank:WP_051419833.1;Name=WP_051419833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419833.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3307383 3307676 . - . ID=gene3387;Name=SOPEG_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23235 NZ_CP006568.1 Protein Homology CDS 3307383 3307676 . - 0 ID=cds3342;Parent=gene3387;Dbxref=Genbank:WP_051419835.1;Name=WP_051419835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419835.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3308075 3309181 . - . ID=gene3388;Name=SOPEG_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16660 NZ_CP006568.1 Protein Homology CDS 3308075 3309181 . - 0 ID=cds3343;Parent=gene3388;Dbxref=Genbank:WP_051419837.1;Name=WP_051419837.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419837.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3309181 3309642 . - . ID=gene3389;Name=SOPEG_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23240 NZ_CP006568.1 Protein Homology CDS 3309181 3309642 . - 0 ID=cds3344;Parent=gene3389;Dbxref=Genbank:WP_051419839.1;Name=WP_051419839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419839.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3309841 3310647 . - . ID=gene3390;Name=SOPEG_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16665;old_locus_tag=SOPEG_3079 NZ_CP006568.1 Protein Homology CDS 3309841 3310647 . - 0 ID=cds3345;Parent=gene3390;Dbxref=Genbank:WP_025246199.1;Name=WP_025246199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246199.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3310925 3312502 . - . ID=gene3391;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS16670;old_locus_tag=SOPEG_3080 NZ_CP006568.1 Protein Homology CDS 3310925 3312502 . - 0 ID=cds3346;Parent=gene3391;Dbxref=Genbank:WP_025246200.1;Name=WP_025246200.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=WP_025246200.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3312617 3314080 . - . ID=gene3392;Name=SOPEG_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16675;old_locus_tag=SOPEG_3081 NZ_CP006568.1 Protein Homology CDS 3312617 3314080 . - 0 ID=cds3347;Parent=gene3392;Dbxref=Genbank:WP_038468968.1;Name=WP_038468968.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_038468968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3314249 3315625 . + . ID=gene3393;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SOPEG_RS16680;old_locus_tag=SOPEG_3082 NZ_CP006568.1 Protein Homology CDS 3314249 3315625 . + 0 ID=cds3348;Parent=gene3393;Dbxref=Genbank:WP_025246201.1;Name=WP_025246201.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=WP_025246201.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3315890 3317053 . - . ID=gene3394;Name=SOPEG_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16685;old_locus_tag=SOPEG_3083 NZ_CP006568.1 Protein Homology CDS 3315890 3317053 . - 0 ID=cds3349;Parent=gene3394;Dbxref=Genbank:WP_025246202.1;Name=WP_025246202.1;gbkey=CDS;product=MFS transporter;protein_id=WP_025246202.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3317141 3317632 . - . ID=gene3395;Name=SOPEG_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16690;old_locus_tag=SOPEG_3084 NZ_CP006568.1 Protein Homology CDS 3317141 3317632 . - 0 ID=cds3350;Parent=gene3395;Dbxref=Genbank:WP_025246203.1;Name=WP_025246203.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_025246203.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3318165 3319784 . + . ID=gene3396;Name=SOPEG_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16695;old_locus_tag=SOPEG_3085 NZ_CP006568.1 Protein Homology CDS 3318165 3319784 . + 0 ID=cds3351;Parent=gene3396;Dbxref=Genbank:WP_025246204.1;Name=WP_025246204.1;gbkey=CDS;product=malate:quinone oxidoreductase;protein_id=WP_025246204.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3319789 3320727 . + . ID=gene3397;Name=SOPEG_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16700 NZ_CP006568.1 Protein Homology CDS 3319789 3320727 . + 0 ID=cds3352;Parent=gene3397;Dbxref=Genbank:WP_051419841.1;Name=WP_051419841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419841.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3320739 3321818 . - . ID=gene3398;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=SOPEG_RS16705;old_locus_tag=SOPEG_3087 NZ_CP006568.1 Protein Homology CDS 3320739 3321818 . - 0 ID=cds3353;Parent=gene3398;Dbxref=Genbank:WP_025246205.1;Name=WP_025246205.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_025246205.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3322117 3324878 . + . ID=gene3399;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=pseudogene;locus_tag=SOPEG_RS16710;pseudo=true NZ_CP006568.1 Protein Homology CDS 3322117 3324878 . + 0 ID=cds3354;Parent=gene3399;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=lacZ;product=beta-D-galactosidase;pseudo=true;transl_except=(pos:3322590..3322592%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3324933 3325580 . + . ID=gene3400;Name=lacY;end_range=3325580,.;gbkey=Gene;gene=lacY;gene_biotype=pseudogene;locus_tag=SOPEG_RS16715;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3324933 3325580 . + 0 ID=cds3355;Parent=gene3400;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;end_range=3325580,.;gbkey=CDS;gene=lacY;partial=true;product=galactoside permease;pseudo=true;transl_except=(pos:3325044..3325046%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3325578 3326645 . + . ID=id485;gbkey=repeat_region;gene=lacY NZ_CP006568.1 RefSeq gene 3325660 3326583 . + . ID=gene3401;Name=SOPEG_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16720;old_locus_tag=SOPEG_3090 NZ_CP006568.1 Protein Homology CDS 3325660 3326583 . + 0 ID=cds3356;Parent=gene3401;Dbxref=Genbank:WP_038468971.1;Name=WP_038468971.1;gbkey=CDS;product=transposase;protein_id=WP_038468971.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3326877 3327326 . + . ID=gene3402;Name=SOPEG_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16725;old_locus_tag=SOPEG_3091 NZ_CP006568.1 Protein Homology CDS 3326877 3327326 . + 0 ID=cds3357;Parent=gene3402;Dbxref=Genbank:WP_025246206.1;Name=WP_025246206.1;gbkey=CDS;product=GCN5 family acetyltransferase;protein_id=WP_025246206.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3327349 3327861 . + . ID=gene3403;Name=SOPEG_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16730 NZ_CP006568.1 Protein Homology CDS 3327349 3327861 . + 0 ID=cds3358;Parent=gene3403;Dbxref=Genbank:WP_051419842.1;Name=WP_051419842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419842.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3328204 3333455 . + . ID=id486;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3328242 3328721 . - . ID=gene3404;Name=SOPEG_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16735 NZ_CP006568.1 Protein Homology CDS 3328242 3328721 . - 0 ID=cds3359;Parent=gene3404;Dbxref=Genbank:WP_025246207.1;Name=WP_025246207.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246207.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3328854 3330062 . + . ID=gene3405;Name=SOPEG_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16740;old_locus_tag=SOPEG_3094 NZ_CP006568.1 Protein Homology CDS 3328854 3330062 . + 0 ID=cds3360;Parent=gene3405;Dbxref=Genbank:WP_025246208.1;Name=WP_025246208.1;gbkey=CDS;product=transposase;protein_id=WP_025246208.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3330371 3331120 . - . ID=gene3406;Name=SOPEG_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16745;old_locus_tag=SOPEG_3095 NZ_CP006568.1 Protein Homology CDS 3330371 3331120 . - 0 ID=cds3361;Parent=gene3406;Dbxref=Genbank:WP_025246209.1;Name=WP_025246209.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246209.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3331132 3332649 . - . ID=gene3407;Name=SOPEG_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16750;old_locus_tag=SOPEG_3096 NZ_CP006568.1 Protein Homology CDS 3331132 3332649 . - 0 ID=cds3362;Parent=gene3407;Dbxref=Genbank:WP_025246210.1;Name=WP_025246210.1;gbkey=CDS;product=transposase;protein_id=WP_025246210.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3332776 3333378 . - . ID=gene3408;Name=SOPEG_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16755 NZ_CP006568.1 Protein Homology CDS 3332776 3333378 . - 0 ID=cds3363;Parent=gene3408;Dbxref=Genbank:WP_025246211.1;Name=WP_025246211.1;gbkey=CDS;product=transposase;protein_id=WP_025246211.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3333455 3333790 . + . ID=gene3409;Name=SOPEG_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16760 NZ_CP006568.1 Protein Homology CDS 3333455 3333790 . + 0 ID=cds3364;Parent=gene3409;Dbxref=Genbank:WP_025246212.1;Name=WP_025246212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246212.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3333796 3334014 . - . ID=gene3410;Name=SOPEG_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16765;old_locus_tag=SOPEG_3098 NZ_CP006568.1 Protein Homology CDS 3333796 3334014 . - 0 ID=cds3365;Parent=gene3410;Dbxref=Genbank:WP_025246213.1;Name=WP_025246213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246213.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3334026 3335504 . - . ID=gene3411;Name=SOPEG_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16770;old_locus_tag=SOPEG_3099 NZ_CP006568.1 Protein Homology CDS 3334026 3335504 . - 0 ID=cds3366;Parent=gene3411;Dbxref=Genbank:WP_025246214.1;Name=WP_025246214.1;gbkey=CDS;product=ribosome-associated GTPase EngA;protein_id=WP_025246214.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3335641 3336822 . - . ID=gene3412;Name=SOPEG_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16775;old_locus_tag=SOPEG_3100 NZ_CP006568.1 Protein Homology CDS 3335641 3336822 . - 0 ID=cds3367;Parent=gene3412;Dbxref=Genbank:WP_025246215.1;Name=WP_025246215.1;gbkey=CDS;product=membrane biogenesis protein;protein_id=WP_025246215.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3336833 3337447 . - . ID=gene3413;Name=SOPEG_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16780;old_locus_tag=SOPEG_3101 NZ_CP006568.1 Protein Homology CDS 3336833 3337447 . - 0 ID=cds3368;Parent=gene3413;Dbxref=Genbank:WP_025246216.1;Name=WP_025246216.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246216.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3337461 3338735 . - . ID=gene3414;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SOPEG_RS16785;old_locus_tag=SOPEG_3102 NZ_CP006568.1 Protein Homology CDS 3337461 3338735 . - 0 ID=cds3369;Parent=gene3414;Dbxref=Genbank:WP_025246217.1;Name=WP_025246217.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=WP_025246217.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3338754 3339875 . - . ID=gene3415;Name=SOPEG_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16790;old_locus_tag=SOPEG_3103 NZ_CP006568.1 Protein Homology CDS 3338754 3339875 . - 0 ID=cds3370;Parent=gene3415;Dbxref=Genbank:WP_025246218.1;Name=WP_025246218.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=WP_025246218.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3339916 3340842 . - . ID=gene3416;Name=SOPEG_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16795;old_locus_tag=SOPEG_3104 NZ_CP006568.1 Protein Homology CDS 3339916 3340842 . - 0 ID=cds3371;Parent=gene3416;Dbxref=Genbank:WP_025246219.1;Name=WP_025246219.1;gbkey=CDS;product=cytoskeletal protein RodZ;protein_id=WP_025246219.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3340832 3341602 . - . ID=gene3417;Name=SOPEG_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16800;old_locus_tag=SOPEG_3105 NZ_CP006568.1 Protein Homology CDS 3340832 3341602 . - 0 ID=cds3372;Parent=gene3417;Dbxref=Genbank:WP_025246220.1;Name=WP_025246220.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_025246220.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3341669 3342832 . - . ID=gene3418;Name=SOPEG_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16805;old_locus_tag=SOPEG_3106 NZ_CP006568.1 Protein Homology CDS 3341669 3342832 . - 0 ID=cds3373;Parent=gene3418;Dbxref=Genbank:WP_025246221.1;Name=WP_025246221.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_025246221.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3343005 3343436 . - . ID=gene3419;Name=SOPEG_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16810;old_locus_tag=SOPEG_3107 NZ_CP006568.1 Protein Homology CDS 3343005 3343436 . - 0 ID=cds3374;Parent=gene3419;Dbxref=Genbank:WP_025246222.1;Name=WP_025246222.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_025246222.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3343737 3344081 . + . ID=gene3420;Name=SOPEG_RS16815;end_range=3344081,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16815;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3343737 3344081 . + 0 ID=cds3375;Parent=gene3420;end_range=3344081,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=thiosulfate sulfurtransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3344296 3345018 . - . ID=gene3421;Name=SOPEG_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16820;old_locus_tag=SOPEG_3109 NZ_CP006568.1 Protein Homology CDS 3344296 3345018 . - 0 ID=cds3376;Parent=gene3421;Dbxref=Genbank:WP_025246223.1;Name=WP_025246223.1;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;gbkey=CDS;product=enhanced serine sensitivity protein SseB;protein_id=WP_025246223.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3345097 3346275 . - . ID=gene3422;Name=SOPEG_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16825 NZ_CP006568.1 Protein Homology CDS 3345097 3346275 . - 0 ID=cds3377;Parent=gene3422;Dbxref=Genbank:WP_025246224.1;Name=WP_025246224.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=aminopeptidase B;protein_id=WP_025246224.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3346888 3348075 . - . ID=gene3423;Name=SOPEG_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16830;old_locus_tag=SOPEG_3111 NZ_CP006568.1 Protein Homology CDS 3346888 3348075 . - 0 ID=cds3378;Parent=gene3423;Dbxref=Genbank:WP_025246225.1;Name=WP_025246225.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_025246225.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3348123 3348621 . - . ID=gene3424;Name=SOPEG_RS16835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16835;pseudo=true NZ_CP006568.1 Protein Homology CDS 3348123 3348621 . - 0 ID=cds3379;Parent=gene3424;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3349029 3349785 . - . ID=gene3425;Name=SOPEG_RS16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16840;pseudo=true NZ_CP006568.1 Protein Homology CDS 3349029 3349785 . - 0 ID=cds3380;Parent=gene3425;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3349907 3350710 . + . ID=gene3426;Name=SOPEG_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16845;old_locus_tag=SOPEG_3114 NZ_CP006568.1 Protein Homology CDS 3349907 3350710 . + 0 ID=cds3381;Parent=gene3426;Dbxref=Genbank:WP_025246226.1;Name=WP_025246226.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_025246226.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3351028 3351792 . + . ID=gene3427;Name=SOPEG_RS16850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16850;pseudo=true NZ_CP006568.1 Protein Homology CDS 3351028 3351792 . + 0 ID=cds3382;Parent=gene3427;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;pseudo=true;transl_except=(pos:3351271..3351273%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3351761 3352405 . + . ID=gene3428;Name=SOPEG_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16855 NZ_CP006568.1 Protein Homology CDS 3351761 3352405 . + 0 ID=cds3383;Parent=gene3428;Dbxref=Genbank:WP_051419844.1;Name=WP_051419844.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419844.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3352761 3354014 . - . ID=gene3429;Name=SOPEG_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16860;old_locus_tag=SOPEG_3118 NZ_CP006568.1 Protein Homology CDS 3352761 3354014 . - 0 ID=cds3384;Parent=gene3429;Dbxref=Genbank:WP_025246229.1;Name=WP_025246229.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_025246229.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3354387 3354725 . - . ID=gene3430;Name=SOPEG_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16865;old_locus_tag=SOPEG_3119 NZ_CP006568.1 Protein Homology CDS 3354387 3354725 . - 0 ID=cds3385;Parent=gene3430;Dbxref=Genbank:WP_025246230.1;Name=WP_025246230.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 1;protein_id=WP_025246230.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3354786 3356099 . - . ID=gene3431;Name=SOPEG_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16870;old_locus_tag=SOPEG_3120 NZ_CP006568.1 Protein Homology CDS 3354786 3356099 . - 0 ID=cds3386;Parent=gene3431;Dbxref=Genbank:WP_025246231.1;Name=WP_025246231.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246231.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3356096 3356800 . - . ID=gene3432;Name=SOPEG_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16875 NZ_CP006568.1 Protein Homology CDS 3356096 3356800 . - 0 ID=cds3387;Parent=gene3432;Dbxref=Genbank:WP_025246232.1;Name=WP_025246232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246232.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3356953 3358379 . - . ID=gene3433;Name=SOPEG_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16880;pseudo=true NZ_CP006568.1 Protein Homology CDS 3356953 3358379 . - 0 ID=cds3388;Parent=gene3433;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;exception=annotated by transcript or proteomic data;gbkey=CDS;product=histidine kinase;pseudo=true;transl_except=(pos:complement(3358275..3358277)%2Caa:Other),(pos:complement(3357966..3357968)%2Caa:Other),(pos:complement(3357885..3357887)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3359143 3363030 . - . ID=gene3434;Name=SOPEG_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16885;old_locus_tag=SOPEG_3123 NZ_CP006568.1 Protein Homology CDS 3359143 3363030 . - 0 ID=cds3389;Parent=gene3434;Dbxref=Genbank:WP_025246236.1;Name=WP_025246236.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_025246236.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3363322 3364809 . + . ID=gene3435;Name=SOPEG_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16890;old_locus_tag=SOPEG_3124 NZ_CP006568.1 Protein Homology CDS 3363322 3364809 . + 0 ID=cds3390;Parent=gene3435;Dbxref=Genbank:WP_025246237.1;Name=WP_025246237.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_025246237.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3364858 3365373 . - . ID=gene3436;Name=SOPEG_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16895;old_locus_tag=SOPEG_3125 NZ_CP006568.1 Protein Homology CDS 3364858 3365373 . - 0 ID=cds3391;Parent=gene3436;Dbxref=Genbank:WP_025246238.1;Name=WP_025246238.1;gbkey=CDS;product=tRNA adenosine deaminase;protein_id=WP_025246238.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3365440 3366076 . - . ID=gene3437;Name=SOPEG_RS16900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16900;pseudo=true NZ_CP006568.1 Protein Homology CDS 3365440 3366076 . - 0 ID=cds3392;Parent=gene3437;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3366080 3367391 . - . ID=gene3438;Name=SOPEG_RS16905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16905;pseudo=true NZ_CP006568.1 Protein Homology CDS 3366080 3367391 . - 0 ID=cds3393;Parent=gene3438;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3367545 3368422 . - . ID=gene3439;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=pseudogene;gene_synonym=yfeU;locus_tag=SOPEG_RS16910;pseudo=true NZ_CP006568.1 Protein Homology CDS 3367545 3368422 . - 0 ID=cds3394;Parent=gene3439;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid-6-phosphate etherase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3368566 3369414 . + . ID=gene3440;Name=SOPEG_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16915;old_locus_tag=SOPEG_3129 NZ_CP006568.1 Protein Homology CDS 3368566 3369414 . + 0 ID=cds3395;Parent=gene3440;Dbxref=Genbank:WP_025246239.1;Name=WP_025246239.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246239.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3369422 3369916 . - . ID=gene3441;Name=SOPEG_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16920 NZ_CP006568.1 Protein Homology CDS 3369422 3369916 . - 0 ID=cds3396;Parent=gene3441;Dbxref=Genbank:WP_025246240.1;Name=WP_025246240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246240.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3369871 3372453 . + . ID=id487;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3370049 3370795 . + . ID=gene3442;Name=SOPEG_RS16925;end_range=3370795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16925;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3370049 3370795 . + 0 ID=cds3397;Parent=gene3442;end_range=3370795,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3371083 3371568 . + . ID=gene3443;Name=SOPEG_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16930 NZ_CP006568.1 Protein Homology CDS 3371083 3371568 . + 0 ID=cds3398;Parent=gene3443;Dbxref=Genbank:WP_051419847.1;Name=WP_051419847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419847.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3371580 3372329 . + . ID=gene3444;Name=SOPEG_RS16935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16935;pseudo=true NZ_CP006568.1 Protein Homology CDS 3371580 3372329 . + 0 ID=cds3399;Parent=gene3444;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3371712..3371714%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3372410 3372646 . + . ID=gene3445;Name=SOPEG_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16940 NZ_CP006568.1 Protein Homology CDS 3372410 3372646 . + 0 ID=cds3400;Parent=gene3445;Dbxref=Genbank:WP_025246244.1;Name=WP_025246244.1;gbkey=CDS;product=ferredoxin;protein_id=WP_025246244.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3372671 3373051 . - . ID=gene3446;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SOPEG_RS16945;old_locus_tag=SOPEG_3134 NZ_CP006568.1 Protein Homology CDS 3372671 3373051 . - 0 ID=cds3401;Parent=gene3446;Dbxref=Genbank:WP_025246245.1;Name=WP_025246245.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=4'-phosphopantetheinyl transferase;protein_id=WP_025246245.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3373051 3373782 . - . ID=gene3447;Name=SOPEG_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16950;old_locus_tag=SOPEG_3135 NZ_CP006568.1 Protein Homology CDS 3373051 3373782 . - 0 ID=cds3402;Parent=gene3447;Dbxref=Genbank:WP_025246246.1;Name=WP_025246246.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_025246246.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3373938 3374627 . - . ID=gene3448;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SOPEG_RS16955 NZ_CP006568.1 Protein Homology CDS 3373938 3374627 . - 0 ID=cds3403;Parent=gene3448;Dbxref=Genbank:WP_038470377.1;Name=WP_038470377.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_038470377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3374637 3375542 . - . ID=gene3449;Name=SOPEG_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16960;old_locus_tag=SOPEG_3137 NZ_CP006568.1 Protein Homology CDS 3374637 3375542 . - 0 ID=cds3404;Parent=gene3449;Dbxref=Genbank:WP_025246247.1;Name=WP_025246247.1;gbkey=CDS;product=GTPase Era;protein_id=WP_025246247.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3375539 3376219 . - . ID=gene3450;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SOPEG_RS16965;old_locus_tag=SOPEG_3138 NZ_CP006568.1 Protein Homology CDS 3375539 3376219 . - 0 ID=cds3405;Parent=gene3450;Dbxref=Genbank:WP_025246248.1;Name=WP_025246248.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=WP_025246248.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3376397 3377383 . - . ID=gene3451;Name=SOPEG_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16970;old_locus_tag=SOPEG_3139 NZ_CP006568.1 Protein Homology CDS 3376397 3377383 . - 0 ID=cds3406;Parent=gene3451;Dbxref=Genbank:WP_025246249.1;Name=WP_025246249.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_025246249.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3377399 3379198 . - . ID=gene3452;Name=SOPEG_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16975;old_locus_tag=SOPEG_3140 NZ_CP006568.1 Protein Homology CDS 3377399 3379198 . - 0 ID=cds3407;Parent=gene3452;Dbxref=Genbank:WP_025246250.1;Name=WP_025246250.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_025246250.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3379365 3379766 . - . ID=gene3453;Name=SOPEG_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16980;old_locus_tag=SOPEG_3141 NZ_CP006568.1 Protein Homology CDS 3379365 3379766 . - 0 ID=cds3408;Parent=gene3453;Dbxref=Genbank:WP_025246251.1;Name=WP_025246251.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246251.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3379769 3381495 . + . ID=id488;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3380184 3381416 . - . ID=gene3454;Name=SOPEG_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16985;old_locus_tag=SOPEG_3142 NZ_CP006568.1 Protein Homology CDS 3380184 3381416 . - 0 ID=cds3409;Parent=gene3454;Dbxref=Genbank:WP_025246252.1;Name=WP_025246252.1;gbkey=CDS;product=transposase;protein_id=WP_025246252.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3381819 3382370 . - . ID=gene3455;Name=SOPEG_RS16990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS16990;pseudo=true NZ_CP006568.1 Protein Homology CDS 3381819 3382370 . - 0 ID=cds3410;Parent=gene3455;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3382173..3382175)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3382434 3384149 . + . ID=id489;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3382501 3383733 . + . ID=gene3456;Name=SOPEG_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS16995;old_locus_tag=SOPEG_3144 NZ_CP006568.1 Protein Homology CDS 3382501 3383733 . + 0 ID=cds3411;Parent=gene3456;Dbxref=Genbank:WP_025246253.1;Name=WP_025246253.1;gbkey=CDS;product=transposase;protein_id=WP_025246253.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3384282 3385367 . + . ID=gene3457;Name=SOPEG_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17000;old_locus_tag=SOPEG_3145 NZ_CP006568.1 Protein Homology CDS 3384282 3385367 . + 0 ID=cds3412;Parent=gene3457;Dbxref=Genbank:WP_051419849.1;Name=WP_051419849.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419849.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3386042 3386335 . - . ID=gene3458;Name=SOPEG_RS17005;end_range=3386335,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17005;partial=true;pseudo=true;start_range=.,3386042 NZ_CP006568.1 Protein Homology CDS 3386042 3386335 . - 0 ID=cds3413;Parent=gene3458;end_range=3386335,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3386042;transl_table=11 NZ_CP006568.1 RefSeq gene 3386342 3387160 . - . ID=gene3459;Name=SOPEG_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23245;old_locus_tag=SOPEG_ps3148 NZ_CP006568.1 Protein Homology CDS 3386342 3387160 . - 0 ID=cds3414;Parent=gene3459;Dbxref=Genbank:WP_051419851.1;Name=WP_051419851.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419851.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3387159 3388099 . + . ID=gene3460;Name=SOPEG_RS17015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17015;pseudo=true NZ_CP006568.1 Protein Homology CDS 3387159 3388099 . + 0 ID=cds3415;Parent=gene3460;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3388236 3388598 . + . ID=gene3461;Name=SOPEG_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17020;old_locus_tag=SOPEG_3150 NZ_CP006568.1 Protein Homology CDS 3388236 3388598 . + 0 ID=cds3416;Parent=gene3461;Dbxref=Genbank:WP_025246254.1;Name=WP_025246254.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246254.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3388634 3389146 . + . ID=gene3462;Name=SOPEG_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17025;old_locus_tag=SOPEG_3151 NZ_CP006568.1 Protein Homology CDS 3388634 3389146 . + 0 ID=cds3417;Parent=gene3462;Dbxref=Genbank:WP_025246255.1;Name=WP_025246255.1;gbkey=CDS;product=metal-dependent hydrolase;protein_id=WP_025246255.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3390503 3390862 . + . ID=gene3463;Name=SOPEG_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17030 NZ_CP006568.1 Protein Homology CDS 3390503 3390862 . + 0 ID=cds3418;Parent=gene3463;Dbxref=Genbank:WP_025246256.1;Name=WP_025246256.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246256.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3390859 3391182 . + . ID=gene3464;Name=SOPEG_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17035 NZ_CP006568.1 GeneMarkS+ CDS 3390859 3391182 . + 0 ID=cds3419;Parent=gene3464;Dbxref=Genbank:WP_025246257.1;Name=WP_025246257.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246257.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3391255 3392468 . - . ID=gene3465;Name=SOPEG_RS17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17040;pseudo=true NZ_CP006568.1 Protein Homology CDS 3391255 3392468 . - 0 ID=cds3420;Parent=gene3465;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3393009 3393869 . - . ID=gene3466;Name=SOPEG_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17045;old_locus_tag=SOPEG_3154 NZ_CP006568.1 Protein Homology CDS 3393009 3393869 . - 0 ID=cds3421;Parent=gene3466;Dbxref=Genbank:WP_025246258.1;Name=WP_025246258.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_025246258.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3394085 3394264 . - . ID=gene3467;Name=SOPEG_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17050;old_locus_tag=SOPEG_3155 NZ_CP006568.1 Protein Homology CDS 3394085 3394264 . - 0 ID=cds3422;Parent=gene3467;Dbxref=Genbank:WP_025246259.1;Name=WP_025246259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246259.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3394351 3394830 . - . ID=gene3468;Name=SOPEG_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17055;old_locus_tag=SOPEG_3156 NZ_CP006568.1 Protein Homology CDS 3394351 3394830 . - 0 ID=cds3423;Parent=gene3468;Dbxref=Genbank:WP_025246260.1;Name=WP_025246260.1;gbkey=CDS;product=MerR family transcriptional regulator;protein_id=WP_025246260.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3394919 3395353 . + . ID=gene3469;Name=SOPEG_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17060 NZ_CP006568.1 GeneMarkS+ CDS 3394919 3395353 . + 0 ID=cds3424;Parent=gene3469;Dbxref=Genbank:WP_025246261.1;Name=WP_025246261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246261.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3395307 3396627 . + . ID=id490;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3395344 3396552 . - . ID=gene3470;Name=SOPEG_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17065;old_locus_tag=SOPEG_3158 NZ_CP006568.1 Protein Homology CDS 3395344 3396552 . - 0 ID=cds3425;Parent=gene3470;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3396672 3397307 . - . ID=gene3471;Name=SOPEG_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17070 NZ_CP006568.1 Protein Homology CDS 3396672 3397307 . - 0 ID=cds3426;Parent=gene3471;Dbxref=Genbank:WP_025246262.1;Name=WP_025246262.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246262.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3396683 3399042 . + . ID=id491;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3397394 3398869 . - . ID=gene3472;Name=SOPEG_RS17075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17075;old_locus_tag=SOPEG_3160;partial=true;pseudo=true;start_range=.,3397394 NZ_CP006568.1 Protein Homology CDS 3397394 3398869 . - 0 ID=cds3427;Parent=gene3472;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3397394;transl_table=11 NZ_CP006568.1 RefSeq gene 3398997 3400514 . + . ID=gene3473;Name=SOPEG_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17080 NZ_CP006568.1 Protein Homology CDS 3398997 3400514 . + 0 ID=cds3428;Parent=gene3473;Dbxref=Genbank:WP_051419853.1;Name=WP_051419853.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419853.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3400681 3402916 . + . ID=gene3474;Name=SOPEG_RS17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17085;partial=true;pseudo=true;start_range=.,3400681 NZ_CP006568.1 Protein Homology CDS 3400681 3402916 . + 0 ID=cds3429;Parent=gene3474;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=phosphoketolase;pseudo=true;start_range=.,3400681;transl_table=11 NZ_CP006568.1 RefSeq gene 3402961 3404384 . - . ID=gene3475;Name=SOPEG_RS17090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17090;pseudo=true NZ_CP006568.1 Protein Homology CDS 3402961 3404384 . - 0 ID=cds3430;Parent=gene3475;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3403386..3403388)%2Caa:Other),(pos:complement(3403073..3403075)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3404707 3406863 . - . ID=gene3476;Name=SOPEG_RS17095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17095;pseudo=true NZ_CP006568.1 Protein Homology CDS 3404707 3406863 . - 0 ID=cds3431;Parent=gene3476;gbkey=CDS;product=diguanylate cyclase;pseudo=true;transl_except=(pos:complement(3406831..3406833)%2Caa:Other),(pos:complement(3404812..3404814)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3407225 3407668 . + . ID=gene3477;Name=SOPEG_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17100;old_locus_tag=SOPEG_3164 NZ_CP006568.1 Protein Homology CDS 3407225 3407668 . + 0 ID=cds3432;Parent=gene3477;Dbxref=Genbank:WP_025246265.1;Name=WP_025246265.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_025246265.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3407665 3409353 . + . ID=gene3478;Name=SOPEG_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17105;old_locus_tag=SOPEG_3165 NZ_CP006568.1 Protein Homology CDS 3407665 3409353 . + 0 ID=cds3433;Parent=gene3478;Dbxref=Genbank:WP_025246266.1;Name=WP_025246266.1;gbkey=CDS;product=major facilitator transporter;protein_id=WP_025246266.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3409350 3410492 . + . ID=gene3479;Name=SOPEG_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17110;old_locus_tag=SOPEG_3166 NZ_CP006568.1 Protein Homology CDS 3409350 3410492 . + 0 ID=cds3434;Parent=gene3479;Dbxref=Genbank:WP_025246267.1;Name=WP_025246267.1;gbkey=CDS;product=DSBA oxidoreductase;protein_id=WP_025246267.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3410629 3411054 . + . ID=gene3480;Name=SOPEG_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23250 NZ_CP006568.1 Protein Homology CDS 3410629 3411054 . + 0 ID=cds3435;Parent=gene3480;Dbxref=Genbank:WP_025246268.1;Name=WP_025246268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246268.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3411070 3411303 . + . ID=gene3481;Name=SOPEG_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23255 NZ_CP006568.1 GeneMarkS+ CDS 3411070 3411303 . + 0 ID=cds3436;Parent=gene3481;Dbxref=Genbank:WP_025246269.1;Name=WP_025246269.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246269.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3411304 3413950 . - . ID=gene3482;Name=SOPEG_RS17120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17120;pseudo=true NZ_CP006568.1 Protein Homology CDS 3411304 3413950 . - 0 ID=cds3437;Parent=gene3482;exception=annotated by transcript or proteomic data;gbkey=CDS;product=carbonate dehydratase;pseudo=true;transl_except=(pos:complement(3412561..3412563)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3413984 3415048 . + . ID=id492;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3414063 3414989 . + . ID=gene3483;Name=SOPEG_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17125 NZ_CP006568.1 Protein Homology CDS 3414063 3414989 . + 0 ID=cds3438;Parent=gene3483;Dbxref=Genbank:WP_025246270.1;Name=WP_025246270.1;gbkey=CDS;product=transposase;protein_id=WP_025246270.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3415171 3416493 . + . ID=id493;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3415248 3416456 . + . ID=gene3484;Name=SOPEG_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17130;old_locus_tag=SOPEG_3170 NZ_CP006568.1 Protein Homology CDS 3415248 3416456 . + 0 ID=cds3439;Parent=gene3484;Dbxref=Genbank:WP_025246271.1;Name=WP_025246271.1;gbkey=CDS;product=transposase;protein_id=WP_025246271.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3416548 3416859 . - . ID=gene3485;Name=SOPEG_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23260 NZ_CP006568.1 Protein Homology CDS 3416548 3416859 . - 0 ID=cds3440;Parent=gene3485;Dbxref=Genbank:WP_051419855.1;Name=WP_051419855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419855.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3416934 3417269 . - . ID=gene3486;Name=SOPEG_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23265 NZ_CP006568.1 Protein Homology CDS 3416934 3417269 . - 0 ID=cds3441;Parent=gene3486;Dbxref=Genbank:WP_051419857.1;Name=WP_051419857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419857.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3417274 3418248 . - . ID=gene3487;Name=SOPEG_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23270 NZ_CP006568.1 Protein Homology CDS 3417274 3418248 . - 0 ID=cds3442;Parent=gene3487;Dbxref=Genbank:WP_051419859.1;Name=WP_051419859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419859.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3419130 3420336 . + . ID=id494;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3419189 3420112 . - . ID=gene3488;Name=SOPEG_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17140;old_locus_tag=SOPEG_3172 NZ_CP006568.1 Protein Homology CDS 3419189 3420112 . - 0 ID=cds3443;Parent=gene3488;Dbxref=Genbank:WP_025246272.1;Name=WP_025246272.1;gbkey=CDS;product=transposase;protein_id=WP_025246272.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3420173 3420463 . - . ID=gene3489;Name=SOPEG_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17145 NZ_CP006568.1 Protein Homology CDS 3420173 3420463 . - 0 ID=cds3444;Parent=gene3489;Dbxref=Genbank:WP_051419866.1;Name=WP_051419866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419866.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3420880 3421341 . + . ID=gene3490;Name=SOPEG_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17150;old_locus_tag=SOPEG_3174 NZ_CP006568.1 Protein Homology CDS 3420880 3421341 . + 0 ID=cds3445;Parent=gene3490;Dbxref=Genbank:WP_051419868.1;Name=WP_051419868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419868.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3421830 3422168 . - . ID=gene3491;Name=SOPEG_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17155 NZ_CP006568.1 GeneMarkS+ CDS 3421830 3422168 . - 0 ID=cds3446;Parent=gene3491;Dbxref=Genbank:WP_025246275.1;Name=WP_025246275.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246275.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3422175 3422435 . - . ID=gene3492;Name=SOPEG_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17160 NZ_CP006568.1 GeneMarkS+ CDS 3422175 3422435 . - 0 ID=cds3447;Parent=gene3492;Dbxref=Genbank:WP_025246276.1;Name=WP_025246276.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246276.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3422417 3423157 . - . ID=gene3493;Name=SOPEG_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17165 NZ_CP006568.1 Protein Homology CDS 3422417 3423157 . - 0 ID=cds3448;Parent=gene3493;Dbxref=Genbank:WP_025246277.1;Name=WP_025246277.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246277.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3423265 3424196 . + . ID=gene3494;Name=SOPEG_RS17170;end_range=3424196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17170;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3423265 3424196 . + 0 ID=cds3449;Parent=gene3494;end_range=3424196,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3424197 3424298 . + . ID=id495;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3424304 3425062 . - . ID=gene3495;Name=SOPEG_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17175;old_locus_tag=SOPEG_3177 NZ_CP006568.1 Protein Homology CDS 3424304 3425062 . - 0 ID=cds3450;Parent=gene3495;Dbxref=Genbank:WP_025246278.1;Name=WP_025246278.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246278.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3425492 3431231 . + . ID=id496;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3425655 3426578 . - . ID=gene3496;Name=SOPEG_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17180;old_locus_tag=SOPEG_3178 NZ_CP006568.1 Protein Homology CDS 3425655 3426578 . - 0 ID=cds3451;Parent=gene3496;Dbxref=Genbank:WP_025246279.1;Name=WP_025246279.1;gbkey=CDS;product=transposase;protein_id=WP_025246279.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3426814 3427731 . + . ID=gene3497;Name=SOPEG_RS17185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17185;partial=true;pseudo=true;start_range=.,3426814 NZ_CP006568.1 Protein Homology CDS 3426814 3427731 . + 0 ID=cds3452;Parent=gene3497;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3426814;transl_table=11 NZ_CP006568.1 RefSeq gene 3428241 3429050 . + . ID=gene3498;Name=SOPEG_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23275 NZ_CP006568.1 Protein Homology CDS 3428241 3429050 . + 0 ID=cds3453;Parent=gene3498;Dbxref=Genbank:WP_051419870.1;Name=WP_051419870.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419870.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3429047 3429589 . + . ID=gene3499;Name=SOPEG_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23280 NZ_CP006568.1 Protein Homology CDS 3429047 3429589 . + 0 ID=cds3454;Parent=gene3499;Dbxref=Genbank:WP_051419873.1;Name=WP_051419873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419873.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3429783 3430310 . + . ID=gene3500;Name=SOPEG_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17195;old_locus_tag=SOPEG_3182 NZ_CP006568.1 Protein Homology CDS 3429783 3430310 . + 0 ID=cds3455;Parent=gene3500;Dbxref=Genbank:WP_025246280.1;Name=WP_025246280.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_025246280.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3430420 3430612 . + . ID=gene3501;Name=SOPEG_RS17200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17200;pseudo=true NZ_CP006568.1 Protein Homology CDS 3430420 3430612 . + 0 ID=cds3456;Parent=gene3501;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3430968 3431729 . + . ID=gene3502;Name=SOPEG_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17205;old_locus_tag=SOPEG_3184 NZ_CP006568.1 Protein Homology CDS 3430968 3431729 . + 0 ID=cds3457;Parent=gene3502;Dbxref=Genbank:WP_025246281.1;Name=WP_025246281.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246281.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3431391 3432825 . + . ID=id497;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3431842 3432138 . + . ID=gene3503;Name=SOPEG_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17210;old_locus_tag=SOPEG_3185 NZ_CP006568.1 Protein Homology CDS 3431842 3432138 . + 0 ID=cds3458;Parent=gene3503;Dbxref=Genbank:WP_025246282.1;Name=WP_025246282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246282.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3432399 3432829 . - . ID=gene3504;Name=SOPEG_RS17215;end_range=3432829,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17215;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3432399 3432829 . - 0 ID=cds3459;Parent=gene3504;Note=Required for efficient pilin antigenic variation;end_range=3432829,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=recombination associated protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3432837 3435409 . + . ID=id498;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3433102 3434526 . + . ID=gene3505;Name=SOPEG_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17220 NZ_CP006568.1 Protein Homology CDS 3433102 3434526 . + 0 ID=cds3460;Parent=gene3505;Dbxref=Genbank:WP_051419875.1;Name=WP_051419875.1;gbkey=CDS;product=transposase;protein_id=WP_051419875.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3434538 3435286 . + . ID=gene3506;Name=SOPEG_RS17225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17225;pseudo=true NZ_CP006568.1 Protein Homology CDS 3434538 3435286 . + 0 ID=cds3461;Parent=gene3506;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3435438 3438930 . + . ID=id499;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3435478 3436686 . - . ID=gene3507;Name=SOPEG_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17230;old_locus_tag=SOPEG_3189 NZ_CP006568.1 Protein Homology CDS 3435478 3436686 . - 0 ID=cds3462;Parent=gene3507;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3437024 3437947 . - . ID=gene3508;Name=SOPEG_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17235;old_locus_tag=SOPEG_3190 NZ_CP006568.1 Protein Homology CDS 3437024 3437947 . - 0 ID=cds3463;Parent=gene3508;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3438949 3439368 . + . ID=gene3509;Name=SOPEG_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17240 NZ_CP006568.1 Protein Homology CDS 3438949 3439368 . + 0 ID=cds3464;Parent=gene3509;Dbxref=Genbank:WP_025246286.1;Name=WP_025246286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246286.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3438980 3442210 . + . ID=id500;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3439408 3439728 . + . ID=gene3510;Name=SOPEG_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17245 NZ_CP006568.1 Protein Homology CDS 3439408 3439728 . + 0 ID=cds3465;Parent=gene3510;Dbxref=Genbank:WP_038468223.1;Name=WP_038468223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468223.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3439921 3440814 . + . ID=gene3511;Name=SOPEG_RS17250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17250;pseudo=true NZ_CP006568.1 Protein Homology CDS 3439921 3440814 . + 0 ID=cds3466;Parent=gene3511;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fructokinase;pseudo=true;transl_except=(pos:3440613..3440615%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3441101 3441715 . - . ID=gene3512;Name=SOPEG_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23285 NZ_CP006568.1 GeneMarkS+ CDS 3441101 3441715 . - 0 ID=cds3467;Parent=gene3512;Dbxref=Genbank:WP_025246287.1;Name=WP_025246287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246287.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3441722 3442525 . - . ID=gene3513;Name=SOPEG_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23290 NZ_CP006568.1 Protein Homology CDS 3441722 3442525 . - 0 ID=cds3468;Parent=gene3513;Dbxref=Genbank:WP_025246288.1;Name=WP_025246288.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246288.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3442310 3443638 . + . ID=id501;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3442679 3443491 . - . ID=gene3514;Name=SOPEG_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23295 NZ_CP006568.1 Protein Homology CDS 3442679 3443491 . - 0 ID=cds3469;Parent=gene3514;Dbxref=Genbank:WP_025246289.1;Name=WP_025246289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246289.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3443480 3444802 . + . ID=gene3515;Name=SOPEG_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23300 NZ_CP006568.1 GeneMarkS+ CDS 3443480 3444802 . + 0 ID=cds3470;Parent=gene3515;Dbxref=Genbank:WP_025246290.1;Name=WP_025246290.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246290.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3443646 3444027 . + . ID=id502;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 3444036 3446542 . + . ID=id503;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3444820 3446040 . - . ID=gene3516;Name=SOPEG_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17260;old_locus_tag=SOPEG_3194 NZ_CP006568.1 Protein Homology CDS 3444820 3446040 . - 0 ID=cds3471;Parent=gene3516;Dbxref=Genbank:WP_025246291.1;Name=WP_025246291.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_025246291.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3446415 3446615 . + . ID=gene3517;Name=SOPEG_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17265 NZ_CP006568.1 GeneMarkS+ CDS 3446415 3446615 . + 0 ID=cds3472;Parent=gene3517;Dbxref=Genbank:WP_025246292.1;Name=WP_025246292.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246292.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3446580 3456767 . + . ID=id504;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3446656 3447843 . + . ID=gene3518;Name=SOPEG_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17270 NZ_CP006568.1 Protein Homology CDS 3446656 3447843 . + 0 ID=cds3473;Parent=gene3518;Dbxref=Genbank:WP_038468983.1;Name=WP_038468983.1;gbkey=CDS;product=transposase;protein_id=WP_038468983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3447912 3448151 . + . ID=gene3519;Name=SOPEG_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17275 NZ_CP006568.1 GeneMarkS+ CDS 3447912 3448151 . + 0 ID=cds3474;Parent=gene3519;Dbxref=Genbank:WP_025246293.1;Name=WP_025246293.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246293.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3448148 3449119 . - . ID=gene3520;Name=SOPEG_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17280;old_locus_tag=SOPEG_3196 NZ_CP006568.1 Protein Homology CDS 3448148 3449119 . - 0 ID=cds3475;Parent=gene3520;Dbxref=Genbank:WP_025246294.1;Name=WP_025246294.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_025246294.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3449129 3450944 . - . ID=gene3521;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=SOPEG_RS17285;pseudo=true NZ_CP006568.1 Protein Homology CDS 3449129 3450944 . - 0 ID=cds3476;Parent=gene3521;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3451005 3451337 . - . ID=gene3522;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SOPEG_RS17290;old_locus_tag=SOPEG_3198 NZ_CP006568.1 Protein Homology CDS 3451005 3451337 . - 0 ID=cds3477;Parent=gene3522;Dbxref=Genbank:WP_025246295.1;Name=WP_025246295.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_025246295.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3451338 3452486 . - . ID=gene3523;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=SOPEG_RS17295;pseudo=true NZ_CP006568.1 Protein Homology CDS 3451338 3452486 . - 0 ID=cds3478;Parent=gene3523;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;pseudo=true;transl_except=(pos:complement(3451974..3451976)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3452677 3453743 . - . ID=gene3524;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=SOPEG_RS17300;pseudo=true NZ_CP006568.1 Protein Homology CDS 3452677 3453743 . - 0 ID=cds3479;Parent=gene3524;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3453848 3454435 . + . ID=gene3525;Name=SOPEG_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17305;old_locus_tag=SOPEG_3201 NZ_CP006568.1 Protein Homology CDS 3453848 3454435 . + 0 ID=cds3480;Parent=gene3525;Dbxref=Genbank:WP_025246296.1;Name=WP_025246296.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_025246296.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3454780 3455551 . + . ID=gene3526;Name=SOPEG_RS17310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17310;pseudo=true NZ_CP006568.1 Protein Homology CDS 3454780 3455551 . + 0 ID=cds3481;Parent=gene3526;exception=annotated by transcript or proteomic data;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3455784 3456707 . + . ID=gene3527;Name=SOPEG_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17315;old_locus_tag=SOPEG_3203 NZ_CP006568.1 Protein Homology CDS 3455784 3456707 . + 0 ID=cds3482;Parent=gene3527;Dbxref=Genbank:WP_025244443.1;Name=WP_025244443.1;gbkey=CDS;product=transposase;protein_id=WP_025244443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3456775 3457116 . + . ID=gene3528;Name=SOPEG_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17320 NZ_CP006568.1 Protein Homology CDS 3456775 3457116 . + 0 ID=cds3483;Parent=gene3528;Dbxref=Genbank:WP_025246297.1;Name=WP_025246297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246297.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3457260 3458431 . - . ID=gene3529;Name=SOPEG_RS17325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17325;partial=true;pseudo=true;start_range=.,3457260 NZ_CP006568.1 Protein Homology CDS 3457260 3458431 . - 0 ID=cds3484;Parent=gene3529;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=chloride channel protein;pseudo=true;start_range=.,3457260;transl_table=11 NZ_CP006568.1 RefSeq gene 3458831 3459917 . + . ID=gene3530;Name=SOPEG_RS17330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17330;pseudo=true NZ_CP006568.1 Protein Homology CDS 3458831 3459917 . + 0 ID=cds3485;Parent=gene3530;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3460135 3460335 . + . ID=gene3531;Name=SOPEG_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17335 NZ_CP006568.1 GeneMarkS+ CDS 3460135 3460335 . + 0 ID=cds3486;Parent=gene3531;Dbxref=Genbank:WP_025246301.1;Name=WP_025246301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246301.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3460744 3461883 . + . ID=gene3532;Name=SOPEG_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17340;old_locus_tag=SOPEG_3207 NZ_CP006568.1 Protein Homology CDS 3460744 3461883 . + 0 ID=cds3487;Parent=gene3532;Dbxref=Genbank:WP_025246302.1;Name=WP_025246302.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase;protein_id=WP_025246302.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3461885 3462865 . + . ID=gene3533;Name=SOPEG_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17345;old_locus_tag=SOPEG_3208 NZ_CP006568.1 Protein Homology CDS 3461885 3462865 . + 0 ID=cds3488;Parent=gene3533;Dbxref=Genbank:WP_025246303.1;Name=WP_025246303.