CCNA_00001 PF03618 CCNA_00001 CCNA_00002 PF02545 Maf-like protein CCNA_00003 PF01488 Shikimate / quinate 5-dehydrogenase CCNA_00003 PF08501 Shikimate dehydrogenase substrate binding domain CCNA_00004 PF01121 Dephospho-CoA kinase CCNA_00005 PF00929 Exonuclease CCNA_00006 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_00007 PF01649 Ribosomal protein S20 CCNA_00008 PF00308 Bacterial dnaA protein CCNA_00008 PF08299 Bacterial dnaA protein helix-turn-helix CCNA_00008 PF11638 DnaA N-terminal domain CCNA_00009 PF13532 2OG-Fe(II) oxygenase superfamily CCNA_00010 PF00012 Hsp70 protein CCNA_00011 PF00226 DnaJ domain CCNA_00011 PF00684 DnaJ central domain CCNA_00011 PF01556 DnaJ C terminal domain CCNA_00012 PF00488 MutS domain V CCNA_00012 PF01624 MutS domain I CCNA_00012 PF05188 MutS domain II CCNA_00012 PF05190 MutS family domain IV CCNA_00012 PF05192 MutS domain III CCNA_00013 PF01966 HD domain CCNA_00013 PF08335 GlnD PII-uridylyltransferase CCNA_00014 PF01967 MoaC family CCNA_00015 PF00994 Probable molybdopterin binding domain CCNA_00016 PF02391 MoaE protein CCNA_00017 PF02597 ThiS family CCNA_00018 PF04055 Radical SAM superfamily CCNA_00018 PF06463 Molybdenum Cofactor Synthesis C CCNA_00018 PF13353 4Fe-4S single cluster domain CCNA_00019 PF12804 MobA-like NTP transferase domain CCNA_00021 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCNA_00022 PF00111 2Fe-2S iron-sulfur cluster binding domain CCNA_00022 PF01799 [2Fe-2S] binding domain CCNA_00023 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CCNA_00024 PF10414 Sirohaem synthase dimerisation region CCNA_00024 PF13241 Putative NAD(P)-binding CCNA_00025 PF00083 Sugar (and other) transporter CCNA_00026 PF00072 Response regulator receiver domain CCNA_00026 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00026 PF00989 PAS fold CCNA_00026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00026 PF08447 PAS fold CCNA_00026 PF08448 PAS fold CCNA_00027 PF13640 2OG-Fe(II) oxygenase superfamily CCNA_00028 PF00593 TonB dependent receptor CCNA_00028 PF07715 TonB-dependent Receptor Plug Domain CCNA_00029 PF01810 CCNA_00029 CCNA_00030 PF00445 Ribonuclease T2 family CCNA_00031 PF01850 PIN domain CCNA_00032 PF04014 Antidote-toxin recognition MazE CCNA_00033 PF00013 KH domain CCNA_00033 PF00575 S1 RNA binding domain CCNA_00033 PF01138 3' exoribonuclease family, domain 1 CCNA_00033 PF03725 3' exoribonuclease family, domain 2 CCNA_00033 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCNA_00034 PF00312 Ribosomal protein S15 CCNA_00035 PF01509 TruB family pseudouridylate synthase (N terminal domain) CCNA_00035 PF16198 CCNA_00035 CCNA_00036 PF02033 Ribosome-binding factor A CCNA_00037 PF01738 Dienelactone hydrolase family CCNA_00039 PF11159 CCNA_00039 CCNA_00040 PF14317 CCNA_00040 CCNA_00041 PF00009 Elongation factor Tu GTP binding domain CCNA_00041 PF04760 Translation initiation factor IF-2, N-terminal region CCNA_00041 PF08364 CCNA_00041 CCNA_00041 PF11987 Translation-initiation factor 2 CCNA_00042 PF04296 Protein of unknown function (DUF448) CCNA_00043 PF00575 S1 RNA binding domain CCNA_00043 PF08529 NusA N-terminal domain CCNA_00043 PF13184 NusA-like KH domain CCNA_00043 PF14520 Helix-hairpin-helix domain CCNA_00044 PF02576 Uncharacterised BCR, YhbC family COG0779 CCNA_00045 PF00719 Inorganic pyrophosphatase CCNA_00047 PF02390 Putative methyltransferase CCNA_00048 PF00438 S-adenosylmethionine synthetase, N-terminal domain CCNA_00048 PF02772 S-adenosylmethionine synthetase, central domain CCNA_00048 PF02773 S-adenosylmethionine synthetase, C-terminal domain CCNA_00049 PF01381 Helix-turn-helix CCNA_00050 PF00795 Carbon-nitrogen hydrolase CCNA_00051 PF00571 CBS domain CCNA_00051 PF03471 Transporter associated domain CCNA_00052 PF02130 Uncharacterized protein family UPF0054 CCNA_00053 PF02562 PhoH-like protein CCNA_00054 PF00919 Uncharacterized protein family UPF0004 CCNA_00054 PF01938 TRAM domain CCNA_00054 PF04055 Radical SAM superfamily CCNA_00055 PF01475 Ferric uptake regulator family CCNA_00056 PF00583 Acetyltransferase (GNAT) family CCNA_00057 PF00814 Glycoprotease family CCNA_00058 PF06572 Protein of unknown function (DUF1131) CCNA_00059 PF00881 Nitroreductase family CCNA_00060 PF01106 NifU-like domain CCNA_00060 PF08712 Scaffold protein Nfu/NifU N terminal CCNA_00061 PF00067 Cytochrome P450 CCNA_00062 PF00579 tRNA synthetases class I (W and Y) CCNA_00063 PF03023 CCNA_00063 CCNA_00064 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00064 PF00672 HAMP domain CCNA_00065 PF13578 Methyltransferase domain CCNA_00066 PF00355 Rieske [2Fe-2S] domain CCNA_00067 PF03795 YCII-related domain CCNA_00068 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CCNA_00068 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CCNA_00069 PF00814 Glycoprotease family CCNA_00070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CCNA_00070 PF03900 Porphobilinogen deaminase, C-terminal domain CCNA_00071 PF02602 Uroporphyrinogen-III synthase HemD CCNA_00072 PF09731 CCNA_00072 CCNA_00073 PF07219 CCNA_00073 CCNA_00074 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_00074 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCNA_00074 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCNA_00075 PF00108 Thiolase, N-terminal domain CCNA_00075 PF02803 Thiolase, C-terminal domain CCNA_00077 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_00077 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_00077 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_00078 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_00078 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_00078 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_00078 PF12418 CCNA_00078 CCNA_00078 PF12806 CCNA_00078 CCNA_00079 PF09278 MerR, DNA binding CCNA_00080 PF00717 Peptidase S24-like CCNA_00082 PF01921 tRNA synthetases class I (K) CCNA_00083 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCNA_00083 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCNA_00083 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCNA_00083 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCNA_00084 PF01808 AICARFT/IMPCHase bienzyme CCNA_00084 PF02142 MGS-like domain CCNA_00085 PF00326 Prolyl oligopeptidase family CCNA_00086 PF05088 CCNA_00086 CCNA_00087 PF01594 CCNA_00087 CCNA_00088 PF05872 CCNA_00088 CCNA_00089 PF00563 EAL domain CCNA_00089 PF00989 PAS fold CCNA_00089 PF00990 GGDEF domain CCNA_00089 PF03707 CCNA_00089 CCNA_00090 PF16363 CCNA_00090 CCNA_00091 PF00892 EamA-like transporter family CCNA_00092 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_00094 PF03808 CCNA_00094 CCNA_00095 PF00107 Zinc-binding dehydrogenase CCNA_00095 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_00096 PF01112 Asparaginase CCNA_00099 PF07940 Heparinase II/III-like protein CCNA_00100 PF00834 Ribulose-phosphate 3 epimerase family CCNA_00101 PF01029 NusB family CCNA_00101 PF01189 NOL1/NOP2/sun family CCNA_00102 PF07896 Protein of unknown function (DUF1674) CCNA_00103 PF01019 Gamma-glutamyltranspeptidase CCNA_00104 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCNA_00105 PF01914 CCNA_00105 CCNA_00106 PF01494 FAD binding domain CCNA_00107 PF03966 Trm112p-like protein CCNA_00108 PF02190 ATP-dependent protease La (LON) domain CCNA_00109 PF00085 Thioredoxin CCNA_00109 PF14559 Tetratricopeptide repeat CCNA_00109 PF14561 Tetratricopeptide repeat CCNA_00110 PF04073 Aminoacyl-tRNA editing domain CCNA_00114 PF13601 Winged helix DNA-binding domain CCNA_00115 PF01979 Amidohydrolase family CCNA_00115 PF07676 WD40-like Beta Propeller Repeat CCNA_00116 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCNA_00116 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCNA_00116 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCNA_00116 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCNA_00117 PF01380 SIS domain CCNA_00117 PF13522 Glutamine amidotransferase domain CCNA_00118 PF13432 Tetratricopeptide repeat CCNA_00118 PF13844 Glycosyl transferase family 41 CCNA_00118 PF14559 Tetratricopeptide repeat CCNA_00119 PF01980 Uncharacterised protein family UPF0066 CCNA_00122 PF06803 CCNA_00122 CCNA_00123 PF00106 short chain dehydrogenase CCNA_00125 PF01810 CCNA_00125 CCNA_00126 PF01124 MAPEG family CCNA_00127 PF13619 CCNA_00127 CCNA_00128 PF00764 Arginosuccinate synthase CCNA_00130 PF02705 CCNA_00130 CCNA_00131 PF02082 Transcriptional regulator CCNA_00132 PF00106 short chain dehydrogenase CCNA_00133 PF04055 Radical SAM superfamily CCNA_00133 PF13394 4Fe-4S single cluster domain CCNA_00134 PF03994 CCNA_00134 CCNA_00135 PF13365 Trypsin-like peptidase domain CCNA_00136 PF07690 Major Facilitator Superfamily CCNA_00137 PF00072 Response regulator receiver domain CCNA_00137 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00138 PF00593 TonB dependent receptor CCNA_00138 PF07715 TonB-dependent Receptor Plug Domain CCNA_00139 PF01078 Magnesium chelatase, subunit ChlI CCNA_00139 PF13335 CCNA_00139 CCNA_00139 PF13541 Subunit ChlI of Mg-chelatase CCNA_00140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CCNA_00140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CCNA_00141 PF13369 CCNA_00141 CCNA_00141 PF13371 Tetratricopeptide repeat CCNA_00142 PF02021 Uncharacterised protein family UPF0102 CCNA_00143 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCNA_00144 PF04055 Radical SAM superfamily CCNA_00144 PF06969 HemN C-terminal domain CCNA_00145 PF01725 Ham1 family CCNA_00146 PF13417 Glutathione S-transferase, N-terminal domain CCNA_00148 PF11188 CCNA_00148 CCNA_00149 PF13443 Cro/C1-type HTH DNA-binding domain CCNA_00150 PF13180 PDZ domain CCNA_00150 PF13365 Trypsin-like peptidase domain CCNA_00151 PF01138 3' exoribonuclease family, domain 1 CCNA_00151 PF03725 3' exoribonuclease family, domain 2 CCNA_00152 PF01628 HrcA protein C terminal domain CCNA_00153 PF01025 GrpE CCNA_00154 PF09834 CCNA_00154 CCNA_00155 PF00712 DNA polymerase III beta subunit, N-terminal domain CCNA_00155 PF02767 DNA polymerase III beta subunit, central domain CCNA_00155 PF02768 DNA polymerase III beta subunit, C-terminal domain CCNA_00156 PF12840 Helix-turn-helix domain CCNA_00157 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_00158 PF02463 RecF/RecN/SMC N terminal domain CCNA_00159 PF00204 DNA gyrase B CCNA_00159 PF00986 DNA gyrase B subunit, carboxyl terminus CCNA_00159 PF01751 Toprim domain CCNA_00159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00162 PF10082 CCNA_00162 CCNA_00163 PF02706 Chain length determinant protein CCNA_00163 PF13614 AAA domain CCNA_00163 PF13807 CCNA_00163 CCNA_00164 PF04932 CCNA_00164 CCNA_00165 PF02397 CCNA_00165 CCNA_00166 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP CCNA_00167 PF00149 Calcineurin-like phosphoesterase CCNA_00168 PF02563 Polysaccharide biosynthesis/export protein CCNA_00168 PF10531 SLBB domain CCNA_00170 PF00593 TonB dependent receptor CCNA_00170 PF07715 TonB-dependent Receptor Plug Domain CCNA_00171 PF11356 Type IV pilus biogenesis CCNA_00172 PF00263 CCNA_00172 CCNA_00172 PF03958 Bacterial type II/III secretion system short domain CCNA_00173 PF00437 Type II/IV secretion system protein CCNA_00174 PF00482 Type II secretion system (T2SS), protein F CCNA_00175 PF08334 Type II secretion system (T2SS), protein G CCNA_00175 PF13544 CCNA_00175 CCNA_00176 PF12019 Type II transport protein GspH CCNA_00176 PF13544 CCNA_00176 CCNA_00177 PF02501 Type II secretion system (T2SS), protein I CCNA_00177 PF13633 Prokaryotic N-terminal methylation site CCNA_00178 PF07963 Prokaryotic N-terminal methylation motif CCNA_00178 PF11612 Type II secretion system (T2SS), protein J CCNA_00179 PF03934 Type II secretion system (T2SS), protein K CCNA_00180 PF05134 Type II secretion system (T2SS), protein L CCNA_00180 PF12693 GspL periplasmic domain CCNA_00181 PF04612 Type II secretion system (T2SS), protein M CCNA_00182 PF01203 CCNA_00182 CCNA_00183 PF01478 Type IV leader peptidase family CCNA_00183 PF06750 CCNA_00183 CCNA_00185 PF00593 TonB dependent receptor CCNA_00185 PF07715 TonB-dependent Receptor Plug Domain CCNA_00186 PF00860 Permease family CCNA_00187 PF06516 CCNA_00187 CCNA_00188 PF00005 ABC transporter CCNA_00189 PF10276 Zinc-finger domain CCNA_00190 PF03061 Thioesterase superfamily CCNA_00191 PF13508 Acetyltransferase (GNAT) domain CCNA_00192 PF00501 AMP-binding enzyme CCNA_00192 PF13193 AMP-binding enzyme C-terminal domain CCNA_00193 PF00180 Isocitrate/isopropylmalate dehydrogenase CCNA_00194 PF03992 Antibiotic biosynthesis monooxygenase CCNA_00195 PF00694 Aconitase C-terminal domain CCNA_00196 PF00330 Aconitase family (aconitate hydratase) CCNA_00197 PF01245 Ribosomal protein L19 CCNA_00198 PF01746 tRNA (Guanine-1)-methyltransferase CCNA_00199 PF13400 CCNA_00199 CCNA_00199 PF16190 CCNA_00199 CCNA_00200 PF03171 2OG-Fe(II) oxygenase superfamily CCNA_00200 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CCNA_00201 PF00691 OmpA family CCNA_00201 PF13441 CCNA_00201 CCNA_00202 PF00487 CCNA_00202 CCNA_00203 PF04116 CCNA_00203 CCNA_00204 PF00999 Sodium/hydrogen exchanger family CCNA_00204 PF02254 TrkA-N domain CCNA_00205 PF02525 Flavodoxin-like fold CCNA_00206 PF01144 Coenzyme A transferase CCNA_00207 PF01144 Coenzyme A transferase CCNA_00208 PF01965 DJ-1/PfpI family CCNA_00209 PF13231 CCNA_00209 CCNA_00210 PF00593 TonB dependent receptor CCNA_00210 PF07715 TonB-dependent Receptor Plug Domain CCNA_00211 PF04371 Porphyromonas-type peptidyl-arginine deiminase CCNA_00212 PF00795 Carbon-nitrogen hydrolase CCNA_00213 PF13302 Acetyltransferase (GNAT) domain CCNA_00214 PF00593 TonB dependent receptor CCNA_00214 PF07715 TonB-dependent Receptor Plug Domain CCNA_00215 PF07277 CCNA_00215 CCNA_00217 PF02683 CCNA_00217 CCNA_00217 PF11412 Disulphide bond corrector protein DsbC CCNA_00217 PF13899 Thioredoxin-like CCNA_00218 PF07087 CCNA_00218 CCNA_00220 PF00578 AhpC/TSA family CCNA_00222 PF00342 Phosphoglucose isomerase CCNA_00223 PF00561 alpha/beta hydrolase fold CCNA_00224 PF07715 TonB-dependent Receptor Plug Domain CCNA_00224 PF14905 Outer membrane protein beta-barrel family CCNA_00226 PF09857 CCNA_00226 CCNA_00227 PF03602 Conserved hypothetical protein 95 CCNA_00228 PF06736 CCNA_00228 CCNA_00229 PF02517 CAAX protease self-immunity CCNA_00230 PF00849 RNA pseudouridylate synthase CCNA_00230 PF01479 S4 domain CCNA_00231 PF14437 CCNA_00231 CCNA_00233 PF02719 Polysaccharide biosynthesis protein CCNA_00234 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCNA_00237 PF00072 Response regulator receiver domain CCNA_00237 PF00486 Transcriptional regulatory protein, C terminal CCNA_00238 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00238 PF00672 HAMP domain CCNA_00238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00238 PF13755 CCNA_00238 CCNA_00239 PF07475 HPr Serine kinase C-terminal domain CCNA_00240 PF03610 PTS system fructose IIA component CCNA_00241 PF00381 PTS HPr component phosphorylation site CCNA_00244 PF13419 Haloacid dehalogenase-like hydrolase CCNA_00245 PF01329 Pterin 4 alpha carbinolamine dehydratase CCNA_00246 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_00247 PF00072 Response regulator receiver domain CCNA_00247 PF02954 Bacterial regulatory protein, Fis family CCNA_00248 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00249 PF02630 SCO1/SenC CCNA_00250 PF06850 CCNA_00250 CCNA_00251 PF01863 Protein of unknown function DUF45 CCNA_00252 PF00905 Penicillin binding protein transpeptidase domain CCNA_00252 PF00912 Transglycosylase CCNA_00253 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCNA_00253 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCNA_00255 PF00144 Beta-lactamase CCNA_00256 PF08543 Phosphomethylpyrimidine kinase CCNA_00257 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CCNA_00257 PF05221 S-adenosyl-L-homocysteine hydrolase CCNA_00260 PF13417 Glutathione S-transferase, N-terminal domain CCNA_00261 PF00268 Ribonucleotide reductase, small chain CCNA_00262 PF02558 Ketopantoate reductase PanE/ApbA CCNA_00262 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCNA_00264 PF00375 