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_025246303.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3462862 3464844 . + . ID=gene3534;Name=SOPEG_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17350;old_locus_tag=SOPEG_3209 NZ_CP006568.1 Protein Homology CDS 3462862 3464844 . + 0 ID=cds3489;Parent=gene3534;Dbxref=Genbank:WP_025246304.1;Name=WP_025246304.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=WP_025246304.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3464841 3465734 . + . ID=gene3535;Name=SOPEG_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17355;old_locus_tag=SOPEG_3210 NZ_CP006568.1 Protein Homology CDS 3464841 3465734 . + 0 ID=cds3490;Parent=gene3535;Dbxref=Genbank:WP_025246305.1;Name=WP_025246305.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase;protein_id=WP_025246305.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3465742 3467394 . + . ID=gene3536;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=SOPEG_RS17360;old_locus_tag=SOPEG_3211 NZ_CP006568.1 Protein Homology CDS 3465742 3467394 . + 0 ID=cds3491;Parent=gene3536;Dbxref=Genbank:WP_025246306.1;Name=WP_025246306.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=WP_025246306.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3467391 3467726 . + . ID=gene3537;Name=SOPEG_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17365;old_locus_tag=SOPEG_3212 NZ_CP006568.1 Protein Homology CDS 3467391 3467726 . + 0 ID=cds3492;Parent=gene3537;Dbxref=Genbank:WP_025246307.1;Name=WP_025246307.1;Note=with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=WP_025246307.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3467723 3468154 . + . ID=gene3538;Name=SOPEG_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17370;old_locus_tag=SOPEG_3213 NZ_CP006568.1 Protein Homology CDS 3467723 3468154 . + 0 ID=cds3493;Parent=gene3538;Dbxref=Genbank:WP_025246308.1;Name=WP_025246308.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=WP_025246308.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3468301 3468585 . + . ID=gene3539;Name=SOPEG_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17375 NZ_CP006568.1 Protein Homology CDS 3468301 3468585 . + 0 ID=cds3494;Parent=gene3539;Dbxref=Genbank:WP_051419877.1;Name=WP_051419877.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419877.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3468559 3469881 . + . ID=id505;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3468596 3469804 . - . ID=gene3540;Name=SOPEG_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17380;old_locus_tag=SOPEG_3215 NZ_CP006568.1 Protein Homology CDS 3468596 3469804 . - 0 ID=cds3495;Parent=gene3540;Dbxref=Genbank:WP_025245002.1;Name=WP_025245002.1;gbkey=CDS;product=transposase;protein_id=WP_025245002.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3469906 3470364 . - . ID=gene3541;Name=SOPEG_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17385;old_locus_tag=SOPEG_3216 NZ_CP006568.1 Protein Homology CDS 3469906 3470364 . - 0 ID=cds3496;Parent=gene3541;Dbxref=Genbank:WP_025246310.1;Name=WP_025246310.1;Note=involved in the reduction of the SoxR iron-sulfur cluster;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_025246310.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3470361 3471317 . - . ID=gene3542;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=SOPEG_RS17390;old_locus_tag=SOPEG_3217 NZ_CP006568.1 Protein Homology CDS 3470361 3471317 . - 0 ID=cds3497;Parent=gene3542;Dbxref=Genbank:WP_025246311.1;Name=WP_025246311.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_025246311.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3471317 3472012 . - . ID=gene3543;Name=SOPEG_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17395;old_locus_tag=SOPEG_3218 NZ_CP006568.1 Protein Homology CDS 3471317 3472012 . - 0 ID=cds3498;Parent=gene3543;Dbxref=Genbank:WP_025246312.1;Name=WP_025246312.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_025246312.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3472041 3472621 . - . ID=gene3544;Name=SOPEG_RS17400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17400;pseudo=true NZ_CP006568.1 Protein Homology CDS 3472041 3472621 . - 0 ID=cds3499;Parent=gene3544;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;exception=annotated by transcript or proteomic data;gbkey=CDS;product=RNA polymerase subunit sigma;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3473041 3474642 . + . ID=gene3545;Name=SOPEG_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17405;old_locus_tag=SOPEG_3220 NZ_CP006568.1 Protein Homology CDS 3473041 3474642 . + 0 ID=cds3500;Parent=gene3545;Dbxref=Genbank:WP_025246313.1;Name=WP_025246313.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_025246313.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3474693 3474905 . - . ID=gene3546;Name=SOPEG_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17410 NZ_CP006568.1 GeneMarkS+ CDS 3474693 3474905 . - 0 ID=cds3501;Parent=gene3546;Dbxref=Genbank:WP_025246314.1;Name=WP_025246314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246314.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3475036 3475302 . + . ID=gene3547;Name=SOPEG_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17415 NZ_CP006568.1 GeneMarkS+ CDS 3475036 3475302 . + 0 ID=cds3502;Parent=gene3547;Dbxref=Genbank:WP_025246315.1;Name=WP_025246315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246315.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3475336 3476399 . + . ID=id506;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3475397 3476320 . - . ID=gene3548;Name=SOPEG_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17420;old_locus_tag=SOPEG_3222 NZ_CP006568.1 Protein Homology CDS 3475397 3476320 . - 0 ID=cds3503;Parent=gene3548;Dbxref=Genbank:WP_025246316.1;Name=WP_025246316.1;gbkey=CDS;product=transposase;protein_id=WP_025246316.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3476368 3476766 . - . ID=gene3549;Name=SOPEG_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17425 NZ_CP006568.1 Protein Homology CDS 3476368 3476766 . - 0 ID=cds3504;Parent=gene3549;Dbxref=Genbank:WP_051419879.1;Name=WP_051419879.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419879.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3477259 3478002 . - . ID=gene3550;Name=SOPEG_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17430;old_locus_tag=SOPEG_3223 NZ_CP006568.1 Protein Homology CDS 3477259 3478002 . - 0 ID=cds3505;Parent=gene3550;Dbxref=Genbank:WP_025246318.1;Name=WP_025246318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246318.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3478117 3479460 . + . ID=gene3551;Name=SOPEG_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17435;old_locus_tag=SOPEG_3224 NZ_CP006568.1 Protein Homology CDS 3478117 3479460 . + 0 ID=cds3506;Parent=gene3551;Dbxref=Genbank:WP_025246319.1;Name=WP_025246319.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_025246319.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3480030 3480413 . - . ID=gene3552;Name=SOPEG_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17440;old_locus_tag=SOPEG_3225 NZ_CP006568.1 Protein Homology CDS 3480030 3480413 . - 0 ID=cds3507;Parent=gene3552;Dbxref=Genbank:WP_025246320.1;Name=WP_025246320.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_025246320.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3480732 3481415 . + . ID=gene3553;Name=SOPEG_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17445;old_locus_tag=SOPEG_3226 NZ_CP006568.1 Protein Homology CDS 3480732 3481415 . + 0 ID=cds3508;Parent=gene3553;Dbxref=Genbank:WP_025246321.1;Name=WP_025246321.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_025246321.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3481722 3482309 . - . ID=gene3554;Name=SOPEG_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17450;old_locus_tag=SOPEG_3227 NZ_CP006568.1 Protein Homology CDS 3481722 3482309 . - 0 ID=cds3509;Parent=gene3554;Dbxref=Genbank:WP_025246322.1;Name=WP_025246322.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=co-chaperone GrpE;protein_id=WP_025246322.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3482434 3483312 . + . ID=gene3555;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=SOPEG_RS17455;old_locus_tag=SOPEG_3228 NZ_CP006568.1 Protein Homology CDS 3482434 3483312 . + 0 ID=cds3510;Parent=gene3555;Dbxref=Genbank:WP_025246323.1;Name=WP_025246323.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate kinase;protein_id=WP_025246323.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3483345 3486139 . + . ID=id507;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3483976 3484827 . - . ID=gene3556;Name=SOPEG_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17460 NZ_CP006568.1 Protein Homology CDS 3483976 3484827 . - 0 ID=cds3511;Parent=gene3556;Dbxref=Genbank:WP_038468988.1;Name=WP_038468988.1;gbkey=CDS;product=transposase;protein_id=WP_038468988.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3484888 3486060 . - . ID=gene3557;Name=SOPEG_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17465 NZ_CP006568.1 Protein Homology CDS 3484888 3486060 . - 0 ID=cds3512;Parent=gene3557;Dbxref=Genbank:WP_051420011.1;Name=WP_051420011.1;gbkey=CDS;product=transposase;protein_id=WP_051420011.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3486149 3487810 . + . ID=gene3558;Name=SOPEG_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17470;old_locus_tag=SOPEG_3231 NZ_CP006568.1 Protein Homology CDS 3486149 3487810 . + 0 ID=cds3513;Parent=gene3558;Dbxref=Genbank:WP_025246325.1;Name=WP_025246325.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_025246325.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3487932 3491914 . + . ID=id508;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3489000 3490655 . - . ID=gene3559;Name=SOPEG_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17475;old_locus_tag=SOPEG_3235 NZ_CP006568.1 Protein Homology CDS 3489000 3490655 . - 0 ID=cds3514;Parent=gene3559;Dbxref=Genbank:WP_025246326.1;Name=WP_025246326.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246326.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3490660 3491196 . - . ID=gene3560;Name=SOPEG_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17480;old_locus_tag=SOPEG_3236 NZ_CP006568.1 Protein Homology CDS 3490660 3491196 . - 0 ID=cds3515;Parent=gene3560;Dbxref=Genbank:WP_025246327.1;Name=WP_025246327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246327.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3491171 3491881 . - . ID=gene3561;Name=SOPEG_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17485;old_locus_tag=SOPEG_3237 NZ_CP006568.1 Protein Homology CDS 3491171 3491881 . - 0 ID=cds3516;Parent=gene3561;Dbxref=Genbank:WP_025246328.1;Name=WP_025246328.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246328.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3492205 3493266 . + . ID=id509;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3492266 3493189 . - . ID=gene3562;Name=SOPEG_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17490;old_locus_tag=SOPEG_3239 NZ_CP006568.1 Protein Homology CDS 3492266 3493189 . - 0 ID=cds3517;Parent=gene3562;Dbxref=Genbank:WP_025246329.1;Name=WP_025246329.1;gbkey=CDS;product=transposase;protein_id=WP_025246329.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3493357 3493650 . - . ID=gene3563;Name=SOPEG_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17495 NZ_CP006568.1 GeneMarkS+ CDS 3493357 3493650 . - 0 ID=cds3518;Parent=gene3563;Dbxref=Genbank:WP_038468994.1;Name=WP_038468994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468994.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3493651 3494256 . - . ID=gene3564;Name=SOPEG_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23305;old_locus_tag=SOPEG_ps3240 NZ_CP006568.1 Protein Homology CDS 3493651 3494256 . - 0 ID=cds3519;Parent=gene3564;Dbxref=Genbank:WP_025246331.1;Name=WP_025246331.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246331.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3494210 3497804 . + . ID=id510;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3494337 3495086 . - . ID=gene3565;Name=SOPEG_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17505;old_locus_tag=SOPEG_3241 NZ_CP006568.1 Protein Homology CDS 3494337 3495086 . - 0 ID=cds3520;Parent=gene3565;Dbxref=Genbank:WP_025246332.1;Name=WP_025246332.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246332.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3495098 3496069 . - . ID=gene3566;Name=SOPEG_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23310 NZ_CP006568.1 Protein Homology CDS 3495098 3496069 . - 0 ID=cds3521;Parent=gene3566;Dbxref=Genbank:WP_051419881.1;Name=WP_051419881.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419881.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3496050 3496649 . - . ID=gene3567;Name=SOPEG_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17510 NZ_CP006568.1 Protein Homology CDS 3496050 3496649 . - 0 ID=cds3522;Parent=gene3567;Dbxref=Genbank:WP_051419883.1;Name=WP_051419883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419883.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3496978 3497595 . + . ID=gene3568;Name=SOPEG_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17515 NZ_CP006568.1 Protein Homology CDS 3496978 3497595 . + 0 ID=cds3523;Parent=gene3568;Dbxref=Genbank:WP_038468997.1;Name=WP_038468997.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468997.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3497603 3497743 . + . ID=gene3569;Name=SOPEG_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17520 NZ_CP006568.1 Protein Homology CDS 3497603 3497743 . + 0 ID=cds3524;Parent=gene3569;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3497967 3500356 . + . ID=id511;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3498370 3499578 . + . ID=gene3570;Name=SOPEG_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17525;old_locus_tag=SOPEG_3245 NZ_CP006568.1 Protein Homology CDS 3498370 3499578 . + 0 ID=cds3525;Parent=gene3570;Dbxref=Genbank:WP_025246334.1;Name=WP_025246334.1;gbkey=CDS;product=transposase;protein_id=WP_025246334.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3499849 3500295 . + . ID=gene3571;Name=SOPEG_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17530 NZ_CP006568.1 Protein Homology CDS 3499849 3500295 . + 0 ID=cds3526;Parent=gene3571;Dbxref=Genbank:WP_038470414.1;Name=WP_038470414.1;gbkey=CDS;product=transposase;protein_id=WP_038470414.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3501148 3501501 . + . ID=gene3572;Name=SOPEG_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17535;old_locus_tag=SOPEG_3247 NZ_CP006568.1 Protein Homology CDS 3501148 3501501 . + 0 ID=cds3527;Parent=gene3572;Dbxref=Genbank:WP_025246335.1;Name=WP_025246335.1;gbkey=CDS;product=membrane biogenesis protein;protein_id=WP_025246335.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3501624 3501908 . - . ID=gene3573;Name=SOPEG_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17540;old_locus_tag=SOPEG_3248 NZ_CP006568.1 Protein Homology CDS 3501624 3501908 . - 0 ID=cds3528;Parent=gene3573;Dbxref=Genbank:WP_025246336.1;Name=WP_025246336.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246336.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3501901 3502335 . - . ID=gene3574;Name=SOPEG_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17545;old_locus_tag=SOPEG_3249 NZ_CP006568.1 Protein Homology CDS 3501901 3502335 . - 0 ID=cds3529;Parent=gene3574;Dbxref=Genbank:WP_025246337.1;Name=WP_025246337.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246337.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3502495 3502977 . + . ID=gene3575;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SOPEG_RS17550;old_locus_tag=SOPEG_3250 NZ_CP006568.1 Protein Homology CDS 3502495 3502977 . + 0 ID=cds3530;Parent=gene3575;Dbxref=Genbank:WP_025246338.1;Name=WP_025246338.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_025246338.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3503505 3504832 . + . ID=id512;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3503583 3504791 . + . ID=gene3576;Name=SOPEG_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17555;old_locus_tag=SOPEG_3251 NZ_CP006568.1 Protein Homology CDS 3503583 3504791 . + 0 ID=cds3531;Parent=gene3576;Dbxref=Genbank:WP_025246339.1;Name=WP_025246339.1;gbkey=CDS;product=transposase;protein_id=WP_025246339.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3505134 3505367 . + . ID=gene3577;Name=SOPEG_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17560 NZ_CP006568.1 GeneMarkS+ CDS 3505134 3505367 . + 0 ID=cds3532;Parent=gene3577;Dbxref=Genbank:WP_025246340.1;Name=WP_025246340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246340.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3505441 3506082 . - . ID=gene3578;Name=SOPEG_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17565;old_locus_tag=SOPEG_3252 NZ_CP006568.1 Protein Homology CDS 3505441 3506082 . - 0 ID=cds3533;Parent=gene3578;Dbxref=Genbank:WP_025246341.1;Name=WP_025246341.1;gbkey=CDS;product=NAD-dependent dehydratase;protein_id=WP_025246341.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3506383 3506760 . - . ID=gene3579;Name=SOPEG_RS17570;end_range=3506760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17570;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3506383 3506760 . - 0 ID=cds3534;Parent=gene3579;end_range=3506760,.;gbkey=CDS;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_except=(pos:complement(3506692..3506694)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3506734 3507793 . + . ID=id513;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3506793 3507716 . - . ID=gene3580;Name=SOPEG_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17575;old_locus_tag=SOPEG_3254 NZ_CP006568.1 Protein Homology CDS 3506793 3507716 . - 0 ID=cds3535;Parent=gene3580;Dbxref=Genbank:WP_025244973.1;Name=WP_025244973.1;gbkey=CDS;product=transposase;protein_id=WP_025244973.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3507780 3508328 . - . ID=gene3581;Name=SOPEG_RS17580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17580;partial=true;pseudo=true;start_range=.,3507780 NZ_CP006568.1 Protein Homology CDS 3507780 3508328 . - 0 ID=cds3536;Parent=gene3581;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,3507780;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3508356 3509829 . + . ID=id514;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3508399 3508539 . - . ID=gene3582;Name=SOPEG_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17585 NZ_CP006568.1 Protein Homology CDS 3508399 3508539 . - 0 ID=cds3537;Parent=gene3582;Dbxref=Genbank:WP_038469001.1;Name=WP_038469001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469001.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3508845 3509768 . + . ID=gene3583;Name=SOPEG_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17590;old_locus_tag=SOPEG_3256 NZ_CP006568.1 Protein Homology CDS 3508845 3509768 . + 0 ID=cds3538;Parent=gene3583;Dbxref=Genbank:WP_025246343.1;Name=WP_025246343.1;gbkey=CDS;product=transposase;protein_id=WP_025246343.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3510149 3510412 . - . ID=gene3584;Name=SOPEG_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17595 NZ_CP006568.1 GeneMarkS+ CDS 3510149 3510412 . - 0 ID=cds3539;Parent=gene3584;Dbxref=Genbank:WP_025246344.1;Name=WP_025246344.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246344.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3510785 3512131 . - . ID=gene3585;Name=SOPEG_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23315;old_locus_tag=SOPEG_3257 NZ_CP006568.1 Protein Homology CDS 3510785 3512131 . - 0 ID=cds3540;Parent=gene3585;Dbxref=Genbank:WP_051419885.1;Name=WP_051419885.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419885.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3512541 3513317 . - . ID=gene3586;Name=SOPEG_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17605;old_locus_tag=SOPEG_3258 NZ_CP006568.1 Protein Homology CDS 3512541 3513317 . - 0 ID=cds3541;Parent=gene3586;Dbxref=Genbank:WP_025246346.1;Name=WP_025246346.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246346.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3513558 3515030 . - . ID=gene3587;Name=SOPEG_RS17610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17610;pseudo=true NZ_CP006568.1 Protein Homology CDS 3513558 3515030 . - 0 ID=cds3542;Parent=gene3587;gbkey=CDS;product=D-mannonate oxidoreductase;pseudo=true;transl_except=(pos:complement(3513888..3513890)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3515128 3516315 . - . ID=gene3588;Name=SOPEG_RS17615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17615;pseudo=true NZ_CP006568.1 Protein Homology CDS 3515128 3516315 . - 0 ID=cds3543;Parent=gene3588;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=mannonate dehydratase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3516589 3517341 . + . ID=gene3589;Name=SOPEG_RS17620;end_range=3517341,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17620;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3516589 3517341 . + 0 ID=cds3544;Parent=gene3589;end_range=3517341,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ArtI protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3517640 3518923 . - . ID=gene3590;Name=SOPEG_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17625 NZ_CP006568.1 Protein Homology CDS 3517640 3518923 . - 0 ID=cds3545;Parent=gene3590;Dbxref=Genbank:WP_051419887.1;Name=WP_051419887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419887.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3518972 3520293 . + . ID=id515;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3519048 3520122 . + . ID=gene3591;Name=SOPEG_RS17630;end_range=3520122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17630;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3519048 3520122 . + 0 ID=cds3546;Parent=gene3591;end_range=3520122,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3520290 3520844 . - . ID=gene3592;Name=SOPEG_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17635 NZ_CP006568.1 Protein Homology CDS 3520290 3520844 . - 0 ID=cds3547;Parent=gene3592;Dbxref=Genbank:WP_025246347.1;Name=WP_025246347.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246347.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3521451 3522098 . + . ID=gene3593;Name=SOPEG_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17640;old_locus_tag=SOPEG_3264 NZ_CP006568.1 Protein Homology CDS 3521451 3522098 . + 0 ID=cds3548;Parent=gene3593;Dbxref=Genbank:WP_025246348.1;Name=WP_025246348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246348.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3522277 3523307 . + . ID=gene3594;Name=SOPEG_RS17645;end_range=3523307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17645;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3522277 3523307 . + 0 ID=cds3549;Parent=gene3594;end_range=3523307,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3523708 3526089 . + . ID=id516;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3523787 3524710 . + . ID=gene3595;Name=SOPEG_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17650;old_locus_tag=SOPEG_3266 NZ_CP006568.1 Protein Homology CDS 3523787 3524710 . + 0 ID=cds3550;Parent=gene3595;Dbxref=Genbank:WP_025246349.1;Name=WP_025246349.1;gbkey=CDS;product=transposase;protein_id=WP_025246349.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3524820 3526028 . + . ID=gene3596;Name=SOPEG_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17655;old_locus_tag=SOPEG_3267 NZ_CP006568.1 Protein Homology CDS 3524820 3526028 . + 0 ID=cds3551;Parent=gene3596;Dbxref=Genbank:WP_025244030.1;Name=WP_025244030.1;gbkey=CDS;product=transposase;protein_id=WP_025244030.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3526973 3529015 . + . ID=gene3597;Name=SOPEG_RS17660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17660;pseudo=true NZ_CP006568.1 Protein Homology CDS 3526973 3529015 . + 0 ID=cds3552;Parent=gene3597;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:3527438..3527440%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3527096 3531120 . + . ID=id517;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3529027 3529956 . + . ID=gene3598;Name=SOPEG_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17665;old_locus_tag=SOPEG_3270 NZ_CP006568.1 Protein Homology CDS 3529027 3529956 . + 0 ID=cds3553;Parent=gene3598;Dbxref=Genbank:WP_025246350.1;Name=WP_025246350.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_025246350.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3530138 3531061 . + . ID=gene3599;Name=SOPEG_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17670;old_locus_tag=SOPEG_3271 NZ_CP006568.1 Protein Homology CDS 3530138 3531061 . + 0 ID=cds3554;Parent=gene3599;Dbxref=Genbank:WP_025246351.1;Name=WP_025246351.1;gbkey=CDS;product=transposase;protein_id=WP_025246351.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3531105 3531677 . + . ID=gene3600;Name=SOPEG_RS17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17675;pseudo=true NZ_CP006568.1 Protein Homology CDS 3531105 3531677 . + 0 ID=cds3555;Parent=gene3600;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sulfate transporter;pseudo=true;transl_except=(pos:3531420..3531422%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3531422 3531890 . + . ID=id518;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 3531893 3535783 . + . ID=id519;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3532059 3533534 . + . ID=gene3601;Name=SOPEG_RS17680;end_range=3533534,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17680;old_locus_tag=SOPEG_3273;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3532059 3533534 . + 0 ID=cds3556;Parent=gene3601;end_range=3533534,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3533621 3534370 . + . ID=gene3602;Name=SOPEG_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17685;old_locus_tag=SOPEG_3274 NZ_CP006568.1 Protein Homology CDS 3533621 3534370 . + 0 ID=cds3557;Parent=gene3602;Dbxref=Genbank:WP_025246354.1;Name=WP_025246354.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246354.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3534326 3535708 . - . ID=gene3603;Name=SOPEG_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17690 NZ_CP006568.1 Protein Homology CDS 3534326 3535708 . - 0 ID=cds3558;Parent=gene3603;Dbxref=Genbank:WP_025246355.1;Name=WP_025246355.1;gbkey=CDS;product=transposase;protein_id=WP_025246355.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3535818 3536225 . - . ID=gene3604;Name=SOPEG_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17695;old_locus_tag=SOPEG_3276 NZ_CP006568.1 Protein Homology CDS 3535818 3536225 . - 0 ID=cds3559;Parent=gene3604;Dbxref=Genbank:WP_025246356.1;Name=WP_025246356.1;gbkey=CDS;product=antitoxin;protein_id=WP_025246356.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3536319 3537381 . + . ID=id520;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3536380 3537303 . - . ID=gene3605;Name=SOPEG_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17700;old_locus_tag=SOPEG_3278 NZ_CP006568.1 Protein Homology CDS 3536380 3537303 . - 0 ID=cds3560;Parent=gene3605;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3537880 3538248 . - . ID=gene3606;Name=SOPEG_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23320;old_locus_tag=SOPEG_ps3279 NZ_CP006568.1 Protein Homology CDS 3537880 3538248 . - 0 ID=cds3561;Parent=gene3606;Dbxref=Genbank:WP_051419889.1;Name=WP_051419889.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419889.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3538297 3539341 . + . ID=id521;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3538357 3539280 . - . ID=gene3607;Name=SOPEG_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17710;old_locus_tag=SOPEG_3280 NZ_CP006568.1 Protein Homology CDS 3538357 3539280 . - 0 ID=cds3562;Parent=gene3607;Dbxref=Genbank:WP_025246357.1;Name=WP_025246357.1;gbkey=CDS;product=transposase;protein_id=WP_025246357.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3539573 3540634 . + . ID=id522;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3539630 3540555 . - . ID=gene3608;Name=SOPEG_RS17715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17715;pseudo=true NZ_CP006568.1 Protein Homology CDS 3539630 3540555 . - 0 ID=cds3563;Parent=gene3608;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3540882 3541948 . + . ID=id523;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3540942 3541865 . - . ID=gene3609;Name=SOPEG_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17720;old_locus_tag=SOPEG_3282 NZ_CP006568.1 Protein Homology CDS 3540942 3541865 . - 0 ID=cds3564;Parent=gene3609;Dbxref=Genbank:WP_025246358.1;Name=WP_025246358.1;gbkey=CDS;product=transposase;protein_id=WP_025246358.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3542074 3549871 . + . ID=id524;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3542232 3543005 . - . ID=gene3610;Name=SOPEG_RS17725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17725;pseudo=true NZ_CP006568.1 Protein Homology CDS 3542232 3543005 . - 0 ID=cds3565;Parent=gene3610;exception=annotated by transcript or proteomic data;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3543350 3543938 . - . ID=gene3611;Name=SOPEG_RS17730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17730;pseudo=true NZ_CP006568.1 Protein Homology CDS 3543350 3543938 . - 0 ID=cds3566;Parent=gene3611;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ACP phosphodiesterase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3544043 3545108 . + . ID=gene3612;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=SOPEG_RS17735;pseudo=true NZ_CP006568.1 Protein Homology CDS 3544043 3545108 . + 0 ID=cds3567;Parent=gene3612;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3545299 3546438 . + . ID=gene3613;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=SOPEG_RS17740;pseudo=true NZ_CP006568.1 Protein Homology CDS 3545299 3546438 . + 0 ID=cds3568;Parent=gene3613;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;pseudo=true;transl_except=(pos:3545857..3545859%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3546439 3546771 . + . ID=gene3614;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SOPEG_RS17745;old_locus_tag=SOPEG_3287 NZ_CP006568.1 Protein Homology CDS 3546439 3546771 . + 0 ID=cds3569;Parent=gene3614;Dbxref=Genbank:WP_025246359.1;Name=WP_025246359.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_025246359.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3546833 3547144 . + . ID=gene3615;Name=SOPEG_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17750 NZ_CP006568.1 GeneMarkS+ CDS 3546833 3547144 . + 0 ID=cds3570;Parent=gene3615;Dbxref=Genbank:WP_038469005.1;Name=WP_038469005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469005.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3547156 3548643 . + . ID=gene3616;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=SOPEG_RS17755 NZ_CP006568.1 Protein Homology CDS 3547156 3548643 . + 0 ID=cds3571;Parent=gene3616;Dbxref=Genbank:WP_038469008.1;Name=WP_038469008.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_038469008.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3548713 3549623 . + . ID=gene3617;Name=SOPEG_RS17760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17760;pseudo=true NZ_CP006568.1 Protein Homology CDS 3548713 3549623 . + 0 ID=cds3572;Parent=gene3617;exception=annotated by transcript or proteomic data;gbkey=CDS;product=preprotein translocase subunit SecF;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3550042 3551007 . - . ID=gene3618;Name=SOPEG_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17765 NZ_CP006568.1 Protein Homology CDS 3550042 3551007 . - 0 ID=cds3573;Parent=gene3618;Dbxref=Genbank:WP_051419891.1;Name=WP_051419891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419891.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3551043 3551193 . + . ID=id525;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 3551428 3553581 . + . ID=id526;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3551507 3552334 . + . ID=gene3619;Name=SOPEG_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17770 NZ_CP006568.1 Protein Homology CDS 3551507 3552334 . + 0 ID=cds3574;Parent=gene3619;Dbxref=Genbank:WP_025246361.1;Name=WP_025246361.1;gbkey=CDS;product=transposase;protein_id=WP_025246361.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3552382 3553305 . + . ID=gene3620;Name=SOPEG_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17775;old_locus_tag=SOPEG_3292 NZ_CP006568.1 Protein Homology CDS 3552382 3553305 . + 0 ID=cds3575;Parent=gene3620;Dbxref=Genbank:WP_025246362.1;Name=WP_025246362.1;gbkey=CDS;product=transposase;protein_id=WP_025246362.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3553675 3553926 . - . ID=gene3621;Name=SOPEG_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17785 NZ_CP006568.1 GeneMarkS+ CDS 3553675 3553926 . - 0 ID=cds3576;Parent=gene3621;Dbxref=Genbank:WP_025246363.1;Name=WP_025246363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246363.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3553958 3554668 . - . ID=gene3622;Name=SOPEG_RS17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17790;pseudo=true NZ_CP006568.1 Protein Homology CDS 3553958 3554668 . - 0 ID=cds3577;Parent=gene3622;gbkey=CDS;product=DNA-binding protein;pseudo=true;transl_except=(pos:complement(3554144..3554146)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3554667 3556814 . + . ID=id527;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3554799 3555020 . - . ID=gene3623;Name=SOPEG_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17795 NZ_CP006568.1 Protein Homology CDS 3554799 3555020 . - 0 ID=cds3578;Parent=gene3623;Dbxref=Genbank:WP_051419893.1;Name=WP_051419893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419893.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3555047 3555970 . + . ID=gene3624;Name=SOPEG_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17800;old_locus_tag=SOPEG_3296 NZ_CP006568.1 Protein Homology CDS 3555047 3555970 . + 0 ID=cds3579;Parent=gene3624;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3556016 3556576 . - . ID=gene3625;Name=SOPEG_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23325 NZ_CP006568.1 Protein Homology CDS 3556016 3556576 . - 0 ID=cds3580;Parent=gene3625;Dbxref=Genbank:WP_051419894.1;Name=WP_051419894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419894.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3556886 3557658 . - . ID=gene3626;Name=SOPEG_RS17810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17810;pseudo=true NZ_CP006568.1 Protein Homology CDS 3556886 3557658 . - 0 ID=cds3581;Parent=gene3626;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Rha family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3557976 3558380 . + . ID=gene3627;Name=SOPEG_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17815;old_locus_tag=SOPEG_3298 NZ_CP006568.1 Protein Homology CDS 3557976 3558380 . + 0 ID=cds3582;Parent=gene3627;Dbxref=Genbank:WP_025246364.1;Name=WP_025246364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246364.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3558253 3558355 . + . ID=id528;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 3558377 3562217 . + . ID=id529;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3558453 3559640 . + . ID=gene3628;Name=SOPEG_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17820 NZ_CP006568.1 Protein Homology CDS 3558453 3559640 . + 0 ID=cds3583;Parent=gene3628;Dbxref=Genbank:WP_038469013.1;Name=WP_038469013.1;gbkey=CDS;product=transposase;protein_id=WP_038469013.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3559784 3560532 . - . ID=gene3629;Name=SOPEG_RS17825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17825;pseudo=true NZ_CP006568.1 Protein Homology CDS 3559784 3560532 . - 0 ID=cds3584;Parent=gene3629;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3560544 3561479 . - . ID=gene3630;Name=SOPEG_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23330 NZ_CP006568.1 Protein Homology CDS 3560544 3561479 . - 0 ID=cds3585;Parent=gene3630;Dbxref=Genbank:WP_051419897.1;Name=WP_051419897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419897.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3561458 3562060 . - . ID=gene3631;Name=SOPEG_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17830 NZ_CP006568.1 Protein Homology CDS 3561458 3562060 . - 0 ID=cds3586;Parent=gene3631;Dbxref=Genbank:WP_051419898.1;Name=WP_051419898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419898.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3562294 3564332 . + . ID=id530;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3562355 3563278 . - . ID=gene3632;Name=SOPEG_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17835;old_locus_tag=SOPEG_3302 NZ_CP006568.1 Protein Homology CDS 3562355 3563278 . - 0 ID=cds3587;Parent=gene3632;Dbxref=Genbank:WP_025246366.1;Name=WP_025246366.1;gbkey=CDS;product=transposase;protein_id=WP_025246366.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3563467 3564225 . + . ID=gene3633;Name=SOPEG_RS17840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17840;pseudo=true NZ_CP006568.1 Protein Homology CDS 3563467 3564225 . + 0 ID=cds3588;Parent=gene3633;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3563827..3563829%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3564643 3565851 . + . ID=gene3634;Name=SOPEG_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17845 NZ_CP006568.1 Protein Homology CDS 3564643 3565851 . + 0 ID=cds3589;Parent=gene3634;Dbxref=Genbank:WP_051419899.1;Name=WP_051419899.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419899.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3565869 3566633 . + . ID=gene3635;Name=SOPEG_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23335 NZ_CP006568.1 Protein Homology CDS 3565869 3566633 . + 0 ID=cds3590;Parent=gene3635;Dbxref=Genbank:WP_025246368.1;Name=WP_025246368.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246368.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3566741 3567217 . + . ID=gene3636;Name=SOPEG_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23340 NZ_CP006568.1 Protein Homology CDS 3566741 3567217 . + 0 ID=cds3591;Parent=gene3636;Dbxref=Genbank:WP_025246369.1;Name=WP_025246369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246369.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3567181 3567798 . + . ID=gene3637;Name=SOPEG_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23345 NZ_CP006568.1 Protein Homology CDS 3567181 3567798 . + 0 ID=cds3592;Parent=gene3637;Dbxref=Genbank:WP_025246370.1;Name=WP_025246370.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246370.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3567802 3568789 . + . ID=gene3638;Name=SOPEG_RS17855;end_range=3568789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17855;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3567802 3568789 . + 0 ID=cds3593;Parent=gene3638;end_range=3568789,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3568902 3569924 . + . ID=gene3639;Name=SOPEG_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17860;old_locus_tag=SOPEG_3307 NZ_CP006568.1 Protein Homology CDS 3568902 3569924 . + 0 ID=cds3594;Parent=gene3639;Dbxref=Genbank:WP_025246371.1;Name=WP_025246371.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246371.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3570464 3570826 . + . ID=gene3640;Name=SOPEG_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17865 NZ_CP006568.1 GeneMarkS+ CDS 3570464 3570826 . + 0 ID=cds3595;Parent=gene3640;Dbxref=Genbank:WP_038469017.1;Name=WP_038469017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469017.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3571464 3572327 . - . ID=gene3641;Name=SOPEG_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17870;old_locus_tag=SOPEG_3309 NZ_CP006568.1 Protein Homology CDS 3571464 3572327 . - 0 ID=cds3596;Parent=gene3641;Dbxref=Genbank:WP_025246373.1;Name=WP_025246373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246373.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3572454 3573173 . + . ID=gene3642;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=SOPEG_RS17875;old_locus_tag=SOPEG_3310 NZ_CP006568.1 Protein Homology CDS 3572454 3573173 . + 0 ID=cds3597;Parent=gene3642;Dbxref=Genbank:WP_025246374.1;Name=WP_025246374.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_025246374.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3574138 3574521 . - . ID=gene3643;Name=SOPEG_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17880 NZ_CP006568.1 GeneMarkS+ CDS 3574138 3574521 . - 0 ID=cds3598;Parent=gene3643;Dbxref=Genbank:WP_025246375.1;Name=WP_025246375.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246375.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3575019 3576347 . + . ID=id531;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3575064 3576272 . - . ID=gene3644;Name=SOPEG_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17885;old_locus_tag=SOPEG_3312 NZ_CP006568.1 Protein Homology CDS 3575064 3576272 . - 0 ID=cds3599;Parent=gene3644;Dbxref=Genbank:WP_025244301.1;Name=WP_025244301.1;gbkey=CDS;product=transposase;protein_id=WP_025244301.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3576359 3578794 . + . ID=id532;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3576378 3576872 . - . ID=gene3645;Name=SOPEG_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17890 NZ_CP006568.1 Protein Homology CDS 3576378 3576872 . - 0 ID=cds3600;Parent=gene3645;Dbxref=Genbank:WP_051419900.1;Name=WP_051419900.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419900.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3576895 3577128 . - . ID=gene3646;Name=SOPEG_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23350 NZ_CP006568.1 Protein Homology CDS 3576895 3577128 . - 0 ID=cds3601;Parent=gene3646;Dbxref=Genbank:WP_051419901.1;Name=WP_051419901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419901.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3577140 3578657 . - . ID=gene3647;Name=SOPEG_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17895;old_locus_tag=SOPEG_3314 NZ_CP006568.1 Protein Homology CDS 3577140 3578657 . - 0 ID=cds3602;Parent=gene3647;Dbxref=Genbank:WP_038469021.1;Name=WP_038469021.1;gbkey=CDS;product=transposase;protein_id=WP_038469021.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3579062 3580125 . + . ID=id533;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3579142 3580065 . + . ID=gene3648;Name=SOPEG_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17900;old_locus_tag=SOPEG_3315 NZ_CP006568.1 Protein Homology CDS 3579142 3580065 . + 0 ID=cds3603;Parent=gene3648;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3580160 3580669 . + . ID=gene3649;Name=SOPEG_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17905 NZ_CP006568.1 Protein Homology CDS 3580160 3580669 . + 0 ID=cds3604;Parent=gene3649;Dbxref=Genbank:WP_025246378.1;Name=WP_025246378.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246378.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3580675 3581740 . + . ID=id534;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3580736 3581659 . - . ID=gene3650;Name=SOPEG_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17910;old_locus_tag=SOPEG_3317 NZ_CP006568.1 Protein Homology CDS 3580736 3581659 . - 0 ID=cds3605;Parent=gene3650;Dbxref=Genbank:WP_025246379.1;Name=WP_025246379.1;gbkey=CDS;product=transposase;protein_id=WP_025246379.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3582241 3582616 . + . ID=gene3651;Name=SOPEG_RS17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17915;pseudo=true NZ_CP006568.1 Protein Homology CDS 3582241 3582616 . + 0 ID=cds3606;Parent=gene3651;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3582804 3583796 . + . ID=gene3652;Name=SOPEG_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17920 NZ_CP006568.1 Protein Homology CDS 3582804 3583796 . + 0 ID=cds3607;Parent=gene3652;Dbxref=Genbank:WP_025246380.1;Name=WP_025246380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246380.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3583842 3584510 . - . ID=gene3653;Name=SOPEG_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17925 NZ_CP006568.1 Protein Homology CDS 3583842 3584510 . - 0 ID=cds3608;Parent=gene3653;Dbxref=Genbank:WP_051419902.1;Name=WP_051419902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419902.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3585243 3585566 . + . ID=gene3654;Name=SOPEG_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17930 NZ_CP006568.1 Protein Homology CDS 3585243 3585566 . + 0 ID=cds3609;Parent=gene3654;Dbxref=Genbank:WP_025246381.1;Name=WP_025246381.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246381.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3585617 3586680 . + . ID=id535;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3585697 3586620 . + . ID=gene3655;Name=SOPEG_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17935;old_locus_tag=SOPEG_3322 NZ_CP006568.1 Protein Homology CDS 3585697 3586620 . + 0 ID=cds3610;Parent=gene3655;Dbxref=Genbank:WP_025244160.1;Name=WP_025244160.1;gbkey=CDS;product=transposase;protein_id=WP_025244160.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3586676 3588442 . + . ID=gene3656;Name=SOPEG_RS17940;end_range=3588442,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17940;partial=true;pseudo=true;start_range=.,3586676 NZ_CP006568.1 Protein Homology CDS 3586676 3588442 . + 0 ID=cds3611;Parent=gene3656;end_range=3588442,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=CbbBc protein;pseudo=true;start_range=.,3586676;transl_table=11 NZ_CP006568.1 RefSeq gene 3588504 3589073 . + . ID=gene3657;Name=SOPEG_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17945;old_locus_tag=SOPEG_3324 NZ_CP006568.1 Protein Homology CDS 3588504 3589073 . + 0 ID=cds3612;Parent=gene3657;Dbxref=Genbank:WP_025246382.1;Name=WP_025246382.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025246382.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3589070 3589585 . + . ID=gene3658;Name=SOPEG_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17950;old_locus_tag=SOPEG_3325 NZ_CP006568.1 Protein Homology CDS 3589070 3589585 . + 0 ID=cds3613;Parent=gene3658;Dbxref=Genbank:WP_025246383.1;Name=WP_025246383.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_025246383.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3589927 3590214 . + . ID=gene3659;Name=SOPEG_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23355 NZ_CP006568.1 GeneMarkS+ CDS 3589927 3590214 . + 0 ID=cds3614;Parent=gene3659;Dbxref=Genbank:WP_051419903.1;Name=WP_051419903.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419903.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3590251 3591198 . + . ID=gene3660;Name=SOPEG_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23360 NZ_CP006568.1 Protein Homology CDS 3590251 3591198 . + 0 ID=cds3615;Parent=gene3660;Dbxref=Genbank:WP_051419904.1;Name=WP_051419904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3591180 3591422 . + . ID=gene3661;Name=SOPEG_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23365 NZ_CP006568.1 GeneMarkS+ CDS 3591180 3591422 . + 0 ID=cds3616;Parent=gene3661;Dbxref=Genbank:WP_051419905.1;Name=WP_051419905.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419905.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3591832 3592317 . + . ID=gene3662;Name=SOPEG_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17960 NZ_CP006568.1 Protein Homology CDS 3591832 3592317 . + 0 ID=cds3617;Parent=gene3662;Dbxref=Genbank:WP_051419906.1;Name=WP_051419906.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419906.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3592665 3593648 . - . ID=gene3663;Name=SOPEG_RS17965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17965;partial=true;pseudo=true;start_range=.,3592665 NZ_CP006568.1 Protein Homology CDS 3592665 3593648 . - 0 ID=cds3618;Parent=gene3663;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3592665;transl_table=11 NZ_CP006568.1 RefSeq gene 3593778 3595514 . - . ID=gene3664;Name=SOPEG_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17970 NZ_CP006568.1 Protein Homology CDS 3593778 3595514 . - 0 ID=cds3619;Parent=gene3664;Dbxref=Genbank:WP_025246385.1;Name=WP_025246385.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246385.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3595723 3596631 . - . ID=gene3665;Name=SOPEG_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17975 NZ_CP006568.1 Protein Homology CDS 3595723 3596631 . - 0 ID=cds3620;Parent=gene3665;Dbxref=Genbank:WP_051419907.1;Name=WP_051419907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419907.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3596920 3597981 . - . ID=gene3666;Name=SOPEG_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS17980 NZ_CP006568.1 Protein Homology CDS 3596920 3597981 . - 0 ID=cds3621;Parent=gene3666;Dbxref=Genbank:WP_051419908.1;Name=WP_051419908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419908.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3598400 3599318 . - . ID=gene3667;Name=SOPEG_RS17985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17985;pseudo=true NZ_CP006568.1 Protein Homology CDS 3598400 3599318 . - 0 ID=cds3622;Parent=gene3667;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(3598968..3598970)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3599311 3599886 . - . ID=gene3668;Name=SOPEG_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23370 NZ_CP006568.1 Protein Homology CDS 3599311 3599886 . - 0 ID=cds3623;Parent=gene3668;Dbxref=Genbank:WP_051419909.1;Name=WP_051419909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419909.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3599823 3600278 . - . ID=gene3669;Name=SOPEG_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23375 NZ_CP006568.1 Protein Homology CDS 3599823 3600278 . - 0 ID=cds3624;Parent=gene3669;Dbxref=Genbank:WP_051419910.1;Name=WP_051419910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419910.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3600275 3601190 . - . ID=gene3670;Name=SOPEG_RS17995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS17995;pseudo=true NZ_CP006568.1 Protein Homology CDS 3600275 3601190 . - 0 ID=cds3625;Parent=gene3670;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3601190 3602126 . - . ID=gene3671;Name=SOPEG_RS18000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18000;pseudo=true NZ_CP006568.1 Protein Homology CDS 3601190 3602126 . - 0 ID=cds3626;Parent=gene3671;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3602479 3602808 . - . ID=gene3672;Name=SOPEG_RS18005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18005;partial=true;pseudo=true;start_range=.,3602479 NZ_CP006568.1 Protein Homology CDS 3602479 3602808 . - 0 ID=cds3627;Parent=gene3672;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=lactoylglutathione lyase;pseudo=true;start_range=.,3602479;transl_table=11 NZ_CP006568.1 RefSeq gene 3604340 3604765 . + . ID=gene3673;Name=SOPEG_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18010;old_locus_tag=SOPEG_3336 NZ_CP006568.1 Protein Homology CDS 3604340 3604765 . + 0 ID=cds3628;Parent=gene3673;Dbxref=Genbank:WP_025246387.1;Name=WP_025246387.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_025246387.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3605149 3605772 . + . ID=gene3674;Name=SOPEG_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18015;old_locus_tag=SOPEG_3337 NZ_CP006568.1 Protein Homology CDS 3605149 3605772 . + 0 ID=cds3629;Parent=gene3674;Dbxref=Genbank:WP_025246388.1;Name=WP_025246388.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_025246388.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3605827 3606102 . + . ID=gene3675;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SOPEG_RS18020;old_locus_tag=SOPEG_3338 NZ_CP006568.1 Protein Homology CDS 3605827 3606102 . + 0 ID=cds3630;Parent=gene3675;Dbxref=Genbank:WP_025246389.1;Name=WP_025246389.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_025246389.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3606123 3608228 . + . ID=gene3676;Name=SOPEG_RS18025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18025;pseudo=true NZ_CP006568.1 Protein Homology CDS 3606123 3608228 . + 0 ID=cds3631;Parent=gene3676;gbkey=CDS;product=(p)ppGpp synthetase;pseudo=true;transl_except=(pos:3607986..3607988%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3608451 3610527 . + . ID=gene3677;Name=SOPEG_RS18030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18030;pseudo=true NZ_CP006568.1 Protein Homology CDS 3608451 3610527 . + 0 ID=cds3632;Parent=gene3677;Note=catalyzes branch migration in Holliday junction intermediates;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3610843 3612228 . + . ID=gene3678;Name=SOPEG_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18035;old_locus_tag=SOPEG_3341 NZ_CP006568.1 Protein Homology CDS 3610843 3612228 . + 0 ID=cds3633;Parent=gene3678;Dbxref=Genbank:WP_038469029.1;Name=WP_038469029.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease XanP;protein_id=WP_038469029.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3612368 3614059 . + . ID=gene3679;Name=SOPEG_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18040;old_locus_tag=SOPEG_3342 NZ_CP006568.1 Protein Homology CDS 3612368 3614059 . + 0 ID=cds3634;Parent=gene3679;Dbxref=Genbank:WP_025246391.1;Name=WP_025246391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246391.