Sodium:dicarboxylate symporter family CCNA_00265 PF01048 Phosphorylase superfamily CCNA_00265 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CCNA_00266 PF00108 Thiolase, N-terminal domain CCNA_00266 PF02803 Thiolase, C-terminal domain CCNA_00267 PF00293 NUDIX domain CCNA_00267 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CCNA_00267 PF09297 NADH pyrophosphatase zinc ribbon domain CCNA_00268 PF12169 DNA polymerase III subunits gamma and tau domain III CCNA_00268 PF12362 CCNA_00268 CCNA_00268 PF13177 DNA polymerase III, delta subunit CCNA_00269 PF02575 YbaB/EbfC DNA-binding family CCNA_00270 PF02132 RecR protein CCNA_00270 PF13662 Toprim domain CCNA_00272 PF02646 CCNA_00272 CCNA_00273 PF01327 Polypeptide deformylase CCNA_00275 PF05598 CCNA_00275 CCNA_00275 PF13751 CCNA_00275 CCNA_00276 PF07883 Cupin domain CCNA_00277 PF01546 Peptidase family M20/M25/M40 CCNA_00277 PF07687 Peptidase dimerisation domain CCNA_00278 PF04960 Glutaminase CCNA_00279 PF02525 Flavodoxin-like fold CCNA_00280 PF01416 tRNA pseudouridine synthase CCNA_00281 PF00551 Formyl transferase CCNA_00281 PF02911 Formyl transferase, C-terminal domain CCNA_00283 PF14602 Hexapeptide repeat of succinyl-transferase CCNA_00283 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CCNA_00284 PF13419 Haloacid dehalogenase-like hydrolase CCNA_00285 PF00696 Amino acid kinase family CCNA_00286 PF00072 Response regulator receiver domain CCNA_00287 PF07568 CCNA_00287 CCNA_00287 PF13426 PAS domain CCNA_00287 PF13581 Histidine kinase-like ATPase domain CCNA_00288 PF13531 Bacterial extracellular solute-binding protein CCNA_00291 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00291 PF13188 PAS domain CCNA_00292 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_00292 PF12501 CCNA_00292 CCNA_00293 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_00293 PF11812 CCNA_00293 CCNA_00294 PF00005 ABC transporter CCNA_00295 PF01895 PhoU domain CCNA_00296 PF00072 Response regulator receiver domain CCNA_00296 PF00486 Transcriptional regulatory protein, C terminal CCNA_00297 PF04397 LytTr DNA-binding domain CCNA_00298 PF10067 CCNA_00298 CCNA_00299 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CCNA_00299 PF02843 Phosphoribosylglycinamide synthetase, C domain CCNA_00299 PF02844 Phosphoribosylglycinamide synthetase, N domain CCNA_00300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_00301 PF01636 Phosphotransferase enzyme family CCNA_00302 PF01979 Amidohydrolase family CCNA_00303 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CCNA_00304 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CCNA_00305 PF01545 Cation efflux family CCNA_00306 PF04028 CCNA_00306 CCNA_00307 PF00005 ABC transporter CCNA_00307 PF00664 ABC transporter transmembrane region CCNA_00309 PF13773 Domain of unknown function (DUF4170) CCNA_00310 PF00459 Inositol monophosphatase family CCNA_00311 PF01523 Putative modulator of DNA gyrase CCNA_00312 PF01124 MAPEG family CCNA_00313 PF00246 Zinc carboxypeptidase CCNA_00315 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CCNA_00316 PF00696 Amino acid kinase family CCNA_00316 PF01472 PUA domain CCNA_00317 PF01018 GTP1/OBG CCNA_00317 PF01926 50S ribosome-binding GTPase CCNA_00319 PF13302 Acetyltransferase (GNAT) domain CCNA_00320 PF01016 Ribosomal L27 protein CCNA_00321 PF00829 Ribosomal prokaryotic L21 protein CCNA_00323 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCNA_00323 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCNA_00324 PF02472 Biopolymer transport protein ExbD/TolR CCNA_00327 PF00881 Nitroreductase family CCNA_00328 PF00912 Transglycosylase CCNA_00329 PF13302 Acetyltransferase (GNAT) domain CCNA_00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_00330 PF03459 TOBE domain CCNA_00331 PF13531 Bacterial extracellular solute-binding protein CCNA_00332 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_00333 PF04397 LytTr DNA-binding domain CCNA_00334 PF10067 CCNA_00334 CCNA_00335 PF09912 CCNA_00335 CCNA_00336 PF03055 Retinal pigment epithelial membrane protein CCNA_00337 PF00440 Bacterial regulatory proteins, tetR family CCNA_00338 PF00593 TonB dependent receptor CCNA_00338 PF07715 TonB-dependent Receptor Plug Domain CCNA_00339 PF07690 Major Facilitator Superfamily CCNA_00340 PF00549 CoA-ligase CCNA_00340 PF08442 ATP-grasp domain CCNA_00341 PF00549 CoA-ligase CCNA_00341 PF02629 CoA binding domain CCNA_00342 PF00676 Dehydrogenase E1 component CCNA_00342 PF02779 Transketolase, pyrimidine binding domain CCNA_00342 PF16078 CCNA_00342 CCNA_00342 PF16870 CCNA_00342 CCNA_00343 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCNA_00343 PF00364 Biotin-requiring enzyme CCNA_00343 PF02817 e3 binding domain CCNA_00344 PF11287 CCNA_00344 CCNA_00345 PF00756 Putative esterase CCNA_00346 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCNA_00346 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_00348 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00348 PF00672 HAMP domain CCNA_00349 PF00589 Phage integrase family CCNA_00349 PF02899 Phage integrase, N-terminal SAM-like domain CCNA_00350 PF04340 Protein of unknown function, DUF484 CCNA_00351 PF00270 DEAD/DEAH box helicase CCNA_00351 PF00271 Helicase conserved C-terminal domain CCNA_00352 PF03741 CCNA_00352 CCNA_00353 PF01757 CCNA_00353 CCNA_00354 PF05257 CHAP domain CCNA_00355 PF00805 Pentapeptide repeats (8 copies) CCNA_00356 PF06629 CCNA_00356 CCNA_00357 PF00561 alpha/beta hydrolase fold CCNA_00357 PF08386 TAP-like protein CCNA_00358 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_00359 PF05433 CCNA_00359 CCNA_00359 PF08239 Bacterial SH3 domain CCNA_00360 PF12697 Alpha/beta hydrolase family CCNA_00361 PF13279 Thioesterase-like superfamily CCNA_00362 PF01475 Ferric uptake regulator family CCNA_00363 PF01569 PAP2 superfamily CCNA_00364 PF01916 Deoxyhypusine synthase CCNA_00365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCNA_00365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCNA_00366 PF00005 ABC transporter CCNA_00367 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CCNA_00368 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_00369 PF00571 CBS domain CCNA_00369 PF01595 CCNA_00369 CCNA_00369 PF03471 Transporter associated domain CCNA_00370 PF00430 ATP synthase B/B' CF(0) CCNA_00371 PF00430 ATP synthase B/B' CF(0) CCNA_00372 PF00137 ATP synthase subunit C CCNA_00373 PF00119 ATP synthase A chain CCNA_00374 PF09527 CCNA_00374 CCNA_00376 PF01925 CCNA_00376 CCNA_00377 PF02463 RecF/RecN/SMC N terminal domain CCNA_00378 PF13462 Thioredoxin CCNA_00379 PF13462 Thioredoxin CCNA_00380 PF05258 CCNA_00380 CCNA_00381 PF00633 Helix-hairpin-helix motif CCNA_00381 PF00730 HhH-GPD superfamily base excision DNA repair protein CCNA_00381 PF14815 NUDIX domain CCNA_00382 PF01555 DNA methylase CCNA_00383 PF01351 Ribonuclease HII CCNA_00384 PF00722 Glycosyl hydrolases family 16 CCNA_00385 PF07690 Major Facilitator Superfamily CCNA_00386 PF03352 Methyladenine glycosylase CCNA_00388 PF00561 alpha/beta hydrolase fold CCNA_00389 PF01571 Aminomethyltransferase folate-binding domain CCNA_00389 PF08669 Glycine cleavage T-protein C-terminal barrel domain CCNA_00390 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCNA_00392 PF01979 Amidohydrolase family CCNA_00393 PF08281 Sigma-70, region 4 CCNA_00394 PF03795 YCII-related domain CCNA_00395 PF00501 AMP-binding enzyme CCNA_00396 PF07947 CCNA_00396 CCNA_00397 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCNA_00397 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCNA_00399 PF00753 Metallo-beta-lactamase superfamily CCNA_00400 PF12802 MarR family CCNA_00401 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_00402 PF13160 CCNA_00402 CCNA_00403 PF00106 short chain dehydrogenase CCNA_00405 PF00106 short chain dehydrogenase CCNA_00406 PF04993 TfoX N-terminal domain CCNA_00407 PF00583 Acetyltransferase (GNAT) family CCNA_00408 PF05977 Transmembrane secretion effector CCNA_00410 PF00583 Acetyltransferase (GNAT) family CCNA_00411 PF06938 Protein of unknown