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3614112 3615053 . - . ID=gene3680;Name=SOPEG_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18045;old_locus_tag=SOPEG_3343 NZ_CP006568.1 Protein Homology CDS 3614112 3615053 . - 0 ID=cds3635;Parent=gene3680;Dbxref=Genbank:WP_025246392.1;Name=WP_025246392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246392.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3615090 3615473 . - . ID=gene3681;Name=SOPEG_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18050;old_locus_tag=SOPEG_3344 NZ_CP006568.1 Protein Homology CDS 3615090 3615473 . - 0 ID=cds3636;Parent=gene3681;Dbxref=Genbank:WP_025246393.1;Name=WP_025246393.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=WP_025246393.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3615427 3616329 . - . ID=gene3682;Name=SOPEG_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18055;old_locus_tag=SOPEG_3345 NZ_CP006568.1 Protein Homology CDS 3615427 3616329 . - 0 ID=cds3637;Parent=gene3682;Dbxref=Genbank:WP_025246394.1;Name=WP_025246394.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246394.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3616385 3616972 . - . ID=gene3683;Name=SOPEG_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18060;old_locus_tag=SOPEG_3346 NZ_CP006568.1 Protein Homology CDS 3616385 3616972 . - 0 ID=cds3638;Parent=gene3683;Dbxref=Genbank:WP_025246395.1;Name=WP_025246395.1;gbkey=CDS;product=alpha-D-glucose-1-phosphatase;protein_id=WP_025246395.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3617250 3618557 . - . ID=gene3684;Name=SOPEG_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18065;old_locus_tag=SOPEG_3347 NZ_CP006568.1 Protein Homology CDS 3617250 3618557 . - 0 ID=cds3639;Parent=gene3684;Dbxref=Genbank:WP_025246396.1;Name=WP_025246396.1;gbkey=CDS;product=sugar:proton symporter;protein_id=WP_025246396.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3618604 3618789 . - . ID=gene3685;Name=SOPEG_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18070 NZ_CP006568.1 GeneMarkS+ CDS 3618604 3618789 . - 0 ID=cds3640;Parent=gene3685;Dbxref=Genbank:WP_025246397.1;Name=WP_025246397.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246397.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3619192 3619965 . + . ID=gene3686;Name=SOPEG_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18075;old_locus_tag=SOPEG_3348 NZ_CP006568.1 Protein Homology CDS 3619192 3619965 . + 0 ID=cds3641;Parent=gene3686;Dbxref=Genbank:WP_025246398.1;Name=WP_025246398.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246398.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3620108 3621919 . - . ID=gene3687;Name=SOPEG_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18080;old_locus_tag=SOPEG_3349 NZ_CP006568.1 Protein Homology CDS 3620108 3621919 . - 0 ID=cds3642;Parent=gene3687;Dbxref=Genbank:WP_025246399.1;Name=WP_025246399.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_025246399.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3622208 3623272 . + . ID=id536;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3622288 3623211 . + . ID=gene3688;Name=SOPEG_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18085;old_locus_tag=SOPEG_3350 NZ_CP006568.1 Protein Homology CDS 3622288 3623211 . + 0 ID=cds3643;Parent=gene3688;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3623352 3624770 . + . ID=gene3689;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SOPEG_RS18090;old_locus_tag=SOPEG_3351 NZ_CP006568.1 Protein Homology CDS 3623352 3624770 . + 0 ID=cds3644;Parent=gene3689;Dbxref=Genbank:WP_025246400.1;Name=WP_025246400.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_025246400.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3624910 3625954 . + . ID=gene3690;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=pseudogene;locus_tag=SOPEG_RS18095;pseudo=true NZ_CP006568.1 Protein Homology CDS 3624910 3625954 . + 0 ID=cds3645;Parent=gene3690;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=glnL;product=nitrogen regulation protein NR(II);pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3625963 3627372 . + . ID=gene3691;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=SOPEG_RS18100;old_locus_tag=SOPEG_3353 NZ_CP006568.1 Protein Homology CDS 3625963 3627372 . + 0 ID=cds3646;Parent=gene3691;Dbxref=Genbank:WP_025246401.1;Name=WP_025246401.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_025246401.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3627660 3629031 . - . ID=gene3692;Name=SOPEG_RS18105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18105;pseudo=true NZ_CP006568.1 Protein Homology CDS 3627660 3629031 . - 0 ID=cds3647;Parent=gene3692;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;exception=annotated by transcript or proteomic data;gbkey=CDS;product=coproporphyrinogen III oxidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3629258 3629746 . - . ID=gene3693;Name=SOPEG_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18110 NZ_CP006568.1 Protein Homology CDS 3629258 3629746 . - 0 ID=cds3648;Parent=gene3693;Dbxref=Genbank:WP_051419911.1;Name=WP_051419911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419911.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3629916 3630560 . + . ID=gene3694;Name=SOPEG_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18115;old_locus_tag=SOPEG_3357 NZ_CP006568.1 Protein Homology CDS 3629916 3630560 . + 0 ID=cds3649;Parent=gene3694;Dbxref=Genbank:WP_025246402.1;Name=WP_025246402.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_025246402.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3630962 3633748 . - . ID=gene3695;Name=SOPEG_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18120;old_locus_tag=SOPEG_3358 NZ_CP006568.1 Protein Homology CDS 3630962 3633748 . - 0 ID=cds3650;Parent=gene3695;Dbxref=Genbank:WP_025246403.1;Name=WP_025246403.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_025246403.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3634165 3634788 . - . ID=gene3696;Name=SOPEG_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18125;old_locus_tag=SOPEG_3359 NZ_CP006568.1 Protein Homology CDS 3634165 3634788 . - 0 ID=cds3651;Parent=gene3696;Dbxref=Genbank:WP_025246404.1;Name=WP_025246404.1;gbkey=CDS;product=protein disulfide isomerase;protein_id=WP_025246404.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3634832 3635817 . - . ID=gene3697;Name=SOPEG_RS18130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18130;pseudo=true NZ_CP006568.1 Protein Homology CDS 3634832 3635817 . - 0 ID=cds3652;Parent=gene3697;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;exception=annotated by transcript or proteomic data;gbkey=CDS;product=serine/threonine protein kinase;pseudo=true;transl_except=(pos:complement(3635446..3635448)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3635942 3636999 . + . ID=id537;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3636020 3636634 . + . ID=gene3698;Name=SOPEG_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18135 NZ_CP006568.1 Protein Homology CDS 3636020 3636634 . + 0 ID=cds3653;Parent=gene3698;Dbxref=Genbank:WP_025246405.1;Name=WP_025246405.1;gbkey=CDS;product=transposase;protein_id=WP_025246405.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3636799 3636939 . + . ID=gene3699;Name=SOPEG_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18140 NZ_CP006568.1 Protein Homology CDS 3636799 3636939 . + 0 ID=cds3654;Parent=gene3699;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3637299 3637814 . + . ID=gene3700;Name=SOPEG_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18145 NZ_CP006568.1 Protein Homology CDS 3637299 3637814 . + 0 ID=cds3655;Parent=gene3700;Dbxref=Genbank:WP_025246407.1;Name=WP_025246407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246407.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3637769 3640828 . + . ID=id538;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3637805 3638945 . - . ID=gene3701;Name=SOPEG_RS18150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18150;pseudo=true NZ_CP006568.1 Protein Homology CDS 3637805 3638945 . - 0 ID=cds3656;Parent=gene3701;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3639127 3640674 . - . ID=gene3702;Name=SOPEG_RS18155;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS18155;old_locus_tag=SOPEG_r3365 NZ_CP006568.1 RefSeq rRNA 3639127 3640674 . - . ID=rna45;Parent=gene3702;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq exon 3639127 3640674 . - . ID=id539;Parent=rna45;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq gene 3641004 3641576 . - . ID=gene3703;Name=SOPEG_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18160;old_locus_tag=SOPEG_3366 NZ_CP006568.1 Protein Homology CDS 3641004 3641576 . - 0 ID=cds3657;Parent=gene3703;Dbxref=Genbank:WP_025246409.1;Name=WP_025246409.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=WP_025246409.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3641766 3642797 . + . ID=gene3704;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=SOPEG_RS18165;old_locus_tag=SOPEG_3367 NZ_CP006568.1 Protein Homology CDS 3641766 3642797 . + 0 ID=cds3658;Parent=gene3704;Dbxref=Genbank:WP_025246410.1;Name=WP_025246410.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_025246410.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3642790 3643443 . + . ID=gene3705;Name=SOPEG_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18170;old_locus_tag=SOPEG_3368 NZ_CP006568.1 Protein Homology CDS 3642790 3643443 . + 0 ID=cds3659;Parent=gene3705;Dbxref=Genbank:WP_025246411.1;Name=WP_025246411.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter permease;protein_id=WP_025246411.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3643508 3644323 . + . ID=gene3706;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=SOPEG_RS18175;old_locus_tag=SOPEG_3369 NZ_CP006568.1 Protein Homology CDS 3643508 3644323 . + 0 ID=cds3660;Parent=gene3706;Dbxref=Genbank:WP_025246412.1;Name=WP_025246412.1;gbkey=CDS;gene=metQ;product=methionine ABC transporter substrate-binding protein;protein_id=WP_025246412.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3644439 3644852 . + . ID=gene3707;Name=SOPEG_RS18180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18180;pseudo=true NZ_CP006568.1 Protein Homology CDS 3644439 3644852 . + 0 ID=cds3661;Parent=gene3707;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3644529..3644531%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3644849 3645606 . + . ID=gene3708;Name=SOPEG_RS18185;end_range=3645606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18185;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3644849 3645606 . + 0 ID=cds3662;Parent=gene3708;end_range=3645606,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3645804 3647528 . + . ID=gene3709;Name=SOPEG_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18190;old_locus_tag=SOPEG_3372 NZ_CP006568.1 Protein Homology CDS 3645804 3647528 . + 0 ID=cds3663;Parent=gene3709;Dbxref=Genbank:WP_025246413.1;Name=WP_025246413.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=prolyl-tRNA synthetase;protein_id=WP_025246413.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3647581 3652713 . + . ID=id540;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3647760 3649271 . + . ID=gene3710;Name=SOPEG_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18195;old_locus_tag=SOPEG_3373 NZ_CP006568.1 Protein Homology CDS 3647760 3649271 . + 0 ID=cds3664;Parent=gene3710;Dbxref=Genbank:WP_025246414.1;Name=WP_025246414.1;gbkey=CDS;product=transposase;protein_id=WP_025246414.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3649283 3650032 . + . ID=gene3711;Name=SOPEG_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18200;old_locus_tag=SOPEG_3374 NZ_CP006568.1 Protein Homology CDS 3649283 3650032 . + 0 ID=cds3665;Parent=gene3711;Dbxref=Genbank:WP_025246415.1;Name=WP_025246415.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246415.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3650131 3651339 . - . ID=gene3712;Name=SOPEG_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18205;old_locus_tag=SOPEG_3375 NZ_CP006568.1 Protein Homology CDS 3650131 3651339 . - 0 ID=cds3666;Parent=gene3712;Dbxref=Genbank:WP_025246416.1;Name=WP_025246416.1;gbkey=CDS;product=transposase;protein_id=WP_025246416.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3651419 3651727 . - . ID=gene3713;Name=SOPEG_RS18210;end_range=3651727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18210;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3651419 3651727 . - 0 ID=cds3667;Parent=gene3713;end_range=3651727,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3651706 3652629 . - . ID=gene3714;Name=SOPEG_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18215 NZ_CP006568.1 Protein Homology CDS 3651706 3652629 . - 0 ID=cds3668;Parent=gene3714;Dbxref=Genbank:WP_025246418.1;Name=WP_025246418.1;gbkey=CDS;product=transposase;protein_id=WP_025246418.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3652792 3654528 . - . ID=gene3715;Name=SOPEG_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18220 NZ_CP006568.1 GeneMarkS+ CDS 3652792 3654528 . - 0 ID=cds3669;Parent=gene3715;Dbxref=Genbank:WP_025246419.1;Name=WP_025246419.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246419.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3654539 3655621 . + . ID=id541;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3654619 3655560 . + . ID=gene3716;Name=SOPEG_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18225;old_locus_tag=SOPEG_3378 NZ_CP006568.1 Protein Homology CDS 3654619 3655560 . + 0 ID=cds3670;Parent=gene3716;Dbxref=Genbank:WP_025246420.1;Name=WP_025246420.1;gbkey=CDS;product=transposase;protein_id=WP_025246420.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3655698 3655949 . + . ID=gene3717;Name=SOPEG_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18230 NZ_CP006568.1 Protein Homology CDS 3655698 3655949 . + 0 ID=cds3671;Parent=gene3717;Dbxref=Genbank:WP_038469034.1;Name=WP_038469034.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_038469034.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3655993 3657726 . - . ID=gene3718;Name=SOPEG_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18235;old_locus_tag=SOPEG_3380 NZ_CP006568.1 Protein Homology CDS 3655993 3657726 . - 0 ID=cds3672;Parent=gene3718;Dbxref=Genbank:WP_025246422.1;Name=WP_025246422.1;gbkey=CDS;product=tRNA(Ile)-lysidine synthetase;protein_id=WP_025246422.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3657731 3658105 . - . ID=gene3719;Name=SOPEG_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18240;old_locus_tag=SOPEG_3381 NZ_CP006568.1 Protein Homology CDS 3657731 3658105 . - 0 ID=cds3673;Parent=gene3719;Dbxref=Genbank:WP_038469039.1;Name=WP_038469039.1;gbkey=CDS;product=lyase;protein_id=WP_038469039.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3658254 3660386 . - . ID=gene3720;Name=SOPEG_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18245;old_locus_tag=SOPEG_3382 NZ_CP006568.1 Protein Homology CDS 3658254 3660386 . - 0 ID=cds3674;Parent=gene3720;Dbxref=Genbank:WP_025246423.1;Name=WP_025246423.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;product=lysine decarboxylase LdcC;protein_id=WP_025246423.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3660583 3661542 . - . ID=gene3721;Name=SOPEG_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18250;old_locus_tag=SOPEG_3383 NZ_CP006568.1 Protein Homology CDS 3660583 3661542 . - 0 ID=cds3675;Parent=gene3721;Dbxref=Genbank:WP_025246424.1;Name=WP_025246424.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase subunit alpha;protein_id=WP_025246424.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3661555 3665037 . - . ID=gene3722;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SOPEG_RS18255;old_locus_tag=SOPEG_3384 NZ_CP006568.1 Protein Homology CDS 3661555 3665037 . - 0 ID=cds3676;Parent=gene3722;Dbxref=Genbank:WP_025246425.1;Name=WP_025246425.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_025246425.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3665096 3665692 . - . ID=gene3723;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SOPEG_RS18260;old_locus_tag=SOPEG_3385 NZ_CP006568.1 Protein Homology CDS 3665096 3665692 . - 0 ID=cds3677;Parent=gene3723;Dbxref=Genbank:WP_025246426.1;Name=WP_025246426.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_025246426.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3665716 3666864 . - . ID=gene3724;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=SOPEG_RS18265;old_locus_tag=SOPEG_3386 NZ_CP006568.1 Protein Homology CDS 3665716 3666864 . - 0 ID=cds3678;Parent=gene3724;Dbxref=Genbank:WP_025246427.1;Name=WP_025246427.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_025246427.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3666867 3667655 . - . ID=gene3725;Name=SOPEG_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18270;old_locus_tag=SOPEG_3387 NZ_CP006568.1 Protein Homology CDS 3666867 3667655 . - 0 ID=cds3679;Parent=gene3725;Dbxref=Genbank:WP_025246428.1;Name=WP_025246428.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=UDP-N-acetylglucosamine acyltransferase;protein_id=WP_025246428.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3667660 3668115 . - . ID=gene3726;Name=SOPEG_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18275;old_locus_tag=SOPEG_3388 NZ_CP006568.1 Protein Homology CDS 3667660 3668115 . - 0 ID=cds3680;Parent=gene3726;Dbxref=Genbank:WP_025246429.1;Name=WP_025246429.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_025246429.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3668266 3669288 . - . ID=gene3727;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=SOPEG_RS18280;old_locus_tag=SOPEG_3389 NZ_CP006568.1 Protein Homology CDS 3668266 3669288 . - 0 ID=cds3681;Parent=gene3727;Dbxref=Genbank:WP_025246430.1;Name=WP_025246430.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase;protein_id=WP_025246430.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3669292 3669789 . - . ID=gene3728;Name=SOPEG_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18285;old_locus_tag=SOPEG_3390 NZ_CP006568.1 Protein Homology CDS 3669292 3669789 . - 0 ID=cds3682;Parent=gene3728;Dbxref=Genbank:WP_025246431.1;Name=WP_025246431.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_025246431.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3669932 3672358 . - . ID=gene3729;Name=SOPEG_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18290;old_locus_tag=SOPEG_3391 NZ_CP006568.1 Protein Homology CDS 3669932 3672358 . - 0 ID=cds3683;Parent=gene3729;Dbxref=Genbank:WP_025246432.1;Name=WP_025246432.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein biogenesis protein YaeT;protein_id=WP_025246432.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3672396 3673751 . - . ID=gene3730;Name=SOPEG_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18295;old_locus_tag=SOPEG_3392 NZ_CP006568.1 Protein Homology CDS 3672396 3673751 . - 0 ID=cds3684;Parent=gene3730;Dbxref=Genbank:WP_025246433.1;Name=WP_025246433.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=zinc metallopeptidase RseP;protein_id=WP_025246433.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3673771 3674625 . - . ID=gene3731;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SOPEG_RS18300;old_locus_tag=SOPEG_3393 NZ_CP006568.1 Protein Homology CDS 3673771 3674625 . - 0 ID=cds3685;Parent=gene3731;Dbxref=Genbank:WP_025246434.1;Name=WP_025246434.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthetase;protein_id=WP_025246434.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3674635 3675396 . - . ID=gene3732;Name=SOPEG_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18305;old_locus_tag=SOPEG_3394 NZ_CP006568.1 Protein Homology CDS 3674635 3675396 . - 0 ID=cds3686;Parent=gene3732;Dbxref=Genbank:WP_025246435.1;Name=WP_025246435.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=UDP pyrophosphate synthase;protein_id=WP_025246435.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3675548 3676789 . - . ID=gene3733;Name=SOPEG_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18310;old_locus_tag=SOPEG_3395 NZ_CP006568.1 Protein Homology CDS 3675548 3676789 . - 0 ID=cds3687;Parent=gene3733;Dbxref=Genbank:WP_025246436.1;Name=WP_025246436.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_025246436.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3676945 3677502 . - . ID=gene3734;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SOPEG_RS18315;old_locus_tag=SOPEG_3396 NZ_CP006568.1 Protein Homology CDS 3676945 3677502 . - 0 ID=cds3688;Parent=gene3734;Dbxref=Genbank:WP_025246437.1;Name=WP_025246437.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=WP_025246437.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3677571 3678296 . - . ID=gene3735;Name=SOPEG_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18320;old_locus_tag=SOPEG_3397 NZ_CP006568.1 Protein Homology CDS 3677571 3678296 . - 0 ID=cds3689;Parent=gene3735;Dbxref=Genbank:WP_025246438.1;Name=WP_025246438.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_025246438.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3678437 3679294 . - . ID=gene3736;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SOPEG_RS18325;old_locus_tag=SOPEG_3398 NZ_CP006568.1 Protein Homology CDS 3678437 3679294 . - 0 ID=cds3690;Parent=gene3736;Dbxref=Genbank:WP_025246439.1;Name=WP_025246439.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_025246439.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3679410 3680135 . - . ID=gene3737;Name=SOPEG_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18330;old_locus_tag=SOPEG_3399 NZ_CP006568.1 Protein Homology CDS 3679410 3680135 . - 0 ID=cds3691;Parent=gene3737;Dbxref=Genbank:WP_038469044.1;Name=WP_038469044.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_038469044.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3680474 3681268 . + . ID=gene3738;Name=SOPEG_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18335;old_locus_tag=SOPEG_3400 NZ_CP006568.1 Protein Homology CDS 3680474 3681268 . + 0 ID=cds3692;Parent=gene3738;Dbxref=Genbank:WP_025246441.1;Name=WP_025246441.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_025246441.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3681379 3683853 . + . ID=gene3739;Name=SOPEG_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18340 NZ_CP006568.1 Protein Homology CDS 3681379 3683853 . + 0 ID=cds3693;Parent=gene3739;Dbxref=Genbank:WP_025246442.1;Name=WP_025246442.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=(protein-PII) uridylyltransferase;protein_id=WP_025246442.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3683905 3684729 . + . ID=gene3740;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=SOPEG_RS18345;old_locus_tag=SOPEG_3402 NZ_CP006568.1 Protein Homology CDS 3683905 3684729 . + 0 ID=cds3694;Parent=gene3740;Dbxref=Genbank:WP_025246443.1;Name=WP_025246443.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=WP_025246443.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3684854 3685243 . + . ID=gene3741;Name=SOPEG_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18350;old_locus_tag=SOPEG_3403 NZ_CP006568.1 Protein Homology CDS 3684854 3685243 . + 0 ID=cds3695;Parent=gene3741;Dbxref=Genbank:WP_025246444.1;Name=WP_025246444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246444.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3685412 3685858 . - . ID=gene3742;Name=SOPEG_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18355;old_locus_tag=SOPEG_3404 NZ_CP006568.1 Protein Homology CDS 3685412 3685858 . - 0 ID=cds3696;Parent=gene3742;Dbxref=Genbank:WP_025246445.1;Name=WP_025246445.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_025246445.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3685881 3686666 . - . ID=gene3743;Name=SOPEG_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18360;old_locus_tag=SOPEG_3405 NZ_CP006568.1 Protein Homology CDS 3685881 3686666 . - 0 ID=cds3697;Parent=gene3743;Dbxref=Genbank:WP_025246446.1;Name=WP_025246446.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_025246446.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3686659 3686979 . - . ID=gene3744;Name=SOPEG_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18365;old_locus_tag=SOPEG_3406 NZ_CP006568.1 Protein Homology CDS 3686659 3686979 . - 0 ID=cds3698;Parent=gene3744;Dbxref=Genbank:WP_025246447.1;Name=WP_025246447.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246447.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3687885 3688382 . - . ID=gene3745;Name=SOPEG_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18370;old_locus_tag=SOPEG_3407 NZ_CP006568.1 Protein Homology CDS 3687885 3688382 . - 0 ID=cds3699;Parent=gene3745;Dbxref=Genbank:WP_051419912.1;Name=WP_051419912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419912.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3688443 3689237 . + . ID=gene3746;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=SOPEG_RS18375 NZ_CP006568.1 Protein Homology CDS 3688443 3689237 . + 0 ID=cds3700;Parent=gene3746;Dbxref=Genbank:WP_051419913.1;Name=WP_051419913.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=7-cyano-7-deazaguanine reductase;protein_id=WP_051419913.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3689486 3690850 . + . ID=gene3747;Name=SOPEG_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18380;old_locus_tag=SOPEG_3409 NZ_CP006568.1 Protein Homology CDS 3689486 3690850 . + 0 ID=cds3701;Parent=gene3747;Dbxref=Genbank:WP_025246448.1;Name=WP_025246448.1;gbkey=CDS;product=LOG family protein;protein_id=WP_025246448.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3690943 3691695 . + . ID=gene3748;Name=SOPEG_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18385;old_locus_tag=SOPEG_3410 NZ_CP006568.1 Protein Homology CDS 3690943 3691695 . + 0 ID=cds3702;Parent=gene3748;Dbxref=Genbank:WP_025246449.1;Name=WP_025246449.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease-like protein;protein_id=WP_025246449.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3691727 3692404 . - . ID=gene3749;Name=SOPEG_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23380;old_locus_tag=SOPEG_ps3411 NZ_CP006568.1 Protein Homology CDS 3691727 3692404 . - 0 ID=cds3703;Parent=gene3749;Dbxref=Genbank:WP_025246450.1;Name=WP_025246450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246450.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3692977 3693195 . + . ID=gene3750;Name=SOPEG_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23385 NZ_CP006568.1 GeneMarkS+ CDS 3692977 3693195 . + 0 ID=cds3704;Parent=gene3750;Dbxref=Genbank:WP_051419914.1;Name=WP_051419914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419914.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3693185 3694477 . + . ID=gene3751;Name=SOPEG_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18395 NZ_CP006568.1 Protein Homology CDS 3693185 3694477 . + 0 ID=cds3705;Parent=gene3751;Dbxref=Genbank:WP_051419915.1;Name=WP_051419915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419915.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3694566 3698343 . + . ID=id542;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3694615 3694833 . - . ID=gene3752;Name=SOPEG_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18400 NZ_CP006568.1 Protein Homology CDS 3694615 3694833 . - 0 ID=cds3706;Parent=gene3752;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3694762 3695744 . - . ID=gene3753;Name=SOPEG_RS18405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18405;partial=true;pseudo=true;start_range=.,3694762 NZ_CP006568.1 Protein Homology CDS 3694762 3695744 . - 0 ID=cds3707;Parent=gene3753;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3694762;transl_table=11 NZ_CP006568.1 RefSeq gene 3695932 3696681 . - . ID=gene3754;Name=SOPEG_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18410;old_locus_tag=SOPEG_3414 NZ_CP006568.1 Protein Homology CDS 3695932 3696681 . - 0 ID=cds3708;Parent=gene3754;Dbxref=Genbank:WP_025246452.1;Name=WP_025246452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246452.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3696693 3698243 . - . ID=gene3755;Name=SOPEG_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18415;old_locus_tag=SOPEG_3415 NZ_CP006568.1 Protein Homology CDS 3696693 3698243 . - 0 ID=cds3709;Parent=gene3755;Dbxref=Genbank:WP_025246453.1;Name=WP_025246453.1;gbkey=CDS;product=transposase;protein_id=WP_025246453.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3698389 3698640 . + . ID=gene3756;Name=SOPEG_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18420 NZ_CP006568.1 GeneMarkS+ CDS 3698389 3698640 . + 0 ID=cds3710;Parent=gene3756;Dbxref=Genbank:WP_025246454.1;Name=WP_025246454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246454.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3698743 3699844 . - . ID=gene3757;Name=SOPEG_RS18425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18425;pseudo=true NZ_CP006568.1 Protein Homology CDS 3698743 3699844 . - 0 ID=cds3711;Parent=gene3757;exception=annotated by transcript or proteomic data;gbkey=CDS;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3699870 3700952 . + . ID=id543;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3699951 3700892 . + . ID=gene3758;Name=SOPEG_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18430;old_locus_tag=SOPEG_3418 NZ_CP006568.1 Protein Homology CDS 3699951 3700892 . + 0 ID=cds3712;Parent=gene3758;Dbxref=Genbank:WP_025246455.1;Name=WP_025246455.1;gbkey=CDS;product=transposase;protein_id=WP_025246455.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3700934 3701314 . - . ID=gene3759;Name=SOPEG_RS18435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18435;pseudo=true NZ_CP006568.1 Protein Homology CDS 3700934 3701314 . - 0 ID=cds3713;Parent=gene3759;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3701111..3701113)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3701333 3702289 . - . ID=gene3760;Name=SOPEG_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18440;old_locus_tag=SOPEG_3419 NZ_CP006568.1 Protein Homology CDS 3701333 3702289 . - 0 ID=cds3714;Parent=gene3760;Dbxref=Genbank:WP_025246456.1;Name=WP_025246456.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246456.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3702835 3703056 . - . ID=gene3761;Name=SOPEG_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18445;old_locus_tag=SOPEG_3420 NZ_CP006568.1 Protein Homology CDS 3702835 3703056 . - 0 ID=cds3715;Parent=gene3761;Dbxref=Genbank:WP_025246457.1;Name=WP_025246457.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246457.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3703227 3704413 . + . ID=gene3762;Name=SOPEG_RS18450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18450;pseudo=true NZ_CP006568.1 Protein Homology CDS 3703227 3704413 . + 0 ID=cds3716;Parent=gene3762;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cysteine sulfinate desulfinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3704425 3704867 . + . ID=gene3763;Name=SOPEG_RS18455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18455;pseudo=true NZ_CP006568.1 Protein Homology CDS 3704425 3704867 . + 0 ID=cds3717;Parent=gene3763;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Fe-S metabolism protein SufE;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3705058 3705860 . - . ID=gene3764;Name=SOPEG_RS18460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18460;partial=true;pseudo=true;start_range=.,3705058 NZ_CP006568.1 Protein Homology CDS 3705058 3705860 . - 0 ID=cds3718;Parent=gene3764;Note=accepts sulfur from CsdA;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=sulfur acceptor protein CsdL;pseudo=true;start_range=.,3705058;transl_table=11 NZ_CP006568.1 RefSeq gene 3706076 3707171 . - . ID=gene3765;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=pseudogene;locus_tag=SOPEG_RS18465;partial=true;pseudo=true;start_range=.,3706076 NZ_CP006568.1 Protein Homology CDS 3706076 3707171 . - 0 ID=cds3719;Parent=gene3765;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=mltA;partial=true;product=murein transglycosylase;pseudo=true;start_range=.,3706076;transl_except=(pos:complement(3706482..3706484)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3707374 3707450 . + . ID=gene3766;Name=SOPEG_RS18470;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS18470;old_locus_tag=SOPEG_t3425 NZ_CP006568.1 tRNAscan-SE tRNA 3707374 3707450 . + . ID=rna46;Parent=gene3766;anticodon=(pos:3707408..3707410);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 tRNAscan-SE exon 3707374 3707450 . + . ID=id544;Parent=rna46;anticodon=(pos:3707408..3707410);gbkey=tRNA;product=tRNA-Met NZ_CP006568.1 RefSeq gene 3707690 3708328 . - . ID=gene3767;Name=SOPEG_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18475;old_locus_tag=SOPEG_3426 NZ_CP006568.1 Protein Homology CDS 3707690 3708328 . - 0 ID=cds3720;Parent=gene3767;Dbxref=Genbank:WP_025246458.1;Name=WP_025246458.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246458.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3708372 3709794 . + . ID=gene3768;Name=SOPEG_RS18480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18480;pseudo=true NZ_CP006568.1 Protein Homology CDS 3708372 3709794 . + 0 ID=cds3721;Parent=gene3768;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amidohydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3709787 3711472 . + . ID=gene3769;Name=SOPEG_RS18485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18485;pseudo=true NZ_CP006568.1 Protein Homology CDS 3709787 3711472 . + 0 ID=cds3722;Parent=gene3769;gbkey=CDS;product=aminopeptidase;pseudo=true;transl_except=(pos:3710924..3710926%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3711538 3712386 . + . ID=gene3770;Name=SOPEG_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18490;old_locus_tag=SOPEG_3429 NZ_CP006568.1 Protein Homology CDS 3711538 3712386 . + 0 ID=cds3723;Parent=gene3770;Dbxref=Genbank:WP_025246459.1;Name=WP_025246459.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_025246459.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3712525 3713784 . - . ID=gene3771;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=SOPEG_RS18495;old_locus_tag=SOPEG_3430 NZ_CP006568.1 Protein Homology CDS 3712525 3713784 . - 0 ID=cds3724;Parent=gene3771;Dbxref=Genbank:WP_025246460.1;Name=WP_025246460.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_025246460.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3714019 3715362 . + . ID=gene3772;Name=SOPEG_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18500;old_locus_tag=SOPEG_3431 NZ_CP006568.1 Protein Homology CDS 3714019 3715362 . + 0 ID=cds3725;Parent=gene3772;Dbxref=Genbank:WP_025246461.1;Name=WP_025246461.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=N-acetylglutamate synthase;protein_id=WP_025246461.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3715501 3717378 . - . ID=gene3773;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=SOPEG_RS18505;old_locus_tag=SOPEG_3432 NZ_CP006568.1 Protein Homology CDS 3715501 3717378 . - 0 ID=cds3726;Parent=gene3773;Dbxref=Genbank:WP_025246462.1;Name=WP_025246462.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_025246462.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3717395 3720955 . - . ID=gene3774;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=SOPEG_RS18510;old_locus_tag=SOPEG_3433 NZ_CP006568.1 Protein Homology CDS 3717395 3720955 . - 0 ID=cds3727;Parent=gene3774;Dbxref=Genbank:WP_025246463.1;Name=WP_025246463.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_025246463.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3720927 3723848 . - . ID=gene3775;Name=SOPEG_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18515;old_locus_tag=SOPEG_3434 NZ_CP006568.1 Protein Homology CDS 3720927 3723848 . - 0 ID=cds3728;Parent=gene3775;Dbxref=Genbank:WP_025246464.1;Name=WP_025246464.1;Note=degrades small peptides;gbkey=CDS;product=protease;protein_id=WP_025246464.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3723977 3727381 . - . ID=gene3776;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=SOPEG_RS18520;old_locus_tag=SOPEG_3435 NZ_CP006568.1 Protein Homology CDS 3723977 3727381 . - 0 ID=cds3729;Parent=gene3776;Dbxref=Genbank:WP_025246465.1;Name=WP_025246465.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_025246465.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3727841 3728368 . - . ID=gene3777;Name=SOPEG_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23390;old_locus_tag=SOPEG_ps3436 NZ_CP006568.1 Protein Homology CDS 3727841 3728368 . - 0 ID=cds3730;Parent=gene3777;Dbxref=Genbank:WP_025246466.1;Name=WP_025246466.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246466.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3728365 3728652 . - . ID=gene3778;Name=SOPEG_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18530 NZ_CP006568.1 Protein Homology CDS 3728365 3728652 . - 0 ID=cds3731;Parent=gene3778;Dbxref=Genbank:WP_051419916.1;Name=WP_051419916.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419916.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3728676 3729293 . - . ID=gene3779;Name=SOPEG_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18535 NZ_CP006568.1 Protein Homology CDS 3728676 3729293 . - 0 ID=cds3732;Parent=gene3779;Dbxref=Genbank:WP_025246468.1;Name=WP_025246468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246468.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3729680 3730474 . - . ID=gene3780;Name=SOPEG_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18540;old_locus_tag=SOPEG_3439 NZ_CP006568.1 Protein Homology CDS 3729680 3730474 . - 0 ID=cds3733;Parent=gene3780;Dbxref=Genbank:WP_025246469.1;Name=WP_025246469.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_025246469.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3730481 3731353 . - . ID=gene3781;Name=SOPEG_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18545;old_locus_tag=SOPEG_3440 NZ_CP006568.1 Protein Homology CDS 3730481 3731353 . - 0 ID=cds3734;Parent=gene3781;Dbxref=Genbank:WP_025246470.1;Name=WP_025246470.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_025246470.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3731529 3733775 . - . ID=gene3782;Name=SOPEG_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18550;old_locus_tag=SOPEG_3441 NZ_CP006568.1 Protein Homology CDS 3731529 3733775 . - 0 ID=cds3735;Parent=gene3782;Dbxref=Genbank:WP_025246471.1;Name=WP_025246471.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_025246471.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3733788 3734315 . - . ID=gene3783;Name=SOPEG_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18555;old_locus_tag=SOPEG_3442 NZ_CP006568.1 Protein Homology CDS 3733788 3734315 . - 0 ID=cds3736;Parent=gene3783;Dbxref=Genbank:WP_025246472.1;Name=WP_025246472.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_025246472.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3734725 3735788 . + . ID=id545;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3734785 3735708 . - . ID=gene3784;Name=SOPEG_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18560;old_locus_tag=SOPEG_3443 NZ_CP006568.1 Protein Homology CDS 3734785 3735708 . - 0 ID=cds3737;Parent=gene3784;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3735823 3737540 . + . ID=id546;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3735892 3737151 . + . ID=gene3785;Name=SOPEG_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18565;old_locus_tag=SOPEG_3444 NZ_CP006568.1 Protein Homology CDS 3735892 3737151 . + 0 ID=cds3738;Parent=gene3785;Dbxref=Genbank:WP_025246473.1;Name=WP_025246473.1;gbkey=CDS;product=transposase;protein_id=WP_025246473.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3737782 3738477 . + . ID=gene3786;Name=SOPEG_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18570;old_locus_tag=SOPEG_3445 NZ_CP006568.1 Protein Homology CDS 3737782 3738477 . + 0 ID=cds3739;Parent=gene3786;Dbxref=Genbank:WP_025246474.1;Name=WP_025246474.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_025246474.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3738555 3739286 . + . ID=gene3787;Name=SOPEG_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18575;old_locus_tag=SOPEG_3446 NZ_CP006568.1 Protein Homology CDS 3738555 3739286 . + 0 ID=cds3740;Parent=gene3787;Dbxref=Genbank:WP_025246475.1;Name=WP_025246475.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246475.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3739752 3740792 . + . ID=gene3788;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=SOPEG_RS18585;old_locus_tag=SOPEG_3448 NZ_CP006568.1 Protein Homology CDS 3739752 3740792 . + 0 ID=cds3741;Parent=gene3788;Dbxref=Genbank:WP_025246476.1;Name=WP_025246476.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo/keto reductase;protein_id=WP_025246476.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3741011 3742222 . - . ID=gene3789;Name=SOPEG_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18590;old_locus_tag=SOPEG_3449 NZ_CP006568.1 Protein Homology CDS 3741011 3742222 . - 0 ID=cds3742;Parent=gene3789;Dbxref=Genbank:WP_025246477.1;Name=WP_025246477.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_025246477.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3742222 3744152 . - . ID=gene3790;Name=SOPEG_RS18595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18595;pseudo=true NZ_CP006568.1 Protein Homology CDS 3742222 3744152 . - 0 ID=cds3743;Parent=gene3790;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acyl-ACP synthetase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3744332 3745011 . - . ID=gene3791;Name=SOPEG_RS18600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18600;pseudo=true NZ_CP006568.1 Protein Homology CDS 3744332 3745011 . - 0 ID=cds3744;Parent=gene3791;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3745532 3747814 . - . ID=gene3792;Name=SOPEG_RS18605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18605;pseudo=true NZ_CP006568.1 Protein Homology CDS 3745532 3747814 . - 0 ID=cds3745;Parent=gene3792;gbkey=CDS;product=biotin transporter BioY;pseudo=true;transl_except=(pos:complement(3746939..3746941)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3748020 3749020 . + . ID=gene3793;Name=SOPEG_RS18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18610;pseudo=true NZ_CP006568.1 Protein Homology CDS 3748020 3749020 . + 0 ID=cds3746;Parent=gene3793;Note=controls transcription of galETKM;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3749459 3752042 . + . ID=id547;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3749581 3750330 . - . ID=gene3794;Name=SOPEG_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18615;old_locus_tag=SOPEG_3455 NZ_CP006568.1 Protein Homology CDS 3749581 3750330 . - 0 ID=cds3747;Parent=gene3794;Dbxref=Genbank:WP_025246478.1;Name=WP_025246478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246478.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3750342 3751859 . - . ID=gene3795;Name=SOPEG_RS18620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18620;pseudo=true NZ_CP006568.1 Protein Homology CDS 3750342 3751859 . - 0 ID=cds3748;Parent=gene3795;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(3751389..3751391)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3752042 3752746 . + . ID=gene3796;Name=SOPEG_RS18625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18625;partial=true;pseudo=true;start_range=.,3752042 NZ_CP006568.1 Protein Homology CDS 3752042 3752746 . + 0 ID=cds3749;Parent=gene3796;gbkey=CDS;partial=true;product=formate/nitrite transporter;pseudo=true;start_range=.,3752042;transl_except=(pos:3752417..3752419%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3752808 3753710 . - . ID=gene3797;Name=SOPEG_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18630;old_locus_tag=SOPEG_3457 NZ_CP006568.1 Protein Homology CDS 3752808 3753710 . - 0 ID=cds3750;Parent=gene3797;Dbxref=Genbank:WP_025246479.1;Name=WP_025246479.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246479.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3754160 3754702 . + . ID=gene3798;Name=SOPEG_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18635 NZ_CP006568.1 Protein Homology CDS 3754160 3754702 . + 0 ID=cds3751;Parent=gene3798;Dbxref=Genbank:WP_051419917.1;Name=WP_051419917.1;gbkey=CDS;product=haloacid dehalogenase;protein_id=WP_051419917.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3754902 3756170 . - . ID=gene3799;Name=SOPEG_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18640;old_locus_tag=SOPEG_3459 NZ_CP006568.1 Protein Homology CDS 3754902 3756170 . - 0 ID=cds3752;Parent=gene3799;Dbxref=Genbank:WP_025246480.1;Name=WP_025246480.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_025246480.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3756318 3757238 . + . ID=gene3800;Name=SOPEG_RS18645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18645;pseudo=true NZ_CP006568.1 Protein Homology CDS 3756318 3757238 . + 0 ID=cds3753;Parent=gene3800;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_except=(pos:3756339..3756341%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3757235 3758392 . - . ID=gene3801;Name=SOPEG_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18650;old_locus_tag=SOPEG_3461 NZ_CP006568.1 Protein Homology CDS 3757235 3758392 . - 0 ID=cds3754;Parent=gene3801;Dbxref=Genbank:WP_025246481.1;Name=WP_025246481.1;gbkey=CDS;product=arabinose transporter permease;protein_id=WP_025246481.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3758527 3759234 . - . ID=gene3802;Name=SOPEG_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18655;old_locus_tag=SOPEG_3462 NZ_CP006568.1 Protein Homology CDS 3758527 3759234 . - 0 ID=cds3755;Parent=gene3802;Dbxref=Genbank:WP_025246482.1;Name=WP_025246482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246482.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3759322 3759519 . - . ID=gene3803;Name=SOPEG_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18660 NZ_CP006568.1 GeneMarkS+ CDS 3759322 3759519 . - 0 ID=cds3756;Parent=gene3803;Dbxref=Genbank:WP_025246483.1;Name=WP_025246483.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246483.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3759710 3760729 . - . ID=gene3804;Name=SOPEG_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18665;old_locus_tag=SOPEG_3463 NZ_CP006568.1 Protein Homology CDS 3759710 3760729 . - 0 ID=cds3757;Parent=gene3804;Dbxref=Genbank:WP_038470481.1;Name=WP_038470481.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_038470481.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3760915 3761831 . - . ID=gene3805;Name=SOPEG_RS18670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18670;pseudo=true NZ_CP006568.1 Protein Homology CDS 3760915 3761831 . - 0 ID=cds3758;Parent=gene3805;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dihydrodipicolinate synthetase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3761985 3766951 . + . ID=id548;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3762325 3763701 . + . ID=gene3806;Name=SOPEG_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18675 NZ_CP006568.1 Protein Homology CDS 3762325 3763701 . + 0 ID=cds3759;Parent=gene3806;Dbxref=Genbank:WP_051419918.1;Name=WP_051419918.1;gbkey=CDS;product=transposase;protein_id=WP_051419918.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3763713 3764462 . + . ID=gene3807;Name=SOPEG_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18680;old_locus_tag=SOPEG_3466 NZ_CP006568.1 Protein Homology CDS 3763713 3764462 . + 0 ID=cds3760;Parent=gene3807;Dbxref=Genbank:WP_025245285.1;Name=WP_025245285.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245285.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3764633 3765841 . - . ID=gene3808;Name=SOPEG_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18685;old_locus_tag=SOPEG_3467 NZ_CP006568.1 Protein Homology CDS 3764633 3765841 . - 0 ID=cds3761;Parent=gene3808;Dbxref=Genbank:WP_025244301.1;Name=WP_025244301.1;gbkey=CDS;product=transposase;protein_id=WP_025244301.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3765951 3766874 . - . ID=gene3809;Name=SOPEG_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18690;old_locus_tag=SOPEG_3468 NZ_CP006568.1 Protein Homology CDS 3765951 3766874 . - 0 ID=cds3762;Parent=gene3809;Dbxref=Genbank:WP_025244865.1;Name=WP_025244865.1;gbkey=CDS;product=transposase;protein_id=WP_025244865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3766979 3767768 . - . ID=gene3810;Name=SOPEG_RS18695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18695;partial=true;pseudo=true;start_range=.,3766979 NZ_CP006568.1 Protein Homology CDS 3766979 3767768 . - 0 ID=cds3763;Parent=gene3810;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=spermidine/putrescine ABC transporter;pseudo=true;start_range=.,3766979;transl_table=11 NZ_CP006568.1 RefSeq gene 3767749 3769452 . - . ID=gene3811;Name=SOPEG_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18700;old_locus_tag=SOPEG_3470 NZ_CP006568.1 Protein Homology CDS 3767749 3769452 . - 0 ID=cds3764;Parent=gene3811;Dbxref=Genbank:WP_025246485.1;Name=WP_025246485.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_025246485.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3769492 3770242 . - . ID=gene3812;Name=SOPEG_RS18705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18705;pseudo=true NZ_CP006568.1 Protein Homology CDS 3769492 3770242 . - 0 ID=cds3765;Parent=gene3812;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3770162..3770164)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3770304 3771350 . - . ID=gene3813;Name=SOPEG_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18710;old_locus_tag=SOPEG_3472 NZ_CP006568.1 Protein Homology CDS 3770304 3771350 . - 0 ID=cds3766;Parent=gene3813;Dbxref=Genbank:WP_025246486.1;Name=WP_025246486.1;gbkey=CDS;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_025246486.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3771378 3772112 . - . ID=gene3814;Name=SOPEG_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18715;old_locus_tag=SOPEG_3473 NZ_CP006568.1 Protein Homology CDS 3771378 3772112 . - 0 ID=cds3767;Parent=gene3814;Dbxref=Genbank:WP_025246487.1;Name=WP_025246487.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_025246487.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3772171 3772836 . - . ID=gene3815;Name=SOPEG_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18720;old_locus_tag=SOPEG_3474 NZ_CP006568.1 Protein Homology CDS 3772171 3772836 . - 0 ID=cds3768;Parent=gene3815;Dbxref=Genbank:WP_025246488.1;Name=WP_025246488.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_025246488.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3773220 3773645 . - . ID=gene3816;Name=SOPEG_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18725;old_locus_tag=SOPEG_3475 NZ_CP006568.1 Protein Homology CDS 3773220 3773645 . - 0 ID=cds3769;Parent=gene3816;Dbxref=Genbank:WP_038469052.1;Name=WP_038469052.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469052.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3773719 3774589 . - . ID=gene3817;Name=SOPEG_RS18730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18730;pseudo=true NZ_CP006568.1 Protein Homology CDS 3773719 3774589 . - 0 ID=cds3770;Parent=gene3817;exception=annotated by transcript or proteomic data;gbkey=CDS;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3774771 3775091 . - . ID=gene3818;Name=SOPEG_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18735 NZ_CP006568.1 GeneMarkS+ CDS 3774771 3775091 . - 0 ID=cds3771;Parent=gene3818;Dbxref=Genbank:WP_038469055.1;Name=WP_038469055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469055.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3775354 3776565 . - . ID=gene3819;Name=SOPEG_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23395;old_locus_tag=SOPEG_ps3477 NZ_CP006568.1 Protein Homology CDS 3775354 3776565 . - 0 ID=cds3772;Parent=gene3819;Dbxref=Genbank:WP_025246491.1;Name=WP_025246491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246491.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3776800 3777698 . + . ID=gene3820;Name=SOPEG_RS18745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18745;pseudo=true NZ_CP006568.1 Protein Homology CDS 3776800 3777698 . + 0 ID=cds3773;Parent=gene3820;exception=annotated by transcript or proteomic data;gbkey=CDS;product=6-phosphogluconate dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3777695 3777907 . + . ID=gene3821;Name=SOPEG_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18750 NZ_CP006568.1 Protein Homology CDS 3777695 3777907 . + 0 ID=cds3774;Parent=gene3821;Dbxref=Genbank:WP_025246492.1;Name=WP_025246492.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246492.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3777900 3785207 . + . ID=id549;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3778011 3778256 . - . ID=gene3822;Name=SOPEG_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18755 NZ_CP006568.1 Protein Homology CDS 3778011 3778256 . - 0 ID=cds3775;Parent=gene3822;Dbxref=Genbank:WP_051419377.1;Name=WP_051419377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3778466 3779389 . + . ID=gene3823;Name=SOPEG_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18760;old_locus_tag=SOPEG_3481 NZ_CP006568.1 Protein Homology CDS 3778466 3779389 . + 0 ID=cds3776;Parent=gene3823;Dbxref=Genbank:WP_025246493.1;Name=WP_025246493.1;gbkey=CDS;product=transposase;protein_id=WP_025246493.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3780548 3780805 . + . ID=gene3824;Name=SOPEG_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18765 NZ_CP006568.1 GeneMarkS+ CDS 3780548 3780805 . + 0 ID=cds3777;Parent=gene3824;Dbxref=Genbank:WP_025246495.1;Name=WP_025246495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246495.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3781046 3781897 . - . ID=gene3825;Name=SOPEG_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18770 NZ_CP006568.1 Protein Homology CDS 3781046 3781897 . - 0 ID=cds3778;Parent=gene3825;Dbxref=Genbank:WP_025246496.1;Name=WP_025246496.1;gbkey=CDS;product=transposase;protein_id=WP_025246496.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3782195 3783130 . - . ID=gene3826;Name=SOPEG_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18775;old_locus_tag=SOPEG_3485 NZ_CP006568.1 Protein Homology CDS 3782195 3783130 . - 0 ID=cds3779;Parent=gene3826;Dbxref=Genbank:WP_025246497.1;Name=WP_025246497.1;gbkey=CDS;product=transposase;protein_id=WP_025246497.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3783412 3784158 . + . ID=gene3827;Name=SOPEG_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18780 NZ_CP006568.1 Protein Homology CDS 3783412 3784158 . + 0 ID=cds3780;Parent=gene3827;Dbxref=Genbank:WP_051419919.1;Name=WP_051419919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419919.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3784223 3785148 . + . ID=gene3828;Name=SOPEG_RS18785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18785;pseudo=true NZ_CP006568.1 Protein Homology CDS 3784223 3785148 . + 0 ID=cds3781;Parent=gene3828;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:3784328..3784330%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3785141 3785938 . - . ID=gene3829;Name=SOPEG_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18790 NZ_CP006568.1 Protein Homology CDS 3785141 3785938 . - 0 ID=cds3782;Parent=gene3829;Dbxref=Genbank:WP_025246499.1;Name=WP_025246499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246499.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3785935 3786392 . - . ID=gene3830;Name=SOPEG_RS18795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18795;pseudo=true NZ_CP006568.1 Protein Homology CDS 3785935 3786392 . - 0 ID=cds3783;Parent=gene3830;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3786396 3787720 . + . ID=id550;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3786472 3787683 . + . ID=gene3831;Name=SOPEG_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18800;old_locus_tag=SOPEG_3490 NZ_CP006568.1 Protein Homology CDS 3786472 3787683 . + 0 ID=cds3784;Parent=gene3831;Dbxref=Genbank:WP_025246500.1;Name=WP_025246500.1;gbkey=CDS;product=transposase;protein_id=WP_025246500.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3787825 3790437 . + . ID=id551;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3787949 3788698 . - . ID=gene3832;Name=SOPEG_RS18805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18805;pseudo=true NZ_CP006568.1 Protein Homology CDS 3787949 3788698 . - 0 ID=cds3785;Parent=gene3832;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3788447..3788449)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3788710 3790266 . - . ID=gene3833;Name=SOPEG_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18810;old_locus_tag=SOPEG_3492 NZ_CP006568.1 Protein Homology CDS 3788710 3790266 . - 0 ID=cds3786;Parent=gene3833;Dbxref=Genbank:WP_038469058.1;Name=WP_038469058.1;gbkey=CDS;product=transposase;protein_id=WP_038469058.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3790626 3791612 . - . ID=gene3834;Name=SOPEG_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18815;old_locus_tag=SOPEG_3493 NZ_CP006568.1 Protein Homology CDS 3790626 3791612 . - 0 ID=cds3787;Parent=gene3834;Dbxref=Genbank:WP_025246502.1;Name=WP_025246502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246502.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3791614 3792078 . - . ID=gene3835;Name=SOPEG_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18820 NZ_CP006568.1 Protein Homology CDS 3791614 3792078 . - 0 ID=cds3788;Parent=gene3835;Dbxref=Genbank:WP_025246503.1;Name=WP_025246503.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246503.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3792159 3793216 . + . ID=id552;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3792213 3793136 . - . ID=gene3836;Name=SOPEG_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18825;old_locus_tag=SOPEG_3495 NZ_CP006568.1 Protein Homology CDS 3792213 3793136 . - 0 ID=cds3789;Parent=gene3836;Dbxref=Genbank:WP_025246504.1;Name=WP_025246504.1;gbkey=CDS;product=transposase;protein_id=WP_025246504.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3793197 3794027 . - . ID=gene3837;Name=SOPEG_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18830 NZ_CP006568.1 Protein Homology CDS 3793197 3794027 . - 0 ID=cds3790;Parent=gene3837;Dbxref=Genbank:WP_051419920.1;Name=WP_051419920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419920.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3794269 3794478 . - . ID=gene3838;Name=SOPEG_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18835 NZ_CP006568.1 GeneMarkS+ CDS 3794269 3794478 . - 0 ID=cds3791;Parent=gene3838;Dbxref=Genbank:WP_025246506.1;Name=WP_025246506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246506.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3794548 3798161 . - . ID=gene3839;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=SOPEG_RS18840;pseudo=true NZ_CP006568.1 Protein Homology CDS 3794548 3798161 . - 0 ID=cds3792;Parent=gene3839;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3798103 3799165 . + . ID=id553;gbkey=repeat_region;gene=metH NZ_CP006568.1 RefSeq gene 3798164 3799087 . - . ID=gene3840;Name=SOPEG_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18845;old_locus_tag=SOPEG_3497 NZ_CP006568.1 Protein Homology CDS 3798164 3799087 . - 0 ID=cds3793;Parent=gene3840;Dbxref=Genbank:WP_025246358.1;Name=WP_025246358.1;gbkey=CDS;product=transposase;protein_id=WP_025246358.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3799540 3800070 . + . ID=gene3841;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=SOPEG_RS18850;old_locus_tag=SOPEG_3498 NZ_CP006568.1 Protein Homology CDS 3799540 3800070 . + 0 ID=cds3794;Parent=gene3841;Dbxref=Genbank:WP_025246507.1;Name=WP_025246507.1;Note=thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate;gbkey=CDS;gene=gntK;product=gluconate kinase;protein_id=WP_025246507.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3800443 3801765 . + . ID=id554;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3800519 3801727 . + . ID=gene3842;Name=SOPEG_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18855;old_locus_tag=SOPEG_3499 NZ_CP006568.1 Protein Homology CDS 3800519 3801727 . + 0 ID=cds3795;Parent=gene3842;Dbxref=Genbank:WP_025246508.1;Name=WP_025246508.1;gbkey=CDS;product=transposase;protein_id=WP_025246508.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3801750 3802265 . + . ID=gene3843;Name=SOPEG_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18860 NZ_CP006568.1 Protein Homology CDS 3801750 3802265 . + 0 ID=cds3796;Parent=gene3843;Dbxref=Genbank:WP_025246509.1;Name=WP_025246509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246509.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3802179 3804720 . + . ID=id555;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3802303 3803052 . - . ID=gene3844;Name=SOPEG_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18865;old_locus_tag=SOPEG_3501 NZ_CP006568.1 Protein Homology CDS 3802303 3803052 . - 0 ID=cds3797;Parent=gene3844;Dbxref=Genbank:WP_025246510.1;Name=WP_025246510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246510.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3803236 3803559 . - . ID=gene3845;Name=SOPEG_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23400 NZ_CP006568.1 Protein Homology CDS 3803236 3803559 . - 0 ID=cds3798;Parent=gene3845;Dbxref=Genbank:WP_051419921.1;Name=WP_051419921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3803620 3804591 . - . ID=gene3846;Name=SOPEG_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23405 NZ_CP006568.1 Protein Homology CDS 3803620 3804591 . - 0 ID=cds3799;Parent=gene3846;Dbxref=Genbank:WP_051419922.1;Name=WP_051419922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419922.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3804748 3804942 . + . ID=gene3847;Name=SOPEG_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18875 NZ_CP006568.1 GeneMarkS+ CDS 3804748 3804942 . + 0 ID=cds3800;Parent=gene3847;Dbxref=Genbank:WP_025246511.1;Name=WP_025246511.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246511.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3804943 3805182 . + . ID=gene3848;Name=SOPEG_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18880 NZ_CP006568.1 GeneMarkS+ CDS 3804943 3805182 . + 0 ID=cds3801;Parent=gene3848;Dbxref=Genbank:WP_025246512.1;Name=WP_025246512.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246512.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3806180 3807610 . + . ID=gene3849;Name=SOPEG_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18885;old_locus_tag=SOPEG_3504 NZ_CP006568.1 Protein Homology CDS 3806180 3807610 . + 0 ID=cds3802;Parent=gene3849;Dbxref=Genbank:WP_025246513.1;Name=WP_025246513.1;gbkey=CDS;product=gamma-aminobutyrate transporter;protein_id=WP_025246513.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3809104 3810706 . - . ID=gene3850;Name=treA;gbkey=Gene;gene=treA;gene_biotype=pseudogene;locus_tag=SOPEG_RS18890;pseudo=true NZ_CP006568.1 Protein Homology CDS 3809104 3810706 . - 0 ID=cds3803;Parent=gene3850;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=treA;product=trehalase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3811181 3812138 . - . ID=gene3851;Name=SOPEG_RS18895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18895;pseudo=true NZ_CP006568.1 Protein Homology CDS 3811181 3812138 . - 0 ID=cds3804;Parent=gene3851;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3812311 3812517 . + . ID=gene3852;Name=SOPEG_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18900 NZ_CP006568.1 GeneMarkS+ CDS 3812311 3812517 . + 0 ID=cds3805;Parent=gene3852;Dbxref=Genbank:WP_038469062.1;Name=WP_038469062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469062.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3812391 3816027 . + . ID=id556;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3812514 3813263 . - . ID=gene3853;Name=SOPEG_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18905 NZ_CP006568.1 Protein Homology CDS 3812514 3813263 . - 0 ID=cds3806;Parent=gene3853;Dbxref=Genbank:WP_025246516.1;Name=WP_025246516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246516.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3813384 3813629 . - . ID=gene3854;Name=SOPEG_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23410 NZ_CP006568.1 Protein Homology CDS 3813384 3813629 . - 0 ID=cds3807;Parent=gene3854;Dbxref=Genbank:WP_051419377.1;Name=WP_051419377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3813714 3813962 . - . ID=gene3855;Name=SOPEG_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23415 NZ_CP006568.1 Protein Homology CDS 3813714 3813962 . - 0 ID=cds3808;Parent=gene3855;Dbxref=Genbank:WP_051419380.1;Name=WP_051419380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419380.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3815021 3815945 . - . ID=gene3856;Name=SOPEG_RS18915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18915;pseudo=true NZ_CP006568.1 Protein Homology CDS 3815021 3815945 . - 0 ID=cds3809;Parent=gene3856;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3816088 3818659 . + . ID=id557;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3816164 3816606 . + . ID=gene3857;Name=SOPEG_RS18920;end_range=3816606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18920;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3816164 3816606 . + 0 ID=cds3810;Parent=gene3857;end_range=3816606,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3816894 3817373 . + . ID=gene3858;Name=SOPEG_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18925 NZ_CP006568.1 Protein Homology CDS 3816894 3817373 . + 0 ID=cds3811;Parent=gene3858;Dbxref=Genbank:WP_025246518.1;Name=WP_025246518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246518.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3817735 3818577 . - . ID=gene3859;Name=SOPEG_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18930 NZ_CP006568.1 Protein Homology CDS 3817735 3818577 . - 0 ID=cds3812;Parent=gene3859;Dbxref=Genbank:WP_025245778.1;Name=WP_025245778.1;gbkey=CDS;product=transposase;protein_id=WP_025245778.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3819247 3820565 . + . ID=id558;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3819284 3820489 . - . ID=gene3860;Name=SOPEG_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18940;old_locus_tag=SOPEG_3517 NZ_CP006568.1 Protein Homology CDS 3819284 3820489 . - 0 ID=cds3813;Parent=gene3860;Dbxref=Genbank:WP_025246521.1;Name=WP_025246521.1;gbkey=CDS;product=transposase;protein_id=WP_025246521.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3820530 3821069 . - . ID=gene3861;Name=SOPEG_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18945 NZ_CP006568.1 Protein Homology CDS 3820530 3821069 . - 0 ID=cds3814;Parent=gene3861;Dbxref=Genbank:WP_051419923.1;Name=WP_051419923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419923.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3821261 3822794 . - . ID=gene3862;Name=SOPEG_RS18950;end_range=3822794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18950;partial=true;pseudo=true;start_range=.,3821261 NZ_CP006568.1 Protein Homology CDS 3821261 3822794 . - 0 ID=cds3815;Parent=gene3862;end_range=3822794,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=conjugal transfer protein TrbC;pseudo=true;start_range=.,3821261;transl_table=11 NZ_CP006568.1 RefSeq gene 3822899 3823279 . - . ID=gene3863;Name=SOPEG_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18955 NZ_CP006568.1 Protein Homology CDS 3822899 3823279 . - 0 ID=cds3816;Parent=gene3863;Dbxref=Genbank:WP_051419924.1;Name=WP_051419924.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419924.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3823279 3824056 . - . ID=gene3864;Name=SOPEG_RS18960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS18960;pseudo=true NZ_CP006568.1 Protein Homology CDS 3823279 3824056 . - 0 ID=cds3817;Parent=gene3864;exception=annotated by transcript or proteomic data;gbkey=CDS;product=conjugal transfer protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3824115 3824342 . - . ID=gene3865;Name=SOPEG_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18965 NZ_CP006568.1 Protein Homology CDS 3824115 3824342 . - 0 ID=cds3818;Parent=gene3865;Dbxref=Genbank:WP_038469066.1;Name=WP_038469066.1;gbkey=CDS;product=transposase;protein_id=WP_038469066.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3824126 3824423 . + . ID=id559;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3824620 3825270 . + . ID=gene3866;Name=SOPEG_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18970;old_locus_tag=SOPEG_3523 NZ_CP006568.1 Protein Homology CDS 3824620 3825270 . + 0 ID=cds3819;Parent=gene3866;Dbxref=Genbank:WP_038469069.1;Name=WP_038469069.1;gbkey=CDS;product=peptidyl-arginine deiminase;protein_id=WP_038469069.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3825624 3825974 . + . ID=gene3867;Name=SOPEG_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18975 NZ_CP006568.1 Protein Homology CDS 3825624 3825974 . + 0 ID=cds3820;Parent=gene3867;Dbxref=Genbank:WP_038469072.1;Name=WP_038469072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469072.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3825953 3830675 . + . ID=id560;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3826016 3826939 . - . ID=gene3868;Name=SOPEG_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18980;old_locus_tag=SOPEG_3525 NZ_CP006568.1 Protein Homology CDS 3826016 3826939 . - 0 ID=cds3821;Parent=gene3868;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3827004 3827750 . - . ID=gene3869;Name=SOPEG_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18985 NZ_CP006568.1 Protein Homology CDS 3827004 3827750 . - 0 ID=cds3822;Parent=gene3869;Dbxref=Genbank:WP_051419925.1;Name=WP_051419925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419925.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3828032 3828469 . + . ID=gene3870;Name=SOPEG_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18990 NZ_CP006568.1 Protein Homology CDS 3828032 3828469 . + 0 ID=cds3823;Parent=gene3870;Dbxref=Genbank:WP_025246522.1;Name=WP_025246522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246522.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3828509 3828955 . + . ID=gene3871;Name=SOPEG_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS18995 NZ_CP006568.1 Protein Homology CDS 3828509 3828955 . + 0 ID=cds3824;Parent=gene3871;Dbxref=Genbank:WP_038469075.1;Name=WP_038469075.1;gbkey=CDS;product=transposase;protein_id=WP_038469075.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3829089 3829358 . + . ID=gene3872;Name=SOPEG_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19000 NZ_CP006568.1 GeneMarkS+ CDS 3829089 3829358 . + 0 ID=cds3825;Parent=gene3872;Dbxref=Genbank:WP_025246524.1;Name=WP_025246524.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246524.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3829502 3830599 . - . ID=gene3873;Name=SOPEG_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19005 NZ_CP006568.1 Protein Homology CDS 3829502 3830599 . - 0 ID=cds3826;Parent=gene3873;Dbxref=Genbank:WP_025246525.1;Name=WP_025246525.1;gbkey=CDS;product=transposase;protein_id=WP_025246525.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3830671 3831678 . - . ID=gene3874;Name=SOPEG_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19010;old_locus_tag=SOPEG_3529 NZ_CP006568.1 Protein Homology CDS 3830671 3831678 . - 0 ID=cds3827;Parent=gene3874;Dbxref=Genbank:WP_038469078.1;Name=WP_038469078.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_038469078.1;transl_table=11 NZ_CP006568.1 cmsearch region 3832139 3832586 . + . ID=id561;Note=cspA;gbkey=misc_feature NZ_CP006568.1 RefSeq gene 3832340 3832564 . - . ID=gene3875;Name=SOPEG_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19015 NZ_CP006568.1 Protein Homology CDS 3832340 3832564 . - 0 ID=cds3828;Parent=gene3875;Dbxref=Genbank:WP_051419926.1;Name=WP_051419926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3833074 3834692 . + . ID=gene3876;Name=SOPEG_RS19020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19020;pseudo=true NZ_CP006568.1 Protein Homology CDS 3833074 3834692 . + 0 ID=cds3829;Parent=gene3876;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3834676 3834959 . + . ID=id562;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 3835342 3836404 . + . ID=id563;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3835421 3836071 . + . ID=gene3877;Name=SOPEG_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19025 NZ_CP006568.1 Protein Homology CDS 3835421 3836071 . + 0 ID=cds3830;Parent=gene3877;Dbxref=Genbank:WP_038469082.1;Name=WP_038469082.1;gbkey=CDS;product=transposase;protein_id=WP_038469082.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3836204 3836344 . + . ID=gene3878;Name=SOPEG_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19030 NZ_CP006568.1 Protein Homology CDS 3836204 3836344 . + 0 ID=cds3831;Parent=gene3878;Dbxref=Genbank:WP_051420012.1;Name=WP_051420012.1;gbkey=CDS;product=cytoplasmic protein;protein_id=WP_051420012.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3836962 3838216 . + . ID=id564;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3837039 3838179 . + . ID=gene3879;Name=SOPEG_RS19040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19040;pseudo=true NZ_CP006568.1 Protein Homology CDS 3837039 3838179 . + 0 ID=cds3832;Parent=gene3879;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:3837624..3837626%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3838312 3839472 . + . ID=gene3880;Name=SOPEG_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19045;old_locus_tag=SOPEG_3535 NZ_CP006568.1 Protein Homology CDS 3838312 3839472 . + 0 ID=cds3833;Parent=gene3880;Dbxref=Genbank:WP_025246528.1;Name=WP_025246528.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_025246528.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3839488 3840607 . + . ID=gene3881;Name=SOPEG_RS19050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19050;pseudo=true NZ_CP006568.1 Protein Homology CDS 3839488 3840607 . + 0 ID=cds3834;Parent=gene3881;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter permease;pseudo=true;transl_except=(pos:3840533..3840535%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3840621 3841379 . + . ID=gene3882;Name=SOPEG_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19055;old_locus_tag=SOPEG_3537 NZ_CP006568.1 Protein Homology CDS 3840621 3841379 . + 0 ID=cds3835;Parent=gene3882;Dbxref=Genbank:WP_025246529.1;Name=WP_025246529.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_025246529.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3841391 3842716 . + . ID=id565;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3841428 3842204 . - . ID=gene3883;Name=SOPEG_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23420 NZ_CP006568.1 Protein Homology CDS 3841428 3842204 . - 0 ID=cds3836;Parent=gene3883;Dbxref=Genbank:WP_051419927.1;Name=WP_051419927.1;gbkey=CDS;product=transposase;protein_id=WP_051419927.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3842251 3842637 . - . ID=gene3884;Name=SOPEG_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19060 NZ_CP006568.1 Protein Homology CDS 3842251 3842637 . - 0 ID=cds3837;Parent=gene3884;Dbxref=Genbank:WP_051419928.1;Name=WP_051419928.1;gbkey=CDS;product=transposase;protein_id=WP_051419928.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3842761 3843102 . + . ID=id566;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3842763 3842878 . - . ID=gene3885;Name=SOPEG_RS19065;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS19065;old_locus_tag=SOPEG_r3539 NZ_CP006568.1 cmsearch rRNA 3842763 3842878 . - . ID=rna47;Parent=gene3885;gbkey=rRNA;product=5S ribosomal RNA NZ_CP006568.1 cmsearch exon 3842763 3842878 . - . ID=id567;Parent=rna47;gbkey=rRNA;product=5S ribosomal RNA NZ_CP006568.1 RefSeq repeat_region 3843106 3846421 . + . ID=id568;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3843138 3846073 . - . ID=gene3886;Name=SOPEG_RS19070;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS19070;old_locus_tag=SOPEG_r3540 NZ_CP006568.1 RefSeq rRNA 3843138 3846073 . - . ID=rna48;Parent=gene3886;gbkey=rRNA;product=23S ribosomal RNA NZ_CP006568.1 RefSeq exon 3843138 3846073 . - . ID=id569;Parent=rna48;gbkey=rRNA;product=23S ribosomal RNA NZ_CP006568.1 RefSeq repeat_region 3846423 3848615 . + . ID=id570;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3846480 3846555 . - . ID=gene3887;Name=SOPEG_RS19075;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19075;old_locus_tag=SOPEG_t3541 NZ_CP006568.1 tRNAscan-SE tRNA 3846480 3846555 . - . ID=rna49;Parent=gene3887;anticodon=(pos:complement(3846520..3846522));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 tRNAscan-SE exon 3846480 3846555 . - . ID=id571;Parent=rna49;anticodon=(pos:complement(3846520..3846522));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 RefSeq gene 3846750 3846826 . - . ID=gene3888;Name=SOPEG_RS19080;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19080;old_locus_tag=SOPEG_t3542 NZ_CP006568.1 tRNAscan-SE tRNA 3846750 3846826 . - . ID=rna50;Parent=gene3888;anticodon=(pos:complement(3846790..3846792));gbkey=tRNA;product=tRNA-Ile NZ_CP006568.1 tRNAscan-SE exon 3846750 3846826 . - . ID=id572;Parent=rna50;anticodon=(pos:complement(3846790..3846792));gbkey=tRNA;product=tRNA-Ile NZ_CP006568.1 RefSeq gene 3846897 3848446 . - . ID=gene3889;Name=SOPEG_RS19085;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS19085;old_locus_tag=SOPEG_r3543 NZ_CP006568.1 RefSeq rRNA 3846897 3848446 . - . ID=rna51;Parent=gene3889;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq exon 3846897 3848446 . - . ID=id573;Parent=rna51;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq gene 3848999 3850589 . + . ID=gene3890;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=SOPEG_RS19090;pseudo=true NZ_CP006568.1 Protein Homology CDS 3848999 3850589 . + 0 ID=cds3838;Parent=gene3890;Note=involved in de novo purine biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=purH;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3850609 3851892 . + . ID=gene3891;Name=SOPEG_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19095;old_locus_tag=SOPEG_3545 NZ_CP006568.1 Protein Homology CDS 3850609 3851892 . + 0 ID=cds3839;Parent=gene3891;Dbxref=Genbank:WP_025246530.1;Name=WP_025246530.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_025246530.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3851941 3852396 . - . ID=gene3892;Name=SOPEG_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19100 NZ_CP006568.1 Protein Homology CDS 3851941 3852396 . - 0 ID=cds3840;Parent=gene3892;Dbxref=Genbank:WP_051419929.1;Name=WP_051419929.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419929.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3852571 3852843 . - . ID=gene3893;Name=SOPEG_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19105;old_locus_tag=SOPEG_3547 NZ_CP006568.1 Protein Homology CDS 3852571 3852843 . - 0 ID=cds3841;Parent=gene3893;Dbxref=Genbank:WP_025246531.1;Name=WP_025246531.1;gbkey=CDS;product=DNA-binding protein HU-alpha;protein_id=WP_025246531.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3853034 3853624 . - . ID=gene3894;Name=SOPEG_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19110;old_locus_tag=SOPEG_3548 NZ_CP006568.1 Protein Homology CDS 3853034 3853624 . - 0 ID=cds3842;Parent=gene3894;Dbxref=Genbank:WP_025246532.1;Name=WP_025246532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246532.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3853682 3854377 . - . ID=gene3895;Name=SOPEG_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19115;old_locus_tag=SOPEG_3549 NZ_CP006568.1 Protein Homology CDS 3853682 3854377 . - 0 ID=cds3843;Parent=gene3895;Dbxref=Genbank:WP_025246533.1;Name=WP_025246533.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_025246533.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3854389 3855454 . - . ID=gene3896;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=pseudogene;locus_tag=SOPEG_RS19120;pseudo=true NZ_CP006568.1 Protein Homology CDS 3854389 3855454 . - 0 ID=cds3844;Parent=gene3896;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3855503 3856270 . - . ID=gene3897;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=SOPEG_RS19125;old_locus_tag=SOPEG_3551 NZ_CP006568.1 Protein Homology CDS 3855503 3856270 . - 0 ID=cds3845;Parent=gene3897;Dbxref=Genbank:WP_025246534.1;Name=WP_025246534.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_025246534.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3856378 3856900 . + . ID=gene3898;Name=SOPEG_RS19130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19130;pseudo=true NZ_CP006568.1 Protein Homology CDS 3856378 3856900 . + 0 ID=cds3846;Parent=gene3898;exception=annotated by transcript or proteomic data;gbkey=CDS;product=regulator of sigma D;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3857196 3859022 . + . ID=gene3899;Name=SOPEG_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19135;old_locus_tag=SOPEG_3553 NZ_CP006568.1 Protein Homology CDS 3857196 3859022 . + 0 ID=cds3847;Parent=gene3899;Dbxref=Genbank:WP_025246535.1;Name=WP_025246535.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=thiamine biosynthesis protein ThiC;protein_id=WP_025246535.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3859012 3859662 . + . ID=gene3900;Name=SOPEG_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19140;old_locus_tag=SOPEG_3554 NZ_CP006568.1 Protein Homology CDS 3859012 3859662 . + 0 ID=cds3848;Parent=gene3900;Dbxref=Genbank:WP_025246536.1;Name=WP_025246536.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_025246536.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3859694 3860384 . + . ID=gene3901;Name=SOPEG_RS19145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19145;pseudo=true NZ_CP006568.1 Protein Homology CDS 3859694 3860384 . + 0 ID=cds3849;Parent=gene3901;exception=annotated by transcript or proteomic data;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3860384 3860584 . + . ID=gene3902;Name=SOPEG_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19150;old_locus_tag=SOPEG_3556 NZ_CP006568.1 Protein Homology CDS 3860384 3860584 . + 0 ID=cds3850;Parent=gene3902;Dbxref=Genbank:WP_025246537.1;Name=WP_025246537.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_025246537.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3860588 3861321 . + . ID=gene3903;Name=SOPEG_RS19155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19155;pseudo=true NZ_CP006568.1 Protein Homology CDS 3860588 3861321 . + 0 ID=cds3851;Parent=gene3903;exception=annotated by transcript or proteomic data;gbkey=CDS;product=thiazole synthase;pseudo=true;transl_except=(pos:3860768..3860770%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3861318 3861683 . + . ID=gene3904;Name=SOPEG_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23425 NZ_CP006568.1 Protein Homology CDS 3861318 3861683 . + 0 ID=cds3852;Parent=gene3904;Dbxref=Genbank:WP_025246538.1;Name=WP_025246538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246538.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3861656 3861958 . + . ID=gene3905;Name=SOPEG_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23430 NZ_CP006568.1 Protein Homology CDS 3861656 3861958 . + 0 ID=cds3853;Parent=gene3905;Dbxref=Genbank:WP_025246539.1;Name=WP_025246539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246539.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3861951 3865853 . + . ID=id574;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3862061 3862819 . - . ID=gene3906;Name=SOPEG_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19165;old_locus_tag=SOPEG_3559 NZ_CP006568.1 Protein Homology CDS 3862061 3862819 . - 0 ID=cds3854;Parent=gene3906;Dbxref=Genbank:WP_038469085.1;Name=WP_038469085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469085.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3863213 3863656 . - . ID=gene3907;Name=SOPEG_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19170 NZ_CP006568.1 Protein Homology CDS 3863213 3863656 . - 0 ID=cds3855;Parent=gene3907;Dbxref=Genbank:WP_038469088.1;Name=WP_038469088.1;gbkey=CDS;product=transposase;protein_id=WP_038469088.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3863715 3864638 . + . ID=gene3908;Name=SOPEG_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19175;old_locus_tag=SOPEG_3561 NZ_CP006568.1 Protein Homology CDS 3863715 3864638 . + 0 ID=cds3856;Parent=gene3908;Dbxref=Genbank:WP_025246541.1;Name=WP_025246541.1;gbkey=CDS;product=transposase;protein_id=WP_025246541.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3864673 3865200 . - . ID=gene3909;Name=SOPEG_RS19180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19180;partial=true;pseudo=true;start_range=.,3864673 NZ_CP006568.1 Protein Homology CDS 3864673 3865200 . - 0 ID=cds3857;Parent=gene3909;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,3864673;transl_table=11 NZ_CP006568.1 RefSeq gene 3865620 3866145 . + . ID=gene3910;Name=SOPEG_RS19185;end_range=3866145,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19185;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3865620 3866145 . + 0 ID=cds3858;Parent=gene3910;end_range=3866145,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3866142 3867456 . + . ID=id575;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3866342 3867424 . + . ID=gene3911;Name=SOPEG_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19190 NZ_CP006568.1 Protein Homology CDS 3866342 3867424 . + 0 ID=cds3859;Parent=gene3911;Dbxref=Genbank:WP_025246543.1;Name=WP_025246543.1;gbkey=CDS;product=transposase;protein_id=WP_025246543.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3867785 3868850 . - . ID=gene3912;Name=SOPEG_RS19200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19200;pseudo=true NZ_CP006568.1 Protein Homology CDS 3867785 3868850 . - 0 ID=cds3860;Parent=gene3912;exception=annotated by transcript or proteomic data;gbkey=CDS;product=capsid protein;pseudo=true;transl_except=(pos:complement(3868308..3868310)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3868997 3869584 . - . ID=gene3913;Name=SOPEG_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19205 NZ_CP006568.1 Protein Homology CDS 3868997 3869584 . - 0 ID=cds3861;Parent=gene3913;Dbxref=Genbank:WP_051419930.1;Name=WP_051419930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419930.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3869853 3871621 . + . ID=gene3914;Name=SOPEG_RS19210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19210;pseudo=true NZ_CP006568.1 Protein Homology CDS 3869853 3871621 . + 0 ID=cds3862;Parent=gene3914;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_except=(pos:3870425..3870427%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3871623 3872654 . + . ID=gene3915;Name=SOPEG_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19215;old_locus_tag=SOPEG_3568 NZ_CP006568.1 Protein Homology CDS 3871623 3872654 . + 0 ID=cds3863;Parent=gene3915;Dbxref=Genbank:WP_025246544.1;Name=WP_025246544.1;gbkey=CDS;product=phage capsid portal protein;protein_id=WP_025246544.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3873109 3873473 . + . ID=gene3916;Name=SOPEG_RS19220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19220;pseudo=true NZ_CP006568.1 Protein Homology CDS 3873109 3873473 . + 0 ID=cds3864;Parent=gene3916;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3873294..3873296%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3874116 3874496 . - . ID=gene3917;Name=SOPEG_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19225 NZ_CP006568.1 Protein Homology CDS 3874116 3874496 . - 0 ID=cds3865;Parent=gene3917;Dbxref=Genbank:WP_038469091.1;Name=WP_038469091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469091.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3874601 3875466 . - . ID=gene3918;Name=SOPEG_RS19230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19230;pseudo=true NZ_CP006568.1 Protein Homology CDS 3874601 3875466 . - 0 ID=cds3866;Parent=gene3918;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3875533 3875742 . - . ID=gene3919;Name=SOPEG_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19235;old_locus_tag=SOPEG_3572 NZ_CP006568.1 Protein Homology CDS 3875533 3875742 . - 0 ID=cds3867;Parent=gene3919;Dbxref=Genbank:WP_025246545.1;Name=WP_025246545.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246545.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3875735 3876061 . - . ID=gene3920;Name=SOPEG_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19240;old_locus_tag=SOPEG_3573 NZ_CP006568.1 Protein Homology CDS 3875735 3876061 . - 0 ID=cds3868;Parent=gene3920;Dbxref=Genbank:WP_038470527.1;Name=WP_038470527.1;gbkey=CDS;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_038470527.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3876136 3877125 . - . ID=gene3921;Name=SOPEG_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23435 NZ_CP006568.1 Protein Homology CDS 3876136 3877125 . - 0 ID=cds3869;Parent=gene3921;Dbxref=Genbank:WP_051419931.1;Name=WP_051419931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419931.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3877146 3877601 . - . ID=gene3922;Name=SOPEG_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23440 NZ_CP006568.1 GeneMarkS+ CDS 3877146 3877601 . - 0 ID=cds3870;Parent=gene3922;Dbxref=Genbank:WP_051419932.1;Name=WP_051419932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419932.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3877594 3877872 . - . ID=gene3923;Name=SOPEG_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23445 NZ_CP006568.1 GeneMarkS+ CDS 3877594 3877872 . - 0 ID=cds3871;Parent=gene3923;Dbxref=Genbank:WP_051419933.1;Name=WP_051419933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419933.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3877823 3878326 . - . ID=gene3924;Name=SOPEG_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23450 NZ_CP006568.1 Protein Homology CDS 3877823 3878326 . - 0 ID=cds3872;Parent=gene3924;Dbxref=Genbank:WP_051419934.1;Name=WP_051419934.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419934.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3878391 3879197 . - . ID=gene3925;Name=SOPEG_RS19250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19250;old_locus_tag=SOPEG_3575;partial=true;pseudo=true;start_range=.,3878391 NZ_CP006568.1 Protein Homology CDS 3878391 3879197 . - 0 ID=cds3873;Parent=gene3925;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3878391;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3879130 3879274 . + . ID=id576;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3879208 3879777 . - . ID=gene3926;Name=SOPEG_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19255;old_locus_tag=SOPEG_3576 NZ_CP006568.1 Protein Homology CDS 3879208 3879777 . - 0 ID=cds3874;Parent=gene3926;Dbxref=Genbank:WP_025246548.1;Name=WP_025246548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246548.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3879777 3880034 . - . ID=gene3927;Name=SOPEG_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19260 NZ_CP006568.1 Protein Homology CDS 3879777 3880034 . - 0 ID=cds3875;Parent=gene3927;Dbxref=Genbank:WP_025246549.1;Name=WP_025246549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246549.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3880116 3880328 . - . ID=gene3928;Name=SOPEG_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19265;old_locus_tag=SOPEG_3577 NZ_CP006568.1 GeneMarkS+ CDS 3880116 3880328 . - 0 ID=cds3876;Parent=gene3928;Dbxref=Genbank:WP_025246550.1;Name=WP_025246550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246550.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3881106 3882426 . + . ID=id577;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3881142 3882350 . - . ID=gene3929;Name=SOPEG_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19270;old_locus_tag=SOPEG_3578 NZ_CP006568.1 Protein Homology CDS 3881142 3882350 . - 0 ID=cds3877;Parent=gene3929;Dbxref=Genbank:WP_025246552.1;Name=WP_025246552.1;gbkey=CDS;product=transposase;protein_id=WP_025246552.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3882467 3885072 . + . ID=id578;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3882589 3883338 . - . ID=gene3930;Name=SOPEG_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19275;old_locus_tag=SOPEG_3579 NZ_CP006568.1 Protein Homology CDS 3882589 3883338 . - 0 ID=cds3878;Parent=gene3930;Dbxref=Genbank:WP_025246553.1;Name=WP_025246553.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246553.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3883350 3884867 . - . ID=gene3931;Name=SOPEG_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19280;old_locus_tag=SOPEG_3580 NZ_CP006568.1 Protein Homology CDS 3883350 3884867 . - 0 ID=cds3879;Parent=gene3931;Dbxref=Genbank:WP_025246554.1;Name=WP_025246554.1;gbkey=CDS;product=transposase;protein_id=WP_025246554.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3885131 3886453 . + . ID=id579;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3885206 3886414 . + . ID=gene3932;Name=SOPEG_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19285;old_locus_tag=SOPEG_3581 NZ_CP006568.1 Protein Homology CDS 3885206 3886414 . + 0 ID=cds3880;Parent=gene3932;Dbxref=Genbank:WP_025246555.1;Name=WP_025246555.1;gbkey=CDS;product=transposase;protein_id=WP_025246555.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3886487 3887455 . + . ID=gene3933;Name=SOPEG_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19290 NZ_CP006568.1 Protein Homology CDS 3886487 3887455 . + 0 ID=cds3881;Parent=gene3933;Dbxref=Genbank:WP_025246556.1;Name=WP_025246556.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246556.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3887462 3887926 . + . ID=gene3934;Name=SOPEG_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19295;old_locus_tag=SOPEG_3583 NZ_CP006568.1 Protein Homology CDS 3887462 3887926 . + 0 ID=cds3882;Parent=gene3934;Dbxref=Genbank:WP_025246557.1;Name=WP_025246557.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_025246557.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3887923 3889014 . + . ID=gene3935;Name=SOPEG_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19300;old_locus_tag=SOPEG_3584 NZ_CP006568.1 Protein Homology CDS 3887923 3889014 . + 0 ID=cds3883;Parent=gene3935;Dbxref=Genbank:WP_025246558.1;Name=WP_025246558.1;gbkey=CDS;product=late control protein D;protein_id=WP_025246558.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3889502 3893722 . - . ID=gene3936;Name=SOPEG_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19305;old_locus_tag=SOPEG_3586 NZ_CP006568.1 Protein Homology CDS 3889502 3893722 . - 0 ID=cds3884;Parent=gene3936;Dbxref=Genbank:WP_025246559.1;Name=WP_025246559.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_025246559.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3893813 3897841 . - . ID=gene3937;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SOPEG_RS19310;old_locus_tag=SOPEG_3587 NZ_CP006568.1 Protein Homology CDS 3893813 3897841 . - 0 ID=cds3885;Parent=gene3937;Dbxref=Genbank:WP_025246560.1;Name=WP_025246560.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_025246560.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3898166 3898534 . - . ID=gene3938;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SOPEG_RS19315;old_locus_tag=SOPEG_3588 NZ_CP006568.1 Protein Homology CDS 3898166 3898534 . - 0 ID=cds3886;Parent=gene3938;Dbxref=Genbank:WP_025246561.1;Name=WP_025246561.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_025246561.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3898601 3899101 . - . ID=gene3939;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SOPEG_RS19320;old_locus_tag=SOPEG_3589 NZ_CP006568.1 Protein Homology CDS 3898601 3899101 . - 0 ID=cds3887;Parent=gene3939;Dbxref=Genbank:WP_025246562.1;Name=WP_025246562.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_025246562.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3899411 3900115 . - . ID=gene3940;Name=SOPEG_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19325;old_locus_tag=SOPEG_3590 NZ_CP006568.1 Protein Homology CDS 3899411 3900115 . - 0 ID=cds3888;Parent=gene3940;Dbxref=Genbank:WP_025246563.1;Name=WP_025246563.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_025246563.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3900119 3900547 . - . ID=gene3941;Name=SOPEG_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19330;old_locus_tag=SOPEG_3591 NZ_CP006568.1 Protein Homology CDS 3900119 3900547 . - 0 ID=cds3889;Parent=gene3941;Dbxref=Genbank:WP_025246564.1;Name=WP_025246564.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_025246564.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3900696 3901241 . - . ID=gene3942;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SOPEG_RS19335;old_locus_tag=SOPEG_3592 NZ_CP006568.1 Protein Homology CDS 3900696 3901241 . - 0 ID=cds3890;Parent=gene3942;Dbxref=Genbank:WP_009639145.1;Name=WP_009639145.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination factor NusG;protein_id=WP_009639145.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3901243 3901626 . - . ID=gene3943;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SOPEG_RS19340;old_locus_tag=SOPEG_3593 NZ_CP006568.1 Protein Homology CDS 3901243 3901626 . - 0 ID=cds3891;Parent=gene3943;Dbxref=Genbank:WP_025246565.1;Name=WP_025246565.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_025246565.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3901890 3903074 . - . ID=gene3944;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SOPEG_RS19345;old_locus_tag=SOPEG_3594 NZ_CP006568.1 Protein Homology CDS 3901890 3903074 . - 0 ID=cds3892;Parent=gene3944;Dbxref=Genbank:WP_025246566.1;Name=WP_025246566.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_025246566.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3901895 3903073 . + . ID=id580;gbkey=repeat_region;gene=tuf NZ_CP006568.1 RefSeq gene 3903184 3903259 . - . ID=gene3945;Name=SOPEG_RS19350;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19350;old_locus_tag=SOPEG_t3595 NZ_CP006568.1 tRNAscan-SE tRNA 3903184 3903259 . - . ID=rna52;Parent=gene3945;anticodon=(pos:complement(3903224..3903226));gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 tRNAscan-SE exon 3903184 3903259 . - . ID=id581;Parent=rna52;anticodon=(pos:complement(3903224..3903226));gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 RefSeq gene 3903264 3903338 . - . ID=gene3946;Name=SOPEG_RS19355;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19355;old_locus_tag=SOPEG_t3596 NZ_CP006568.1 tRNAscan-SE tRNA 3903264 3903338 . - . ID=rna53;Parent=gene3946;anticodon=(pos:complement(3903303..3903305));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 tRNAscan-SE exon 3903264 3903338 . - . ID=id582;Parent=rna53;anticodon=(pos:complement(3903303..3903305));gbkey=tRNA;product=tRNA-Gly NZ_CP006568.1 RefSeq gene 3903519 3903603 . - . ID=gene3947;Name=SOPEG_RS19360;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19360;old_locus_tag=SOPEG_t3597 NZ_CP006568.1 tRNAscan-SE tRNA 3903519 3903603 . - . ID=rna54;Parent=gene3947;anticodon=(pos:complement(3903567..3903569));gbkey=tRNA;product=tRNA-Tyr NZ_CP006568.1 tRNAscan-SE exon 3903519 3903603 . - . ID=id583;Parent=rna54;anticodon=(pos:complement(3903567..3903569));gbkey=tRNA;product=tRNA-Tyr NZ_CP006568.1 RefSeq gene 3903613 3903688 . - . ID=gene3948;Name=SOPEG_RS19365;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19365;old_locus_tag=SOPEG_t3598 NZ_CP006568.1 tRNAscan-SE tRNA 3903613 3903688 . - . ID=rna55;Parent=gene3948;anticodon=(pos:complement(3903653..3903655));gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 tRNAscan-SE exon 3903613 3903688 . - . ID=id584;Parent=rna55;anticodon=(pos:complement(3903653..3903655));gbkey=tRNA;product=tRNA-Thr NZ_CP006568.1 RefSeq gene 3904094 3905044 . + . ID=gene3949;Name=SOPEG_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19370;old_locus_tag=SOPEG_3599 NZ_CP006568.1 Protein Homology CDS 3904094 3905044 . + 0 ID=cds3893;Parent=gene3949;Dbxref=Genbank:WP_025246567.1;Name=WP_025246567.1;gbkey=CDS;product=type I pantothenate kinase;protein_id=WP_025246567.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3905472 3906173 . + . ID=gene3950;Name=SOPEG_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19375;old_locus_tag=SOPEG_3600 NZ_CP006568.1 Protein Homology CDS 3905472 3906173 . + 0 ID=cds3894;Parent=gene3950;Dbxref=Genbank:WP_025246568.1;Name=WP_025246568.1;Note=peptidase E%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family;gbkey=CDS;product=(alpha)-aspartyl dipeptidase;protein_id=WP_025246568.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3906282 3907241 . - . ID=gene3951;Name=SOPEG_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19380;old_locus_tag=SOPEG_3601 NZ_CP006568.1 Protein Homology CDS 3906282 3907241 . - 0 ID=cds3895;Parent=gene3951;Dbxref=Genbank:WP_025246569.1;Name=WP_025246569.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_025246569.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3907238 3908272 . - . ID=gene3952;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SOPEG_RS19385;old_locus_tag=SOPEG_3602 NZ_CP006568.1 Protein Homology CDS 3907238 3908272 . - 0 ID=cds3896;Parent=gene3952;Dbxref=Genbank:WP_025246570.1;Name=WP_025246570.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_025246570.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3908393 3909226 . - . ID=gene3953;Name=SOPEG_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19390 NZ_CP006568.1 GeneMarkS+ CDS 3908393 3909226 . - 0 ID=cds3897;Parent=gene3953;Dbxref=Genbank:WP_025246571.1;Name=WP_025246571.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246571.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3909557 3913180 . + . ID=id585;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3909632 3909984 . + . ID=gene3954;Name=SOPEG_RS19395;end_range=3909984,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19395;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3909632 3909984 . + 0 ID=cds3898;Parent=gene3954;end_range=3909984,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_except=(pos:3909644..3909646%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3910624 3910842 . + . ID=gene3955;Name=SOPEG_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19400 NZ_CP006568.1 Protein Homology CDS 3910624 3910842 . + 0 ID=cds3899;Parent=gene3955;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3910934 3911009 . - . ID=gene3956;Name=SOPEG_RS19405;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19405;old_locus_tag=SOPEG_t3604 NZ_CP006568.1 tRNAscan-SE tRNA 3910934 3911009 . - . ID=rna56;Parent=gene3956;anticodon=(pos:complement(3910974..3910976));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 tRNAscan-SE exon 3910934 3911009 . - . ID=id586;Parent=rna56;anticodon=(pos:complement(3910974..3910976));gbkey=tRNA;product=tRNA-Ala NZ_CP006568.1 RefSeq gene 3911205 3911281 . - . ID=gene3957;Name=SOPEG_RS19410;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS19410;old_locus_tag=SOPEG_t3605 NZ_CP006568.1 tRNAscan-SE tRNA 3911205 3911281 . - . ID=rna57;Parent=gene3957;anticodon=(pos:complement(3911245..3911247));gbkey=tRNA;product=tRNA-Ile NZ_CP006568.1 tRNAscan-SE exon 3911205 3911281 . - . ID=id587;Parent=rna57;anticodon=(pos:complement(3911245..3911247));gbkey=tRNA;product=tRNA-Ile NZ_CP006568.1 RefSeq gene 3911352 3912898 . - . ID=gene3958;Name=SOPEG_RS19415;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS19415;old_locus_tag=SOPEG_r3606 NZ_CP006568.1 RefSeq rRNA 3911352 3912898 . - . ID=rna58;Parent=gene3958;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq exon 3911352 3912898 . - . ID=id588;Parent=rna58;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq gene 3913256 3913795 . - . ID=gene3959;Name=SOPEG_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19420;old_locus_tag=SOPEG_3607 NZ_CP006568.1 Protein Homology CDS 3913256 3913795 . - 0 ID=cds3900;Parent=gene3959;Dbxref=Genbank:WP_025246572.1;Name=WP_025246572.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_025246572.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3913809 3915260 . - . ID=gene3960;Name=SOPEG_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19425;old_locus_tag=SOPEG_3608 NZ_CP006568.1 Protein Homology CDS 3913809 3915260 . - 0 ID=cds3901;Parent=gene3960;Dbxref=Genbank:WP_025246573.1;Name=WP_025246573.1;gbkey=CDS;product=potassium transporter;protein_id=WP_025246573.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3915304 3915921 . - . ID=gene3961;Name=SOPEG_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19430;old_locus_tag=SOPEG_3609 NZ_CP006568.1 Protein Homology CDS 3915304 3915921 . - 0 ID=cds3902;Parent=gene3961;Dbxref=Genbank:WP_025246574.1;Name=WP_025246574.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246574.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3915918 3917236 . - . ID=gene3962;Name=SOPEG_RS19435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19435;pseudo=true NZ_CP006568.1 Protein Homology CDS 3915918 3917236 . - 0 ID=cds3903;Parent=gene3962;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;exception=annotated by transcript or proteomic data;gbkey=CDS;product=proline dipeptidase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3917374 3918075 . - . ID=gene3963;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=SOPEG_RS19440;old_locus_tag=SOPEG_3611 NZ_CP006568.1 Protein Homology CDS 3917374 3918075 . - 0 ID=cds3904;Parent=gene3963;Dbxref=Genbank:WP_025246575.1;Name=WP_025246575.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_025246575.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3918126 3919610 . - . ID=gene3964;Name=SOPEG_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19445;old_locus_tag=SOPEG_3612 NZ_CP006568.1 Protein Homology CDS 3918126 3919610 . - 0 ID=cds3905;Parent=gene3964;Dbxref=Genbank:WP_025246576.1;Name=WP_025246576.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_025246576.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3919792 3920283 . + . ID=gene3965;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=SOPEG_RS19450;old_locus_tag=SOPEG_3613 NZ_CP006568.1 Protein Homology CDS 3919792 3920283 . + 0 ID=cds3906;Parent=gene3965;Dbxref=Genbank:WP_025246577.1;Name=WP_025246577.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_025246577.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3920402 3921172 . - . ID=gene3966;Name=SOPEG_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19455;old_locus_tag=SOPEG_3614 NZ_CP006568.1 Protein Homology CDS 3920402 3921172 . - 0 ID=cds3907;Parent=gene3966;Dbxref=Genbank:WP_025246578.1;Name=WP_025246578.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_025246578.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3921176 3921739 . - . ID=gene3967;Name=SOPEG_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19460;old_locus_tag=SOPEG_3615 NZ_CP006568.1 Protein Homology CDS 3921176 3921739 . - 0 ID=cds3908;Parent=gene3967;Dbxref=Genbank:WP_025246579.1;Name=WP_025246579.