function (DUF1285) CCNA_00412 PF00293 NUDIX domain CCNA_00413 PF01743 Poly A polymerase head domain CCNA_00413 PF12627 Probable RNA and SrmB- binding site of polymerase A CCNA_00414 PF00117 Glutamine amidotransferase class-I CCNA_00415 PF13424 Tetratricopeptide repeat CCNA_00419 PF02469 Fasciclin domain CCNA_00421 PF02152 Dihydroneopterin aldolase CCNA_00422 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_00423 PF00293 NUDIX domain CCNA_00424 PF00171 Aldehyde dehydrogenase family CCNA_00426 PF04480 Protein of unknown function (DUF559) CCNA_00428 PF12244 CCNA_00428 CCNA_00432 PF01037 AsnC family CCNA_00432 PF13404 AsnC-type helix-turn-helix domain CCNA_00434 PF03601 CCNA_00434 CCNA_00435 PF13520 Amino acid permease CCNA_00436 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_00436 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_00436 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_00437 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00437 PF11563 Protoglobin CCNA_00439 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00439 PF00672 HAMP domain CCNA_00440 PF13466 STAS domain CCNA_00441 PF00072 Response regulator receiver domain CCNA_00442 PF01584 CheW-like domain CCNA_00442 PF01627 Hpt domain CCNA_00442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00442 PF02895 Signal transducing histidine kinase, homodimeric domain CCNA_00443 PF01584 CheW-like domain CCNA_00444 PF01739 CheR methyltransferase, SAM binding domain CCNA_00444 PF03705 CheR methyltransferase, all-alpha domain CCNA_00445 PF00072 Response regulator receiver domain CCNA_00445 PF01339 CheB methylesterase CCNA_00446 PF00072 Response regulator receiver domain CCNA_00447 PF03975 CheD chemotactic sensory transduction CCNA_00449 PF00072 Response regulator receiver domain CCNA_00451 PF00593 TonB dependent receptor CCNA_00451 PF07715 TonB-dependent Receptor Plug Domain CCNA_00452 PF01979 Amidohydrolase family CCNA_00453 PF01380 SIS domain CCNA_00454 PF00392 Bacterial regulatory proteins, gntR family CCNA_00454 PF07702 UTRA domain CCNA_00455 PF00593 TonB dependent receptor CCNA_00455 PF07715 TonB-dependent Receptor Plug Domain CCNA_00456 PF00728 Glycosyl hydrolase family 20, catalytic domain CCNA_00456 PF02838 Glycosyl hydrolase family 20, domain 2 CCNA_00456 PF13290 CCNA_00456 CCNA_00457 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCNA_00457 PF00381 PTS HPr component phosphorylation site CCNA_00457 PF00391 PEP-utilising enzyme, mobile domain CCNA_00457 PF02896 PEP-utilising enzyme, TIM barrel domain CCNA_00457 PF05524 PEP-utilising enzyme, N-terminal CCNA_00458 PF00367 phosphotransferase system, EIIB CCNA_00458 PF02378 Phosphotransferase system, EIIC CCNA_00459 PF06965 Na+/H+ antiporter 1 CCNA_00464 PF02397 CCNA_00464 CCNA_00465 PF03275 UDP-galactopyranose mutase CCNA_00465 PF13450 NAD(P)-binding Rossmann-like domain CCNA_00466 PF13692 Glycosyl transferases group 1 CCNA_00467 PF01943 CCNA_00467 CCNA_00467 PF14667 Polysaccharide biosynthesis C-terminal domain CCNA_00469 PF00534 Glycosyl transferases group 1 CCNA_00471 PF01370 NAD dependent epimerase/dehydratase family CCNA_00472 PF16363 CCNA_00472 CCNA_00474 PF08751 TrwC relaxase CCNA_00474 PF13604 AAA domain CCNA_00475 PF10412 Type IV secretion-system coupling protein DNA-binding domain CCNA_00479 PF13560 Helix-turn-helix domain CCNA_00480 PF00589 Phage integrase family CCNA_00480 PF13356 Domain of unknown function (DUF4102) CCNA_00481 PF13560 Helix-turn-helix domain CCNA_00482 PF07804 HipA-like C-terminal domain CCNA_00482 PF07805 HipA-like N-terminal domain CCNA_00482 PF13657 HipA N-terminal domain CCNA_00483 PF00753 Metallo-beta-lactamase superfamily CCNA_00485 PF00849 RNA pseudouridylate synthase CCNA_00485 PF01479 S4 domain CCNA_00486 PF00593 TonB dependent receptor CCNA_00486 PF07715 TonB-dependent Receptor Plug Domain CCNA_00487 PF09423 PhoD-like phosphatase CCNA_00487 PF16655 CCNA_00487 CCNA_00488 PF01810 CCNA_00488 CCNA_00489 PF01502 Phosphoribosyl-AMP cyclohydrolase CCNA_00490 PF05675 CCNA_00490 CCNA_00491 PF01227 GTP cyclohydrolase I CCNA_00492 PF01406 tRNA synthetases class I (C) catalytic domain CCNA_00492 PF09190 DALR domain CCNA_00493 PF10604 Polyketide cyclase / dehydrase and lipid transport CCNA_00494 PF01592 NifU-like N terminal domain CCNA_00495 PF01809 CCNA_00495 CCNA_00496 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCNA_00496 PF02824 TGS domain CCNA_00496 PF03129 Anticodon binding domain CCNA_00496 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCNA_00497 PF13641 Glycosyltransferase like family 2 CCNA_00500 PF00682 HMGL-like CCNA_00501 PF13231 CCNA_00501 CCNA_00502 PF00535 Glycosyl transferase family 2 CCNA_00504 PF00588 SpoU rRNA Methylase family CCNA_00505 PF00355 Rieske [2Fe-2S] domain CCNA_00505 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CCNA_00506 PF00032 Cytochrome b(C-terminal)/b6/petD CCNA_00506 PF00033 Cytochrome b(N-terminal)/b6/petB CCNA_00507 PF02167 Cytochrome C1 family CCNA_00509 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_00510 PF01738 Dienelactone hydrolase family CCNA_00511 PF01738 Dienelactone hydrolase family CCNA_00512 PF01926 50S ribosome-binding GTPase CCNA_00512 PF06071 Protein of unknown function (DUF933) CCNA_00514 PF02678 Pirin CCNA_00514 PF05726 Pirin C-terminal cupin domain CCNA_00515 PF01717 Cobalamin-independent synthase, Catalytic domain CCNA_00515 PF08267 Cobalamin-independent synthase, N-terminal domain CCNA_00516 PF07721 Tetratricopeptide repeat CCNA_00516 PF14559 Tetratricopeptide repeat CCNA_00517 PF01195 Peptidyl-tRNA hydrolase CCNA_00518 PF01386 Ribosomal L25p family CCNA_00518 PF14693 Ribosomal protein TL5, C-terminal domain CCNA_00520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCNA_00520 PF14572 Phosphoribosyl synthetase-associated domain CCNA_00521 PF12441 CCNA_00521 CCNA_00522 PF04365 Protein of unknown function (DUF497) CCNA_00523 PF02578 Multi-copper polyphenol oxidoreductase laccase CCNA_00524 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CCNA_00525 PF01790 CCNA_00525 CCNA_00526 PF04380 CCNA_00526 CCNA_00527 PF10722 Putative bacterial sensory transduction regulator CCNA_00528 PF03807 NADP oxidoreductase coenzyme F420-dependent CCNA_00528 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCNA_00529 PF00440 Bacterial regulatory proteins, tetR family CCNA_00530 PF00466 Ribosomal protein L10 CCNA_00531 PF00542 Ribosomal protein L7/L12 C-terminal domain CCNA_00531 PF16320 CCNA_00531 CCNA_00532 PF06271 CCNA_00532 CCNA_00536 PF00562 RNA polymerase Rpb2, domain 6 CCNA_00536 PF04560 RNA polymerase Rpb2, domain 7 CCNA_00536 PF04561 RNA polymerase Rpb2, domain 2 CCNA_00536 PF04563 RNA polymerase beta subunit CCNA_00536 PF04565 RNA polymerase Rpb2, domain 3 CCNA_00536 PF10385 RNA polymerase beta subunit external 1 domain CCNA_00537 PF00623 RNA polymerase Rpb1, domain 2 CCNA_00537 PF04983 RNA polymerase Rpb1, domain 3 CCNA_00537 PF04997 RNA polymerase Rpb1, domain 1 CCNA_00537 PF04998 RNA polymerase Rpb1, domain 5 CCNA_00537 PF05000 RNA polymerase Rpb1, domain 4 CCNA_00538 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00538 PF00672 HAMP domain CCNA_00539 PF07632 Protein of unknown function (DUF1593) CCNA_00540 PF01218 Coproporphyrinogen III oxidase CCNA_00543 PF05233 CCNA_00543 CCNA_00543 PF07879 CCNA_00543 CCNA_00544 PF00108 Thiolase, N-terminal domain CCNA_00544 PF02803 Thiolase, C-terminal domain CCNA_00545 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_00546 PF16252 CCNA_00546 CCNA_00547 PF00356 Bacterial regulatory proteins, lacI family CCNA_00548 PF01527 Transposase CCNA_00549 PF13276 CCNA_00549 CCNA_00549 PF13683 CCNA_00549 CCNA_00550 PF13377 Periplasmic binding protein-like domain CCNA_00552 PF06172 Cupin superfamily (DUF985) CCNA_00553 PF00753 Metallo-beta-lactamase superfamily CCNA_00553 PF16123 CCNA_00553 CCNA_00554 PF08241 Methyltransferase domain CCNA_00555 PF00543 Nitrogen regulatory protein P-II CCNA_00556 PF13091 PLD-like domain CCNA_00557 PF03372 Endonuclease/Exonuclease/phosphatase family