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246579.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3921743 3922009 . - . ID=gene3968;Name=SOPEG_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19465;old_locus_tag=SOPEG_3616 NZ_CP006568.1 Protein Homology CDS 3921743 3922009 . - 0 ID=cds3909;Parent=gene3968;Dbxref=Genbank:WP_025246580.1;Name=WP_025246580.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_025246580.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3922060 3923694 . - . ID=gene3969;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=SOPEG_RS19470;old_locus_tag=SOPEG_3617 NZ_CP006568.1 Protein Homology CDS 3922060 3923694 . - 0 ID=cds3910;Parent=gene3969;Dbxref=Genbank:WP_025246581.1;Name=WP_025246581.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=ubiquinone biosynthesis protein UbiB;protein_id=WP_025246581.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3923691 3924299 . - . ID=gene3970;Name=SOPEG_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19475;old_locus_tag=SOPEG_3618 NZ_CP006568.1 Protein Homology CDS 3923691 3924299 . - 0 ID=cds3911;Parent=gene3970;Dbxref=Genbank:WP_025246582.1;Name=WP_025246582.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246582.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3924312 3925070 . - . ID=gene3971;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=SOPEG_RS19480;old_locus_tag=SOPEG_3619 NZ_CP006568.1 Protein Homology CDS 3924312 3925070 . - 0 ID=cds3912;Parent=gene3971;Dbxref=Genbank:WP_025246583.1;Name=WP_025246583.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone biosynthesis methyltransferase UbiE;protein_id=WP_025246583.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3925142 3926752 . - . ID=gene3972;Name=SOPEG_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19485;old_locus_tag=SOPEG_3620 NZ_CP006568.1 Protein Homology CDS 3925142 3926752 . - 0 ID=cds3913;Parent=gene3972;Dbxref=Genbank:WP_025246584.1;Name=WP_025246584.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_025246584.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3926819 3927343 . - . ID=gene3973;Name=SOPEG_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19490;old_locus_tag=SOPEG_3621 NZ_CP006568.1 Protein Homology CDS 3926819 3927343 . - 0 ID=cds3914;Parent=gene3973;Dbxref=Genbank:WP_025246585.1;Name=WP_025246585.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_025246585.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3927542 3928309 . - . ID=gene3974;Name=SOPEG_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19495;old_locus_tag=SOPEG_3622 NZ_CP006568.1 Protein Homology CDS 3927542 3928309 . - 0 ID=cds3915;Parent=gene3974;Dbxref=Genbank:WP_025246586.1;Name=WP_025246586.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_025246586.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3928559 3929383 . + . ID=gene3975;Name=SOPEG_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19500;old_locus_tag=SOPEG_3623 NZ_CP006568.1 Protein Homology CDS 3928559 3929383 . + 0 ID=cds3916;Parent=gene3975;Dbxref=Genbank:WP_025246587.1;Name=WP_025246587.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_025246587.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3929440 3929640 . + . ID=gene3976;Name=SOPEG_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19505 NZ_CP006568.1 GeneMarkS+ CDS 3929440 3929640 . + 0 ID=cds3917;Parent=gene3976;Dbxref=Genbank:WP_025246588.1;Name=WP_025246588.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246588.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3929746 3932002 . - . ID=gene3977;Name=SOPEG_RS19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19510;pseudo=true NZ_CP006568.1 Protein Homology CDS 3929746 3932002 . - 0 ID=cds3918;Parent=gene3977;exception=annotated by transcript or proteomic data;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;pseudo=true;transl_except=(pos:complement(3930598..3930600)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3932105 3933015 . + . ID=gene3978;Name=SOPEG_RS19515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19515;pseudo=true NZ_CP006568.1 Protein Homology CDS 3932105 3933015 . + 0 ID=cds3919;Parent=gene3978;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_except=(pos:3932662..3932664%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3933378 3934238 . - . ID=gene3979;Name=SOPEG_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23455;old_locus_tag=SOPEG_3626 NZ_CP006568.1 Protein Homology CDS 3933378 3934238 . - 0 ID=cds3920;Parent=gene3979;Dbxref=Genbank:WP_025246592.1;Name=WP_025246592.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246592.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3935343 3936224 . - . ID=gene3980;Name=SOPEG_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19525;old_locus_tag=SOPEG_3627 NZ_CP006568.1 Protein Homology CDS 3935343 3936224 . - 0 ID=cds3921;Parent=gene3980;Dbxref=Genbank:WP_025246593.1;Name=WP_025246593.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246593.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3936406 3938115 . - . ID=gene3981;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=SOPEG_RS19530;old_locus_tag=SOPEG_3628 NZ_CP006568.1 Protein Homology CDS 3936406 3938115 . - 0 ID=cds3922;Parent=gene3981;Dbxref=Genbank:WP_038470540.1;Name=WP_038470540.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;gbkey=CDS;gene=ggt;product=gamma-glutamyltranspeptidase;protein_id=WP_038470540.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3938297 3938563 . + . ID=gene3982;Name=SOPEG_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19535 NZ_CP006568.1 Protein Homology CDS 3938297 3938563 . + 0 ID=cds3923;Parent=gene3982;Dbxref=Genbank:WP_038469101.1;Name=WP_038469101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469101.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3938691 3939366 . - . ID=gene3983;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=pseudogene;locus_tag=SOPEG_RS19540;pseudo=true NZ_CP006568.1 Protein Homology CDS 3938691 3939366 . - 0 ID=cds3924;Parent=gene3983;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3939363 3940586 . - . ID=gene3984;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=pseudogene;locus_tag=SOPEG_RS19545;pseudo=true NZ_CP006568.1 Protein Homology CDS 3939363 3940586 . - 0 ID=cds3925;Parent=gene3984;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=glycerol-3-phosphate transporter ATP-binding subunit;pseudo=true;transl_except=(pos:complement(3939828..3939830)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3940593 3940868 . - . ID=gene3985;Name=SOPEG_RS19550;end_range=3940868,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19550;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3940593 3940868 . - 0 ID=cds3926;Parent=gene3985;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;end_range=3940868,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glycerol-3-phosphate transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3941013 3941288 . - . ID=gene3986;Name=SOPEG_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19555 NZ_CP006568.1 Protein Homology CDS 3941013 3941288 . - 0 ID=cds3927;Parent=gene3986;Dbxref=Genbank:WP_051419935.1;Name=WP_051419935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3941307 3942233 . - . ID=gene3987;Name=SOPEG_RS19560;end_range=3942233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19560;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3941307 3942233 . - 0 ID=cds3928;Parent=gene3987;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;end_range=3942233,.;gbkey=CDS;partial=true;product=glycerol-3-phosphate ABC transporter substrate-binding protein;pseudo=true;transl_except=(pos:complement(3941373..3941375)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3942254 3946164 . + . ID=id589;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3942343 3943551 . + . ID=gene3988;Name=SOPEG_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19565;old_locus_tag=SOPEG_3633 NZ_CP006568.1 Protein Homology CDS 3942343 3943551 . + 0 ID=cds3929;Parent=gene3988;Dbxref=Genbank:WP_038469104.1;Name=WP_038469104.1;gbkey=CDS;product=transposase;protein_id=WP_038469104.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3943679 3944427 . - . ID=gene3989;Name=SOPEG_RS19570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19570;pseudo=true NZ_CP006568.1 Protein Homology CDS 3943679 3944427 . - 0 ID=cds3930;Parent=gene3989;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3943969..3943971)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3944439 3945956 . - . ID=gene3990;Name=SOPEG_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19575;old_locus_tag=SOPEG_3635 NZ_CP006568.1 Protein Homology CDS 3944439 3945956 . - 0 ID=cds3931;Parent=gene3990;Dbxref=Genbank:WP_025246599.1;Name=WP_025246599.1;gbkey=CDS;product=transposase;protein_id=WP_025246599.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3946083 3946598 . - . ID=gene3991;Name=SOPEG_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19580 NZ_CP006568.1 Protein Homology CDS 3946083 3946598 . - 0 ID=cds3932;Parent=gene3991;Dbxref=Genbank:WP_038469107.1;Name=WP_038469107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469107.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3946793 3947191 . + . ID=gene3992;Name=SOPEG_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19585;old_locus_tag=SOPEG_3636 NZ_CP006568.1 Protein Homology CDS 3946793 3947191 . + 0 ID=cds3933;Parent=gene3992;Dbxref=Genbank:WP_025246601.1;Name=WP_025246601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246601.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3947507 3948364 . - . ID=gene3993;Name=SOPEG_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19590;old_locus_tag=SOPEG_3637 NZ_CP006568.1 Protein Homology CDS 3947507 3948364 . - 0 ID=cds3934;Parent=gene3993;Dbxref=Genbank:WP_025246602.1;Name=WP_025246602.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_025246602.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3948521 3949480 . - . ID=gene3994;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SOPEG_RS19595;old_locus_tag=SOPEG_3638 NZ_CP006568.1 Protein Homology CDS 3948521 3949480 . - 0 ID=cds3935;Parent=gene3994;Dbxref=Genbank:WP_038470546.1;Name=WP_038470546.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_038470546.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3949527 3950195 . - . ID=gene3995;Name=SOPEG_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19600;old_locus_tag=SOPEG_3639 NZ_CP006568.1 Protein Homology CDS 3949527 3950195 . - 0 ID=cds3936;Parent=gene3995;Dbxref=Genbank:WP_025246604.1;Name=WP_025246604.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_025246604.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3950202 3951656 . - . ID=gene3996;Name=SOPEG_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19605;old_locus_tag=SOPEG_3640 NZ_CP006568.1 Protein Homology CDS 3950202 3951656 . - 0 ID=cds3937;Parent=gene3996;Dbxref=Genbank:WP_025246605.1;Name=WP_025246605.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_025246605.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3951886 3952491 . + . ID=gene3997;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=SOPEG_RS19610;old_locus_tag=SOPEG_3641 NZ_CP006568.1 Protein Homology CDS 3951886 3952491 . + 0 ID=cds3938;Parent=gene3997;Dbxref=Genbank:WP_025246606.1;Name=WP_025246606.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_025246606.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3952481 3952768 . + . ID=gene3998;Name=SOPEG_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19615 NZ_CP006568.1 Protein Homology CDS 3952481 3952768 . + 0 ID=cds3939;Parent=gene3998;Dbxref=Genbank:WP_025246607.1;Name=WP_025246607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246607.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3952844 3953164 . - . ID=gene3999;Name=SOPEG_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19620;old_locus_tag=SOPEG_3643 NZ_CP006568.1 Protein Homology CDS 3952844 3953164 . - 0 ID=cds3940;Parent=gene3999;Dbxref=Genbank:WP_025246608.1;Name=WP_025246608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246608.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3953370 3953990 . + . ID=gene4000;Name=SOPEG_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19625;old_locus_tag=SOPEG_3644 NZ_CP006568.1 Protein Homology CDS 3953370 3953990 . + 0 ID=cds3941;Parent=gene4000;Dbxref=Genbank:WP_025246609.1;Name=WP_025246609.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246609.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3954018 3954272 . - . ID=gene4001;Name=SOPEG_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19630;old_locus_tag=SOPEG_3645 NZ_CP006568.1 Protein Homology CDS 3954018 3954272 . - 0 ID=cds3942;Parent=gene4001;Dbxref=Genbank:WP_025246610.1;Name=WP_025246610.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfur transfer protein SirA;protein_id=WP_025246610.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3954669 3955713 . - . ID=gene4002;Name=SOPEG_RS19635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19635;partial=true;pseudo=true;start_range=.,3954669 NZ_CP006568.1 Protein Homology CDS 3954669 3955713 . - 0 ID=cds3943;Parent=gene4002;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3954669;transl_except=(pos:complement(3955294..3955296)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3956016 3956984 . - . ID=gene4003;Name=SOPEG_RS19640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19640;pseudo=true NZ_CP006568.1 Protein Homology CDS 3956016 3956984 . - 0 ID=cds3944;Parent=gene4003;exception=annotated by transcript or proteomic data;gbkey=CDS;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3957314 3957703 . + . ID=gene4004;Name=SOPEG_RS19645;end_range=3957703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19645;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3957314 3957703 . + 0 ID=cds3945;Parent=gene4004;end_range=3957703,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutathione S-transferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3957710 3959031 . + . ID=id590;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3957748 3958956 . - . ID=gene4005;Name=SOPEG_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19650;old_locus_tag=SOPEG_3649 NZ_CP006568.1 Protein Homology CDS 3957748 3958956 . - 0 ID=cds3946;Parent=gene4005;Dbxref=Genbank:WP_025246612.1;Name=WP_025246612.1;gbkey=CDS;product=transposase;protein_id=WP_025246612.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3959293 3961639 . + . ID=id591;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3959373 3960266 . + . ID=gene4006;Name=SOPEG_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19655 NZ_CP006568.1 Protein Homology CDS 3959373 3960266 . + 0 ID=cds3947;Parent=gene4006;Dbxref=Genbank:WP_025246613.1;Name=WP_025246613.1;gbkey=CDS;product=transposase;protein_id=WP_025246613.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3960391 3961602 . + . ID=gene4007;Name=SOPEG_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19660;old_locus_tag=SOPEG_3652 NZ_CP006568.1 Protein Homology CDS 3960391 3961602 . + 0 ID=cds3948;Parent=gene4007;Dbxref=Genbank:WP_025246614.1;Name=WP_025246614.1;gbkey=CDS;product=transposase;protein_id=WP_025246614.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3961593 3961796 . - . ID=gene4008;Name=SOPEG_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19665 NZ_CP006568.1 Protein Homology CDS 3961593 3961796 . - 0 ID=cds3949;Parent=gene4008;Dbxref=Genbank:WP_025246615.1;Name=WP_025246615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246615.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3962437 3963045 . - . ID=gene4009;Name=SOPEG_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19670;old_locus_tag=SOPEG_3653 NZ_CP006568.1 Protein Homology CDS 3962437 3963045 . - 0 ID=cds3950;Parent=gene4009;Dbxref=Genbank:WP_025246616.1;Name=WP_025246616.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_025246616.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3963054 3964790 . + . ID=id592;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3963491 3964711 . - . ID=gene4010;Name=SOPEG_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19675;old_locus_tag=SOPEG_3654 NZ_CP006568.1 Protein Homology CDS 3963491 3964711 . - 0 ID=cds3951;Parent=gene4010;Dbxref=Genbank:WP_025246617.1;Name=WP_025246617.1;gbkey=CDS;product=transposase;protein_id=WP_025246617.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3965138 3967597 . + . ID=gene4011;Name=SOPEG_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19680;old_locus_tag=SOPEG_3655 NZ_CP006568.1 Protein Homology CDS 3965138 3967597 . + 0 ID=cds3952;Parent=gene4011;Dbxref=Genbank:WP_025246618.1;Name=WP_025246618.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_025246618.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3967731 3968603 . - . ID=gene4012;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=SOPEG_RS19685;old_locus_tag=SOPEG_3656 NZ_CP006568.1 Protein Homology CDS 3967731 3968603 . - 0 ID=cds3953;Parent=gene4012;Dbxref=Genbank:WP_025246619.1;Name=WP_025246619.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate polyprenyltransferase;protein_id=WP_025246619.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3968619 3969065 . - . ID=gene4013;Name=SOPEG_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19690 NZ_CP006568.1 Protein Homology CDS 3968619 3969065 . - 0 ID=cds3954;Parent=gene4013;Dbxref=Genbank:WP_025246620.1;Name=WP_025246620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246620.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3969479 3970800 . + . ID=id593;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3969559 3969840 . + . ID=gene4014;Name=SOPEG_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19695 NZ_CP006568.1 Protein Homology CDS 3969559 3969840 . + 0 ID=cds3955;Parent=gene4014;Dbxref=Genbank:WP_025246621.1;Name=WP_025246621.1;gbkey=CDS;product=transposase;protein_id=WP_025246621.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3969837 3970082 . + . ID=gene4015;Name=SOPEG_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19700 NZ_CP006568.1 Protein Homology CDS 3969837 3970082 . + 0 ID=cds3956;Parent=gene4015;Dbxref=Genbank:WP_025246622.1;Name=WP_025246622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246622.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3970152 3970478 . - . ID=gene4016;Name=SOPEG_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23460 NZ_CP006568.1 GeneMarkS+ CDS 3970152 3970478 . - 0 ID=cds3957;Parent=gene4016;Dbxref=Genbank:WP_051419936.1;Name=WP_051419936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419936.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3970677 3971819 . - . ID=gene4017;Name=SOPEG_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23465 NZ_CP006568.1 Protein Homology CDS 3970677 3971819 . - 0 ID=cds3958;Parent=gene4017;Dbxref=Genbank:WP_051419937.1;Name=WP_051419937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419937.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3972239 3972709 . - . ID=gene4018;Name=SOPEG_RS23470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23470;partial=true;pseudo=true;start_range=.,3972239 NZ_CP006568.1 Protein Homology CDS 3972239 3972709 . - 0 ID=cds3959;Parent=gene4018;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3972239;transl_except=(pos:complement(3972353..3972355)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3972709 3973464 . - . ID=gene4019;Name=SOPEG_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19715;old_locus_tag=SOPEG_3660 NZ_CP006568.1 Protein Homology CDS 3972709 3973464 . - 0 ID=cds3960;Parent=gene4019;Dbxref=Genbank:WP_025246624.1;Name=WP_025246624.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246624.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3973461 3974108 . - . ID=gene4020;Name=SOPEG_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19720 NZ_CP006568.1 Protein Homology CDS 3973461 3974108 . - 0 ID=cds3961;Parent=gene4020;Dbxref=Genbank:WP_025246625.1;Name=WP_025246625.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246625.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3974181 3974402 . - . ID=gene4021;Name=SOPEG_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19725 NZ_CP006568.1 Protein Homology CDS 3974181 3974402 . - 0 ID=cds3962;Parent=gene4021;Dbxref=Genbank:WP_051420013.1;Name=WP_051420013.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420013.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3974989 3976638 . - . ID=gene4022;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SOPEG_RS19730;old_locus_tag=SOPEG_3663 NZ_CP006568.1 Protein Homology CDS 3974989 3976638 . - 0 ID=cds3963;Parent=gene4022;Dbxref=Genbank:WP_025246627.1;Name=WP_025246627.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_025246627.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3976656 3976847 . + . ID=gene4023;Name=SOPEG_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19735 NZ_CP006568.1 GeneMarkS+ CDS 3976656 3976847 . + 0 ID=cds3964;Parent=gene4023;Dbxref=Genbank:WP_038469112.1;Name=WP_038469112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469112.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3977230 3978499 . + . ID=gene4024;Name=SOPEG_RS19740;end_range=3978499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19740;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 3977230 3978499 . + 0 ID=cds3965;Parent=gene4024;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;end_range=3978499,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=aspartate kinase;pseudo=true;transl_except=(pos:3977761..3977763%2Caa:Other),(pos:3977776..3977778%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3978701 3980345 . - . ID=gene4025;Name=SOPEG_RS23475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23475;old_locus_tag=SOPEG_ps3665;pseudo=true NZ_CP006568.1 Protein Homology CDS 3978701 3980345 . - 0 ID=cds3966;Parent=gene4025;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3980428 3981420 . - . ID=gene4026;Name=SOPEG_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19755;old_locus_tag=SOPEG_3666 NZ_CP006568.1 Protein Homology CDS 3980428 3981420 . - 0 ID=cds3967;Parent=gene4026;Dbxref=Genbank:WP_025246629.1;Name=WP_025246629.1;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_025246629.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3981423 3982211 . - . ID=gene4027;Name=SOPEG_RS19760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19760;pseudo=true NZ_CP006568.1 Protein Homology CDS 3981423 3982211 . - 0 ID=cds3968;Parent=gene4027;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3982230 3983051 . - . ID=gene4028;Name=SOPEG_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19765;old_locus_tag=SOPEG_3668 NZ_CP006568.1 Protein Homology CDS 3982230 3983051 . - 0 ID=cds3969;Parent=gene4028;Dbxref=Genbank:WP_025246630.1;Name=WP_025246630.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246630.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3983048 3983843 . - . ID=gene4029;Name=SOPEG_RS19770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19770;pseudo=true NZ_CP006568.1 Protein Homology CDS 3983048 3983843 . - 0 ID=cds3970;Parent=gene4029;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nucleotide pyrophosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 3984012 3985013 . - . ID=gene4030;Name=SOPEG_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19775;old_locus_tag=SOPEG_3670 NZ_CP006568.1 Protein Homology CDS 3984012 3985013 . - 0 ID=cds3971;Parent=gene4030;Dbxref=Genbank:WP_025246631.1;Name=WP_025246631.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_025246631.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3985109 3985555 . + . ID=gene4031;Name=SOPEG_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23480 NZ_CP006568.1 Protein Homology CDS 3985109 3985555 . + 0 ID=cds3972;Parent=gene4031;Dbxref=Genbank:WP_051419938.1;Name=WP_051419938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419938.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3985539 3985913 . + . ID=gene4032;Name=SOPEG_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23485 NZ_CP006568.1 Protein Homology CDS 3985539 3985913 . + 0 ID=cds3973;Parent=gene4032;Dbxref=Genbank:WP_051419939.1;Name=WP_051419939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419939.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3985807 3988307 . + . ID=id594;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3986099 3987154 . + . ID=gene4033;Name=SOPEG_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19785 NZ_CP006568.1 Protein Homology CDS 3986099 3987154 . + 0 ID=cds3974;Parent=gene4033;Dbxref=Genbank:WP_051419940.1;Name=WP_051419940.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419940.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3987491 3988240 . + . ID=gene4034;Name=SOPEG_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19790;old_locus_tag=SOPEG_3673 NZ_CP006568.1 Protein Homology CDS 3987491 3988240 . + 0 ID=cds3975;Parent=gene4034;Dbxref=Genbank:WP_025246632.1;Name=WP_025246632.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246632.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3988316 3989653 . + . ID=id595;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3988369 3989361 . - . ID=gene4035;Name=SOPEG_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19795 NZ_CP006568.1 Protein Homology CDS 3988369 3989361 . - 0 ID=cds3976;Parent=gene4035;Dbxref=Genbank:WP_038469115.1;Name=WP_038469115.1;gbkey=CDS;product=transposase;protein_id=WP_038469115.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3989312 3989578 . - . ID=gene4036;Name=SOPEG_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19800 NZ_CP006568.1 Protein Homology CDS 3989312 3989578 . - 0 ID=cds3977;Parent=gene4036;Dbxref=Genbank:WP_038469119.1;Name=WP_038469119.1;gbkey=CDS;product=transposase;protein_id=WP_038469119.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3990046 3990813 . - . ID=gene4037;Name=SOPEG_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19805;old_locus_tag=SOPEG_3675 NZ_CP006568.1 Protein Homology CDS 3990046 3990813 . - 0 ID=cds3978;Parent=gene4037;Dbxref=Genbank:WP_025246633.1;Name=WP_025246633.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_025246633.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3990989 3991459 . - . ID=gene4038;Name=SOPEG_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23490;old_locus_tag=SOPEG_ps3676 NZ_CP006568.1 Protein Homology CDS 3990989 3991459 . - 0 ID=cds3979;Parent=gene4038;Dbxref=Genbank:WP_025246634.1;Name=WP_025246634.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246634.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3991449 3991760 . - . ID=gene4039;Name=SOPEG_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19815 NZ_CP006568.1 Protein Homology CDS 3991449 3991760 . - 0 ID=cds3980;Parent=gene4039;Dbxref=Genbank:WP_025246635.1;Name=WP_025246635.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246635.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3991770 3995645 . + . ID=id596;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3991848 3993056 . + . ID=gene4040;Name=SOPEG_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19820;old_locus_tag=SOPEG_3678 NZ_CP006568.1 Protein Homology CDS 3991848 3993056 . + 0 ID=cds3981;Parent=gene4040;Dbxref=Genbank:WP_025246636.1;Name=WP_025246636.1;gbkey=CDS;product=transposase;protein_id=WP_025246636.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3993192 3993941 . - . ID=gene4041;Name=SOPEG_RS19825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19825;pseudo=true NZ_CP006568.1 Protein Homology CDS 3993192 3993941 . - 0 ID=cds3982;Parent=gene4041;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(3993759..3993761)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 3993953 3995188 . - . ID=gene4042;Name=SOPEG_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19830 NZ_CP006568.1 Protein Homology CDS 3993953 3995188 . - 0 ID=cds3983;Parent=gene4042;Dbxref=Genbank:WP_051420014.1;Name=WP_051420014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051420014.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3995616 3996053 . - . ID=gene4043;Name=SOPEG_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23495 NZ_CP006568.1 Protein Homology CDS 3995616 3996053 . - 0 ID=cds3984;Parent=gene4043;Dbxref=Genbank:WP_025246638.1;Name=WP_025246638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246638.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3996056 3997115 . + . ID=id597;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3996136 3996867 . + . ID=gene4044;Name=SOPEG_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19840 NZ_CP006568.1 Protein Homology CDS 3996136 3996867 . + 0 ID=cds3985;Parent=gene4044;Dbxref=Genbank:WP_025246639.1;Name=WP_025246639.1;gbkey=CDS;product=transposase;protein_id=WP_025246639.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3996913 3997053 . + . ID=gene4045;Name=SOPEG_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19845 NZ_CP006568.1 Protein Homology CDS 3996913 3997053 . + 0 ID=cds3986;Parent=gene4045;Dbxref=Genbank:WP_038468066.1;Name=WP_038468066.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038468066.1;transl_table=11 NZ_CP006568.1 RefSeq gene 3997099 3997503 . - . ID=gene4046;Name=SOPEG_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19850 NZ_CP006568.1 Protein Homology CDS 3997099 3997503 . - 0 ID=cds3987;Parent=gene4046;Dbxref=Genbank:WP_025246640.1;Name=WP_025246640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246640.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 3997754 3998809 . + . ID=id598;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 3997833 3998750 . + . ID=gene4047;Name=SOPEG_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19855;old_locus_tag=SOPEG_3683 NZ_CP006568.1 Protein Homology CDS 3997833 3998750 . + 0 ID=cds3988;Parent=gene4047;Dbxref=Genbank:WP_025246641.1;Name=WP_025246641.1;gbkey=CDS;product=transposase;protein_id=WP_025246641.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4000276 4001940 . + . ID=id599;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4000656 4000826 . - . ID=gene4048;Name=SOPEG_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19860 NZ_CP006568.1 Protein Homology CDS 4000656 4000826 . - 0 ID=cds3989;Parent=gene4048;Dbxref=Genbank:WP_051419941.1;Name=WP_051419941.1;gbkey=CDS;product=transposase;protein_id=WP_051419941.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4000780 4001862 . - . ID=gene4049;Name=SOPEG_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19865 NZ_CP006568.1 Protein Homology CDS 4000780 4001862 . - 0 ID=cds3990;Parent=gene4049;Dbxref=Genbank:WP_038469125.1;Name=WP_038469125.1;gbkey=CDS;product=transposase;protein_id=WP_038469125.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4001961 4002257 . - . ID=gene4050;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=SOPEG_RS19870;old_locus_tag=SOPEG_3685 NZ_CP006568.1 Protein Homology CDS 4001961 4002257 . - 0 ID=cds3991;Parent=gene4050;Dbxref=Genbank:WP_025246643.1;Name=WP_025246643.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_025246643.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4002281 4003246 . - . ID=gene4051;Name=SOPEG_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19875;old_locus_tag=SOPEG_3686 NZ_CP006568.1 Protein Homology CDS 4002281 4003246 . - 0 ID=cds3992;Parent=gene4051;Dbxref=Genbank:WP_038469127.1;Name=WP_038469127.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_038469127.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4003528 4004404 . - . ID=gene4052;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=pseudogene;locus_tag=SOPEG_RS19880;pseudo=true NZ_CP006568.1 Protein Homology CDS 4003528 4004404 . - 0 ID=cds3993;Parent=gene4052;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4004416 4005858 . - . ID=gene4053;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=SOPEG_RS19885;old_locus_tag=SOPEG_3688 NZ_CP006568.1 Protein Homology CDS 4004416 4005858 . - 0 ID=cds3994;Parent=gene4053;Dbxref=Genbank:WP_025246644.1;Name=WP_025246644.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium/panthothenate symporter;protein_id=WP_025246644.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4005848 4006090 . - . ID=gene4054;Name=SOPEG_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19890;old_locus_tag=SOPEG_3689 NZ_CP006568.1 Protein Homology CDS 4005848 4006090 . - 0 ID=cds3995;Parent=gene4054;Dbxref=Genbank:WP_025246645.1;Name=WP_025246645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246645.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4006119 4007180 . + . ID=id600;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4006549 4007121 . + . ID=gene4055;Name=SOPEG_RS19895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19895;pseudo=true NZ_CP006568.1 Protein Homology CDS 4006549 4007121 . + 0 ID=cds3996;Parent=gene4055;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:4006741..4006743%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4007311 4008660 . - . ID=gene4056;Name=SOPEG_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19900;old_locus_tag=SOPEG_3691 NZ_CP006568.1 Protein Homology CDS 4007311 4008660 . - 0 ID=cds3997;Parent=gene4056;Dbxref=Genbank:WP_025246646.1;Name=WP_025246646.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase;protein_id=WP_025246646.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4008672 4009136 . - . ID=gene4057;Name=SOPEG_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19905;old_locus_tag=SOPEG_3692 NZ_CP006568.1 Protein Homology CDS 4008672 4009136 . - 0 ID=cds3998;Parent=gene4057;Dbxref=Genbank:WP_025246647.1;Name=WP_025246647.1;gbkey=CDS;product=acetyl-CoA carboxylase;protein_id=WP_025246647.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4009158 4009610 . - . ID=gene4058;Name=SOPEG_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19910;old_locus_tag=SOPEG_3693 NZ_CP006568.1 Protein Homology CDS 4009158 4009610 . - 0 ID=cds3999;Parent=gene4058;Dbxref=Genbank:WP_025246648.1;Name=WP_025246648.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_025246648.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4009853 4010452 . - . ID=gene4059;Name=SOPEG_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19915;old_locus_tag=SOPEG_3694 NZ_CP006568.1 Protein Homology CDS 4009853 4010452 . - 0 ID=cds4000;Parent=gene4059;Dbxref=Genbank:WP_025246649.1;Name=WP_025246649.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfite oxidase subunit YedZ;protein_id=WP_025246649.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4010453 4011454 . - . ID=gene4060;Name=SOPEG_RS19920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19920;pseudo=true NZ_CP006568.1 Protein Homology CDS 4010453 4011454 . - 0 ID=cds4001;Parent=gene4060;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=TMAO reductase;pseudo=true;transl_except=(pos:complement(4011290..4011292)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4011595 4013425 . + . ID=gene4061;Name=SOPEG_RS19925;end_range=4013425,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19925;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4011595 4013425 . + 0 ID=cds4002;Parent=gene4061;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;end_range=4013425,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4013856 4014899 . + . ID=gene4062;Name=SOPEG_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19930;old_locus_tag=SOPEG_3697 NZ_CP006568.1 Protein Homology CDS 4013856 4014899 . + 0 ID=cds4003;Parent=gene4062;Dbxref=Genbank:WP_011410020.1;Name=WP_011410020.1;gbkey=CDS;product=rod shape-determining protein Mbl;protein_id=WP_011410020.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4014994 4016055 . + . ID=gene4063;Name=SOPEG_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19935;old_locus_tag=SOPEG_3698 NZ_CP006568.1 Protein Homology CDS 4014994 4016055 . + 0 ID=cds4004;Parent=gene4063;Dbxref=Genbank:WP_025246650.1;Name=WP_025246650.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_025246650.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4016052 4016540 . + . ID=gene4064;Name=SOPEG_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19940;old_locus_tag=SOPEG_3699 NZ_CP006568.1 Protein Homology CDS 4016052 4016540 . + 0 ID=cds4005;Parent=gene4064;Dbxref=Genbank:WP_025246651.1;Name=WP_025246651.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_025246651.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4016559 4017120 . + . ID=gene4065;Name=SOPEG_RS19945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS19945;pseudo=true NZ_CP006568.1 Protein Homology CDS 4016559 4017120 . + 0 ID=cds4006;Parent=gene4065;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=septum formation inhibitor Maf;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4017134 4018603 . + . ID=gene4066;Name=SOPEG_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19950;old_locus_tag=SOPEG_3701 NZ_CP006568.1 Protein Homology CDS 4017134 4018603 . + 0 ID=cds4007;Parent=gene4066;Dbxref=Genbank:WP_025246652.1;Name=WP_025246652.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_025246652.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4018713 4022090 . + . ID=gene4067;Name=SOPEG_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19955 NZ_CP006568.1 Protein Homology CDS 4018713 4022090 . + 0 ID=cds4008;Parent=gene4067;Dbxref=Genbank:WP_051419942.1;Name=WP_051419942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419942.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4022200 4023517 . + . ID=gene4068;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=SOPEG_RS19960;pseudo=true NZ_CP006568.1 Protein Homology CDS 4022200 4023517 . + 0 ID=cds4009;Parent=gene4068;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=tldD;product=protease TldD;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4023677 4024591 . - . ID=gene4069;Name=SOPEG_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19965;old_locus_tag=SOPEG_3704 NZ_CP006568.1 Protein Homology CDS 4023677 4024591 . - 0 ID=cds4010;Parent=gene4069;Dbxref=Genbank:WP_025246654.1;Name=WP_025246654.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246654.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4024923 4025126 . + . ID=gene4070;Name=SOPEG_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19970;old_locus_tag=SOPEG_3705 NZ_CP006568.1 Protein Homology CDS 4024923 4025126 . + 0 ID=cds4011;Parent=gene4070;Dbxref=Genbank:WP_025246655.1;Name=WP_025246655.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=transporter;protein_id=WP_025246655.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4025134 4026060 . + . ID=gene4071;Name=SOPEG_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19975;old_locus_tag=SOPEG_3706 NZ_CP006568.1 Protein Homology CDS 4025134 4026060 . + 0 ID=cds4012;Parent=gene4071;Dbxref=Genbank:WP_025246656.1;Name=WP_025246656.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux subunit AaeA;protein_id=WP_025246656.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4026075 4028033 . + . ID=gene4072;Name=SOPEG_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19980;old_locus_tag=SOPEG_3707 NZ_CP006568.1 Protein Homology CDS 4026075 4028033 . + 0 ID=cds4013;Parent=gene4072;Dbxref=Genbank:WP_025246657.1;Name=WP_025246657.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux subunit AaeB;protein_id=WP_025246657.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4028158 4029604 . + . ID=gene4073;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=pseudogene;locus_tag=SOPEG_RS19985;pseudo=true NZ_CP006568.1 Protein Homology CDS 4028158 4029604 . + 0 ID=cds4014;Parent=gene4073;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;pseudo=true;transl_except=(pos:4028221..4028223%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4029689 4029970 . + . ID=gene4074;Name=SOPEG_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19990;old_locus_tag=SOPEG_3709 NZ_CP006568.1 Protein Homology CDS 4029689 4029970 . + 0 ID=cds4015;Parent=gene4074;Dbxref=Genbank:WP_025246658.1;Name=WP_025246658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246658.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4030170 4030718 . - . ID=gene4075;Name=SOPEG_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS19995;old_locus_tag=SOPEG_3710 NZ_CP006568.1 Protein Homology CDS 4030170 4030718 . - 0 ID=cds4016;Parent=gene4075;Dbxref=Genbank:WP_025246659.1;Name=WP_025246659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246659.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4031080 4032411 . + . ID=gene4076;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=pseudogene;gene_synonym=tldE;locus_tag=SOPEG_RS20000;pseudo=true NZ_CP006568.1 Protein Homology CDS 4031080 4032411 . + 0 ID=cds4017;Parent=gene4076;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PmbA;pseudo=true;transl_except=(pos:4031476..4031478%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4032560 4032946 . + . ID=gene4077;Name=SOPEG_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20005;old_locus_tag=SOPEG_3712 NZ_CP006568.1 Protein Homology CDS 4032560 4032946 . + 0 ID=cds4018;Parent=gene4077;Dbxref=Genbank:WP_025246660.1;Name=WP_025246660.1;gbkey=CDS;product=cytochrome B562;protein_id=WP_025246660.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4032962 4033870 . - . ID=gene4078;Name=SOPEG_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20010;old_locus_tag=SOPEG_3713 NZ_CP006568.1 Protein Homology CDS 4032962 4033870 . - 0 ID=cds4019;Parent=gene4078;Dbxref=Genbank:WP_025246661.1;Name=WP_025246661.1;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_025246661.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4033979 4035821 . - . ID=gene4079;Name=SOPEG_RS20015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20015;pseudo=true NZ_CP006568.1 Protein Homology CDS 4033979 4035821 . - 0 ID=cds4020;Parent=gene4079;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glucoamylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4036012 4037295 . - . ID=gene4080;Name=SOPEG_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20020;old_locus_tag=SOPEG_3715 NZ_CP006568.1 Protein Homology CDS 4036012 4037295 . - 0 ID=cds4021;Parent=gene4080;Dbxref=Genbank:WP_025246662.1;Name=WP_025246662.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246662.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4037303 4038403 . - . ID=gene4081;Name=SOPEG_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20025;old_locus_tag=SOPEG_3716 NZ_CP006568.1 Protein Homology CDS 4037303 4038403 . - 0 ID=cds4022;Parent=gene4081;Dbxref=Genbank:WP_025246663.1;Name=WP_025246663.1;gbkey=CDS;product=glycerol dehydrogenase;protein_id=WP_025246663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4038735 4041159 . + . ID=gene4082;Name=SOPEG_RS20030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20030;pseudo=true NZ_CP006568.1 Protein Homology CDS 4038735 4041159 . + 0 ID=cds4023;Parent=gene4082;exception=annotated by transcript or proteomic data;gbkey=CDS;product=mechanosensitive ion channel protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4041390 4041929 . - . ID=gene4083;Name=SOPEG_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20035;old_locus_tag=SOPEG_3718 NZ_CP006568.1 Protein Homology CDS 4041390 4041929 . - 0 ID=cds4024;Parent=gene4083;Dbxref=Genbank:WP_025246664.1;Name=WP_025246664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246664.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4042548 4042826 . + . ID=gene4084;Name=SOPEG_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20040 NZ_CP006568.1 Protein Homology CDS 4042548 4042826 . + 0 ID=cds4025;Parent=gene4084;Dbxref=Genbank:WP_025246665.1;Name=WP_025246665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246665.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4044608 4045889 . - . ID=gene4085;Name=SOPEG_RS20045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20045;pseudo=true NZ_CP006568.1 Protein Homology CDS 4044608 4045889 . - 0 ID=cds4026;Parent=gene4085;Note=is involved in the uptake of citrate and the transport of protons into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=citrate-proton symporter;pseudo=true;transl_except=(pos:complement(4045277..4045279)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4046262 4047914 . + . ID=gene4086;Name=mdoD;gbkey=Gene;gene=mdoD;gene_biotype=pseudogene;gene_synonym=opgD;locus_tag=SOPEG_RS20050;pseudo=true NZ_CP006568.1 Protein Homology CDS 4046262 4047914 . + 0 ID=cds4027;Parent=gene4086;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;gbkey=CDS;gene=mdoD;product=glucan biosynthesis protein D;pseudo=true;transl_except=(pos:4046352..4046354%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4047985 4048914 . - . ID=gene4087;Name=SOPEG_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20055 NZ_CP006568.1 Protein Homology CDS 4047985 4048914 . - 0 ID=cds4028;Parent=gene4087;Dbxref=Genbank:WP_025246667.1;Name=WP_025246667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246667.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4049045 4049812 . - . ID=gene4088;Name=SOPEG_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20060 NZ_CP006568.1 Protein Homology CDS 4049045 4049812 . - 0 ID=cds4029;Parent=gene4088;Dbxref=Genbank:WP_025246668.1;Name=WP_025246668.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_025246668.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4049829 4050383 . - . ID=gene4089;Name=SOPEG_RS20065;end_range=4050383,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20065;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4049829 4050383 . - 0 ID=cds4030;Parent=gene4089;end_range=4050383,.;gbkey=CDS;partial=true;product=ABC transporter permease;pseudo=true;transl_except=(pos:complement(4050177..4050179)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4050380 4051182 . - . ID=gene4090;Name=SOPEG_RS20070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20070;partial=true;pseudo=true;start_range=.,4050380 NZ_CP006568.1 Protein Homology CDS 4050380 4051182 . - 0 ID=cds4031;Parent=gene4090;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4050380;transl_except=(pos:complement(4050563..4050565)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4051463 4052549 . + . ID=gene4091;Name=SOPEG_RS20075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20075;old_locus_tag=SOPEG_3726;pseudo=true NZ_CP006568.1 Protein Homology CDS 4051463 4052549 . + 0 ID=cds4032;Parent=gene4091;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4052624 4055231 . + . ID=id601;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4052746 4053495 . - . ID=gene4092;Name=SOPEG_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20080;old_locus_tag=SOPEG_3727 NZ_CP006568.1 Protein Homology CDS 4052746 4053495 . - 0 ID=cds4033;Parent=gene4092;Dbxref=Genbank:WP_025246669.1;Name=WP_025246669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246669.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4053507 4055024 . - . ID=gene4093;Name=SOPEG_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20085;old_locus_tag=SOPEG_3728 NZ_CP006568.1 Protein Homology CDS 4053507 4055024 . - 0 ID=cds4034;Parent=gene4093;Dbxref=Genbank:WP_038469136.1;Name=WP_038469136.1;gbkey=CDS;product=transposase;protein_id=WP_038469136.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4055228 4055679 . + . ID=gene4094;Name=SOPEG_RS20090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20090;partial=true;pseudo=true;start_range=.,4055228 NZ_CP006568.1 Protein Homology CDS 4055228 4055679 . + 0 ID=cds4035;Parent=gene4094;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=cardiolipin synthase 2;pseudo=true;start_range=.,4055228;transl_table=11 NZ_CP006568.1 RefSeq gene 4055690 4056664 . + . ID=gene4095;Name=SOPEG_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20095 NZ_CP006568.1 Protein Homology CDS 4055690 4056664 . + 0 ID=cds4036;Parent=gene4095;Dbxref=Genbank:WP_038469138.1;Name=WP_038469138.1;gbkey=CDS;product=membrane protein;protein_id=WP_038469138.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4056757 4057638 . - . ID=gene4096;Name=SOPEG_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20100;old_locus_tag=SOPEG_3731 NZ_CP006568.1 Protein Homology CDS 4056757 4057638 . - 0 ID=cds4037;Parent=gene4096;Dbxref=Genbank:WP_025246673.1;Name=WP_025246673.1;gbkey=CDS;product=phenazine biosynthesis protein PhzF family;protein_id=WP_025246673.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4058151 4059215 . + . ID=id602;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4058232 4059155 . + . ID=gene4097;Name=SOPEG_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20105;old_locus_tag=SOPEG_3732 NZ_CP006568.1 Protein Homology CDS 4058232 4059155 . + 0 ID=cds4038;Parent=gene4097;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4059387 4059629 . + . ID=gene4098;Name=SOPEG_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20110 NZ_CP006568.1 GeneMarkS+ CDS 4059387 4059629 . + 0 ID=cds4039;Parent=gene4098;Dbxref=Genbank:WP_025246674.1;Name=WP_025246674.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246674.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4060022 4060273 . - . ID=gene4099;Name=SOPEG_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20115;old_locus_tag=SOPEG_3733 NZ_CP006568.1 Protein Homology CDS 4060022 4060273 . - 0 ID=cds4040;Parent=gene4099;Dbxref=Genbank:WP_025246675.1;Name=WP_025246675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246675.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4060509 4061189 . + . ID=gene4100;Name=SOPEG_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20120;old_locus_tag=SOPEG_3734 NZ_CP006568.1 Protein Homology CDS 4060509 4061189 . + 0 ID=cds4041;Parent=gene4100;Dbxref=Genbank:WP_025246676.1;Name=WP_025246676.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_025246676.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4061381 4062832 . - . ID=gene4101;Name=SOPEG_RS20125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20125;pseudo=true NZ_CP006568.1 Protein Homology CDS 4061381 4062832 . - 0 ID=cds4042;Parent=gene4101;gbkey=CDS;product=RND transporter;pseudo=true;transl_except=(pos:complement(4062491..4062493)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4062860 4065392 . - . ID=gene4102;Name=SOPEG_RS20130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20130;pseudo=true NZ_CP006568.1 Protein Homology CDS 4062860 4065392 . - 0 ID=cds4043;Parent=gene4102;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_except=(pos:complement(4064904..4064906)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4065389 4068550 . - . ID=gene4103;Name=SOPEG_RS20135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20135;pseudo=true NZ_CP006568.1 Protein Homology CDS 4065389 4068550 . - 0 ID=cds4044;Parent=gene4103;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_except=(pos:complement(4066610..4066612)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4068728 4069906 . - . ID=gene4104;Name=SOPEG_RS20140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20140;partial=true;pseudo=true;start_range=.,4068728 NZ_CP006568.1 Protein Homology CDS 4068728 4069906 . - 0 ID=cds4045;Parent=gene4104;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=multidrug transporter;pseudo=true;start_range=.,4068728;transl_table=11 NZ_CP006568.1 RefSeq gene 4070753 4071634 . + . ID=gene4105;Name=SOPEG_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20145 NZ_CP006568.1 Protein Homology CDS 4070753 4071634 . + 0 ID=cds4046;Parent=gene4105;Dbxref=Genbank:WP_025246677.1;Name=WP_025246677.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246677.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4071897 4072703 . + . ID=gene4106;Name=SOPEG_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20150 NZ_CP006568.1 Protein Homology CDS 4071897 4072703 . + 0 ID=cds4047;Parent=gene4106;Dbxref=Genbank:WP_051419943.1;Name=WP_051419943.1;Note=involved in the expression of virulence genes;gbkey=CDS;product=transcriptional regulator InvF;protein_id=WP_051419943.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4072700 4074175 . + . ID=gene4107;Name=SOPEG_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20155 NZ_CP006568.1 Protein Homology CDS 4072700 4074175 . + 0 ID=cds4048;Parent=gene4107;Dbxref=Genbank:WP_051419944.1;Name=WP_051419944.1;Note=may be involved in the export or assemby of proteins involved in the entry of Salmonella into host cells;gbkey=CDS;product=type III secretion system outer membrane pore InvG;protein_id=WP_051419944.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4074726 4076768 . + . ID=gene4108;Name=SOPEG_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20160;old_locus_tag=SOPEG_3742 NZ_CP006568.1 Protein Homology CDS 4074726 4076768 . + 0 ID=cds4049;Parent=gene4108;Dbxref=Genbank:WP_025246679.1;Name=WP_025246679.1;gbkey=CDS;product=type III secretion system protein InvA;protein_id=WP_025246679.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4076786 4077187 . + . ID=gene4109;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;gene_synonym=invB;locus_tag=SOPEG_RS20165;old_locus_tag=SOPEG_3743 NZ_CP006568.1 Protein Homology CDS 4076786 4077187 . + 0 ID=cds4050;Parent=gene4109;Dbxref=Genbank:WP_025246680.1;Name=WP_025246680.1;Note=involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells;gbkey=CDS;gene=spaK;product=type III secretion system chaperone SpaK;protein_id=WP_025246680.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4077188 4078486 . + . ID=gene4110;Name=SOPEG_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20170;old_locus_tag=SOPEG_3744 NZ_CP006568.1 Protein Homology CDS 4077188 4078486 . + 0 ID=cds4051;Parent=gene4110;Dbxref=Genbank:WP_025246681.1;Name=WP_025246681.1;Note=invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells%3B probable catalytic subunit of a protein translocase;gbkey=CDS;product=ATP synthase;protein_id=WP_025246681.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4078470 4078931 . + . ID=gene4111;Name=SOPEG_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20175;old_locus_tag=SOPEG_3745 NZ_CP006568.1 GeneMarkS+ CDS 4078470 4078931 . + 0 ID=cds4052;Parent=gene4111;Dbxref=Genbank:WP_025246682.1;Name=WP_025246682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246682.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4079250 4079711 . + . ID=gene4112;Name=SOPEG_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20180 NZ_CP006568.1 GeneMarkS+ CDS 4079250 4079711 . + 0 ID=cds4053;Parent=gene4112;Dbxref=Genbank:WP_025246683.1;Name=WP_025246683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246683.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4079708 4080862 . + . ID=gene4113;Name=SOPEG_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23500;old_locus_tag=SOPEG_3747 NZ_CP006568.1 Protein Homology CDS 4079708 4080862 . + 0 ID=cds4054;Parent=gene4113;Dbxref=Genbank:WP_051419945.1;Name=WP_051419945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419945.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4080852 4081445 . + . ID=gene4114;Name=SOPEG_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20190 NZ_CP006568.1 Protein Homology CDS 4080852 4081445 . + 0 ID=cds4055;Parent=gene4114;Dbxref=Genbank:WP_051419946.1;Name=WP_051419946.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_051419946.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4081442 4081702 . + . ID=gene4115;Name=SOPEG_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20195;old_locus_tag=SOPEG_3749 NZ_CP006568.1 Protein Homology CDS 4081442 4081702 . + 0 ID=cds4056;Parent=gene4115;Dbxref=Genbank:WP_025246686.1;Name=WP_025246686.1;Note=involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells;gbkey=CDS;product=type III secretion system protein SpaQ;protein_id=WP_025246686.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4081706 4082503 . + . ID=gene4116;Name=SOPEG_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20200;old_locus_tag=SOPEG_3750 NZ_CP006568.1 Protein Homology CDS 4081706 4082503 . + 0 ID=cds4057;Parent=gene4116;Dbxref=Genbank:WP_025246687.1;Name=WP_025246687.1;gbkey=CDS;product=type III secretion apparatus SpaR;protein_id=WP_025246687.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4082493 4083545 . + . ID=gene4117;Name=SOPEG_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20205 NZ_CP006568.1 Protein Homology CDS 4082493 4083545 . + 0 ID=cds4058;Parent=gene4117;Dbxref=Genbank:WP_025246688.1;Name=WP_025246688.1;Note=Required for surface presentation of invasion plasmid antigens%3B required for invasion and for secretion of the three ipa proteins;gbkey=CDS;product=type III secretion system protein SpaS;protein_id=WP_025246688.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4083528 4084592 . + . ID=id603;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4083610 4084533 . + . ID=gene4118;Name=SOPEG_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20210;old_locus_tag=SOPEG_3752 NZ_CP006568.1 Protein Homology CDS 4083610 4084533 . + 0 ID=cds4059;Parent=gene4118;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4084711 4085217 . + . ID=gene4119;Name=SOPEG_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20215;old_locus_tag=SOPEG_3753 NZ_CP006568.1 Protein Homology CDS 4084711 4085217 . + 0 ID=cds4060;Parent=gene4119;Dbxref=Genbank:WP_025246689.1;Name=WP_025246689.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246689.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4085413 4086476 . + . ID=id604;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4085493 4086416 . + . ID=gene4120;Name=SOPEG_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20220;old_locus_tag=SOPEG_3754 NZ_CP006568.1 Protein Homology CDS 4085493 4086416 . + 0 ID=cds4061;Parent=gene4120;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4086719 4087372 . + . ID=gene4121;Name=SOPEG_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23505 NZ_CP006568.1 Protein Homology CDS 4086719 4087372 . + 0 ID=cds4062;Parent=gene4121;Dbxref=Genbank:WP_051419947.1;Name=WP_051419947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419947.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4087345 4087806 . + . ID=gene4122;Name=SOPEG_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20225 NZ_CP006568.1 Protein Homology CDS 4087345 4087806 . + 0 ID=cds4063;Parent=gene4122;Dbxref=Genbank:WP_025246691.1;Name=WP_025246691.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246691.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4088308 4088532 . + . ID=gene4123;Name=SOPEG_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20230 NZ_CP006568.1 GeneMarkS+ CDS 4088308 4088532 . + 0 ID=cds4064;Parent=gene4123;Dbxref=Genbank:WP_025246692.1;Name=WP_025246692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246692.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4088529 4089260 . + . ID=gene4124;Name=SOPEG_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20235 NZ_CP006568.1 Protein Homology CDS 4088529 4089260 . + 0 ID=cds4065;Parent=gene4124;Dbxref=Genbank:WP_025246693.1;Name=WP_025246693.1;gbkey=CDS;product=type III secretion apparatus lipoprotein;protein_id=WP_025246693.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4089264 4089863 . + . ID=gene4125;Name=SOPEG_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20240;old_locus_tag=SOPEG_3759 NZ_CP006568.1 Protein Homology CDS 4089264 4089863 . + 0 ID=cds4066;Parent=gene4125;Dbxref=Genbank:WP_025246694.1;Name=WP_025246694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246694.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4089826 4090497 . + . ID=gene4126;Name=SOPEG_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20245;old_locus_tag=SOPEG_3760 NZ_CP006568.1 Protein Homology CDS 4089826 4090497 . + 0 ID=cds4067;Parent=gene4126;Dbxref=Genbank:WP_038469141.1;Name=WP_038469141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469141.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4090564 4091166 . + . ID=gene4127;Name=SOPEG_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20250;old_locus_tag=SOPEG_3761 NZ_CP006568.1 Protein Homology CDS 4090564 4091166 . + 0 ID=cds4068;Parent=gene4127;Dbxref=Genbank:WP_025246696.1;Name=WP_025246696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246696.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4091182 4091523 . - . ID=gene4128;Name=SOPEG_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20255;old_locus_tag=SOPEG_3762 NZ_CP006568.1 Protein Homology CDS 4091182 4091523 . - 0 ID=cds4069;Parent=gene4128;Dbxref=Genbank:WP_025246697.1;Name=WP_025246697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246697.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4091708 4093142 . + . ID=gene4129;Name=SOPEG_RS20260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20260;pseudo=true NZ_CP006568.1 Protein Homology CDS 4091708 4093142 . + 0 ID=cds4070;Parent=gene4129;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4093160 4094317 . - . ID=gene4130;Name=SOPEG_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20265 NZ_CP006568.1 Protein Homology CDS 4093160 4094317 . - 0 ID=cds4071;Parent=gene4130;Dbxref=Genbank:WP_025246698.1;Name=WP_025246698.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_025246698.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4095012 4095200 . + . ID=gene4131;Name=SOPEG_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23510 NZ_CP006568.1 GeneMarkS+ CDS 4095012 4095200 . + 0 ID=cds4072;Parent=gene4131;Dbxref=Genbank:WP_051419948.1;Name=WP_051419948.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419948.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4095174 4097519 . + . ID=id605;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4095211 4096341 . - . ID=gene4132;Name=SOPEG_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20275 NZ_CP006568.1 Protein Homology CDS 4095211 4096341 . - 0 ID=cds4073;Parent=gene4132;Dbxref=Genbank:WP_025246700.1;Name=WP_025246700.1;gbkey=CDS;product=transposase;protein_id=WP_025246700.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4096539 4097288 . - . ID=gene4133;Name=SOPEG_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20280;old_locus_tag=SOPEG_3767 NZ_CP006568.1 Protein Homology CDS 4096539 4097288 . - 0 ID=cds4074;Parent=gene4133;Dbxref=Genbank:WP_025246701.1;Name=WP_025246701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246701.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4097404 4098807 . - . ID=gene4134;Name=SOPEG_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20285 NZ_CP006568.1 Protein Homology CDS 4097404 4098807 . - 0 ID=cds4075;Parent=gene4134;Dbxref=Genbank:WP_051419949.1;Name=WP_051419949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419949.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4097528 4099011 . + . ID=id606;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4098968 4099486 . + . ID=gene4135;Name=SOPEG_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20290 NZ_CP006568.1 Protein Homology CDS 4098968 4099486 . + 0 ID=cds4076;Parent=gene4135;Dbxref=Genbank:WP_025246702.1;Name=WP_025246702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246702.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4099897 4100730 . + . ID=gene4136;Name=SOPEG_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20295;old_locus_tag=SOPEG_3769 NZ_CP006568.1 Protein Homology CDS 4099897 4100730 . + 0 ID=cds4077;Parent=gene4136;Dbxref=Genbank:WP_051419950.1;Name=WP_051419950.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419950.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4100727 4101224 . + . ID=gene4137;Name=SOPEG_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23515;old_locus_tag=SOPEG_3770 NZ_CP006568.1 Protein Homology CDS 4100727 4101224 . + 0 ID=cds4078;Parent=gene4137;Dbxref=Genbank:WP_025246704.1;Name=WP_025246704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246704.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4101502 4101864 . + . ID=gene4138;Name=SOPEG_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20305;old_locus_tag=SOPEG_3771 NZ_CP006568.1 Protein Homology CDS 4101502 4101864 . + 0 ID=cds4079;Parent=gene4138;Dbxref=Genbank:WP_025246705.1;Name=WP_025246705.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_025246705.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4102081 4103145 . + . ID=id607;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4102141 4103066 . - . ID=gene4139;Name=SOPEG_RS20310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20310;pseudo=true NZ_CP006568.1 Protein Homology CDS 4102141 4103066 . - 0 ID=cds4080;Parent=gene4139;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4104528 4104878 . + . ID=gene4140;Name=SOPEG_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20315;old_locus_tag=SOPEG_3773 NZ_CP006568.1 Protein Homology CDS 4104528 4104878 . + 0 ID=cds4081;Parent=gene4140;Dbxref=Genbank:WP_025246706.1;Name=WP_025246706.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246706.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4104881 4105117 . + . ID=gene4141;Name=SOPEG_RS20320;end_range=4105117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20320;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4104881 4105117 . + 0 ID=cds4082;Parent=gene4141;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;end_range=4105117,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4105102 4105265 . + . ID=id608;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4105428 4105775 . + . ID=gene4142;Name=SOPEG_RS20325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20325;partial=true;pseudo=true;start_range=.,4105428 NZ_CP006568.1 Protein Homology CDS 4105428 4105775 . + 0 ID=cds4083;Parent=gene4142;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,4105428;transl_table=11 NZ_CP006568.1 RefSeq gene 4105908 4106807 . + . ID=gene4143;Name=SOPEG_RS20330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20330;pseudo=true NZ_CP006568.1 Protein Homology CDS 4105908 4106807 . + 0 ID=cds4084;Parent=gene4143;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;pseudo=true;transl_except=(pos:4106622..4106624%2Caa:Other),(pos:4106670..4106672%2Caa:Other),(pos:4106715..4106717%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4106807 4107598 . + . ID=gene4144;Name=motB;end_range=4107598,.;gbkey=Gene;gene=motB;gene_biotype=pseudogene;locus_tag=SOPEG_RS20335;old_locus_tag=SOPEG_3777;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4106807 4107598 . + 0 ID=cds4085;Parent=gene4144;Note=with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;end_range=4107598,.;exception=unextendable partial coding region;gbkey=CDS;gene=motB;partial=true;product=flagellar motor protein MotB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4107759 4109894 . + . ID=gene4145;Name=SOPEG_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20340;old_locus_tag=SOPEG_3778 NZ_CP006568.1 Protein Homology CDS 4107759 4109894 . + 0 ID=cds4086;Parent=gene4145;Dbxref=Genbank:WP_025246709.1;Name=WP_025246709.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_025246709.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4109931 4110422 . + . ID=gene4146;Name=SOPEG_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20345;old_locus_tag=SOPEG_3779 NZ_CP006568.1 Protein Homology CDS 4109931 4110422 . + 0 ID=cds4087;Parent=gene4146;Dbxref=Genbank:WP_025246710.1;Name=WP_025246710.1;gbkey=CDS;product=chemotaxis protein CheW;protein_id=WP_025246710.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4110561 4112090 . + . ID=gene4147;Name=SOPEG_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20350 NZ_CP006568.1 Protein Homology CDS 4110561 4112090 . + 0 ID=cds4088;Parent=gene4147;Dbxref=Genbank:WP_051419951.1;Name=WP_051419951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419951.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4112134 4113757 . + . ID=gene4148;Name=SOPEG_RS20355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20355;pseudo=true NZ_CP006568.1 Protein Homology CDS 4112134 4113757 . + 0 ID=cds4089;Parent=gene4148;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4113413..4113415%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4113797 4114630 . + . ID=gene4149;Name=SOPEG_RS20360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20360;pseudo=true NZ_CP006568.1 Protein Homology CDS 4113797 4114630 . + 0 ID=cds4090;Parent=gene4149;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;pseudo=true;transl_except=(pos:4114478..4114480%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4114627 4115663 . + . ID=gene4150;Name=SOPEG_RS20365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20365;pseudo=true NZ_CP006568.1 Protein Homology CDS 4114627 4115663 . + 0 ID=cds4091;Parent=gene4150;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4115700 4116089 . + . ID=gene4151;Name=SOPEG_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20370;old_locus_tag=SOPEG_3785 NZ_CP006568.1 Protein Homology CDS 4115700 4116089 . + 0 ID=cds4092;Parent=gene4151;Dbxref=Genbank:WP_025246713.1;Name=WP_025246713.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_025246713.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4116102 4116634 . + . ID=gene4152;Name=SOPEG_RS20375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20375;pseudo=true NZ_CP006568.1 Protein Homology CDS 4116102 4116634 . + 0 ID=cds4093;Parent=gene4152;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein CheZ;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4116737 4117718 . + . ID=gene4153;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=pseudogene;locus_tag=SOPEG_RS20380;pseudo=true NZ_CP006568.1 Protein Homology CDS 4116737 4117718 . + 0 ID=cds4094;Parent=gene4153;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4117720 4119763 . + . ID=gene4154;Name=SOPEG_RS20385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20385;pseudo=true NZ_CP006568.1 Protein Homology CDS 4117720 4119763 . + 0 ID=cds4095;Parent=gene4154;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4119763 4120233 . + . ID=gene4155;Name=SOPEG_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20390 NZ_CP006568.1 Protein Homology CDS 4119763 4120233 . + 0 ID=cds4096;Parent=gene4155;Dbxref=Genbank:WP_025246714.1;Name=WP_025246714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246714.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4120325 4120582 . - . ID=gene4156;Name=SOPEG_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23520;old_locus_tag=SOPEG_ps3790 NZ_CP006568.1 Protein Homology CDS 4120325 4120582 . - 0 ID=cds4097;Parent=gene4156;Dbxref=Genbank:WP_051419952.1;Name=WP_051419952.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419952.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4120769 4121065 . - . ID=gene4157;Name=SOPEG_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20400;old_locus_tag=SOPEG_3791 NZ_CP006568.1 Protein Homology CDS 4120769 4121065 . - 0 ID=cds4098;Parent=gene4157;Dbxref=Genbank:WP_025246715.1;Name=WP_025246715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246715.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4121149 4121757 . - . ID=gene4158;Name=SOPEG_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20405;old_locus_tag=SOPEG_3792 NZ_CP006568.1 Protein Homology CDS 4121149 4121757 . - 0 ID=cds4099;Parent=gene4158;Dbxref=Genbank:WP_025246716.1;Name=WP_025246716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246716.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4121978 4122247 . + . ID=gene4159;Name=SOPEG_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20410 NZ_CP006568.1 GeneMarkS+ CDS 4121978 4122247 . + 0 ID=cds4100;Parent=gene4159;Dbxref=Genbank:WP_025246717.1;Name=WP_025246717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246717.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4122347 4122760 . + . ID=gene4160;Name=SOPEG_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20415;old_locus_tag=SOPEG_3793 NZ_CP006568.1 Protein Homology CDS 4122347 4122760 . + 0 ID=cds4101;Parent=gene4160;Dbxref=Genbank:WP_025246718.1;Name=WP_025246718.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_025246718.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4122764 4123156 . + . ID=gene4161;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=SOPEG_RS20420;old_locus_tag=SOPEG_3794 NZ_CP006568.1 Protein Homology CDS 4122764 4123156 . + 0 ID=cds4102;Parent=gene4161;Dbxref=Genbank:WP_025246719.1;Name=WP_025246719.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_025246719.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4123169 4123834 . + . ID=gene4162;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=SOPEG_RS20425;old_locus_tag=SOPEG_3795 NZ_CP006568.1 Protein Homology CDS 4123169 4123834 . + 0 ID=cds4103;Parent=gene4162;Dbxref=Genbank:WP_025246720.1;Name=WP_025246720.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_025246720.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4123889 4125077 . + . ID=gene4163;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=pseudogene;locus_tag=SOPEG_RS20430;pseudo=true NZ_CP006568.1 Protein Homology CDS 4123889 4125077 . + 0 ID=cds4104;Parent=gene4163;Note=the hook connects flagellar basal body to the flagellar filament;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flgE;product=flagellar biosynthesis protein FlgE;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4125096 4125848 . + . ID=gene4164;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=pseudogene;locus_tag=SOPEG_RS20435;pseudo=true NZ_CP006568.1 Protein Homology CDS 4125096 4125848 . + 0 ID=cds4105;Parent=gene4164;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=flgF;product=flagellar biosynthesis protein FlgF;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4125867 4126502 . + . ID=gene4165;Name=flgG;end_range=4126502,.;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=SOPEG_RS20440;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4125867 4126502 . + 0 ID=cds4106;Parent=gene4165;Note=makes up the distal portion of the flagellar basal body rod;end_range=4126502,.;exception=unextendable partial coding region;gbkey=CDS;gene=flgG;partial=true;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4127159 4127434 . + . ID=gene4166;Name=SOPEG_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23525 NZ_CP006568.1 Protein Homology CDS 4127159 4127434 . + 0 ID=cds4107;Parent=gene4166;Dbxref=Genbank:WP_025246722.1;Name=WP_025246722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246722.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4127654 4127941 . + . ID=gene4167;Name=SOPEG_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23530 NZ_CP006568.1 Protein Homology CDS 4127654 4127941 . + 0 ID=cds4108;Parent=gene4167;Dbxref=Genbank:WP_025246723.1;Name=WP_025246723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246723.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4127922 4128985 . + . ID=id609;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4127983 4128906 . - . ID=gene4168;Name=SOPEG_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20450;old_locus_tag=SOPEG_3800 NZ_CP006568.1 Protein Homology CDS 4127983 4128906 . - 0 ID=cds4109;Parent=gene4168;Dbxref=Genbank:WP_025246724.1;Name=WP_025246724.1;gbkey=CDS;product=transposase;protein_id=WP_025246724.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4128982 4129179 . + . ID=gene4169;Name=SOPEG_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20455 NZ_CP006568.1 Protein Homology CDS 4128982 4129179 . + 0 ID=cds4110;Parent=gene4169;Dbxref=Genbank:WP_025246725.1;Name=WP_025246725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246725.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4129304 4130947 . + . ID=gene4170;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=SOPEG_RS20460;old_locus_tag=SOPEG_3801 NZ_CP006568.1 Protein Homology CDS 4129304 4130947 . + 0 ID=cds4111;Parent=gene4170;Dbxref=Genbank:WP_025246726.1;Name=WP_025246726.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_025246726.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4130990 4131949 . + . ID=gene4171;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=SOPEG_RS20465;old_locus_tag=SOPEG_3802 NZ_CP006568.1 Protein Homology CDS 4130990 4131949 . + 0 ID=cds4112;Parent=gene4171;Dbxref=Genbank:WP_025246727.1;Name=WP_025246727.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook protein FlgL;protein_id=WP_025246727.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4132056 4133985 . + . ID=id610;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4132120 4132911 . - . ID=gene4172;Name=SOPEG_RS20470;end_range=4132911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20470;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4132120 4132911 . - 0 ID=cds4113;Parent=gene4172;end_range=4132911,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4133004 4133927 . + . ID=gene4173;Name=SOPEG_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20475;old_locus_tag=SOPEG_3805 NZ_CP006568.1 Protein Homology CDS 4133004 4133927 . + 0 ID=cds4114;Parent=gene4173;Dbxref=Genbank:WP_025246729.1;Name=WP_025246729.1;gbkey=CDS;product=transposase;protein_id=WP_025246729.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4133990 4134673 . - . ID=gene4174;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=pseudogene;locus_tag=SOPEG_RS20480;partial=true;pseudo=true;start_range=.,4133990 NZ_CP006568.1 Protein Homology CDS 4133990 4134673 . - 0 ID=cds4115;Parent=gene4174;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;exception=unextendable partial coding region;gbkey=CDS;gene=fliR;partial=true;product=flagellar biosynthesis protein FliR;pseudo=true;start_range=.,4133990;transl_table=11 NZ_CP006568.1 RefSeq gene 4134675 4134899 . - . ID=gene4175;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=SOPEG_RS20485 NZ_CP006568.1 Protein Homology CDS 4134675 4134899 . - 0 ID=cds4116;Parent=gene4175;Dbxref=Genbank:WP_038469148.1;Name=WP_038469148.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_038469148.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4134960 4135720 . - . ID=gene4176;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=pseudogene;locus_tag=SOPEG_RS20490;pseudo=true NZ_CP006568.1 Protein Homology CDS 4134960 4135720 . - 0 ID=cds4117;Parent=gene4176;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein flip;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4135717 4136079 . - . ID=gene4177;Name=SOPEG_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20495 NZ_CP006568.1 Protein Homology CDS 4135717 4136079 . - 0 ID=cds4118;Parent=gene4177;Dbxref=Genbank:WP_025246731.1;Name=WP_025246731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246731.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4136147 4136566 . - . ID=gene4178;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=SOPEG_RS20500;old_locus_tag=SOPEG_3809 NZ_CP006568.1 Protein Homology CDS 4136147 4136566 . - 0 ID=cds4119;Parent=gene4178;Dbxref=Genbank:WP_025246732.1;Name=WP_025246732.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_025246732.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4136559 4137539 . - . ID=gene4179;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=SOPEG_RS20505;old_locus_tag=SOPEG_3810 NZ_CP006568.1 Protein Homology CDS 4136559 4137539 . - 0 ID=cds4120;Parent=gene4179;Dbxref=Genbank:WP_025246733.1;Name=WP_025246733.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_025246733.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4137545 4138024 . - . ID=gene4180;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=SOPEG_RS20510;old_locus_tag=SOPEG_3811 NZ_CP006568.1 Protein Homology CDS 4137545 4138024 . - 0 ID=cds4121;Parent=gene4180;Dbxref=Genbank:WP_025246734.1;Name=WP_025246734.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body-associated protein FliL;protein_id=WP_025246734.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4138171 4138569 . - . ID=gene4181;Name=SOPEG_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20515 NZ_CP006568.1 Protein Homology CDS 4138171 4138569 . - 0 ID=cds4122;Parent=gene4181;Dbxref=Genbank:WP_025246735.1;Name=WP_025246735.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246735.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4138596 4138811 . - . ID=gene4182;Name=SOPEG_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20520 NZ_CP006568.1 GeneMarkS+ CDS 4138596 4138811 . - 0 ID=cds4123;Parent=gene4182;Dbxref=Genbank:WP_038469152.1;Name=WP_038469152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469152.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4139343 4140679 . - . ID=gene4183;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=pseudogene;locus_tag=SOPEG_RS20530;partial=true;pseudo=true;start_range=.,4139343 NZ_CP006568.1 Protein Homology CDS 4139343 4140679 . - 0 ID=cds4124;Parent=gene4183;Note=involved in type III protein export during flagellum assembly;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliI;partial=true;product=ATP synthase;pseudo=true;start_range=.,4139343;transl_except=(pos:complement(4140248..4140250)%2Caa:Other),(pos:complement(4139948..4139950)%2Caa:Other),(pos:complement(4139694..4139696)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4140719 4141357 . - . ID=gene4184;Name=SOPEG_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20535 NZ_CP006568.1 Protein Homology CDS 4140719 4141357 . - 0 ID=cds4125;Parent=gene4184;Dbxref=Genbank:WP_038470613.1;Name=WP_038470613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038470613.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4141350 4142341 . - . ID=gene4185;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=pseudogene;locus_tag=SOPEG_RS20540;pseudo=true NZ_CP006568.1 Protein Homology CDS 4141350 4142341 . - 0 ID=cds4126;Parent=gene4185;Note=One of three proteins involved in switching the direction of the flagellar rotation;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliG;product=flagellar motor switch protein G;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4142338 4144047 . - . ID=gene4186;Name=SOPEG_RS20545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20545;pseudo=true NZ_CP006568.1 Protein Homology CDS 4142338 4144047 . - 0 ID=cds4127;Parent=gene4186;gbkey=CDS;product=flagellar M-ring protein FliF;pseudo=true;transl_except=(pos:complement(4142587..4142589)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4144285 4144600 . + . ID=gene4187;Name=SOPEG_RS20550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20550;pseudo=true NZ_CP006568.1 Protein Homology CDS 4144285 4144600 . + 0 ID=cds4128;Parent=gene4187;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar hook-basal body protein FliE;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4144996 4147988 . + . ID=id611;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4145056 4145820 . - . ID=gene4188;Name=SOPEG_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20555;old_locus_tag=SOPEG_3819 NZ_CP006568.1 Protein Homology CDS 4145056 4145820 . - 0 ID=cds4129;Parent=gene4188;Dbxref=Genbank:WP_051419953.1;Name=WP_051419953.1;gbkey=CDS;product=transposase;protein_id=WP_051419953.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4145973 4146671 . + . ID=gene4189;Name=SOPEG_RS20560;end_range=4146671,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20560;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4145973 4146671 . + 0 ID=cds4130;Parent=gene4189;end_range=4146671,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4146791 4147912 . - . ID=gene4190;Name=SOPEG_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20565 NZ_CP006568.1 Protein Homology CDS 4146791 4147912 . - 0 ID=cds4131;Parent=gene4190;Dbxref=Genbank:WP_025246744.1;Name=WP_025246744.1;gbkey=CDS;product=transposase;protein_id=WP_025246744.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4148188 4148448 . + . ID=gene4191;Name=SOPEG_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20570 NZ_CP006568.1 GeneMarkS+ CDS 4148188 4148448 . + 0 ID=cds4132;Parent=gene4191;Dbxref=Genbank:WP_025246745.1;Name=WP_025246745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246745.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4148428 4151873 . + . ID=id612;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4148513 4149436 . + . ID=gene4192;Name=SOPEG_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20575;old_locus_tag=SOPEG_3823 NZ_CP006568.1 Protein Homology CDS 4148513 4149436 . + 0 ID=cds4133;Parent=gene4192;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4149567 4150610 . + . ID=gene4193;Name=SOPEG_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20580 NZ_CP006568.1 Protein Homology CDS 4149567 4150610 . + 0 ID=cds4134;Parent=gene4193;Dbxref=Genbank:WP_025246746.1;Name=WP_025246746.1;gbkey=CDS;product=transposase;protein_id=WP_025246746.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4150647 4151729 . + . ID=gene4194;Name=SOPEG_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20585 NZ_CP006568.1 Protein Homology CDS 4150647 4151729 . + 0 ID=cds4135;Parent=gene4194;Dbxref=Genbank:WP_051420015.1;Name=WP_051420015.1;gbkey=CDS;product=transposase;protein_id=WP_051420015.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4151864 4153673 . - . ID=gene4195;Name=SOPEG_RS20590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20590;partial=true;pseudo=true;start_range=.,4151864 NZ_CP006568.1 Protein Homology CDS 4151864 4153673 . - 0 ID=cds4136;Parent=gene4195;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transketolase;pseudo=true;start_range=.,4151864;transl_except=(pos:complement(4153158..4153160)%2Caa:Other),(pos:complement(4152134..4152136)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4153984 4154721 . + . ID=gene4196;Name=SOPEG_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20595;old_locus_tag=SOPEG_3827 NZ_CP006568.1 Protein Homology CDS 4153984 4154721 . + 0 ID=cds4137;Parent=gene4196;Dbxref=Genbank:WP_025246752.1;Name=WP_025246752.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_025246752.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4154853 4155522 . - . ID=gene4197;Name=SOPEG_RS23535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23535;old_locus_tag=SOPEG_ps3828;pseudo=true NZ_CP006568.1 Protein Homology CDS 4154853 4155522 . - 0 ID=cds4138;Parent=gene4197;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4155627 4156535 . - . ID=gene4198;Name=SOPEG_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20610;old_locus_tag=SOPEG_3829 NZ_CP006568.1 Protein Homology CDS 4155627 4156535 . - 0 ID=cds4139;Parent=gene4198;Dbxref=Genbank:WP_025246753.1;Name=WP_025246753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246753.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4156961 4157545 . + . ID=gene4199;Name=SOPEG_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23540;old_locus_tag=SOPEG_ps3830 NZ_CP006568.1 Protein Homology CDS 4156961 4157545 . + 0 ID=cds4140;Parent=gene4199;Dbxref=Genbank:WP_051419954.1;Name=WP_051419954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419954.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4157794 4158708 . + . ID=gene4200;Name=SOPEG_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20620;old_locus_tag=SOPEG_3831 NZ_CP006568.1 Protein Homology CDS 4157794 4158708 . + 0 ID=cds4141;Parent=gene4200;Dbxref=Genbank:WP_038469159.1;Name=WP_038469159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469159.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4159031 4159885 . - . ID=gene4201;Name=SOPEG_RS20625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20625;pseudo=true NZ_CP006568.1 Protein Homology CDS 4159031 4159885 . - 0 ID=cds4142;Parent=gene4201;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4159993 4160415 . + . ID=gene4202;Name=SOPEG_RS20630;end_range=4160415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20630;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4159993 4160415 . + 0 ID=cds4143;Parent=gene4202;end_range=4160415,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=NADP oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4160415 4161477 . + . ID=id613;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4160476 4161399 . - . ID=gene4203;Name=SOPEG_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20635;old_locus_tag=SOPEG_3834 NZ_CP006568.1 Protein Homology CDS 4160476 4161399 . - 0 ID=cds4144;Parent=gene4203;Dbxref=Genbank:WP_025246756.1;Name=WP_025246756.1;gbkey=CDS;product=transposase;protein_id=WP_025246756.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4161426 4161689 . + . ID=gene4204;Name=SOPEG_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20640 NZ_CP006568.1 Protein Homology CDS 4161426 4161689 . + 0 ID=cds4145;Parent=gene4204;Dbxref=Genbank:WP_025246757.1;Name=WP_025246757.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246757.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4161962 4163032 . + . ID=id614;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4162045 4162968 . + . ID=gene4205;Name=SOPEG_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20645;old_locus_tag=SOPEG_3835 NZ_CP006568.1 Protein Homology CDS 4162045 4162968 . + 0 ID=cds4146;Parent=gene4205;Dbxref=Genbank:WP_025243834.1;Name=WP_025243834.1;gbkey=CDS;product=transposase;protein_id=WP_025243834.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4163525 4165913 . + . ID=id615;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4163682 4164665 . - . ID=gene4206;Name=SOPEG_RS23545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23545;old_locus_tag=SOPEG_ps3837;pseudo=true NZ_CP006568.1 Protein Homology CDS 4163682 4164665 . - 0 ID=cds4147;Parent=gene4206;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(4164258..4164260)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4164800 4165834 . - . ID=gene4207;Name=SOPEG_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20660 NZ_CP006568.1 Protein Homology CDS 4164800 4165834 . - 0 ID=cds4148;Parent=gene4207;Dbxref=Genbank:WP_025246760.1;Name=WP_025246760.1;gbkey=CDS;product=transposase;protein_id=WP_025246760.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4166227 4167551 . + . ID=id616;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4166265 4167348 . - . ID=gene4208;Name=SOPEG_RS23550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS23550;old_locus_tag=SOPEG_ps3838;pseudo=true NZ_CP006568.1 Protein Homology CDS 4166265 4167348 . - 0 ID=cds4149;Parent=gene4208;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4168218 4169021 . - . ID=gene4209;Name=SOPEG_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20670;old_locus_tag=SOPEG_3839 NZ_CP006568.1 Protein Homology CDS 4168218 4169021 . - 0 ID=cds4150;Parent=gene4209;Dbxref=Genbank:WP_038469162.1;Name=WP_038469162.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_038469162.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4169200 4170117 . - . ID=gene4210;Name=SOPEG_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20675 NZ_CP006568.1 Protein Homology CDS 4169200 4170117 . - 0 ID=cds4151;Parent=gene4210;Dbxref=Genbank:WP_025246762.1;Name=WP_025246762.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246762.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4170132 4171436 . - . ID=gene4211;Name=SOPEG_RS20680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20680;pseudo=true NZ_CP006568.1 Protein Homology CDS 4170132 4171436 . - 0 ID=cds4152;Parent=gene4211;Note=catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides;gbkey=CDS;product=alpha-galactosidase;pseudo=true;transl_except=(pos:complement(4170924..4170926)%2Caa:Other),(pos:complement(4170657..4170659)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4171465 4172322 . - . ID=gene4212;Name=SOPEG_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20685;old_locus_tag=SOPEG_3842 NZ_CP006568.1 Protein Homology CDS 4171465 4172322 . - 0 ID=cds4153;Parent=gene4212;Dbxref=Genbank:WP_025246763.1;Name=WP_025246763.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246763.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4172322 4173239 . - . ID=gene4213;Name=SOPEG_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20690 NZ_CP006568.1 Protein Homology CDS 4172322 4173239 . - 0 ID=cds4154;Parent=gene4213;Dbxref=Genbank:WP_025246764.1;Name=WP_025246764.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246764.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4173286 4174557 . - . ID=gene4214;Name=SOPEG_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20695;old_locus_tag=SOPEG_3844 NZ_CP006568.1 Protein Homology CDS 4173286 4174557 . - 0 ID=cds4155;Parent=gene4214;Dbxref=Genbank:WP_038470633.1;Name=WP_038470633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038470633.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4174941 4175729 . - . ID=gene4215;Name=SOPEG_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20700 NZ_CP006568.1 Protein Homology CDS 4174941 4175729 . - 0 ID=cds4156;Parent=gene4215;Dbxref=Genbank:WP_025246766.1;Name=WP_025246766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246766.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4176188 4176433 . + . ID=gene4216;Name=SOPEG_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20705 NZ_CP006568.1 Protein Homology CDS 4176188 4176433 . + 0 ID=cds4157;Parent=gene4216;Dbxref=Genbank:WP_025246767.1;Name=WP_025246767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246767.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4176384 4177722 . + . ID=id617;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4176446 4177633 . - . ID=gene4217;Name=SOPEG_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20710 NZ_CP006568.1 Protein Homology CDS 4176446 4177633 . - 0 ID=cds4158;Parent=gene4217;Dbxref=Genbank:WP_038469165.1;Name=WP_038469165.1;gbkey=CDS;product=transposase;protein_id=WP_038469165.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4177716 4178225 . + . ID=gene4218;Name=SOPEG_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20715 NZ_CP006568.1 Protein Homology CDS 4177716 4178225 . + 0 ID=cds4159;Parent=gene4218;Dbxref=Genbank:WP_025246768.1;Name=WP_025246768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246768.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4178119 4180677 . + . ID=id618;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4178275 4178547 . + . ID=gene4219;Name=SOPEG_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23555 NZ_CP006568.1 Protein Homology CDS 4178275 4178547 . + 0 ID=cds4160;Parent=gene4219;Dbxref=Genbank:WP_051419955.1;Name=WP_051419955.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419955.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4178557 4179462 . + . ID=gene4220;Name=SOPEG_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23560 NZ_CP006568.1 Protein Homology CDS 4178557 4179462 . + 0 ID=cds4161;Parent=gene4220;Dbxref=Genbank:WP_051419956.1;Name=WP_051419956.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419956.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4179518 4179793 . + . ID=gene4221;Name=SOPEG_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23565 NZ_CP006568.1 Protein Homology CDS 4179518 4179793 . + 0 ID=cds4162;Parent=gene4221;Dbxref=Genbank:WP_051419957.1;Name=WP_051419957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419957.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4179967 4180554 . + . ID=gene4222;Name=SOPEG_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20725 NZ_CP006568.1 Protein Homology CDS 4179967 4180554 . + 0 ID=cds4163;Parent=gene4222;Dbxref=Genbank:WP_051420016.1;Name=WP_051420016.1;gbkey=CDS;product=AAA family ATPase;protein_id=WP_051420016.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4180708 4181223 . + . ID=gene4223;Name=SOPEG_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20730 NZ_CP006568.1 Protein Homology CDS 4180708 4181223 . + 0 ID=cds4164;Parent=gene4223;Dbxref=Genbank:WP_025246770.1;Name=WP_025246770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246770.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4181356 4182677 . + . ID=id619;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4181431 4182493 . + . ID=gene4224;Name=SOPEG_RS20735;end_range=4182493,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20735;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4181431 4182493 . + 0 ID=cds4165;Parent=gene4224;end_range=4182493,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4183362 4185524 . + . ID=gene4225;Name=SOPEG_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20740;old_locus_tag=SOPEG_3852 NZ_CP006568.1 Protein Homology CDS 4183362 4185524 . + 0 ID=cds4166;Parent=gene4225;Dbxref=Genbank:WP_025246771.1;Name=WP_025246771.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_025246771.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4185680 4186753 . - . ID=gene4226;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=SOPEG_RS20745;old_locus_tag=SOPEG_3853 NZ_CP006568.1 Protein Homology CDS 4185680 4186753 . - 0 ID=cds4167;Parent=gene4226;Dbxref=Genbank:WP_025246772.1;Name=WP_025246772.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_025246772.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4186810 4187082 . - . ID=gene4227;Name=SOPEG_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20750;old_locus_tag=SOPEG_3854 NZ_CP006568.1 Protein Homology CDS 4186810 4187082 . - 0 ID=cds4168;Parent=gene4227;Dbxref=Genbank:WP_025246773.1;Name=WP_025246773.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=oxidative damage protection protein;protein_id=WP_025246773.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4187082 4188173 . - . ID=gene4228;Name=SOPEG_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20755;old_locus_tag=SOPEG_3855 NZ_CP006568.1 Protein Homology CDS 4187082 4188173 . - 0 ID=cds4169;Parent=gene4228;Dbxref=Genbank:WP_025246774.1;Name=WP_025246774.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_025246774.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4188342 4189061 . + . ID=gene4229;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=SOPEG_RS20760;old_locus_tag=SOPEG_3856 NZ_CP006568.1 Protein Homology CDS 4188342 4189061 . + 0 ID=cds4170;Parent=gene4229;Dbxref=Genbank:WP_025246775.1;Name=WP_025246775.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N7)-methyltransferase;protein_id=WP_025246775.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4189183 4191792 . + . ID=id620;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4189388 4190134 . + . ID=gene4230;Name=SOPEG_RS20765;end_range=4190134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20765;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4189388 4190134 . + 0 ID=cds4171;Parent=gene4230;end_range=4190134,.;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_except=(pos:4189934..4189936%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4190916 4191665 . + . ID=gene4231;Name=SOPEG_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20770 NZ_CP006568.1 Protein Homology CDS 4190916 4191665 . + 0 ID=cds4172;Parent=gene4231;Dbxref=Genbank:WP_051419958.1;Name=WP_051419958.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419958.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4191746 4192377 . + . ID=gene4232;Name=SOPEG_RS20775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20775;pseudo=true NZ_CP006568.1 Protein Homology CDS 4191746 4192377 . + 0 ID=cds4173;Parent=gene4232;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4192574 4193107 . - . ID=gene4233;Name=SOPEG_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20780 NZ_CP006568.1 Protein Homology CDS 4192574 4193107 . - 0 ID=cds4174;Parent=gene4233;Dbxref=Genbank:WP_025246777.1;Name=WP_025246777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246777.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4193100 4193693 . - . ID=gene4234;Name=SOPEG_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20785;old_locus_tag=SOPEG_3861 NZ_CP006568.1 Protein Homology CDS 4193100 4193693 . - 0 ID=cds4175;Parent=gene4234;Dbxref=Genbank:WP_025246778.1;Name=WP_025246778.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=nucleoside-triphosphate diphosphatase;protein_id=WP_025246778.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4193753 4194050 . - . ID=gene4235;Name=SOPEG_RS20790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20790;pseudo=true NZ_CP006568.1 Protein Homology CDS 4193753 4194050 . - 0 ID=cds4176;Parent=gene4235;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4194056 4194595 . - . ID=gene4236;Name=SOPEG_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20795;old_locus_tag=SOPEG_3863 NZ_CP006568.1 Protein Homology CDS 4194056 4194595 . - 0 ID=cds4177;Parent=gene4236;Dbxref=Genbank:WP_038469172.1;Name=WP_038469172.1;gbkey=CDS;product=membrane protein;protein_id=WP_038469172.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4194648 4195469 . - . ID=gene4237;Name=SOPEG_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20800;old_locus_tag=SOPEG_3864 NZ_CP006568.1 Protein Homology CDS 4194648 4195469 . - 0 ID=cds4178;Parent=gene4237;Dbxref=Genbank:WP_025246779.1;Name=WP_025246779.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_025246779.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4195508 4196203 . - . ID=gene4238;Name=SOPEG_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20805;old_locus_tag=SOPEG_3865 NZ_CP006568.1 Protein Homology CDS 4195508 4196203 . - 0 ID=cds4179;Parent=gene4238;Dbxref=Genbank:WP_038469175.1;Name=WP_038469175.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_038469175.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4196220 4197176 . + . ID=gene4239;Name=SOPEG_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20810;old_locus_tag=SOPEG_3866 NZ_CP006568.1 Protein Homology CDS 4196220 4197176 . + 0 ID=cds4180;Parent=gene4239;Dbxref=Genbank:WP_025246780.1;Name=WP_025246780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246780.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4197451 4197732 . + . ID=gene4240;Name=SOPEG_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20815;old_locus_tag=SOPEG_3867 NZ_CP006568.1 Protein Homology CDS 4197451 4197732 . + 0 ID=cds4181;Parent=gene4240;Dbxref=Genbank:WP_038470663.1;Name=WP_038470663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038470663.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4197999 4199033 . + . ID=gene4241;Name=SOPEG_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20820;old_locus_tag=SOPEG_3868 NZ_CP006568.1 Protein Homology CDS 4197999 4199033 . + 0 ID=cds4182;Parent=gene4241;Dbxref=Genbank:WP_025246781.1;Name=WP_025246781.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=rhamnose:proton symporter;protein_id=WP_025246781.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4199156 4200010 . - . ID=gene4242;Name=SOPEG_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20825;old_locus_tag=SOPEG_3869 NZ_CP006568.1 Protein Homology CDS 4199156 4200010 . - 0 ID=cds4183;Parent=gene4242;Dbxref=Genbank:WP_025246782.1;Name=WP_025246782.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246782.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4200156 4200980 . - . ID=gene4243;Name=SOPEG_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20830;old_locus_tag=SOPEG_3870 NZ_CP006568.1 Protein Homology CDS 4200156 4200980 . - 0 ID=cds4184;Parent=gene4243;Dbxref=Genbank:WP_025246783.1;Name=WP_025246783.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_025246783.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4201297 4202538 . + . ID=gene4244;Name=SOPEG_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20835 NZ_CP006568.1 Protein Homology CDS 4201297 4202538 . + 0 ID=cds4185;Parent=gene4244;Dbxref=Genbank:WP_038469178.1;Name=WP_038469178.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_038469178.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4202535 4203791 . + . ID=gene4245;Name=SOPEG_RS20840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20840;pseudo=true NZ_CP006568.1 Protein Homology CDS 4202535 4203791 . + 0 ID=cds4186;Parent=gene4245;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=sugar isomerase;pseudo=true;transl_except=(pos:4202754..4202756%2Caa:Other),(pos:4203684..4203686%2Caa:Other),(pos:4203687..4203689%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4203804 4204638 . + . ID=gene4246;Name=SOPEG_RS20845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20845;pseudo=true NZ_CP006568.1 Protein Homology CDS 4203804 4204638 . + 0 ID=cds4187;Parent=gene4246;exception=annotated by transcript or proteomic data;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4204652 4204966 . + . ID=gene4247;Name=SOPEG_RS20850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20850;pseudo=true NZ_CP006568.1 Protein Homology CDS 4204652 4204966 . + 0 ID=cds4188;Parent=gene4247;gbkey=CDS;product=L-rhamnose mutarotase;pseudo=true;transl_except=(pos:4204754..4204756%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4205136 4205561 . - . ID=gene4248;Name=SOPEG_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20855;old_locus_tag=SOPEG_3875 NZ_CP006568.1 Protein Homology CDS 4205136 4205561 . - 0 ID=cds4189;Parent=gene4248;Dbxref=Genbank:WP_025246785.1;Name=WP_025246785.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_025246785.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4205561 4206124 . - . ID=gene4249;Name=SOPEG_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20860;old_locus_tag=SOPEG_3876 NZ_CP006568.1 Protein Homology CDS 4205561 4206124 . - 0 ID=cds4190;Parent=gene4249;Dbxref=Genbank:WP_025246786.1;Name=WP_025246786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246786.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4206240 4207196 . - . ID=gene4250;Name=SOPEG_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20865;old_locus_tag=SOPEG_3877 NZ_CP006568.1 Protein Homology CDS 4206240 4207196 . - 0 ID=cds4191;Parent=gene4250;Dbxref=Genbank:WP_025246787.1;Name=WP_025246787.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_025246787.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4207208 4207933 . - . ID=gene4251;Name=SOPEG_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20870;old_locus_tag=SOPEG_3878 NZ_CP006568.1 Protein Homology CDS 4207208 4207933 . - 0 ID=cds4192;Parent=gene4251;Dbxref=Genbank:WP_025246788.1;Name=WP_025246788.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_025246788.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4208028 4208732 . - . ID=gene4252;Name=SOPEG_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20875;old_locus_tag=SOPEG_3879 NZ_CP006568.1 Protein Homology CDS 4208028 4208732 . - 0 ID=cds4193;Parent=gene4252;Dbxref=Genbank:WP_025246789.1;Name=WP_025246789.1;gbkey=CDS;product=DNA-specific endonuclease I;protein_id=WP_025246789.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4208844 4209359 . - . ID=gene4253;Name=SOPEG_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20880;old_locus_tag=SOPEG_3880 NZ_CP006568.1 Protein Homology CDS 4208844 4209359 . - 0 ID=cds4194;Parent=gene4253;Dbxref=Genbank:WP_025246790.1;Name=WP_025246790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246790.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4209577 4211295 . + . ID=id621;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4209645 4210865 . + . ID=gene4254;Name=SOPEG_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20885;old_locus_tag=SOPEG_3881 NZ_CP006568.1 Protein Homology CDS 4209645 4210865 . + 0 ID=cds4195;Parent=gene4254;Dbxref=Genbank:WP_025246791.1;Name=WP_025246791.1;gbkey=CDS;product=transposase;protein_id=WP_025246791.