CCNA_00558 PF07021 Methionine biosynthesis protein MetW CCNA_00559 PF00561 alpha/beta hydrolase fold CCNA_00560 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_00561 PF06108 Protein of unknown function (DUF952) CCNA_00562 PF01180 Dihydroorotate dehydrogenase CCNA_00563 PF09335 CCNA_00563 CCNA_00564 PF00672 HAMP domain CCNA_00564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00565 PF01019 Gamma-glutamyltranspeptidase CCNA_00566 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCNA_00566 PF13378 Enolase C-terminal domain-like CCNA_00567 PF07971 Glycosyl hydrolase family 92 CCNA_00568 PF01979 Amidohydrolase family CCNA_00569 PF01380 SIS domain CCNA_00570 PF00392 Bacterial regulatory proteins, gntR family CCNA_00570 PF07702 UTRA domain CCNA_00571 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CCNA_00571 PF00381 PTS HPr component phosphorylation site CCNA_00571 PF00391 PEP-utilising enzyme, mobile domain CCNA_00571 PF02896 PEP-utilising enzyme, TIM barrel domain CCNA_00571 PF05524 PEP-utilising enzyme, N-terminal CCNA_00572 PF00367 phosphotransferase system, EIIB CCNA_00572 PF02378 Phosphotransferase system, EIIC CCNA_00573 PF00593 TonB dependent receptor CCNA_00573 PF07715 TonB-dependent Receptor Plug Domain CCNA_00574 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain CCNA_00574 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain CCNA_00574 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain CCNA_00575 PF07786 CCNA_00575 CCNA_00576 PF00328 Histidine phosphatase superfamily (branch 2) CCNA_00578 PF15979 CCNA_00578 CCNA_00579 PF01223 DNA/RNA non-specific endonuclease CCNA_00579 PF13365 Trypsin-like peptidase domain CCNA_00580 PF13191 AAA ATPase domain CCNA_00582 PF07087 CCNA_00582 CCNA_00586 PF04397 LytTr DNA-binding domain CCNA_00587 PF00561 alpha/beta hydrolase fold CCNA_00587 PF08386 TAP-like protein CCNA_00590 PF01494 FAD binding domain CCNA_00592 PF12902 Ferritin-like CCNA_00595 PF04773 FecR protein CCNA_00596 PF04542 Sigma-70 region 2 CCNA_00596 PF08281 Sigma-70, region 4 CCNA_00597 PF00593 TonB dependent receptor CCNA_00597 PF07715 TonB-dependent Receptor Plug Domain CCNA_00598 PF00593 TonB dependent receptor CCNA_00598 PF07715 TonB-dependent Receptor Plug Domain CCNA_00601 PF07726 ATPase family associated with various cellular activities (AAA) CCNA_00602 PF01882 CCNA_00602 CCNA_00603 PF01944 CCNA_00603 CCNA_00604 PF06271 CCNA_00604 CCNA_00607 PF00593 TonB dependent receptor CCNA_00607 PF07715 TonB-dependent Receptor Plug Domain CCNA_00608 PF12708 Pectate lyase superfamily protein CCNA_00608 PF13229 Right handed beta helix region CCNA_00609 PF00356 Bacterial regulatory proteins, lacI family CCNA_00609 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CCNA_00610 PF07971 Glycosyl hydrolase family 92 CCNA_00611 PF00144 Beta-lactamase CCNA_00612 PF01112 Asparaginase CCNA_00613 PF03575 Peptidase family S51 CCNA_00614 PF03606 CCNA_00614 CCNA_00615 PF00593 TonB dependent receptor CCNA_00615 PF07715 TonB-dependent Receptor Plug Domain CCNA_00616 PF01037 AsnC family CCNA_00616 PF13412 Winged helix-turn-helix DNA-binding CCNA_00617 PF04958 Arginine N-succinyltransferase beta subunit CCNA_00618 PF00171 Aldehyde dehydrogenase family CCNA_00619 PF04996 Succinylarginine dihydrolase CCNA_00620 PF00202 Aminotransferase class-III CCNA_00623 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00623 PF08447 PAS fold CCNA_00623 PF08448 PAS fold CCNA_00624 PF00805 Pentapeptide repeats (8 copies) CCNA_00625 PF00072 Response regulator receiver domain CCNA_00626 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00626 PF00672 HAMP domain CCNA_00628 PF00072 Response regulator receiver domain CCNA_00629 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_00629 PF00672 HAMP domain CCNA_00630 PF01584 CheW-like domain CCNA_00630 PF01627 Hpt domain CCNA_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00630 PF02895 Signal transducing histidine kinase, homodimeric domain CCNA_00631 PF01584 CheW-like domain CCNA_00632 PF00072 Response regulator receiver domain CCNA_00633 PF00072 Response regulator receiver domain CCNA_00633 PF01339 CheB methylesterase CCNA_00634 PF01739 CheR methyltransferase, SAM binding domain CCNA_00634 PF03705 CheR methyltransferase, all-alpha domain CCNA_00635 PF05226 CCNA_00635 CCNA_00637 PF12770 CCNA_00637 CCNA_00638 PF05860 haemagglutination activity domain CCNA_00639 PF01103 Surface antigen CCNA_00639 PF08479 POTRA domain, ShlB-type CCNA_00644 PF13372 Alginate export CCNA_00645 PF13379 NMT1-like family CCNA_00646 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_00647 PF00005 ABC transporter CCNA_00648 PF03861 ANTAR domain CCNA_00649 PF13379 NMT1-like family CCNA_00650 PF07690 Major Facilitator Superfamily CCNA_00651 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCNA_00651 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCNA_00651 PF04324 BFD-like [2Fe-2S] binding domain CCNA_00651 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_00652 PF00355 Rieske [2Fe-2S] domain CCNA_00653 PF00384 Molybdopterin oxidoreductase CCNA_00653 PF01568 Molydopterin dinucleotide binding domain CCNA_00653 PF04324 BFD-like [2Fe-2S] binding domain CCNA_00653 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCNA_00654 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCNA_00656 PF02384 N-6 DNA Methylase CCNA_00656 PF12161 HsdM N-terminal domain CCNA_00657 PF01420 Type I restriction modification DNA specificity domain CCNA_00658 PF04471 Restriction endonuclease CCNA_00659 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CCNA_00659 PF04851 Type III restriction enzyme, res subunit CCNA_00660 PF00665 Integrase core domain CCNA_00660 PF13565 CCNA_00660 CCNA_00661 PF01527 Transposase CCNA_00664 PF00375 Sodium:dicarboxylate symporter family CCNA_00665 PF07536 CCNA_00665 CCNA_00665 PF13185 GAF domain CCNA_00666 PF00072 Response regulator receiver domain CCNA_00667 PF04577 CCNA_00667 CCNA_00668 PF04577 CCNA_00668 CCNA_00669 PF05045 CCNA_00669 CCNA_00669 PF14307 CCNA_00669 CCNA_00670 PF00005 ABC transporter CCNA_00671 PF01061 CCNA_00671 CCNA_00673 PF12625 CCNA_00673 CCNA_00673 PF12833 Helix-turn-helix domain CCNA_00674 PF03486 HI0933-like protein CCNA_00675 PF01850 PIN domain CCNA_00676 PF07704 CCNA_00676 CCNA_00677 PF00687 Ribosomal protein L1p/L10e family CCNA_00678 PF00298 Ribosomal protein L11, RNA binding domain CCNA_00678 PF03946 Ribosomal protein L11, N-terminal domain CCNA_00679 PF01548 CCNA_00679 CCNA_00679 PF02371 CCNA_00679 CCNA_00680 PF01323 DSBA-like thioredoxin domain CCNA_00681 PF00106 short chain dehydrogenase CCNA_00682 PF01638 HxlR-like helix-turn-helix CCNA_00683 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CCNA_00684 PF12973 ChrR Cupin-like domain CCNA_00685 PF04542 Sigma-70 region 2 CCNA_00685 PF04545 Sigma-70, region 4 CCNA_00686 PF03572 Peptidase family S41 CCNA_00689 PF00072 Response regulator receiver domain CCNA_00689 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00689 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00689 PF08447 PAS fold CCNA_00690 PF02559 CarD-like/TRCF domain CCNA_00691 PF00037 4Fe-4S binding domain CCNA_00691 PF11953 Domain of unknown function (DUF3470) CCNA_00692 PF00563 EAL domain CCNA_00692 PF00990 GGDEF domain CCNA_00692 PF08447 PAS fold CCNA_00693 PF01479 S4 domain CCNA_00694 PF00271 Helicase conserved C-terminal domain CCNA_00695 PF07969 Amidohydrolase family CCNA_00696 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCNA_00699 PF00830 Ribosomal L28 family CCNA_00700 PF00593 TonB dependent receptor CCNA_00701 PF00313 'Cold-shock' DNA-binding domain CCNA_00707 PF13449 Esterase-like activity of phytase CCNA_00708 PF06213 CCNA_00708 CCNA_00708 PF11775 CCNA_00708 CCNA_00709 PF07043 CCNA_00709 CCNA_00710 PF11288 CCNA_00710 CCNA_00718 PF02517 CAAX protease self-immunity CCNA_00719 PF13437 HlyD family secretion protein CCNA_00719 PF13533 Biotin-lipoyl like CCNA_00720 PF00005 ABC transporter CCNA_00720 PF00664 ABC transporter transmembrane region CCNA_00720 PF03412 