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4211419 4212778 . - . ID=gene4255;Name=SOPEG_RS20890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20890;pseudo=true NZ_CP006568.1 Protein Homology CDS 4211419 4212778 . - 0 ID=cds4196;Parent=gene4255;exception=annotated by transcript or proteomic data;gbkey=CDS;product=D-galactose transporter GalP;pseudo=true;transl_except=(pos:complement(4212106..4212108)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4213449 4214615 . - . ID=gene4256;Name=SOPEG_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20895;old_locus_tag=SOPEG_3883 NZ_CP006568.1 Protein Homology CDS 4213449 4214615 . - 0 ID=cds4197;Parent=gene4256;Dbxref=Genbank:WP_025246792.1;Name=WP_025246792.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthetase;protein_id=WP_025246792.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4215427 4217374 . + . ID=gene4257;Name=SOPEG_RS20900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20900;pseudo=true NZ_CP006568.1 Protein Homology CDS 4215427 4217374 . + 0 ID=cds4198;Parent=gene4257;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arginine decarboxylase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4217394 4218307 . + . ID=gene4258;Name=SOPEG_RS20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20905;pseudo=true NZ_CP006568.1 Protein Homology CDS 4217394 4218307 . + 0 ID=cds4199;Parent=gene4258;Note=catalyzes the formation of putrescine from agmatine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=agmatinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4218477 4219415 . - . ID=gene4259;Name=SOPEG_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20910 NZ_CP006568.1 Protein Homology CDS 4218477 4219415 . - 0 ID=cds4200;Parent=gene4259;Dbxref=Genbank:WP_025246793.1;Name=WP_025246793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246793.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4219446 4219715 . - . ID=gene4260;Name=SOPEG_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20915 NZ_CP006568.1 Protein Homology CDS 4219446 4219715 . - 0 ID=cds4201;Parent=gene4260;Dbxref=Genbank:WP_025246794.1;Name=WP_025246794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246794.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4220563 4221726 . + . ID=gene4261;Name=SOPEG_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20920;old_locus_tag=SOPEG_3887 NZ_CP006568.1 Protein Homology CDS 4220563 4221726 . + 0 ID=cds4202;Parent=gene4261;Dbxref=Genbank:WP_025246795.1;Name=WP_025246795.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_025246795.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4221841 4222917 . + . ID=gene4262;Name=SOPEG_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20925;old_locus_tag=SOPEG_3888 NZ_CP006568.1 Protein Homology CDS 4221841 4222917 . + 0 ID=cds4203;Parent=gene4262;Dbxref=Genbank:WP_025246796.1;Name=WP_025246796.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_025246796.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4223277 4224245 . + . ID=gene4263;Name=SOPEG_RS20930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20930;pseudo=true NZ_CP006568.1 Protein Homology CDS 4223277 4224245 . + 0 ID=cds4204;Parent=gene4263;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;pseudo=true;transl_except=(pos:4223916..4223918%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4224552 4225140 . + . ID=gene4264;Name=SOPEG_RS20935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20935;pseudo=true NZ_CP006568.1 Protein Homology CDS 4224552 4225140 . + 0 ID=cds4205;Parent=gene4264;Note=Involved in the export of arginine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arginine transporter;pseudo=true;transl_except=(pos:4224735..4224737%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4225331 4226056 . + . ID=gene4265;Name=SOPEG_RS20940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20940;pseudo=true NZ_CP006568.1 Protein Homology CDS 4225331 4226056 . + 0 ID=cds4206;Parent=gene4265;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4225616..4225618%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4226203 4227092 . - . ID=gene4266;Name=SOPEG_RS20945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20945;pseudo=true NZ_CP006568.1 Protein Homology CDS 4226203 4227092 . - 0 ID=cds4207;Parent=gene4266;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chromosome replication initiation inhibitor protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4227277 4227933 . + . ID=gene4267;Name=SOPEG_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20950;old_locus_tag=SOPEG_3893 NZ_CP006568.1 Protein Homology CDS 4227277 4227933 . + 0 ID=cds4208;Parent=gene4267;Dbxref=Genbank:WP_025246799.1;Name=WP_025246799.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_025246799.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4228228 4229460 . + . ID=gene4268;Name=SOPEG_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20955;old_locus_tag=SOPEG_3894 NZ_CP006568.1 Protein Homology CDS 4228228 4229460 . + 0 ID=cds4209;Parent=gene4268;Dbxref=Genbank:WP_025246800.1;Name=WP_025246800.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_025246800.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4229624 4230295 . - . ID=gene4269;Name=SOPEG_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20960;old_locus_tag=SOPEG_3895 NZ_CP006568.1 Protein Homology CDS 4229624 4230295 . - 0 ID=cds4210;Parent=gene4269;Dbxref=Genbank:WP_025246801.1;Name=WP_025246801.1;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_025246801.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4230551 4230880 . - . ID=gene4270;Name=SOPEG_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20965;old_locus_tag=SOPEG_3896 NZ_CP006568.1 Protein Homology CDS 4230551 4230880 . - 0 ID=cds4211;Parent=gene4270;Dbxref=Genbank:WP_025246802.1;Name=WP_025246802.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_025246802.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4231058 4231631 . + . ID=gene4271;Name=SOPEG_RS20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS20970;pseudo=true NZ_CP006568.1 Protein Homology CDS 4231058 4231631 . + 0 ID=cds4212;Parent=gene4271;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4231707 4233026 . + . ID=gene4272;Name=SOPEG_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20975;old_locus_tag=SOPEG_3898 NZ_CP006568.1 Protein Homology CDS 4231707 4233026 . + 0 ID=cds4213;Parent=gene4272;Dbxref=Genbank:WP_025246803.1;Name=WP_025246803.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_025246803.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4233023 4234201 . + . ID=gene4273;Name=SOPEG_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20980;old_locus_tag=SOPEG_3899 NZ_CP006568.1 Protein Homology CDS 4233023 4234201 . + 0 ID=cds4214;Parent=gene4273;Dbxref=Genbank:WP_025246804.1;Name=WP_025246804.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_025246804.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4234233 4235450 . + . ID=gene4274;Name=SOPEG_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20985;old_locus_tag=SOPEG_3900 NZ_CP006568.1 Protein Homology CDS 4234233 4235450 . + 0 ID=cds4215;Parent=gene4274;Dbxref=Genbank:WP_025246805.1;Name=WP_025246805.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_025246805.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4235807 4236907 . + . ID=gene4275;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=SOPEG_RS20990;old_locus_tag=SOPEG_3901 NZ_CP006568.1 Protein Homology CDS 4235807 4236907 . + 0 ID=cds4216;Parent=gene4275;Dbxref=Genbank:WP_025246806.1;Name=WP_025246806.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=glycine cleavage system protein T;protein_id=WP_025246806.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4236934 4237329 . + . ID=gene4276;Name=SOPEG_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS20995;old_locus_tag=SOPEG_3902 NZ_CP006568.1 Protein Homology CDS 4236934 4237329 . + 0 ID=cds4217;Parent=gene4276;Dbxref=Genbank:WP_025246807.1;Name=WP_025246807.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_025246807.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4237408 4240199 . + . ID=gene4277;Name=SOPEG_RS21000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21000;pseudo=true NZ_CP006568.1 Protein Homology CDS 4237408 4240199 . + 0 ID=cds4218;Parent=gene4277;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glycine dehydrogenase;pseudo=true;transl_except=(pos:4238301..4238303%2Caa:Other),(pos:4239246..4239248%2Caa:Other),(pos:4239663..4239665%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4240376 4240984 . - . ID=gene4278;Name=SOPEG_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21005;old_locus_tag=SOPEG_3904 NZ_CP006568.1 Protein Homology CDS 4240376 4240984 . - 0 ID=cds4219;Parent=gene4278;Dbxref=Genbank:WP_025246812.1;Name=WP_025246812.1;gbkey=CDS;product=hydrolase;protein_id=WP_025246812.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4241192 4241842 . + . ID=gene4279;Name=SOPEG_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21010;old_locus_tag=SOPEG_3905 NZ_CP006568.1 Protein Homology CDS 4241192 4241842 . + 0 ID=cds4220;Parent=gene4279;Dbxref=Genbank:WP_025246813.1;Name=WP_025246813.1;gbkey=CDS;product=hemolysin;protein_id=WP_025246813.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4241953 4242939 . - . ID=gene4280;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=SOPEG_RS21015;old_locus_tag=SOPEG_3906 NZ_CP006568.1 Protein Homology CDS 4241953 4242939 . - 0 ID=cds4221;Parent=gene4280;Dbxref=Genbank:WP_025246814.1;Name=WP_025246814.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=global regulator;protein_id=WP_025246814.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4243152 4243418 . + . ID=gene4281;Name=SOPEG_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21020;old_locus_tag=SOPEG_3907 NZ_CP006568.1 Protein Homology CDS 4243152 4243418 . + 0 ID=cds4222;Parent=gene4281;Dbxref=Genbank:WP_025246815.1;Name=WP_025246815.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246815.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4243399 4243806 . + . ID=gene4282;Name=SOPEG_RS21025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21025;pseudo=true NZ_CP006568.1 Protein Homology CDS 4243399 4243806 . + 0 ID=cds4223;Parent=gene4282;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4243441..4243443%2Caa:Other),(pos:4243522..4243524%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4243846 4244364 . - . ID=gene4283;Name=SOPEG_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21030;old_locus_tag=SOPEG_3909 NZ_CP006568.1 Protein Homology CDS 4243846 4244364 . - 0 ID=cds4224;Parent=gene4283;Dbxref=Genbank:WP_025246816.1;Name=WP_025246816.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin FldB;protein_id=WP_025246816.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4244466 4245365 . + . ID=gene4284;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SOPEG_RS21035;old_locus_tag=SOPEG_3910 NZ_CP006568.1 Protein Homology CDS 4244466 4245365 . + 0 ID=cds4225;Parent=gene4284;Dbxref=Genbank:WP_025246817.1;Name=WP_025246817.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase XerD;protein_id=WP_025246817.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4245441 4246157 . + . ID=gene4285;Name=SOPEG_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21040;old_locus_tag=SOPEG_3911 NZ_CP006568.1 Protein Homology CDS 4245441 4246157 . + 0 ID=cds4226;Parent=gene4285;Dbxref=Genbank:WP_025246818.1;Name=WP_025246818.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_025246818.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4246165 4247901 . + . ID=gene4286;Name=SOPEG_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21045;old_locus_tag=SOPEG_3912 NZ_CP006568.1 Protein Homology CDS 4246165 4247901 . + 0 ID=cds4227;Parent=gene4286;Dbxref=Genbank:WP_025246819.1;Name=WP_025246819.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_025246819.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4248180 4249112 . + . ID=gene4287;Name=SOPEG_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21050 NZ_CP006568.1 Protein Homology CDS 4248180 4249112 . + 0 ID=cds4228;Parent=gene4287;Dbxref=Genbank:WP_025246820.1;Name=WP_025246820.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_025246820.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4249122 4250642 . + . ID=gene4288;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SOPEG_RS21055;old_locus_tag=SOPEG_3914 NZ_CP006568.1 Protein Homology CDS 4249122 4250642 . + 0 ID=cds4229;Parent=gene4288;Dbxref=Genbank:WP_025246821.1;Name=WP_025246821.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_025246821.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4251310 4252754 . + . ID=gene4289;Name=SOPEG_RS21060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21060;pseudo=true NZ_CP006568.1 Protein Homology CDS 4251310 4252754 . + 0 ID=cds4230;Parent=gene4289;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amidohydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4252791 4253507 . + . ID=gene4290;Name=SOPEG_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21065;old_locus_tag=SOPEG_3916 NZ_CP006568.1 Protein Homology CDS 4252791 4253507 . + 0 ID=cds4231;Parent=gene4290;Dbxref=Genbank:WP_025246822.1;Name=WP_025246822.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_025246822.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4253507 4254229 . + . ID=gene4291;Name=SOPEG_RS21070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21070;pseudo=true NZ_CP006568.1 Protein Homology CDS 4253507 4254229 . + 0 ID=cds4232;Parent=gene4291;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4254303 4255160 . + . ID=gene4292;Name=SOPEG_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21075;old_locus_tag=SOPEG_3918 NZ_CP006568.1 Protein Homology CDS 4254303 4255160 . + 0 ID=cds4233;Parent=gene4292;Dbxref=Genbank:WP_025246823.1;Name=WP_025246823.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_025246823.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4255193 4256256 . + . ID=id622;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4255272 4256195 . + . ID=gene4293;Name=SOPEG_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21080;old_locus_tag=SOPEG_3919 NZ_CP006568.1 Protein Homology CDS 4255272 4256195 . + 0 ID=cds4234;Parent=gene4293;Dbxref=Genbank:WP_025246824.1;Name=WP_025246824.1;gbkey=CDS;product=transposase;protein_id=WP_025246824.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4256505 4257443 . + . ID=gene4294;Name=SOPEG_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21085;old_locus_tag=SOPEG_3921 NZ_CP006568.1 Protein Homology CDS 4256505 4257443 . + 0 ID=cds4235;Parent=gene4294;Dbxref=Genbank:WP_025246825.1;Name=WP_025246825.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_025246825.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4257440 4257940 . + . ID=gene4295;Name=SOPEG_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21090;old_locus_tag=SOPEG_3922 NZ_CP006568.1 Protein Homology CDS 4257440 4257940 . + 0 ID=cds4236;Parent=gene4295;Dbxref=Genbank:WP_025246826.1;Name=WP_025246826.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_025246826.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4257953 4258840 . + . ID=gene4296;Name=SOPEG_RS21095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21095;pseudo=true NZ_CP006568.1 Protein Homology CDS 4257953 4258840 . + 0 ID=cds4237;Parent=gene4296;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4258034..4258036%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4258837 4259983 . + . ID=gene4297;Name=SOPEG_RS21100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21100;pseudo=true NZ_CP006568.1 Protein Homology CDS 4258837 4259983 . + 0 ID=cds4238;Parent=gene4297;exception=annotated by transcript or proteomic data;gbkey=CDS;product=racemase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4260048 4260956 . + . ID=gene4298;Name=SOPEG_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21105 NZ_CP006568.1 Protein Homology CDS 4260048 4260956 . + 0 ID=cds4239;Parent=gene4298;Dbxref=Genbank:WP_051419959.1;Name=WP_051419959.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_051419959.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4261167 4261742 . + . ID=gene4299;Name=SOPEG_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23570 NZ_CP006568.1 Protein Homology CDS 4261167 4261742 . + 0 ID=cds4240;Parent=gene4299;Dbxref=Genbank:WP_051419960.1;Name=WP_051419960.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419960.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4261842 4262276 . + . ID=gene4300;Name=SOPEG_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23575 NZ_CP006568.1 Protein Homology CDS 4261842 4262276 . + 0 ID=cds4241;Parent=gene4300;Dbxref=Genbank:WP_051419961.1;Name=WP_051419961.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419961.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4262254 4269780 . + . ID=id623;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4262337 4263140 . + . ID=gene4301;Name=SOPEG_RS21115;end_range=4263140,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21115;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4262337 4263140 . + 0 ID=cds4242;Parent=gene4301;end_range=4263140,.;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_except=(pos:4262745..4262747%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4263621 4264496 . - . ID=gene4302;Name=SOPEG_RS21120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21120;partial=true;pseudo=true;start_range=.,4263621 NZ_CP006568.1 Protein Homology CDS 4263621 4264496 . - 0 ID=cds4243;Parent=gene4302;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,4263621;transl_table=11 NZ_CP006568.1 RefSeq gene 4264544 4265011 . - . ID=gene4303;Name=SOPEG_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21125 NZ_CP006568.1 Protein Homology CDS 4264544 4265011 . - 0 ID=cds4244;Parent=gene4303;Dbxref=Genbank:WP_038469183.1;Name=WP_038469183.1;gbkey=CDS;product=transposase;protein_id=WP_038469183.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4265078 4265275 . - . ID=gene4304;Name=SOPEG_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21130 NZ_CP006568.1 Protein Homology CDS 4265078 4265275 . - 0 ID=cds4245;Parent=gene4304;Dbxref=Genbank:WP_025246829.1;Name=WP_025246829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246829.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4265408 4266925 . + . ID=gene4305;Name=SOPEG_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21135;old_locus_tag=SOPEG_3931 NZ_CP006568.1 Protein Homology CDS 4265408 4266925 . + 0 ID=cds4246;Parent=gene4305;Dbxref=Genbank:WP_025246830.1;Name=WP_025246830.1;gbkey=CDS;product=transposase;protein_id=WP_025246830.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4266937 4267692 . + . ID=gene4306;Name=SOPEG_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21140;old_locus_tag=SOPEG_3932 NZ_CP006568.1 Protein Homology CDS 4266937 4267692 . + 0 ID=cds4247;Parent=gene4306;Dbxref=Genbank:WP_025246831.1;Name=WP_025246831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246831.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4267730 4267912 . - . ID=gene4307;Name=SOPEG_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21145 NZ_CP006568.1 Protein Homology CDS 4267730 4267912 . - 0 ID=cds4248;Parent=gene4307;Dbxref=Genbank:WP_025246832.1;Name=WP_025246832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246832.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4268136 4269218 . + . ID=gene4308;Name=SOPEG_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21150;old_locus_tag=SOPEG_3933 NZ_CP006568.1 Protein Homology CDS 4268136 4269218 . + 0 ID=cds4249;Parent=gene4308;Dbxref=Genbank:WP_025246833.1;Name=WP_025246833.1;gbkey=CDS;product=transposase;protein_id=WP_025246833.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4269251 4269703 . - . ID=gene4309;Name=SOPEG_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21155 NZ_CP006568.1 Protein Homology CDS 4269251 4269703 . - 0 ID=cds4250;Parent=gene4309;Dbxref=Genbank:WP_025246834.1;Name=WP_025246834.1;gbkey=CDS;product=transposase;protein_id=WP_025246834.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4270332 4270976 . + . ID=gene4310;Name=SOPEG_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21160 NZ_CP006568.1 GeneMarkS+ CDS 4270332 4270976 . + 0 ID=cds4251;Parent=gene4310;Dbxref=Genbank:WP_025246835.1;Name=WP_025246835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246835.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4270828 4273114 . + . ID=id624;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4270997 4271572 . + . ID=gene4311;Name=SOPEG_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21165 NZ_CP006568.1 GeneMarkS+ CDS 4270997 4271572 . + 0 ID=cds4252;Parent=gene4311;Dbxref=Genbank:WP_025246836.1;Name=WP_025246836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246836.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4271792 4272091 . - . ID=gene4312;Name=SOPEG_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21170;old_locus_tag=SOPEG_3937 NZ_CP006568.1 Protein Homology CDS 4271792 4272091 . - 0 ID=cds4253;Parent=gene4312;Dbxref=Genbank:WP_025244882.1;Name=WP_025244882.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025244882.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4272173 4273310 . - . ID=gene4313;Name=SOPEG_RS21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21175;pseudo=true NZ_CP006568.1 Protein Homology CDS 4272173 4273310 . - 0 ID=cds4254;Parent=gene4313;exception=annotated by transcript or proteomic data;gbkey=CDS;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4273136 4273262 . + . ID=id625;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4273458 4274456 . + . ID=gene4314;Name=SOPEG_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21180;old_locus_tag=SOPEG_3939 NZ_CP006568.1 Protein Homology CDS 4273458 4274456 . + 0 ID=cds4255;Parent=gene4314;Dbxref=Genbank:WP_025246837.1;Name=WP_025246837.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_025246837.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4274456 4275193 . + . ID=gene4315;Name=SOPEG_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21185;old_locus_tag=SOPEG_3940 NZ_CP006568.1 Protein Homology CDS 4274456 4275193 . + 0 ID=cds4256;Parent=gene4315;Dbxref=Genbank:WP_025246838.1;Name=WP_025246838.1;Note=Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_025246838.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4274708 4276470 . + . ID=id626;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4275431 4276377 . + . ID=gene4316;Name=SOPEG_RS21190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21190;pseudo=true NZ_CP006568.1 Protein Homology CDS 4275431 4276377 . + 0 ID=cds4257;Parent=gene4316;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4276524 4277078 . - . ID=gene4317;Name=SOPEG_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21195;old_locus_tag=SOPEG_3942 NZ_CP006568.1 Protein Homology CDS 4276524 4277078 . - 0 ID=cds4258;Parent=gene4317;Dbxref=Genbank:WP_025246839.1;Name=WP_025246839.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246839.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4276528 4283835 . + . ID=id627;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4277179 4278598 . - . ID=gene4318;Name=SOPEG_RS21200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21200;pseudo=true NZ_CP006568.1 Protein Homology CDS 4277179 4278598 . - 0 ID=cds4259;Parent=gene4318;exception=annotated by transcript or proteomic data;gbkey=CDS;product=altronate hydrolase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4278612 4280063 . - . ID=gene4319;Name=SOPEG_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21205;old_locus_tag=SOPEG_3944 NZ_CP006568.1 Protein Homology CDS 4278612 4280063 . - 0 ID=cds4260;Parent=gene4319;Dbxref=Genbank:WP_025246840.1;Name=WP_025246840.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_025246840.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4280124 4281092 . - . ID=gene4320;Name=SOPEG_RS21210;end_range=4281092,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21210;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4280124 4281092 . - 0 ID=cds4261;Parent=gene4320;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;end_range=4281092,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glucuronate isomerase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4281199 4281444 . - . ID=gene4321;Name=SOPEG_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23580 NZ_CP006568.1 Protein Homology CDS 4281199 4281444 . - 0 ID=cds4262;Parent=gene4321;Dbxref=Genbank:WP_051419377.1;Name=WP_051419377.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419377.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4281529 4281777 . - . ID=gene4322;Name=SOPEG_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23585 NZ_CP006568.1 Protein Homology CDS 4281529 4281777 . - 0 ID=cds4263;Parent=gene4322;Dbxref=Genbank:WP_051419376.1;Name=WP_051419376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419376.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4282854 4283778 . + . ID=gene4323;Name=SOPEG_RS21220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21220;pseudo=true NZ_CP006568.1 Protein Homology CDS 4282854 4283778 . + 0 ID=cds4264;Parent=gene4323;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4284291 4285354 . + . ID=id628;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4284350 4285273 . - . ID=gene4324;Name=SOPEG_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21225;old_locus_tag=SOPEG_3949 NZ_CP006568.1 Protein Homology CDS 4284350 4285273 . - 0 ID=cds4265;Parent=gene4324;Dbxref=Genbank:WP_025243865.1;Name=WP_025243865.1;gbkey=CDS;product=transposase;protein_id=WP_025243865.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4285480 4286058 . + . ID=id629;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 4286061 4287122 . + . ID=id630;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4286140 4287063 . + . ID=gene4325;Name=SOPEG_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21230;old_locus_tag=SOPEG_3950 NZ_CP006568.1 Protein Homology CDS 4286140 4287063 . + 0 ID=cds4266;Parent=gene4325;Dbxref=Genbank:WP_025246842.1;Name=WP_025246842.1;gbkey=CDS;product=transposase;protein_id=WP_025246842.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4287124 4289189 . + . ID=id631;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4287165 4287617 . + . ID=gene4326;Name=SOPEG_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21235 NZ_CP006568.1 Protein Homology CDS 4287165 4287617 . + 0 ID=cds4267;Parent=gene4326;Dbxref=Genbank:WP_025246843.1;Name=WP_025246843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246843.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4287907 4289115 . - . ID=gene4327;Name=SOPEG_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21240;old_locus_tag=SOPEG_3952 NZ_CP006568.1 Protein Homology CDS 4287907 4289115 . - 0 ID=cds4268;Parent=gene4327;Dbxref=Genbank:WP_025246844.1;Name=WP_025246844.1;gbkey=CDS;product=transposase;protein_id=WP_025246844.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4289247 4289957 . + . ID=gene4328;Name=SOPEG_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21245 NZ_CP006568.1 Protein Homology CDS 4289247 4289957 . + 0 ID=cds4269;Parent=gene4328;Dbxref=Genbank:WP_051419962.1;Name=WP_051419962.1;gbkey=CDS;product=integrase;protein_id=WP_051419962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4289973 4290049 . - . ID=gene4329;Name=SOPEG_RS21250;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS21250;old_locus_tag=SOPEG_t3954 NZ_CP006568.1 tRNAscan-SE tRNA 4289973 4290049 . - . ID=rna59;Parent=gene4329;anticodon=(pos:complement(4290013..4290015));gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 tRNAscan-SE exon 4289973 4290049 . - . ID=id632;Parent=rna59;anticodon=(pos:complement(4290013..4290015));gbkey=tRNA;product=tRNA-Arg NZ_CP006568.1 RefSeq gene 4290233 4291105 . + . ID=gene4330;Name=SOPEG_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21255;old_locus_tag=SOPEG_3955 NZ_CP006568.1 Protein Homology CDS 4290233 4291105 . + 0 ID=cds4270;Parent=gene4330;Dbxref=Genbank:WP_025246846.1;Name=WP_025246846.1;gbkey=CDS;product=methenyltetrahydrofolate cyclohydrolase;protein_id=WP_025246846.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4291108 4291320 . + . ID=gene4331;Name=SOPEG_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21260;old_locus_tag=SOPEG_3956 NZ_CP006568.1 Protein Homology CDS 4291108 4291320 . + 0 ID=cds4271;Parent=gene4331;Dbxref=Genbank:WP_025246847.1;Name=WP_025246847.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_025246847.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4291407 4292792 . - . ID=gene4332;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SOPEG_RS21265;old_locus_tag=SOPEG_3957 NZ_CP006568.1 Protein Homology CDS 4291407 4292792 . - 0 ID=cds4272;Parent=gene4332;Dbxref=Genbank:WP_025246848.1;Name=WP_025246848.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=WP_025246848.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4293057 4293551 . + . ID=gene4333;Name=SOPEG_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21270;old_locus_tag=SOPEG_3958 NZ_CP006568.1 Protein Homology CDS 4293057 4293551 . + 0 ID=cds4273;Parent=gene4333;Dbxref=Genbank:WP_025246849.1;Name=WP_025246849.1;gbkey=CDS;product=peptidylprolyl isomerase;protein_id=WP_025246849.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4293562 4294281 . + . ID=gene4334;Name=SOPEG_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21275;old_locus_tag=SOPEG_3959 NZ_CP006568.1 Protein Homology CDS 4293562 4294281 . + 0 ID=cds4274;Parent=gene4334;Dbxref=Genbank:WP_025246850.1;Name=WP_025246850.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_025246850.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4294421 4294843 . - . ID=gene4335;Name=SOPEG_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21280;old_locus_tag=SOPEG_3960 NZ_CP006568.1 Protein Homology CDS 4294421 4294843 . - 0 ID=cds4275;Parent=gene4335;Dbxref=Genbank:WP_025246851.1;Name=WP_025246851.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246851.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4295077 4295586 . + . ID=gene4336;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SOPEG_RS21285;old_locus_tag=SOPEG_3961 NZ_CP006568.1 Protein Homology CDS 4295077 4295586 . + 0 ID=cds4276;Parent=gene4336;Dbxref=Genbank:WP_025246852.1;Name=WP_025246852.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_025246852.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4295583 4296653 . + . ID=gene4337;Name=SOPEG_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21290;old_locus_tag=SOPEG_3962 NZ_CP006568.1 Protein Homology CDS 4295583 4296653 . + 0 ID=cds4277;Parent=gene4337;Dbxref=Genbank:WP_025246853.1;Name=WP_025246853.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_025246853.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4296765 4298999 . - . ID=gene4338;Name=SOPEG_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21295;old_locus_tag=SOPEG_3963 NZ_CP006568.1 Protein Homology CDS 4296765 4298999 . - 0 ID=cds4278;Parent=gene4338;Dbxref=Genbank:WP_025246854.1;Name=WP_025246854.1;Note=NADP-specific%2C catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_025246854.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4299300 4301751 . - . ID=gene4339;Name=SOPEG_RS21300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21300;pseudo=true NZ_CP006568.1 Protein Homology CDS 4299300 4301751 . - 0 ID=cds4279;Parent=gene4339;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter permease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4301748 4302349 . - . ID=gene4340;Name=SOPEG_RS21305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21305;pseudo=true NZ_CP006568.1 Protein Homology CDS 4301748 4302349 . - 0 ID=cds4280;Parent=gene4340;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(4301999..4302001)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4302287 4302853 . + . ID=gene4341;Name=SOPEG_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21310 NZ_CP006568.1 Protein Homology CDS 4302287 4302853 . + 0 ID=cds4281;Parent=gene4341;Dbxref=Genbank:WP_025246857.1;Name=WP_025246857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246857.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4302882 4303658 . + . ID=gene4342;Name=SOPEG_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21315;old_locus_tag=SOPEG_3967 NZ_CP006568.1 Protein Homology CDS 4302882 4303658 . + 0 ID=cds4282;Parent=gene4342;Dbxref=Genbank:WP_025246858.1;Name=WP_025246858.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_025246858.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4303710 4304564 . + . ID=gene4343;Name=SOPEG_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21320;old_locus_tag=SOPEG_3968 NZ_CP006568.1 Protein Homology CDS 4303710 4304564 . + 0 ID=cds4283;Parent=gene4343;Dbxref=Genbank:WP_025246859.1;Name=WP_025246859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246859.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4304821 4305740 . + . ID=gene4344;Name=SOPEG_RS21325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21325;pseudo=true NZ_CP006568.1 Protein Homology CDS 4304821 4305740 . + 0 ID=cds4284;Parent=gene4344;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4305737 4305940 . + . ID=gene4345;Name=SOPEG_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21330 NZ_CP006568.1 Protein Homology CDS 4305737 4305940 . + 0 ID=cds4285;Parent=gene4345;Dbxref=Genbank:WP_025246860.1;Name=WP_025246860.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246860.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4305998 4307839 . + . ID=gene4346;Name=SOPEG_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21335 NZ_CP006568.1 Protein Homology CDS 4305998 4307839 . + 0 ID=cds4286;Parent=gene4346;Dbxref=Genbank:WP_051419963.1;Name=WP_051419963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419963.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4307833 4308372 . + . ID=gene4347;Name=SOPEG_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23590 NZ_CP006568.1 Protein Homology CDS 4307833 4308372 . + 0 ID=cds4287;Parent=gene4347;Dbxref=Genbank:WP_051419964.1;Name=WP_051419964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419964.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4308432 4309232 . + . ID=gene4348;Name=SOPEG_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21340;old_locus_tag=SOPEG_3971 NZ_CP006568.1 Protein Homology CDS 4308432 4309232 . + 0 ID=cds4288;Parent=gene4348;Dbxref=Genbank:WP_025246861.1;Name=WP_025246861.1;gbkey=CDS;product=conjugal transfer protein TraB;protein_id=WP_025246861.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4309463 4309792 . + . ID=gene4349;Name=SOPEG_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21345 NZ_CP006568.1 Protein Homology CDS 4309463 4309792 . + 0 ID=cds4289;Parent=gene4349;Dbxref=Genbank:WP_038469189.1;Name=WP_038469189.1;gbkey=CDS;product=cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK;protein_id=WP_038469189.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4310173 4311861 . + . ID=gene4350;Name=SOPEG_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21350;old_locus_tag=SOPEG_3973 NZ_CP006568.1 Protein Homology CDS 4310173 4311861 . + 0 ID=cds4290;Parent=gene4350;Dbxref=Genbank:WP_025246862.1;Name=WP_025246862.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_025246862.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4311987 4312952 . - . ID=gene4351;Name=SOPEG_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21355;old_locus_tag=SOPEG_3974 NZ_CP006568.1 Protein Homology CDS 4311987 4312952 . - 0 ID=cds4291;Parent=gene4351;Dbxref=Genbank:WP_025246863.1;Name=WP_025246863.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_025246863.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4313294 4313521 . - . ID=gene4352;Name=SOPEG_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21360 NZ_CP006568.1 GeneMarkS+ CDS 4313294 4313521 . - 0 ID=cds4292;Parent=gene4352;Dbxref=Genbank:WP_038469193.1;Name=WP_038469193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469193.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4313582 4314226 . - . ID=gene4353;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SOPEG_RS21365;old_locus_tag=SOPEG_3975 NZ_CP006568.1 Protein Homology CDS 4313582 4314226 . - 0 ID=cds4293;Parent=gene4353;Dbxref=Genbank:WP_025246864.1;Name=WP_025246864.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_025246864.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4314594 4316501 . - . ID=gene4354;Name=SOPEG_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21370;old_locus_tag=SOPEG_3976 NZ_CP006568.1 Protein Homology CDS 4314594 4316501 . - 0 ID=cds4294;Parent=gene4354;Dbxref=Genbank:WP_025246865.1;Name=WP_025246865.1;Note=molecular chaperone;gbkey=CDS;product=heat-shock protein Hsp90;protein_id=WP_025246865.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4316638 4317204 . - . ID=gene4355;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SOPEG_RS21375;old_locus_tag=SOPEG_3977 NZ_CP006568.1 Protein Homology CDS 4316638 4317204 . - 0 ID=cds4295;Parent=gene4355;Dbxref=Genbank:WP_025246866.1;Name=WP_025246866.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_025246866.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4317204 4317533 . - . ID=gene4356;Name=SOPEG_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21380;old_locus_tag=SOPEG_3978 NZ_CP006568.1 Protein Homology CDS 4317204 4317533 . - 0 ID=cds4296;Parent=gene4356;Dbxref=Genbank:WP_025246867.1;Name=WP_025246867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246867.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4317593 4320001 . - . ID=gene4357;Name=SOPEG_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21385;old_locus_tag=SOPEG_3979 NZ_CP006568.1 Protein Homology CDS 4317593 4320001 . - 0 ID=cds4297;Parent=gene4357;Dbxref=Genbank:WP_025246868.1;Name=WP_025246868.1;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_025246868.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4320076 4320627 . - . ID=gene4358;Name=SOPEG_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21390;old_locus_tag=SOPEG_3980 NZ_CP006568.1 Protein Homology CDS 4320076 4320627 . - 0 ID=cds4298;Parent=gene4358;Dbxref=Genbank:WP_025246869.1;Name=WP_025246869.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_025246869.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4320887 4321417 . + . ID=gene4359;Name=SOPEG_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21395;old_locus_tag=SOPEG_3981 NZ_CP006568.1 Protein Homology CDS 4320887 4321417 . + 0 ID=cds4299;Parent=gene4359;Dbxref=Genbank:WP_025246870.1;Name=WP_025246870.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_025246870.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4321705 4322364 . - . ID=gene4360;Name=SOPEG_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21400;old_locus_tag=SOPEG_3983 NZ_CP006568.1 Protein Homology CDS 4321705 4322364 . - 0 ID=cds4300;Parent=gene4360;Dbxref=Genbank:WP_025246871.1;Name=WP_025246871.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4322509 4323705 . + . ID=gene4361;Name=SOPEG_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21405;old_locus_tag=SOPEG_3984 NZ_CP006568.1 Protein Homology CDS 4322509 4323705 . + 0 ID=cds4301;Parent=gene4361;Dbxref=Genbank:WP_025246872.1;Name=WP_025246872.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_025246872.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4323724 4326888 . + . ID=gene4362;Name=SOPEG_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21410;old_locus_tag=SOPEG_3985 NZ_CP006568.1 Protein Homology CDS 4323724 4326888 . + 0 ID=cds4302;Parent=gene4362;Dbxref=Genbank:WP_025246873.1;Name=WP_025246873.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_025246873.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4327040 4327297 . + . ID=gene4363;Name=SOPEG_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21415;old_locus_tag=SOPEG_3986 NZ_CP006568.1 Protein Homology CDS 4327040 4327297 . + 0 ID=cds4303;Parent=gene4363;Dbxref=Genbank:WP_025246874.1;Name=WP_025246874.1;gbkey=CDS;product=50S ribosomal protein L31;protein_id=WP_025246874.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4327980 4328339 . + . ID=gene4364;Name=SOPEG_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21420;old_locus_tag=SOPEG_3988 NZ_CP006568.1 Protein Homology CDS 4327980 4328339 . + 0 ID=cds4304;Parent=gene4364;Dbxref=Genbank:WP_025246875.1;Name=WP_025246875.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246875.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4328386 4328589 . + . ID=gene4365;Name=SOPEG_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21425;old_locus_tag=SOPEG_3989 NZ_CP006568.1 Protein Homology CDS 4328386 4328589 . + 0 ID=cds4305;Parent=gene4365;Dbxref=Genbank:WP_011410544.1;Name=WP_011410544.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=transcriptional regulator;protein_id=WP_011410544.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4329383 4329712 . + . ID=gene4366;Name=SOPEG_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21430 NZ_CP006568.1 Protein Homology CDS 4329383 4329712 . + 0 ID=cds4306;Parent=gene4366;Dbxref=Genbank:WP_025246876.1;Name=WP_025246876.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246876.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4330033 4330593 . - . ID=gene4367;Name=SOPEG_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21435 NZ_CP006568.1 Protein Homology CDS 4330033 4330593 . - 0 ID=cds4307;Parent=gene4367;Dbxref=Genbank:WP_025246877.1;Name=WP_025246877.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246877.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4330578 4333875 . + . ID=id633;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4330616 4331185 . - . ID=gene4368;Name=SOPEG_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21440 NZ_CP006568.1 Protein Homology CDS 4330616 4331185 . - 0 ID=cds4308;Parent=gene4368;Dbxref=Genbank:WP_025246878.1;Name=WP_025246878.1;gbkey=CDS;product=transposase;protein_id=WP_025246878.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4331285 4331563 . + . ID=gene4369;Name=SOPEG_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21445 NZ_CP006568.1 Protein Homology CDS 4331285 4331563 . + 0 ID=cds4309;Parent=gene4369;Dbxref=Genbank:WP_025246879.1;Name=WP_025246879.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246879.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4331509 4332492 . + . ID=gene4370;Name=SOPEG_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21450 NZ_CP006568.1 Protein Homology CDS 4331509 4332492 . + 0 ID=cds4310;Parent=gene4370;Dbxref=Genbank:WP_038469199.1;Name=WP_038469199.1;gbkey=CDS;product=transposase;protein_id=WP_038469199.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4332761 4333147 . - . ID=gene4371;Name=SOPEG_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21455 NZ_CP006568.1 Protein Homology CDS 4332761 4333147 . - 0 ID=cds4311;Parent=gene4371;Dbxref=Genbank:WP_051419965.1;Name=WP_051419965.1;gbkey=CDS;product=transposase;protein_id=WP_051419965.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4334054 4335283 . - . ID=gene4372;Name=SOPEG_RS21465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21465;pseudo=true NZ_CP006568.1 Protein Homology CDS 4334054 4335283 . - 0 ID=cds4312;Parent=gene4372;gbkey=CDS;product=ammonium transporter;pseudo=true;transl_except=(pos:complement(4334189..4334191)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4335320 4335663 . - . ID=gene4373;Name=SOPEG_RS21470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21470;pseudo=true NZ_CP006568.1 Protein Homology CDS 4335320 4335663 . - 0 ID=cds4313;Parent=gene4373;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4336056 4337831 . - . ID=gene4374;Name=SOPEG_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21475;old_locus_tag=SOPEG_3997 NZ_CP006568.1 Protein Homology CDS 4336056 4337831 . - 0 ID=cds4314;Parent=gene4374;Dbxref=Genbank:WP_025246882.1;Name=WP_025246882.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_025246882.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4337815 4339587 . - . ID=gene4375;Name=SOPEG_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21480;old_locus_tag=SOPEG_3998 NZ_CP006568.1 Protein Homology CDS 4337815 4339587 . - 0 ID=cds4315;Parent=gene4375;Dbxref=Genbank:WP_025246883.1;Name=WP_025246883.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_025246883.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4340125 4341153 . + . ID=gene4376;Name=SOPEG_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21485;old_locus_tag=SOPEG_3999 NZ_CP006568.1 Protein Homology CDS 4340125 4341153 . + 0 ID=cds4316;Parent=gene4376;Dbxref=Genbank:WP_025246884.1;Name=WP_025246884.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_025246884.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4341251 4341946 . + . ID=gene4377;Name=SOPEG_RS21490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21490;pseudo=true NZ_CP006568.1 Protein Homology CDS 4341251 4341946 . + 0 ID=cds4317;Parent=gene4377;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=queuosine biosynthesis protein QueC;pseudo=true;transl_except=(pos:4341308..4341310%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4342351 4342530 . - . ID=gene4378;Name=SOPEG_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21495 NZ_CP006568.1 GeneMarkS+ CDS 4342351 4342530 . - 0 ID=cds4318;Parent=gene4378;Dbxref=Genbank:WP_038469205.1;Name=WP_038469205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469205.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4342527 4342916 . - . ID=gene4379;Name=SOPEG_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21500 NZ_CP006568.1 GeneMarkS+ CDS 4342527 4342916 . - 0 ID=cds4319;Parent=gene4379;Dbxref=Genbank:WP_025246885.1;Name=WP_025246885.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246885.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4343061 4344947 . - . ID=gene4380;Name=SOPEG_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21505;old_locus_tag=SOPEG_4002 NZ_CP006568.1 Protein Homology CDS 4343061 4344947 . - 0 ID=cds4320;Parent=gene4380;Dbxref=Genbank:WP_025246886.1;Name=WP_025246886.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_025246886.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4344971 4345159 . + . ID=gene4381;Name=SOPEG_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21510 NZ_CP006568.1 GeneMarkS+ CDS 4344971 4345159 . + 0 ID=cds4321;Parent=gene4381;Dbxref=Genbank:WP_025246887.1;Name=WP_025246887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246887.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4345183 4345455 . - . ID=gene4382;Name=SOPEG_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21515;old_locus_tag=SOPEG_4003 NZ_CP006568.1 Protein Homology CDS 4345183 4345455 . - 0 ID=cds4322;Parent=gene4382;Dbxref=Genbank:WP_025246888.1;Name=WP_025246888.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator HU subunit alpha;protein_id=WP_025246888.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4345667 4348027 . - . ID=gene4383;Name=SOPEG_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21520;old_locus_tag=SOPEG_4004 NZ_CP006568.1 Protein Homology CDS 4345667 4348027 . - 0 ID=cds4323;Parent=gene4383;Dbxref=Genbank:WP_025246889.1;Name=WP_025246889.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_025246889.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4348222 4349496 . - . ID=gene4384;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SOPEG_RS21525;old_locus_tag=SOPEG_4005 NZ_CP006568.1 Protein Homology CDS 4348222 4349496 . - 0 ID=cds4324;Parent=gene4384;Dbxref=Genbank:WP_025246890.1;Name=WP_025246890.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_025246890.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4349644 4350267 . - . ID=gene4385;Name=SOPEG_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21530;old_locus_tag=SOPEG_4006 NZ_CP006568.1 Protein Homology CDS 4349644 4350267 . - 0 ID=cds4325;Parent=gene4385;Dbxref=Genbank:WP_025246891.1;Name=WP_025246891.1;gbkey=CDS;product=Clp protease ClpP;protein_id=WP_025246891.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4350665 4351969 . - . ID=gene4386;Name=SOPEG_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21535;old_locus_tag=SOPEG_4007 NZ_CP006568.1 Protein Homology CDS 4350665 4351969 . - 0 ID=cds4326;Parent=gene4386;Dbxref=Genbank:WP_025246892.1;Name=WP_025246892.1;gbkey=CDS;product=trigger factor;protein_id=WP_025246892.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4352289 4352606 . - . ID=gene4387;Name=SOPEG_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21540;old_locus_tag=SOPEG_4008 NZ_CP006568.1 Protein Homology CDS 4352289 4352606 . - 0 ID=cds4327;Parent=gene4387;Dbxref=Genbank:WP_025246893.1;Name=WP_025246893.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_025246893.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4352896 4353474 . + . ID=gene4388;Name=SOPEG_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21545;old_locus_tag=SOPEG_4009 NZ_CP006568.1 Protein Homology CDS 4352896 4353474 . + 0 ID=cds4328;Parent=gene4388;Dbxref=Genbank:WP_025246894.1;Name=WP_025246894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246894.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4353538 4354844 . + . ID=gene4389;Name=ampG;end_range=4354844,.;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=SOPEG_RS21550;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4353538 4354844 . + 0 ID=cds4329;Parent=gene4389;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;end_range=4354844,.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ampG;partial=true;product=muropeptide transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4354845 4356460 . + . ID=gene4390;Name=SOPEG_RS21555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21555;partial=true;pseudo=true;start_range=.,4354845 NZ_CP006568.1 Protein Homology CDS 4354845 4356460 . + 0 ID=cds4330;Parent=gene4390;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=cytochrome o ubiquinol oxidase subunit I;pseudo=true;start_range=.,4354845;transl_except=(pos:4355814..4355816%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4356450 4357064 . + . ID=gene4391;Name=SOPEG_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21560;old_locus_tag=SOPEG_4012 NZ_CP006568.1 Protein Homology CDS 4356450 4357064 . + 0 ID=cds4331;Parent=gene4391;Dbxref=Genbank:WP_025246895.1;Name=WP_025246895.1;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_025246895.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4357064 4357396 . + . ID=gene4392;Name=SOPEG_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21565;old_locus_tag=SOPEG_4013 NZ_CP006568.1 Protein Homology CDS 4357064 4357396 . + 0 ID=cds4332;Parent=gene4392;Dbxref=Genbank:WP_025246896.1;Name=WP_025246896.1;gbkey=CDS;product=cytochrome C oxidase;protein_id=WP_025246896.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4357412 4358302 . + . ID=gene4393;Name=SOPEG_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21570;old_locus_tag=SOPEG_4014 NZ_CP006568.1 Protein Homology CDS 4357412 4358302 . + 0 ID=cds4333;Parent=gene4393;Dbxref=Genbank:WP_025246897.1;Name=WP_025246897.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_025246897.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4358528 4359802 . + . ID=gene4394;Name=SOPEG_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21575;old_locus_tag=SOPEG_4015 NZ_CP006568.1 Protein Homology CDS 4358528 4359802 . + 0 ID=cds4334;Parent=gene4394;Dbxref=Genbank:WP_025246898.1;Name=WP_025246898.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246898.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4360007 4360498 . - . ID=gene4395;Name=SOPEG_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21580;old_locus_tag=SOPEG_4016 NZ_CP006568.1 Protein Homology CDS 4360007 4360498 . - 0 ID=cds4335;Parent=gene4395;Dbxref=Genbank:WP_025246899.1;Name=WP_025246899.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_025246899.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4360690 4361593 . + . ID=gene4396;Name=SOPEG_RS21585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21585;pseudo=true NZ_CP006568.1 Protein Homology CDS 4360690 4361593 . + 0 ID=cds4336;Parent=gene4396;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=2-dehydropantoate 2-reductase;pseudo=true;transl_except=(pos:4361005..4361007%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4361556 4362132 . + . ID=gene4397;Name=SOPEG_RS21590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21590;pseudo=true NZ_CP006568.1 Protein Homology CDS 4361556 4362132 . + 0 ID=cds4337;Parent=gene4397;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidative-stress-resistance chaperone;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4362280 4363731 . - . ID=gene4398;Name=SOPEG_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21595;old_locus_tag=SOPEG_4019 NZ_CP006568.1 Protein Homology CDS 4362280 4363731 . - 0 ID=cds4338;Parent=gene4398;Dbxref=Genbank:WP_025246900.1;Name=WP_025246900.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA s(4)U8 sulfurtransferase;protein_id=WP_025246900.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4363951 4364199 . + . ID=gene4399;Name=SOPEG_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21600;old_locus_tag=SOPEG_4020 NZ_CP006568.1 Protein Homology CDS 4363951 4364199 . + 0 ID=cds4339;Parent=gene4399;Dbxref=Genbank:WP_025246901.1;Name=WP_025246901.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease VII small subunit;protein_id=WP_025246901.