Peptidase C39 family CCNA_00721 PF00118 TCP-1/cpn60 chaperonin family CCNA_00722 PF00166 Chaperonin 10 Kd subunit CCNA_00724 PF14248 CCNA_00724 CCNA_00725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCNA_00725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCNA_00726 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_00726 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_00726 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_00727 PF13302 Acetyltransferase (GNAT) domain CCNA_00730 PF07739 TipAS antibiotic-recognition domain CCNA_00730 PF13411 MerR HTH family regulatory protein CCNA_00731 PF01119 DNA mismatch repair protein, C-terminal domain CCNA_00731 PF08676 MutL C terminal dimerisation domain CCNA_00731 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00732 PF01963 CCNA_00732 CCNA_00733 PF01963 CCNA_00733 CCNA_00734 PF01963 CCNA_00734 CCNA_00735 PF11233 CCNA_00735 CCNA_00736 PF01252 CCNA_00736 CCNA_00737 PF00133 tRNA synthetases class I (I, L, M and V) CCNA_00737 PF08264 Anticodon-binding domain of tRNA CCNA_00738 PF13180 PDZ domain CCNA_00738 PF13365 Trypsin-like peptidase domain CCNA_00740 PF01687 Riboflavin kinase CCNA_00740 PF06574 FAD synthetase CCNA_00741 PF01575 MaoC like domain CCNA_00742 PF13242 HAD-hyrolase-like CCNA_00742 PF13344 Haloacid dehalogenase-like hydrolase CCNA_00743 PF07298 CCNA_00743 CCNA_00744 PF01541 GIY-YIG catalytic domain CCNA_00745 PF09859 CCNA_00745 CCNA_00746 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCNA_00746 PF02805 Metal binding domain of Ada CCNA_00747 PF00563 EAL domain CCNA_00748 PF04023 FeoA domain CCNA_00749 PF02421 Ferrous iron transport protein B CCNA_00749 PF07664 CCNA_00749 CCNA_00749 PF07670 Nucleoside recognition CCNA_00750 PF12833 Helix-turn-helix domain CCNA_00750 PF14525 CCNA_00750 CCNA_00751 PF04235 CCNA_00751 CCNA_00752 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCNA_00752 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCNA_00753 PF04055 Radical SAM superfamily CCNA_00753 PF12544 Lysine-2,3-aminomutase CCNA_00753 PF13353 4Fe-4S single cluster domain CCNA_00754 PF01988 CCNA_00754 CCNA_00755 PF05099 Tellurite resistance protein TerB CCNA_00757 PF00152 tRNA synthetases class II (D, K and N) CCNA_00758 PF01132 Elongation factor P (EF-P) OB domain CCNA_00758 PF08207 Elongation factor P (EF-P) KOW-like domain CCNA_00758 PF09285 Elongation factor P, C-terminal CCNA_00759 PF00593 TonB dependent receptor CCNA_00759 PF07715 TonB-dependent Receptor Plug Domain CCNA_00760 PF00072 Response regulator receiver domain CCNA_00760 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00761 PF16277 CCNA_00761 CCNA_00763 PF00766 Electron transfer flavoprotein FAD-binding domain CCNA_00763 PF01012 Electron transfer flavoprotein domain CCNA_00764 PF01012 Electron transfer flavoprotein domain CCNA_00766 PF01923 Cobalamin adenosyltransferase CCNA_00767 PF04588 Hypoxia induced protein conserved region CCNA_00769 PF00440 Bacterial regulatory proteins, tetR family CCNA_00770 PF00440 Bacterial regulatory proteins, tetR family CCNA_00773 PF01546 Peptidase family M20/M25/M40 CCNA_00773 PF07687 Peptidase dimerisation domain CCNA_00774 PF00355 Rieske [2Fe-2S] domain CCNA_00775 PF00155 Aminotransferase class I and II CCNA_00776 PF13620 Carboxypeptidase regulatory-like domain CCNA_00777 PF00563 EAL domain CCNA_00777 PF00990 GGDEF domain CCNA_00777 PF08448 PAS fold CCNA_00778 PF00009 Elongation factor Tu GTP binding domain CCNA_00778 PF00679 Elongation factor G C-terminus CCNA_00778 PF03144 Elongation factor Tu domain 2 CCNA_00779 PF03544 Gram-negative bacterial TonB protein C-terminal CCNA_00780 PF05013 N-formylglutamate amidohydrolase CCNA_00781 PF00072 Response regulator receiver domain CCNA_00782 PF03806 CCNA_00782 CCNA_00783 PF00413 Matrixin CCNA_00783 PF08548 Peptidase M10 serralysin C terminal CCNA_00784 PF00691 OmpA family CCNA_00784 PF13505 Outer membrane protein beta-barrel domain CCNA_00785 PF01266 FAD dependent oxidoreductase CCNA_00785 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CCNA_00787 PF01618 CCNA_00787 CCNA_00788 PF07690 Major Facilitator Superfamily CCNA_00789 PF00027 Cyclic nucleotide-binding domain CCNA_00789 PF13545 Crp-like helix-turn-helix domain CCNA_00792 PF13439 Glycosyltransferase Family 4 CCNA_00792 PF13692 Glycosyl transferases group 1 CCNA_00793 PF13439 Glycosyltransferase Family 4 CCNA_00793 PF13692 Glycosyl transferases group 1 CCNA_00794 PF03739 CCNA_00794 CCNA_00795 PF00072 Response regulator receiver domain CCNA_00795 PF00196 Bacterial regulatory proteins, luxR family CCNA_00796 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00796 PF00989 PAS fold CCNA_00796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00798 PF00005 ABC transporter CCNA_00799 PF00005 ABC transporter CCNA_00799 PF00664 ABC transporter transmembrane region CCNA_00800 PF01654 CCNA_00800 CCNA_00801 PF02322 CCNA_00801 CCNA_00802 PF08173 CCNA_00802 CCNA_00803 PF01584 CheW-like domain CCNA_00804 PF12961 Domain of Unknown Function with PDB structure (DUF3850) CCNA_00805 PF01926 50S ribosome-binding GTPase CCNA_00806 PF02096 60Kd inner membrane protein CCNA_00806 PF14849 YidC periplasmic domain CCNA_00807 PF00825 Ribonuclease P CCNA_00808 PF00468 Ribosomal protein L34 CCNA_00809 PF00107 Zinc-binding dehydrogenase CCNA_00809 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_00810 PF07859 alpha/beta hydrolase fold CCNA_00811 PF00440 Bacterial regulatory proteins, tetR family CCNA_00812 PF09932 CCNA_00812 CCNA_00813 PF00743 Flavin-binding monooxygenase-like CCNA_00815 PF03055 Retinal pigment epithelial membrane protein CCNA_00817 PF07995 Glucose / Sorbosone dehydrogenase CCNA_00818 PF00043 Glutathione S-transferase, C-terminal domain CCNA_00818 PF02798 Glutathione S-transferase, N-terminal domain CCNA_00820 PF00108 Thiolase, N-terminal domain CCNA_00820 PF02803 Thiolase, C-terminal domain CCNA_00823 PF00196 Bacterial regulatory proteins, luxR family CCNA_00824 PF00392 Bacterial regulatory proteins, gntR family CCNA_00824 PF07729 FCD domain CCNA_00825 PF01081 KDPG and KHG aldolase CCNA_00826 PF05035 2-keto-3-deoxy-galactonokinase CCNA_00827 PF00593 TonB dependent receptor CCNA_00827 PF07715 TonB-dependent Receptor Plug Domain CCNA_00828 PF04820 Tryptophan halogenase CCNA_00830 PF02449 Beta-galactosidase CCNA_00831 PF01055 Glycosyl hydrolases family 31 CCNA_00831 PF07691 PA14 domain CCNA_00831 PF16338 CCNA_00831 CCNA_00831 PF17137 CCNA_00831 CCNA_00832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_00832 PF03466 LysR substrate binding domain CCNA_00833 PF03358 NADPH-dependent FMN reductase CCNA_00834 PF00669 Bacterial flagellin N-terminal helical region CCNA_00834 PF00700 Bacterial flagellin C-terminal helical region CCNA_00835 PF00669 Bacterial flagellin N-terminal helical region CCNA_00835 PF00700 Bacterial flagellin C-terminal helical region CCNA_00836 PF00669 Bacterial flagellin N-terminal helical region CCNA_00836 PF00700 Bacterial flagellin C-terminal helical region CCNA_00837 PF01120 Alpha-L-fucosidase CCNA_00838 PF10566 Glycoside hydrolase 97 CCNA_00838 PF14508 Glycosyl-hydrolase 97 N-terminal CCNA_00838 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CCNA_00839 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_00839 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_00840 PF03629 Domain of unknown function (DUF303) CCNA_00841 PF00135 Carboxylesterase family CCNA_00844 PF05016 Plasmid stabilisation system protein CCNA_00846 PF00171 Aldehyde dehydrogenase family CCNA_00846 PF01619 Proline dehydrogenase CCNA_00846 PF14850 DNA-binding domain of Proline dehydrogenase CCNA_00847 PF01037 AsnC family CCNA_00847 PF13412 Winged helix-turn-helix DNA-binding CCNA_00849 PF02321 Outer membrane efflux protein CCNA_00850 PF00873 AcrB/AcrD/AcrF family CCNA_00851 PF16576 CCNA_00851 CCNA_00852 PF00440 Bacterial regulatory proteins, tetR family CCNA_00853 PF03641 Possible lysine decarboxylase CCNA_00854 PF00753 Metallo-beta-lactamase superfamily CCNA_00854 PF07521 RNA-metabolising