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4364196 4365098 . + . ID=gene4400;Name=SOPEG_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21605;old_locus_tag=SOPEG_4021 NZ_CP006568.1 Protein Homology CDS 4364196 4365098 . + 0 ID=cds4340;Parent=gene4400;Dbxref=Genbank:WP_025246902.1;Name=WP_025246902.1;gbkey=CDS;product=geranyl transferase;protein_id=WP_025246902.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4365136 4366998 . + . ID=gene4401;Name=SOPEG_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21610;old_locus_tag=SOPEG_4022 NZ_CP006568.1 Protein Homology CDS 4365136 4366998 . + 0 ID=cds4341;Parent=gene4401;Dbxref=Genbank:WP_025246903.1;Name=WP_025246903.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_025246903.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4367023 4367214 . - . ID=gene4402;Name=SOPEG_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21615 NZ_CP006568.1 GeneMarkS+ CDS 4367023 4367214 . - 0 ID=cds4342;Parent=gene4402;Dbxref=Genbank:WP_025246904.1;Name=WP_025246904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246904.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4367319 4368291 . + . ID=gene4403;Name=SOPEG_RS21620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21620;pseudo=true NZ_CP006568.1 Protein Homology CDS 4367319 4368291 . + 0 ID=cds4343;Parent=gene4403;exception=annotated by transcript or proteomic data;gbkey=CDS;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4368335 4368823 . - . ID=gene4404;Name=SOPEG_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21625;old_locus_tag=SOPEG_4024 NZ_CP006568.1 Protein Homology CDS 4368335 4368823 . - 0 ID=cds4344;Parent=gene4404;Dbxref=Genbank:WP_038470679.1;Name=WP_038470679.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase;protein_id=WP_038470679.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4368832 4369818 . - . ID=gene4405;Name=SOPEG_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21630;old_locus_tag=SOPEG_4025 NZ_CP006568.1 Protein Homology CDS 4368832 4369818 . - 0 ID=cds4345;Parent=gene4405;Dbxref=Genbank:WP_025246906.1;Name=WP_025246906.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_025246906.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4369888 4370307 . - . ID=gene4406;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SOPEG_RS21635;old_locus_tag=SOPEG_4026 NZ_CP006568.1 Protein Homology CDS 4369888 4370307 . - 0 ID=cds4346;Parent=gene4406;Dbxref=Genbank:WP_025246907.1;Name=WP_025246907.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antiterminator NusB;protein_id=WP_025246907.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4370328 4370798 . - . ID=gene4407;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SOPEG_RS21640;old_locus_tag=SOPEG_4027 NZ_CP006568.1 Protein Homology CDS 4370328 4370798 . - 0 ID=cds4347;Parent=gene4407;Dbxref=Genbank:WP_025246908.1;Name=WP_025246908.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_025246908.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4370885 4372012 . - . ID=gene4408;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SOPEG_RS21645;old_locus_tag=SOPEG_4028 NZ_CP006568.1 Protein Homology CDS 4370885 4372012 . - 0 ID=cds4348;Parent=gene4408;Dbxref=Genbank:WP_025246909.1;Name=WP_025246909.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_025246909.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4372035 4372482 . - . ID=gene4409;Name=SOPEG_RS21650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21650;pseudo=true NZ_CP006568.1 Protein Homology CDS 4372035 4372482 . - 0 ID=cds4349;Parent=gene4409;exception=annotated by transcript or proteomic data;gbkey=CDS;product=NrdR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4372676 4373175 . + . ID=gene4410;Name=SOPEG_RS21655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21655;pseudo=true NZ_CP006568.1 Protein Homology CDS 4372676 4373175 . + 0 ID=cds4350;Parent=gene4410;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4372820..4372822%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4373172 4373438 . + . ID=gene4411;Name=SOPEG_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21660 NZ_CP006568.1 GeneMarkS+ CDS 4373172 4373438 . + 0 ID=cds4351;Parent=gene4411;Dbxref=Genbank:WP_025246911.1;Name=WP_025246911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246911.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4373219 4373405 . + . ID=id634;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 4373775 4375099 . + . ID=id635;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4373851 4375059 . + . ID=gene4412;Name=SOPEG_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21665;old_locus_tag=SOPEG_4031 NZ_CP006568.1 Protein Homology CDS 4373851 4375059 . + 0 ID=cds4352;Parent=gene4412;Dbxref=Genbank:WP_025246912.1;Name=WP_025246912.1;gbkey=CDS;product=transposase;protein_id=WP_025246912.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4375082 4375360 . + . ID=gene4413;Name=SOPEG_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21670 NZ_CP006568.1 GeneMarkS+ CDS 4375082 4375360 . + 0 ID=cds4353;Parent=gene4413;Dbxref=Genbank:WP_025246913.1;Name=WP_025246913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246913.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4375475 4377004 . + . ID=gene4414;Name=SOPEG_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21675;old_locus_tag=SOPEG_4033 NZ_CP006568.1 Protein Homology CDS 4375475 4377004 . + 0 ID=cds4354;Parent=gene4414;Dbxref=Genbank:WP_025246914.1;Name=WP_025246914.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_025246914.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4377059 4377394 . - . ID=gene4415;Name=SOPEG_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21680;old_locus_tag=SOPEG_4034 NZ_CP006568.1 Protein Homology CDS 4377059 4377394 . - 0 ID=cds4355;Parent=gene4415;Dbxref=Genbank:WP_025246915.1;Name=WP_025246915.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein UspB;protein_id=WP_025246915.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4377840 4378301 . + . ID=gene4416;Name=SOPEG_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21685;old_locus_tag=SOPEG_4035 NZ_CP006568.1 Protein Homology CDS 4377840 4378301 . + 0 ID=cds4356;Parent=gene4416;Dbxref=Genbank:WP_025246916.1;Name=WP_025246916.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246916.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4378511 4378807 . - . ID=gene4417;Name=SOPEG_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21690 NZ_CP006568.1 GeneMarkS+ CDS 4378511 4378807 . - 0 ID=cds4357;Parent=gene4417;Dbxref=Genbank:WP_025246917.1;Name=WP_025246917.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246917.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4378911 4380232 . + . ID=id636;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4378949 4379290 . - . ID=gene4418;Name=SOPEG_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21695 NZ_CP006568.1 Protein Homology CDS 4378949 4379290 . - 0 ID=cds4358;Parent=gene4418;Dbxref=Genbank:WP_025246918.1;Name=WP_025246918.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246918.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4379357 4379851 . - . ID=gene4419;Name=SOPEG_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23595 NZ_CP006568.1 Protein Homology CDS 4379357 4379851 . - 0 ID=cds4359;Parent=gene4419;Dbxref=Genbank:WP_051419966.1;Name=WP_051419966.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419966.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4379867 4380157 . - . ID=gene4420;Name=SOPEG_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21700 NZ_CP006568.1 Protein Homology CDS 4379867 4380157 . - 0 ID=cds4360;Parent=gene4420;Dbxref=Genbank:WP_051419967.1;Name=WP_051419967.1;gbkey=CDS;product=transposase;protein_id=WP_051419967.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4380334 4381166 . + . ID=gene4421;Name=SOPEG_RS21705;end_range=4381166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21705;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4380334 4381166 . + 0 ID=cds4361;Parent=gene4421;end_range=4381166,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4381375 4382546 . + . ID=gene4422;Name=SOPEG_RS21710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21710;pseudo=true NZ_CP006568.1 Protein Homology CDS 4381375 4382546 . + 0 ID=cds4362;Parent=gene4422;Note=Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen%2C nitrate%2C sulphate or fumarate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=formate dehydrogenase;pseudo=true;transl_except=(pos:4381495..4381497%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4382664 4383260 . - . ID=gene4423;Name=SOPEG_RS21715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21715;pseudo=true NZ_CP006568.1 Protein Homology CDS 4382664 4383260 . - 0 ID=cds4363;Parent=gene4423;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=methyltransferase;pseudo=true;transl_except=(pos:complement(4383168..4383170)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4383266 4385308 . - . ID=gene4424;Name=SOPEG_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21720;old_locus_tag=SOPEG_4040 NZ_CP006568.1 Protein Homology CDS 4383266 4385308 . - 0 ID=cds4364;Parent=gene4424;Dbxref=Genbank:WP_025246919.1;Name=WP_025246919.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_025246919.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4385594 4386016 . + . ID=gene4425;Name=SOPEG_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21725;old_locus_tag=SOPEG_4041 NZ_CP006568.1 Protein Homology CDS 4385594 4386016 . + 0 ID=cds4365;Parent=gene4425;Dbxref=Genbank:WP_025246920.1;Name=WP_025246920.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_025246920.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4386264 4387313 . - . ID=gene4426;Name=SOPEG_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21730;old_locus_tag=SOPEG_4042 NZ_CP006568.1 Protein Homology CDS 4386264 4387313 . - 0 ID=cds4366;Parent=gene4426;Dbxref=Genbank:WP_025246921.1;Name=WP_025246921.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_025246921.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4387489 4388163 . + . ID=gene4427;Name=SOPEG_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21735;old_locus_tag=SOPEG_4043 NZ_CP006568.1 Protein Homology CDS 4387489 4388163 . + 0 ID=cds4367;Parent=gene4427;Dbxref=Genbank:WP_025246922.1;Name=WP_025246922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246922.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4388303 4389616 . - . ID=gene4428;Name=SOPEG_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21740;old_locus_tag=SOPEG_4044 NZ_CP006568.1 Protein Homology CDS 4388303 4389616 . - 0 ID=cds4368;Parent=gene4428;Dbxref=Genbank:WP_051419968.1;Name=WP_051419968.1;gbkey=CDS;product=allantoin permease;protein_id=WP_051419968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4390522 4391343 . + . ID=gene4429;Name=SOPEG_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21745;old_locus_tag=SOPEG_4045 NZ_CP006568.1 Protein Homology CDS 4390522 4391343 . + 0 ID=cds4369;Parent=gene4429;Dbxref=Genbank:WP_025246925.1;Name=WP_025246925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246925.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4391441 4392793 . + . ID=gene4430;Name=SOPEG_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21750;old_locus_tag=SOPEG_4046 NZ_CP006568.1 Protein Homology CDS 4391441 4392793 . + 0 ID=cds4370;Parent=gene4430;Dbxref=Genbank:WP_025246926.1;Name=WP_025246926.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_025246926.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4393020 4393334 . + . ID=gene4431;Name=SOPEG_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23600 NZ_CP006568.1 Protein Homology CDS 4393020 4393334 . + 0 ID=cds4371;Parent=gene4431;Dbxref=Genbank:WP_051419969.1;Name=WP_051419969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419969.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4393331 4393834 . + . ID=gene4432;Name=SOPEG_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23605 NZ_CP006568.1 Protein Homology CDS 4393331 4393834 . + 0 ID=cds4372;Parent=gene4432;Dbxref=Genbank:WP_051419970.1;Name=WP_051419970.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419970.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4394271 4395520 . + . ID=gene4433;Name=SOPEG_RS21760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21760;pseudo=true NZ_CP006568.1 Protein Homology CDS 4394271 4395520 . + 0 ID=cds4373;Parent=gene4433;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4395631 4396406 . + . ID=gene4434;Name=SOPEG_RS21765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21765;pseudo=true NZ_CP006568.1 Protein Homology CDS 4395631 4396406 . + 0 ID=cds4374;Parent=gene4434;exception=annotated by transcript or proteomic data;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4396461 4398431 . - . ID=gene4435;Name=SOPEG_RS21770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21770;pseudo=true NZ_CP006568.1 Protein Homology CDS 4396461 4398431 . - 0 ID=cds4375;Parent=gene4435;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4398888 4399813 . + . ID=gene4436;Name=SOPEG_RS21775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21775;pseudo=true NZ_CP006568.1 Protein Homology CDS 4398888 4399813 . + 0 ID=cds4376;Parent=gene4436;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ketodeoxygluconokinase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4400153 4400977 . - . ID=gene4437;Name=SOPEG_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21780 NZ_CP006568.1 Protein Homology CDS 4400153 4400977 . - 0 ID=cds4377;Parent=gene4437;Dbxref=Genbank:WP_051419971.1;Name=WP_051419971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419971.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4400993 4406531 . + . ID=id637;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4401420 4402133 . - . ID=gene4438;Name=SOPEG_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21785 NZ_CP006568.1 Protein Homology CDS 4401420 4402133 . - 0 ID=cds4378;Parent=gene4438;Dbxref=Genbank:WP_038469212.1;Name=WP_038469212.1;gbkey=CDS;product=transposase;protein_id=WP_038469212.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4402190 4403398 . + . ID=gene4439;Name=SOPEG_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21790;old_locus_tag=SOPEG_4054 NZ_CP006568.1 Protein Homology CDS 4402190 4403398 . + 0 ID=cds4379;Parent=gene4439;Dbxref=Genbank:WP_025246930.1;Name=WP_025246930.1;gbkey=CDS;product=transposase;protein_id=WP_025246930.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4403517 4404269 . - . ID=gene4440;Name=SOPEG_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21795;old_locus_tag=SOPEG_4055 NZ_CP006568.1 Protein Homology CDS 4403517 4404269 . - 0 ID=cds4380;Parent=gene4440;Dbxref=Genbank:WP_025246931.1;Name=WP_025246931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246931.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4404281 4405798 . - . ID=gene4441;Name=SOPEG_RS21800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21800;pseudo=true NZ_CP006568.1 Protein Homology CDS 4404281 4405798 . - 0 ID=cds4381;Parent=gene4441;gbkey=CDS;product=transposase;pseudo=true;transl_except=(pos:complement(4405271..4405273)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4406006 4406464 . - . ID=gene4442;Name=SOPEG_RS21805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21805;partial=true;pseudo=true;start_range=.,4406006 NZ_CP006568.1 Protein Homology CDS 4406006 4406464 . - 0 ID=cds4382;Parent=gene4442;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,4406006;transl_table=11 NZ_CP006568.1 RefSeq gene 4407262 4409228 . - . ID=gene4443;Name=SOPEG_RS21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21810;old_locus_tag=SOPEG_4057;pseudo=true NZ_CP006568.1 Protein Homology CDS 4407262 4409228 . - 0 ID=cds4383;Parent=gene4443;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=biofilm formation regulator HmsP;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4410206 4410556 . + . ID=gene4444;Name=SOPEG_RS21815;end_range=4410556,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21815;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4410206 4410556 . + 0 ID=cds4384;Parent=gene4444;end_range=4410556,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=chromosome partitioning protein ParA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4410553 4414190 . + . ID=id638;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4410623 4410950 . + . ID=gene4445;Name=SOPEG_RS21820;end_range=4410950,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21820;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4410623 4410950 . + 0 ID=cds4385;Parent=gene4445;end_range=4410950,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4411098 4411844 . + . ID=gene4446;Name=SOPEG_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21825 NZ_CP006568.1 Protein Homology CDS 4411098 4411844 . + 0 ID=cds4386;Parent=gene4446;Dbxref=Genbank:WP_038470690.1;Name=WP_038470690.1;gbkey=CDS;product=transposase;protein_id=WP_038470690.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4412325 4413248 . - . ID=gene4447;Name=SOPEG_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21830;old_locus_tag=SOPEG_4060 NZ_CP006568.1 Protein Homology CDS 4412325 4413248 . - 0 ID=cds4387;Parent=gene4447;Dbxref=Genbank:WP_025243983.1;Name=WP_025243983.1;gbkey=CDS;product=transposase;protein_id=WP_025243983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4413368 4414132 . + . ID=gene4448;Name=SOPEG_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21835 NZ_CP006568.1 Protein Homology CDS 4413368 4414132 . + 0 ID=cds4388;Parent=gene4448;Dbxref=Genbank:WP_051419972.1;Name=WP_051419972.1;gbkey=CDS;product=transposase;protein_id=WP_051419972.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4414198 4414660 . + . ID=gene4449;Name=SOPEG_RS21840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21840;partial=true;pseudo=true;start_range=.,4414198 NZ_CP006568.1 Protein Homology CDS 4414198 4414660 . + 0 ID=cds4389;Parent=gene4449;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=chromosome partitioning protein ParA;pseudo=true;start_range=.,4414198;transl_table=11 NZ_CP006568.1 RefSeq gene 4414680 4416779 . + . ID=gene4450;Name=SOPEG_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21845;old_locus_tag=SOPEG_4062 NZ_CP006568.1 Protein Homology CDS 4414680 4416779 . + 0 ID=cds4390;Parent=gene4450;Dbxref=Genbank:WP_051419973.1;Name=WP_051419973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419973.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4415117 4416806 . + . ID=id639;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4416800 4418524 . + . ID=gene4451;Name=SOPEG_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21850 NZ_CP006568.1 Protein Homology CDS 4416800 4418524 . + 0 ID=cds4391;Parent=gene4451;Dbxref=Genbank:WP_051419974.1;Name=WP_051419974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419974.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4416828 4418212 . + . ID=id640;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 4418226 4419610 . + . ID=id641;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4418562 4421738 . + . ID=gene4452;Name=SOPEG_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21855 NZ_CP006568.1 Protein Homology CDS 4418562 4421738 . + 0 ID=cds4392;Parent=gene4452;Dbxref=Genbank:WP_025246934.1;Name=WP_025246934.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246934.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4419742 4425366 . + . ID=id642;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4421819 4422166 . + . ID=gene4453;Name=SOPEG_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21860 NZ_CP006568.1 Protein Homology CDS 4421819 4422166 . + 0 ID=cds4393;Parent=gene4453;Dbxref=Genbank:WP_051419975.1;Name=WP_051419975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419975.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4422195 4423202 . + . ID=gene4454;Name=SOPEG_RS21865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21865;pseudo=true NZ_CP006568.1 Protein Homology CDS 4422195 4423202 . + 0 ID=cds4394;Parent=gene4454;gbkey=CDS;product=endoglucanase;pseudo=true;transl_except=(pos:4422423..4422425%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4423358 4423627 . - . ID=gene4455;Name=narI;end_range=4423627,.;gbkey=Gene;gene=narI;gene_biotype=pseudogene;locus_tag=SOPEG_RS21870;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4423358 4423627 . - 0 ID=cds4395;Parent=gene4455;Note=with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;end_range=4423627,.;exception=unextendable partial coding region;gbkey=CDS;gene=narI;partial=true;product=nitrate reductase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4423965 4424072 . + . ID=gene4456;Name=SOPEG_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23610 NZ_CP006568.1 Protein Homology CDS 4423965 4424072 . + 0 ID=cds4396;Parent=gene4456;Dbxref=Genbank:WP_051419976.1;Name=WP_051419976.1;gbkey=CDS;product=transposase;protein_id=WP_051419976.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4424091 4425173 . + . ID=gene4457;Name=SOPEG_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23615;old_locus_tag=SOPEG_ps4068 NZ_CP006568.1 Protein Homology CDS 4424091 4425173 . + 0 ID=cds4397;Parent=gene4457;Dbxref=Genbank:WP_051419977.1;Name=WP_051419977.1;gbkey=CDS;product=transposase;protein_id=WP_051419977.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4426213 4427183 . + . ID=id643;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4426295 4426618 . + . ID=gene4458;Name=SOPEG_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21880 NZ_CP006568.1 Protein Homology CDS 4426295 4426618 . + 0 ID=cds4398;Parent=gene4458;Dbxref=Genbank:WP_025246935.1;Name=WP_025246935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4426981 4427124 . + . ID=gene4459;Name=SOPEG_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21885 NZ_CP006568.1 Protein Homology CDS 4426981 4427124 . + 0 ID=cds4399;Parent=gene4459;Dbxref=Genbank:WP_038469217.1;Name=WP_038469217.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469217.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4427319 4427681 . + . ID=gene4460;Name=SOPEG_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23620 NZ_CP006568.1 Protein Homology CDS 4427319 4427681 . + 0 ID=cds4400;Parent=gene4460;Dbxref=Genbank:WP_025246936.1;Name=WP_025246936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246936.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4427730 4428278 . + . ID=gene4461;Name=SOPEG_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23625 NZ_CP006568.1 Protein Homology CDS 4427730 4428278 . + 0 ID=cds4401;Parent=gene4461;Dbxref=Genbank:WP_025246937.1;Name=WP_025246937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246937.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4428430 4428822 . - . ID=gene4462;Name=SOPEG_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21895 NZ_CP006568.1 Protein Homology CDS 4428430 4428822 . - 0 ID=cds4402;Parent=gene4462;Dbxref=Genbank:WP_025246938.1;Name=WP_025246938.1;gbkey=CDS;product=transposase;protein_id=WP_025246938.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4428485 4428898 . + . ID=id644;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4429066 4429293 . + . ID=gene4463;Name=SOPEG_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21900 NZ_CP006568.1 GeneMarkS+ CDS 4429066 4429293 . + 0 ID=cds4403;Parent=gene4463;Dbxref=Genbank:WP_025246939.1;Name=WP_025246939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246939.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4429330 4430782 . + . ID=gene4464;Name=SOPEG_RS21905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21905;pseudo=true NZ_CP006568.1 Protein Homology CDS 4429330 4430782 . + 0 ID=cds4404;Parent=gene4464;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATP-dependent protease;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4430817 4431155 . - . ID=gene4465;Name=SOPEG_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21910;old_locus_tag=SOPEG_4073 NZ_CP006568.1 Protein Homology CDS 4430817 4431155 . - 0 ID=cds4405;Parent=gene4465;Dbxref=Genbank:WP_025246940.1;Name=WP_025246940.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246940.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4431276 4432100 . + . ID=gene4466;Name=SOPEG_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21915;old_locus_tag=SOPEG_4074 NZ_CP006568.1 Protein Homology CDS 4431276 4432100 . + 0 ID=cds4406;Parent=gene4466;Dbxref=Genbank:WP_025246941.1;Name=WP_025246941.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=HdfR family transcriptional regulator;protein_id=WP_025246941.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4432179 4433124 . - . ID=gene4467;Name=SOPEG_RS21920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21920;partial=true;pseudo=true;start_range=.,4432179 NZ_CP006568.1 Protein Homology CDS 4432179 4433124 . - 0 ID=cds4407;Parent=gene4467;Note=membrane component of a putative sugar ABC transporter system;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,4432179;transl_table=11 NZ_CP006568.1 RefSeq gene 4433124 4434077 . - . ID=gene4468;Name=SOPEG_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21925;old_locus_tag=SOPEG_4076 NZ_CP006568.1 Protein Homology CDS 4433124 4434077 . - 0 ID=cds4408;Parent=gene4468;Dbxref=Genbank:WP_051420017.1;Name=WP_051420017.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_051420017.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4434121 4435497 . - . ID=gene4469;Name=SOPEG_RS21930;end_range=4435497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21930;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4434121 4435497 . - 0 ID=cds4409;Parent=gene4469;end_range=4435497,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4435482 4441396 . + . ID=id645;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4435520 4435861 . - . ID=gene4470;Name=SOPEG_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23630 NZ_CP006568.1 Protein Homology CDS 4435520 4435861 . - 0 ID=cds4410;Parent=gene4470;Dbxref=Genbank:WP_025246946.1;Name=WP_025246946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246946.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4435807 4436727 . - . ID=gene4471;Name=SOPEG_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21935 NZ_CP006568.1 Protein Homology CDS 4435807 4436727 . - 0 ID=cds4411;Parent=gene4471;Dbxref=Genbank:WP_025246947.1;Name=WP_025246947.1;gbkey=CDS;product=transposase;protein_id=WP_025246947.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4436935 4437859 . - . ID=gene4472;Name=SOPEG_RS21940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21940;pseudo=true NZ_CP006568.1 Protein Homology CDS 4436935 4437859 . - 0 ID=cds4412;Parent=gene4472;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4438180 4439271 . + . ID=gene4473;Name=SOPEG_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21945 NZ_CP006568.1 Protein Homology CDS 4438180 4439271 . + 0 ID=cds4413;Parent=gene4473;Dbxref=Genbank:WP_025246948.1;Name=WP_025246948.1;gbkey=CDS;product=transposase;protein_id=WP_025246948.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4439208 4440683 . + . ID=gene4474;Name=SOPEG_RS21950;end_range=4440683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21950;old_locus_tag=SOPEG_4081;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4439208 4440683 . + 0 ID=cds4414;Parent=gene4474;end_range=4440683,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4440770 4441247 . + . ID=gene4475;Name=SOPEG_RS21955;end_range=4441247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21955;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4440770 4441247 . + 0 ID=cds4415;Parent=gene4475;end_range=4441247,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4441438 4442651 . + . ID=id646;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4441514 4442575 . + . ID=gene4476;Name=SOPEG_RS21960;end_range=4442575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21960;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4441514 4442575 . + 0 ID=cds4416;Parent=gene4476;end_range=4442575,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4442751 4447478 . + . ID=id647;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4442791 4443999 . - . ID=gene4477;Name=SOPEG_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21965;old_locus_tag=SOPEG_4084 NZ_CP006568.1 Protein Homology CDS 4442791 4443999 . - 0 ID=cds4417;Parent=gene4477;Dbxref=Genbank:WP_025246951.1;Name=WP_025246951.1;gbkey=CDS;product=transposase;protein_id=WP_025246951.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4444302 4445051 . - . ID=gene4478;Name=SOPEG_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21970;old_locus_tag=SOPEG_4086 NZ_CP006568.1 Protein Homology CDS 4444302 4445051 . - 0 ID=cds4418;Parent=gene4478;Dbxref=Genbank:WP_025245871.1;Name=WP_025245871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025245871.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4445063 4446580 . - . ID=gene4479;Name=SOPEG_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21975;old_locus_tag=SOPEG_4087 NZ_CP006568.1 Protein Homology CDS 4445063 4446580 . - 0 ID=cds4419;Parent=gene4479;Dbxref=Genbank:WP_025246952.1;Name=WP_025246952.1;gbkey=CDS;product=transposase;protein_id=WP_025246952.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4446830 4447441 . + . ID=gene4480;Name=SOPEG_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21980 NZ_CP006568.1 Protein Homology CDS 4446830 4447441 . + 0 ID=cds4420;Parent=gene4480;Dbxref=Genbank:WP_038469225.1;Name=WP_038469225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469225.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4447457 4448083 . + . ID=gene4481;Name=SOPEG_RS21985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS21985;partial=true;pseudo=true;start_range=.,4447457 NZ_CP006568.1 Protein Homology CDS 4447457 4448083 . + 0 ID=cds4421;Parent=gene4481;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glucarate transporter;pseudo=true;start_range=.,4447457;transl_table=11 NZ_CP006568.1 RefSeq gene 4448287 4448703 . - . ID=gene4482;Name=SOPEG_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21990 NZ_CP006568.1 Protein Homology CDS 4448287 4448703 . - 0 ID=cds4422;Parent=gene4482;Dbxref=Genbank:WP_025246953.1;Name=WP_025246953.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246953.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4448676 4449071 . - . ID=gene4483;Name=SOPEG_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS21995 NZ_CP006568.1 GeneMarkS+ CDS 4448676 4449071 . - 0 ID=cds4423;Parent=gene4483;Dbxref=Genbank:WP_025246954.1;Name=WP_025246954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246954.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4449166 4449504 . - . ID=gene4484;Name=SOPEG_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22000 NZ_CP006568.1 Protein Homology CDS 4449166 4449504 . - 0 ID=cds4424;Parent=gene4484;Dbxref=Genbank:WP_038469228.1;Name=WP_038469228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469228.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4449543 4449770 . - . ID=gene4485;Name=SOPEG_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22005 NZ_CP006568.1 GeneMarkS+ CDS 4449543 4449770 . - 0 ID=cds4425;Parent=gene4485;Dbxref=Genbank:WP_025246956.1;Name=WP_025246956.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246956.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4450220 4450519 . - . ID=gene4486;Name=SOPEG_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22010 NZ_CP006568.1 Protein Homology CDS 4450220 4450519 . - 0 ID=cds4426;Parent=gene4486;Dbxref=Genbank:WP_051419978.1;Name=WP_051419978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419978.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4450825 4451238 . + . ID=gene4487;Name=SOPEG_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22015;old_locus_tag=SOPEG_4091 NZ_CP006568.1 Protein Homology CDS 4450825 4451238 . + 0 ID=cds4427;Parent=gene4487;Dbxref=Genbank:WP_025246957.1;Name=WP_025246957.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_025246957.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4451346 4451801 . + . ID=gene4488;Name=SOPEG_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22020;old_locus_tag=SOPEG_4092 NZ_CP006568.1 Protein Homology CDS 4451346 4451801 . + 0 ID=cds4428;Parent=gene4488;Dbxref=Genbank:WP_025246958.1;Name=WP_025246958.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_025246958.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4451919 4453158 . - . ID=gene4489;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=pseudogene;locus_tag=SOPEG_RS22025;pseudo=true NZ_CP006568.1 Protein Homology CDS 4451919 4453158 . - 0 ID=cds4429;Parent=gene4489;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4453316 4454317 . - . ID=gene4490;Name=SOPEG_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22030;old_locus_tag=SOPEG_4094 NZ_CP006568.1 Protein Homology CDS 4453316 4454317 . - 0 ID=cds4430;Parent=gene4490;Dbxref=Genbank:WP_025246961.1;Name=WP_025246961.1;gbkey=CDS;product=membrane protein;protein_id=WP_025246961.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4454580 4455560 . - . ID=gene4491;Name=SOPEG_RS22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22035;pseudo=true NZ_CP006568.1 Protein Homology CDS 4454580 4455560 . - 0 ID=cds4431;Parent=gene4491;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=bifunctional glyoxylate/hydroxypyruvate reductase B;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4455723 4456189 . - . ID=gene4492;Name=SOPEG_RS22040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22040;pseudo=true NZ_CP006568.1 Protein Homology CDS 4455723 4456189 . - 0 ID=cds4432;Parent=gene4492;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4456426 4457340 . + . ID=gene4493;Name=SOPEG_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22045;old_locus_tag=SOPEG_4097 NZ_CP006568.1 Protein Homology CDS 4456426 4457340 . + 0 ID=cds4433;Parent=gene4493;Dbxref=Genbank:WP_025246962.1;Name=WP_025246962.1;gbkey=CDS;product=glycyl-tRNA synthetase subunit alpha;protein_id=WP_025246962.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4457350 4459419 . + . ID=gene4494;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SOPEG_RS22050;old_locus_tag=SOPEG_4098 NZ_CP006568.1 Protein Homology CDS 4457350 4459419 . + 0 ID=cds4434;Parent=gene4494;Dbxref=Genbank:WP_025246963.1;Name=WP_025246963.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase;protein_id=WP_025246963.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4459805 4460248 . + . ID=gene4495;Name=SOPEG_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23635;old_locus_tag=SOPEG_ps4099 NZ_CP006568.1 Protein Homology CDS 4459805 4460248 . + 0 ID=cds4435;Parent=gene4495;Dbxref=Genbank:WP_051419979.1;Name=WP_051419979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419979.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4460771 4462697 . + . ID=gene4496;Name=SOPEG_RS22060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22060;pseudo=true NZ_CP006568.1 Protein Homology CDS 4460771 4462697 . + 0 ID=cds4436;Parent=gene4496;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS mannitol transporter subunit IICBA;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4462797 4463945 . + . ID=gene4497;Name=SOPEG_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22065;old_locus_tag=SOPEG_4101 NZ_CP006568.1 Protein Homology CDS 4462797 4463945 . + 0 ID=cds4437;Parent=gene4497;Dbxref=Genbank:WP_025246964.1;Name=WP_025246964.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_025246964.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4464004 4464552 . + . ID=gene4498;Name=SOPEG_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22070;old_locus_tag=SOPEG_4102 NZ_CP006568.1 Protein Homology CDS 4464004 4464552 . + 0 ID=cds4438;Parent=gene4498;Dbxref=Genbank:WP_025246965.1;Name=WP_025246965.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246965.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4464736 4465353 . - . ID=gene4499;Name=SOPEG_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22075;old_locus_tag=SOPEG_4103 NZ_CP006568.1 Protein Homology CDS 4464736 4465353 . - 0 ID=cds4439;Parent=gene4499;Dbxref=Genbank:WP_025246966.1;Name=WP_025246966.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_025246966.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4465471 4466256 . - . ID=gene4500;Name=SOPEG_RS22080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22080;pseudo=true NZ_CP006568.1 Protein Homology CDS 4465471 4466256 . - 0 ID=cds4440;Parent=gene4500;gbkey=CDS;product=formate dehydrogenase;pseudo=true;transl_except=(pos:complement(4466032..4466034)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4466480 4467073 . + . ID=gene4501;Name=SOPEG_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22085 NZ_CP006568.1 Protein Homology CDS 4466480 4467073 . + 0 ID=cds4441;Parent=gene4501;Dbxref=Genbank:WP_025246967.1;Name=WP_025246967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246967.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4467374 4467919 . + . ID=gene4502;Name=SOPEG_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22090 NZ_CP006568.1 Protein Homology CDS 4467374 4467919 . + 0 ID=cds4442;Parent=gene4502;Dbxref=Genbank:WP_025246968.1;Name=WP_025246968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246968.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4468087 4469465 . + . ID=gene4503;Name=SOPEG_RS22095;end_range=4469465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22095;partial=true;pseudo=true NZ_CP006568.1 Protein Homology CDS 4468087 4469465 . + 0 ID=cds4443;Parent=gene4503;Note=catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes;end_range=4469465,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=aldehyde dehydrogenase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4469493 4469903 . - . ID=gene4504;Name=SOPEG_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22100 NZ_CP006568.1 Protein Homology CDS 4469493 4469903 . - 0 ID=cds4444;Parent=gene4504;Dbxref=Genbank:WP_025246969.1;Name=WP_025246969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246969.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4469859 4472464 . + . ID=id648;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4470031 4470417 . + . ID=gene4505;Name=SOPEG_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23640 NZ_CP006568.1 Protein Homology CDS 4470031 4470417 . + 0 ID=cds4445;Parent=gene4505;Dbxref=Genbank:WP_025246970.1;Name=WP_025246970.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246970.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4470555 4471580 . + . ID=gene4506;Name=SOPEG_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22105 NZ_CP006568.1 Protein Homology CDS 4470555 4471580 . + 0 ID=cds4446;Parent=gene4506;Dbxref=Genbank:WP_025246971.1;Name=WP_025246971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246971.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4471592 4472341 . + . ID=gene4507;Name=SOPEG_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22110;old_locus_tag=SOPEG_4110 NZ_CP006568.1 Protein Homology CDS 4471592 4472341 . + 0 ID=cds4447;Parent=gene4507;Dbxref=Genbank:WP_038469234.1;Name=WP_038469234.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038469234.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4472424 4473109 . - . ID=gene4508;Name=SOPEG_RS22115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22115;partial=true;pseudo=true;start_range=.,4472424 NZ_CP006568.1 Protein Homology CDS 4472424 4473109 . - 0 ID=cds4448;Parent=gene4508;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=multidrug transporter;pseudo=true;start_range=.,4472424;transl_table=11 NZ_CP006568.1 RefSeq gene 4473398 4474408 . + . ID=gene4509;Name=SOPEG_RS22120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22120;pseudo=true NZ_CP006568.1 Protein Homology CDS 4473398 4474408 . + 0 ID=cds4449;Parent=gene4509;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=acetyltransferase;pseudo=true;transl_except=(pos:4474085..4474087%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4474572 4475487 . - . ID=gene4510;Name=SOPEG_RS22125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22125;pseudo=true NZ_CP006568.1 Protein Homology CDS 4474572 4475487 . - 0 ID=cds4450;Parent=gene4510;exception=annotated by transcript or proteomic data;gbkey=CDS;product=AraC family transcriptional regulator;pseudo=true;transl_except=(pos:complement(4475217..4475219)%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4475651 4476085 . - . ID=gene4511;Name=SOPEG_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23645;old_locus_tag=SOPEG_ps4113 NZ_CP006568.1 Protein Homology CDS 4475651 4476085 . - 0 ID=cds4451;Parent=gene4511;Dbxref=Genbank:WP_051419980.1;Name=WP_051419980.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419980.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4476101 4477429 . + . ID=id649;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4476185 4477120 . + . ID=gene4512;Name=SOPEG_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22135 NZ_CP006568.1 Protein Homology CDS 4476185 4477120 . + 0 ID=cds4452;Parent=gene4512;Dbxref=Genbank:WP_051419981.1;Name=WP_051419981.1;gbkey=CDS;product=transposase;protein_id=WP_051419981.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4477175 4477393 . + . ID=gene4513;Name=SOPEG_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22140 NZ_CP006568.1 Protein Homology CDS 4477175 4477393 . + 0 ID=cds4453;Parent=gene4513;Dbxref=Genbank:WP_025243935.1;Name=WP_025243935.1;gbkey=CDS;product=transposase;protein_id=WP_025243935.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4477428 4477811 . - . ID=gene4514;Name=SOPEG_RS22145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22145;partial=true;pseudo=true;start_range=.,4477428 NZ_CP006568.1 Protein Homology CDS 4477428 4477811 . - 0 ID=cds4454;Parent=gene4514;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,4477428;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4477434 4477921 . + . ID=id650;gbkey=repeat_region NZ_CP006568.1 RefSeq repeat_region 4477923 4480492 . + . ID=id651;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4477961 4479169 . - . ID=gene4515;Name=SOPEG_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22150;old_locus_tag=SOPEG_4116 NZ_CP006568.1 Protein Homology CDS 4477961 4479169 . - 0 ID=cds4455;Parent=gene4515;Dbxref=Genbank:WP_025246973.1;Name=WP_025246973.1;gbkey=CDS;product=transposase;protein_id=WP_025246973.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4479230 4480162 . - . ID=gene4516;Name=SOPEG_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22155 NZ_CP006568.1 Protein Homology CDS 4479230 4480162 . - 0 ID=cds4456;Parent=gene4516;Dbxref=Genbank:WP_025246974.1;Name=WP_025246974.1;gbkey=CDS;product=transposase;protein_id=WP_025246974.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4481099 4482463 . - . ID=gene4517;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=SOPEG_RS22160;old_locus_tag=SOPEG_4119 NZ_CP006568.1 Protein Homology CDS 4481099 4482463 . - 0 ID=cds4457;Parent=gene4517;Dbxref=Genbank:WP_025246975.1;Name=WP_025246975.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=WP_025246975.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4482562 4484205 . - . ID=gene4518;Name=SOPEG_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22165;old_locus_tag=SOPEG_4120 NZ_CP006568.1 Protein Homology CDS 4482562 4484205 . - 0 ID=cds4458;Parent=gene4518;Dbxref=Genbank:WP_025246976.1;Name=WP_025246976.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=membrane protein insertase;protein_id=WP_025246976.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4484429 4484755 . - . ID=gene4519;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SOPEG_RS22170;old_locus_tag=SOPEG_4122 NZ_CP006568.1 Protein Homology CDS 4484429 4484755 . - 0 ID=cds4459;Parent=gene4519;Dbxref=Genbank:WP_025246977.1;Name=WP_025246977.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_025246977.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4485586 4486980 . + . ID=gene4520;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SOPEG_RS22175;old_locus_tag=SOPEG_4124 NZ_CP006568.1 Protein Homology CDS 4485586 4486980 . + 0 ID=cds4460;Parent=gene4520;Dbxref=Genbank:WP_025246978.1;Name=WP_025246978.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_025246978.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4486983 4488083 . + . ID=gene4521;Name=SOPEG_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22180;old_locus_tag=SOPEG_4125 NZ_CP006568.1 Protein Homology CDS 4486983 4488083 . + 0 ID=cds4461;Parent=gene4521;Dbxref=Genbank:WP_025246979.1;Name=WP_025246979.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_025246979.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4488110 4489181 . + . ID=gene4522;Name=recF;gbkey=Gene;gene=recF;gene_biotype=pseudogene;locus_tag=SOPEG_RS22185;pseudo=true NZ_CP006568.1 Protein Homology CDS 4488110 4489181 . + 0 ID=cds4462;Parent=gene4522;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=recF;product=recombination protein F;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4489200 4491626 . + . ID=gene4523;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SOPEG_RS22190;old_locus_tag=SOPEG_4127 NZ_CP006568.1 Protein Homology CDS 4489200 4491626 . + 0 ID=cds4463;Parent=gene4523;Dbxref=Genbank:WP_025246980.1;Name=WP_025246980.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_025246980.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4491656 4492716 . + . ID=id652;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4491714 4492637 . - . ID=gene4524;Name=SOPEG_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22195;old_locus_tag=SOPEG_4128 NZ_CP006568.1 Protein Homology CDS 4491714 4492637 . - 0 ID=cds4464;Parent=gene4524;Dbxref=Genbank:WP_025246981.1;Name=WP_025246981.1;gbkey=CDS;product=transposase;protein_id=WP_025246981.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4493084 4493928 . + . ID=gene4525;Name=SOPEG_RS22200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22200;pseudo=true NZ_CP006568.1 Protein Homology CDS 4493084 4493928 . + 0 ID=cds4465;Parent=gene4525;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar phosphatase;pseudo=true;transl_table=11 NZ_CP006568.1 RefSeq gene 4494104 4494802 . + . ID=gene4526;Name=SOPEG_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22205;old_locus_tag=SOPEG_4130 NZ_CP006568.1 Protein Homology CDS 4494104 4494802 . + 0 ID=cds4466;Parent=gene4526;Dbxref=Genbank:WP_025246982.1;Name=WP_025246982.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246982.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4495005 4498891 . + . ID=id653;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4495208 4496725 . + . ID=gene4527;Name=SOPEG_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22210;old_locus_tag=SOPEG_4132 NZ_CP006568.1 Protein Homology CDS 4495208 4496725 . + 0 ID=cds4467;Parent=gene4527;Dbxref=Genbank:WP_025246983.1;Name=WP_025246983.1;gbkey=CDS;product=transposase;protein_id=WP_025246983.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4496737 4497485 . + . ID=gene4528;Name=SOPEG_RS22215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22215;pseudo=true NZ_CP006568.1 Protein Homology CDS 4496737 4497485 . + 0 ID=cds4468;Parent=gene4528;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:4497012..4497014%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4497661 4498854 . + . ID=gene4529;Name=SOPEG_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22220;old_locus_tag=SOPEG_4134 NZ_CP006568.1 Protein Homology CDS 4497661 4498854 . + 0 ID=cds4469;Parent=gene4529;Dbxref=Genbank:WP_025246984.1;Name=WP_025246984.1;gbkey=CDS;product=transposase;protein_id=WP_025246984.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4498941 4499016 . - . ID=gene4530;Name=SOPEG_RS22225;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS22225;old_locus_tag=SOPEG_t4135 NZ_CP006568.1 tRNAscan-SE tRNA 4498941 4499016 . - . ID=rna60;Parent=gene4530;anticodon=(pos:complement(4498981..4498983));gbkey=tRNA;product=tRNA-Trp NZ_CP006568.1 tRNAscan-SE exon 4498941 4499016 . - . ID=id654;Parent=rna60;anticodon=(pos:complement(4498981..4498983));gbkey=tRNA;product=tRNA-Trp NZ_CP006568.1 RefSeq gene 4499025 4499101 . - . ID=gene4531;Name=SOPEG_RS22230;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS22230;old_locus_tag=SOPEG_t4136 NZ_CP006568.1 tRNAscan-SE tRNA 4499025 4499101 . - . ID=rna61;Parent=gene4531;anticodon=(pos:complement(4499065..4499067));gbkey=tRNA;product=tRNA-Asp NZ_CP006568.1 tRNAscan-SE exon 4499025 4499101 . - . ID=id655;Parent=rna61;anticodon=(pos:complement(4499065..4499067));gbkey=tRNA;product=tRNA-Asp NZ_CP006568.1 RefSeq repeat_region 4499235 4499576 . + . ID=id656;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4499237 4499352 . - . ID=gene4532;Name=SOPEG_RS22235;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS22235;old_locus_tag=SOPEG_r4137 NZ_CP006568.1 cmsearch rRNA 4499237 4499352 . - . ID=rna62;Parent=gene4532;gbkey=rRNA;product=5S ribosomal RNA NZ_CP006568.1 cmsearch exon 4499237 4499352 . - . ID=id657;Parent=rna62;gbkey=rRNA;product=5S ribosomal RNA NZ_CP006568.1 RefSeq repeat_region 4499580 4500900 . + . ID=id658;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4499617 4500393 . - . ID=gene4533;Name=SOPEG_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22240 NZ_CP006568.1 Protein Homology CDS 4499617 4500393 . - 0 ID=cds4470;Parent=gene4533;Dbxref=Genbank:WP_038469238.1;Name=WP_038469238.1;gbkey=CDS;product=transposase;protein_id=WP_038469238.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4500469 4500825 . - . ID=gene4534;Name=SOPEG_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22245 NZ_CP006568.1 Protein Homology CDS 4500469 4500825 . - 0 ID=cds4471;Parent=gene4534;Dbxref=Genbank:WP_038469241.1;Name=WP_038469241.1;gbkey=CDS;product=transposase;protein_id=WP_038469241.1;transl_table=11 NZ_CP006568.1 RefSeq repeat_region 4500904 4504220 . + . ID=id659;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4500936 4503872 . - . ID=gene4535;Name=SOPEG_RS22250;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS22250;old_locus_tag=SOPEG_r4139 NZ_CP006568.1 RefSeq rRNA 4500936 4503872 . - . ID=rna63;Parent=gene4535;gbkey=rRNA;product=23S ribosomal RNA NZ_CP006568.1 RefSeq exon 4500936 4503872 . - . ID=id660;Parent=rna63;gbkey=rRNA;product=23S ribosomal RNA NZ_CP006568.1 RefSeq gene 4504231 4504306 . - . ID=gene4536;Name=SOPEG_RS22255;gbkey=Gene;gene_biotype=tRNA;locus_tag=SOPEG_RS22255;old_locus_tag=SOPEG_t4140 NZ_CP006568.1 tRNAscan-SE tRNA 4504231 4504306 . - . ID=rna64;Parent=gene4536;anticodon=(pos:complement(4504270..4504272));gbkey=tRNA;product=tRNA-Glu NZ_CP006568.1 tRNAscan-SE exon 4504231 4504306 . - . ID=id661;Parent=rna64;anticodon=(pos:complement(4504270..4504272));gbkey=tRNA;product=tRNA-Glu NZ_CP006568.1 RefSeq repeat_region 4504456 4506391 . + . ID=id662;gbkey=repeat_region NZ_CP006568.1 RefSeq gene 4504528 4506075 . - . ID=gene4537;Name=SOPEG_RS22260;gbkey=Gene;gene_biotype=rRNA;locus_tag=SOPEG_RS22260;old_locus_tag=SOPEG_r4141 NZ_CP006568.1 RefSeq rRNA 4504528 4506075 . - . ID=rna65;Parent=gene4537;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq exon 4504528 4506075 . - . ID=id663;Parent=rna65;gbkey=rRNA;product=16S ribosomal RNA NZ_CP006568.1 RefSeq gene 4506716 4506985 . + . ID=gene4538;Name=SOPEG_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS23650 NZ_CP006568.1 Protein Homology CDS 4506716 4506985 . + 0 ID=cds4472;Parent=gene4538;Dbxref=Genbank:WP_051419982.1;Name=WP_051419982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_051419982.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4506990 4508858 . - . ID=gene4539;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=SOPEG_RS22270;old_locus_tag=SOPEG_4143 NZ_CP006568.1 Protein Homology CDS 4506990 4508858 . - 0 ID=cds4473;Parent=gene4539;Dbxref=Genbank:WP_025246985.1;Name=WP_025246985.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=potassium transporter Kup;protein_id=WP_025246985.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4509100 4510641 . + . ID=gene4540;Name=SOPEG_RS22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SOPEG_RS22275;pseudo=true NZ_CP006568.1 Protein Homology CDS 4509100 4510641 . + 0 ID=cds4474;Parent=gene4540;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase;pseudo=true;transl_except=(pos:4509988..4509990%2Caa:Other);transl_table=11 NZ_CP006568.1 RefSeq gene 4510601 4512070 . + . ID=gene4541;Name=SOPEG_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22280;old_locus_tag=SOPEG_4145 NZ_CP006568.1 Protein Homology CDS 4510601 4512070 . + 0 ID=cds4475;Parent=gene4541;Dbxref=Genbank:WP_025246986.1;Name=WP_025246986.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=hypothetical protein;protein_id=WP_025246986.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4512124 4512585 . + . ID=gene4542;Name=SOPEG_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22285;old_locus_tag=SOPEG_4146 NZ_CP006568.1 Protein Homology CDS 4512124 4512585 . + 0 ID=cds4476;Parent=gene4542;Dbxref=Genbank:WP_025246987.1;Name=WP_025246987.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_025246987.1;transl_table=11 NZ_CP006568.1 RefSeq gene 4512675 4513127 . + . ID=gene4543;Name=SOPEG_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SOPEG_RS22290;old_locus_tag=SOPEG_4147 NZ_CP006568.1 Protein Homology CDS 4512675 4513127 . + 0 ID=cds4477;Parent=gene4543;Dbxref=Genbank:WP_025246988.1;Name=WP_025246988.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_025246988.1;transl_table=11 ###