metallo-beta-lactamase CCNA_00854 PF10996 Beta-Casp domain CCNA_00855 PF13472 GDSL-like Lipase/Acylhydrolase family CCNA_00856 PF04616 Glycosyl hydrolases family 43 CCNA_00857 PF00083 Sugar (and other) transporter CCNA_00858 PF07715 TonB-dependent Receptor Plug Domain CCNA_00858 PF14905 Outer membrane protein beta-barrel family CCNA_00859 PF00583 Acetyltransferase (GNAT) family CCNA_00862 PF00920 Dehydratase family CCNA_00863 PF08450 SMP-30/Gluconolaconase/LRE-like region CCNA_00864 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_00865 PF00171 Aldehyde dehydrogenase family CCNA_00869 PF02384 N-6 DNA Methylase CCNA_00870 PF06676 CCNA_00870 CCNA_00871 PF00795 Carbon-nitrogen hydrolase CCNA_00872 PF00462 Glutaredoxin CCNA_00873 PF00156 Phosphoribosyl transferase domain CCNA_00874 PF08241 Methyltransferase domain CCNA_00875 PF04964 CCNA_00875 CCNA_00876 PF00293 NUDIX domain CCNA_00878 PF00270 DEAD/DEAH box helicase CCNA_00878 PF00271 Helicase conserved C-terminal domain CCNA_00879 PF07536 CCNA_00879 CCNA_00879 PF08447 PAS fold CCNA_00881 PF00005 ABC transporter CCNA_00882 PF05433 CCNA_00882 CCNA_00883 PF08241 Methyltransferase domain CCNA_00884 PF01850 PIN domain CCNA_00886 PF00696 Amino acid kinase family CCNA_00886 PF01842 ACT domain CCNA_00886 PF13840 ACT domain CCNA_00888 PF13682 Chemoreceptor zinc-binding domain CCNA_00889 PF12893 Putative lumazine-binding CCNA_00890 PF10503 Esterase PHB depolymerase CCNA_00891 PF00892 EamA-like transporter family CCNA_00892 PF00391 PEP-utilising enzyme, mobile domain CCNA_00892 PF02896 PEP-utilising enzyme, TIM barrel domain CCNA_00892 PF05524 PEP-utilising enzyme, N-terminal CCNA_00892 PF13185 GAF domain CCNA_00893 PF13413 Helix-turn-helix domain CCNA_00894 PF04551 GcpE protein CCNA_00898 PF00849 RNA pseudouridylate synthase CCNA_00898 PF01479 S4 domain CCNA_00899 PF00472 RF-1 domain CCNA_00899 PF03462 PCRF domain CCNA_00900 PF00563 EAL domain CCNA_00900 PF00990 GGDEF domain CCNA_00900 PF05228 CCNA_00900 CCNA_00901 PF12146 Putative lysophospholipase CCNA_00902 PF13407 Periplasmic binding protein domain CCNA_00903 PF00005 ABC transporter CCNA_00904 PF02653 CCNA_00904 CCNA_00905 PF03372 Endonuclease/Exonuclease/phosphatase family CCNA_00908 PF00109 Beta-ketoacyl synthase, N-terminal domain CCNA_00908 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCNA_00910 PF05139 Erythromycin esterase CCNA_00911 PF13521 AAA domain CCNA_00912 PF00144 Beta-lactamase CCNA_00914 PF00583 Acetyltransferase (GNAT) family CCNA_00915 PF03473 MOSC domain CCNA_00915 PF03476 MOSC N-terminal beta barrel domain CCNA_00916 PF05016 Plasmid stabilisation system protein CCNA_00917 PF03693 Uncharacterised protein family (UPF0156) CCNA_00918 PF13847 Methyltransferase domain CCNA_00920 PF13763 CCNA_00920 CCNA_00921 PF01435 Peptidase family M48 CCNA_00922 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_00922 PF02861 Clp amino terminal domain CCNA_00922 PF07724 AAA domain (Cdc48 subfamily) CCNA_00922 PF10431 C-terminal, D2-small domain, of ClpB protein CCNA_00924 PF13601 Winged helix DNA-binding domain CCNA_00926 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal CCNA_00928 PF00392 Bacterial regulatory proteins, gntR family CCNA_00928 PF07729 FCD domain CCNA_00929 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCNA_00929 PF01872 RibD C-terminal domain CCNA_00930 PF00677 Lumazine binding domain CCNA_00931 PF00925 GTP cyclohydrolase II CCNA_00931 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CCNA_00932 PF00885 6,7-dimethyl-8-ribityllumazine synthase CCNA_00933 PF04389 Peptidase family M28 CCNA_00934 PF14534 Domain of unknown function (DUF4440) CCNA_00935 PF12833 Helix-turn-helix domain CCNA_00936 PF10067 CCNA_00936 CCNA_00937 PF14542 GCN5-related N-acetyl-transferase CCNA_00938 PF00108 Thiolase, N-terminal domain CCNA_00938 PF02803 Thiolase, C-terminal domain CCNA_00939 PF01638 HxlR-like helix-turn-helix CCNA_00940 PF00563 EAL domain CCNA_00940 PF00990 GGDEF domain CCNA_00941 PF03054 tRNA methyl transferase CCNA_00942 PF00669 Bacterial flagellin N-terminal helical region CCNA_00942 PF00700 Bacterial flagellin C-terminal helical region CCNA_00943 PF00460 Flagella basal body rod protein CCNA_00943 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_00945 PF02120 Flagellar hook-length control protein FliK CCNA_00946 PF03963 CCNA_00946 CCNA_00946 PF13860 FlgD Ig-like domain CCNA_00947 PF00460 Flagella basal body rod protein CCNA_00947 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_00947 PF07559 Flagellar basal body protein FlaE CCNA_00948 PF06627 Protein of unknown function (DUF1153) CCNA_00950 PF01514 Secretory protein of YscJ/FliF family CCNA_00950 PF08345 CCNA_00950 CCNA_00951 PF01706 FliG C-terminal domain CCNA_00951 PF14841 FliG middle domain CCNA_00951 PF14842 FliG N-terminal domain CCNA_00953 PF01052 Surface presentation of antigens (SPOA) CCNA_00954 PF00158 Sigma-54 interaction domain CCNA_00954 PF02954 Bacterial regulatory protein, Fis family CCNA_00956 PF00771 FHIPEP family CCNA_00957 PF07396 Phosphate-selective porin O and P CCNA_00958 PF09995 CCNA_00958 CCNA_00959 PF00440 Bacterial regulatory proteins, tetR family CCNA_00961 PF14110 CCNA_00961 CCNA_00962 PF01047 MarR family CCNA_00963 PF02566 OsmC-like protein CCNA_00965 PF00226 DnaJ domain CCNA_00966 PF01243 Pyridoxamine 5'-phosphate oxidase CCNA_00966 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CCNA_00967 PF00440 Bacterial regulatory proteins, tetR family CCNA_00967 PF14246 AefR-like transcriptional repressor, C-terminal region CCNA_00968 PF01636 Phosphotransferase enzyme family CCNA_00968 PF13671 AAA domain CCNA_00969 PF00072 Response regulator receiver domain CCNA_00969 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00970 PF00501 AMP-binding enzyme CCNA_00970 PF07386 CCNA_00970 CCNA_00970 PF13193 AMP-binding enzyme C-terminal domain CCNA_00971 PF00753 Metallo-beta-lactamase superfamily CCNA_00973 PF04273 Putative phosphatase (DUF442) CCNA_00974 PF13620 Carboxypeptidase regulatory-like domain CCNA_00976 PF01343 Peptidase family S49 CCNA_00977 PF13340 CCNA_00977 CCNA_00978 PF13586 CCNA_00978 CCNA_00979 PF16576 CCNA_00979 CCNA_00980 PF02687 CCNA_00980 CCNA_00980 PF12704 MacB-like periplasmic core domain CCNA_00981 PF00005 ABC transporter CCNA_00982 PF05443 ROS/MUCR transcriptional regulator protein CCNA_00983 PF00072 Response regulator receiver domain CCNA_00983 PF00512 His Kinase A (phospho-acceptor) domain CCNA_00983 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_00984 PF13420 Acetyltransferase (GNAT) domain CCNA_00985 PF00326 Prolyl oligopeptidase family CCNA_00985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCNA_00986 PF13365 Trypsin-like peptidase domain CCNA_00987 PF05532 CsbD-like CCNA_00988 PF00266 Aminotransferase class-V CCNA_00989 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCNA_00989 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CCNA_00990 PF02566 OsmC-like protein CCNA_00991 PF01575 MaoC like domain CCNA_00992 PF12281 CCNA_00992 CCNA_00993 PF00501 AMP-binding enzyme CCNA_00993 PF13193 AMP-binding enzyme C-terminal domain CCNA_00994 PF00732 GMC oxidoreductase CCNA_00994 PF05199 GMC oxidoreductase CCNA_00995 PF00067 Cytochrome P450 CCNA_00996 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_00997 PF10098 CCNA_00997 CCNA_00998 PF05443 ROS/MUCR transcriptional regulator protein CCNA_00999 PF07310 CCNA_00999 CCNA_01001 PF00294 pfkB family carbohydrate kinase CCNA_01002 PF00813 CCNA_01002 CCNA_01003 PF04347 CCNA_01003 CCNA_01005 PF00460 Flagella basal body rod protein CCNA_01005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_01006 PF02049 CCNA_01006 CCNA_01008 PF01175 Urocanase CCNA_01009 PF05013 N-formylglutamate amidohydrolase CCNA_01010 PF00221 Aromatic amino acid lyase CCNA_01011 PF01979 Amidohydrolase family CCNA_01012 PF01979 Amidohydrolase family CCNA_01013 PF00392 Bacterial regulatory proteins, gntR family CCNA_01013 PF07702 UTRA domain CCNA_01014 PF04073 Aminoacyl-tRNA editing domain CCNA_01015 PF00394 Multicopper oxidase CCNA_01015 PF07731 Multicopper oxidase CCNA_01015 PF07732 Multicopper oxidase CCNA_01016 PF05275 CCNA_01016 CCNA_01017 PF00501 AMP-binding enzyme CCNA_01017 PF13193 AMP-binding enzyme C-terminal domain CCNA_01018 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCNA_01019 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_01019 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_01019 PF14310 Fibronectin type III-like domain CCNA_01020 PF00356 Bacterial regulatory proteins, lacI family CCNA_01020 PF13377 Periplasmic binding protein-like domain CCNA_01021 PF00593 TonB dependent receptor CCNA_01021 PF07715 TonB-dependent Receptor Plug Domain CCNA_01022 PF04820 Tryptophan halogenase CCNA_01023 PF04820 Tryptophan halogenase CCNA_01028 PF00883 Cytosol aminopeptidase family, catalytic domain CCNA_01028 PF02789 Cytosol aminopeptidase family, N-terminal domain CCNA_01029 PF05592 Bacterial alpha-L-rhamnosidase CCNA_01029 PF08531 Alpha-L-rhamnosidase N-terminal domain CCNA_01030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCNA_01031 PF00083 Sugar (and other) transporter CCNA_01031 PF07690 Major Facilitator Superfamily CCNA_01032 PF04542 Sigma-70 region 2 CCNA_01032 PF08281 Sigma-70, region 4 CCNA_01033 PF04773 FecR protein CCNA_01033 PF16220 CCNA_01033 CCNA_01034 PF00593 TonB dependent receptor CCNA_01034 PF07715 TonB-dependent Receptor Plug Domain CCNA_01035 PF01019 Gamma-glutamyltranspeptidase CCNA_01036 PF00246 Zinc carboxypeptidase CCNA_01037 PF00392 Bacterial regulatory proteins, gntR family CCNA_01037 PF07729 FCD domain CCNA_01038 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_01039 PF07690 Major Facilitator Superfamily CCNA_01040 PF04616 Glycosyl hydrolases family 43 CCNA_01042 PF07715 TonB-dependent Receptor Plug Domain CCNA_01044 PF00440 Bacterial regulatory proteins, tetR family CCNA_01045 PF04237 YjbR CCNA_01046 PF01625 Peptide methionine sulfoxide reductase CCNA_01047 PF00593 TonB dependent receptor CCNA_01047 PF07715 TonB-dependent Receptor Plug Domain CCNA_01050 PF00005 ABC transporter CCNA_01050 PF12848 ABC transporter CCNA_01051 PF00593 TonB dependent receptor CCNA_01051 PF07715 TonB-dependent Receptor Plug Domain CCNA_01052 PF07277 CCNA_01052 CCNA_01053 PF13621 Cupin-like domain CCNA_01054 PF04820 Tryptophan halogenase CCNA_01055 PF00534 Glycosyl transferases group 1 CCNA_01056 PF05050 Methyltransferase FkbM domain CCNA_01058 PF12844 Helix-turn-helix domain CCNA_01059 PF00353 Hemolysin-type calcium-binding repeat (2 copies) CCNA_01060 PF00005 ABC transporter CCNA_01060 PF00664 ABC transporter transmembrane region CCNA_01061 PF13437 HlyD family secretion protein CCNA_01061 PF13533 Biotin-lipoyl like CCNA_01062 PF16363 CCNA_01062 CCNA_01063 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_01064 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCNA_01065 PF00534 Glycosyl transferases group 1 CCNA_01066 PF00534 Glycosyl transferases group 1 CCNA_01067 PF02321 Outer membrane efflux protein CCNA_01068 PF00534 Glycosyl transferases group 1 CCNA_01069 PF08241 Methyltransferase domain CCNA_01069 PF10119 CCNA_01069 CCNA_01070 PF04654 CCNA_01070 CCNA_01071 PF00083 Sugar (and other) transporter CCNA_01072 PF11752 CCNA_01072 CCNA_01073 PF06170 CCNA_01073 CCNA_01074 PF08085 CCNA_01074 CCNA_01075 PF00030 Beta/Gamma crystallin CCNA_01076 PF00030 Beta/Gamma crystallin CCNA_01077 PF01804 Penicillin amidase CCNA_01081 PF13020 CCNA_01081 CCNA_01083 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01085 PF00145 C-5 cytosine-specific DNA methylase CCNA_01086 PF00009 Elongation factor Tu GTP binding domain CCNA_01086 PF00679 Elongation factor G C-terminus CCNA_01086 PF03144 Elongation factor Tu domain 2 CCNA_01086 PF06421 GTP-binding protein LepA C-terminus CCNA_01087 PF06577 CCNA_01087 CCNA_01088 PF03350 CCNA_01088 CCNA_01090 PF13598 CCNA_01090 CCNA_01091 PF01625 Peptide methionine sulfoxide reductase CCNA_01095 PF01588 Putative tRNA binding domain CCNA_01095 PF03147 Ferredoxin-fold anticodon binding domain CCNA_01095 PF03483 B3/4 domain CCNA_01095 PF03484 tRNA synthetase B5 domain CCNA_01096 PF01409 tRNA synthetases class II core domain (F) CCNA_01096 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CCNA_01097 PF00453 Ribosomal protein L20 CCNA_01098 PF01632 Ribosomal protein L35 CCNA_01099 PF07690 Major Facilitator Superfamily CCNA_01100 PF00326 Prolyl oligopeptidase family CCNA_01101 PF00707 Translation initiation factor IF-3, C-terminal domain CCNA_01101 PF05198 Translation initiation factor IF-3, N-terminal domain CCNA_01102 PF02588 CCNA_01102 CCNA_01103 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCNA_01104 PF00534 Glycosyl transferases group 1 CCNA_01104 PF13439 Glycosyltransferase Family 4 CCNA_01105 PF00561 alpha/beta hydrolase fold CCNA_01106 PF01402 Ribbon-helix-helix protein, copG family CCNA_01107 PF05016 Plasmid stabilisation system protein CCNA_01108 PF13460 NADH(P)-binding CCNA_01109 PF05960 Bacterial protein of unknown function (DUF885) CCNA_01110 PF00294 pfkB family carbohydrate kinase CCNA_01111 PF08299 Bacterial dnaA protein helix-turn-helix CCNA_01113 PF00581 Rhodanese-like domain CCNA_01114 PF02657 Fe-S metabolism associated domain CCNA_01115 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01116 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01118 PF07372 Protein of unknown function (DUF1491) CCNA_01121 PF07607 CCNA_01121 CCNA_01123 PF00009 Elongation factor Tu GTP binding domain CCNA_01123 PF16658 CCNA_01123 CCNA_01124 PF00155 Aminotransferase class I and II CCNA_01129 PF01313 CCNA_01129 CCNA_01130 PF01311 CCNA_01130 CCNA_01131 PF01312 FlhB HrpN YscU SpaS Family CCNA_01132 PF00072 Response regulator receiver domain CCNA_01132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01133 PF13858 CCNA_01133 CCNA_01134 PF00196 Bacterial regulatory proteins, luxR family CCNA_01136 PF06439 Domain of Unknown Function (DUF1080) CCNA_01137 PF13302 Acetyltransferase (GNAT) domain CCNA_01138 PF14534 Domain of unknown function (DUF4440) CCNA_01139 PF05960 Bacterial protein of unknown function (DUF885) CCNA_01140 PF00563 EAL domain CCNA_01141 PF00154 recA bacterial DNA recombination protein CCNA_01143 PF01042 Endoribonuclease L-PSP CCNA_01144 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_01145 PF01593 Flavin containing amine oxidoreductase CCNA_01147 PF00583 Acetyltransferase (GNAT) family CCNA_01149 PF00593 TonB dependent receptor CCNA_01149 PF07715 TonB-dependent Receptor Plug Domain CCNA_01151 PF13280 CCNA_01151 CCNA_01152 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CCNA_01153 PF02417 CCNA_01153 CCNA_01155 PF00593 TonB dependent receptor CCNA_01155 PF07715 TonB-dependent Receptor Plug Domain CCNA_01157 PF01593 Flavin containing amine oxidoreductase CCNA_01159 PF07690 Major Facilitator Superfamily CCNA_01161 PF00375 Sodium:dicarboxylate symporter family CCNA_01162 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_01162 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_01162 PF14310 Fibronectin type III-like domain CCNA_01164 PF13844 Glycosyl transferase family 41 CCNA_01165 PF05050 Methyltransferase FkbM domain CCNA_01166 PF13452 N-terminal half of MaoC dehydratase CCNA_01167 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01167 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01167 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01168 PF00108 Thiolase, N-terminal domain CCNA_01168 PF02803 Thiolase, C-terminal domain CCNA_01170 PF00593 TonB dependent receptor CCNA_01170 PF07715 TonB-dependent Receptor Plug Domain CCNA_01171 PF01627 Hpt domain CCNA_01172 PF01987 Mitochondrial biogenesis AIM24 CCNA_01173 PF01817 Chorismate mutase type II CCNA_01174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_01174 PF03466 LysR substrate binding domain CCNA_01175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCNA_01176 PF11011 CCNA_01176 CCNA_01177 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCNA_01177 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCNA_01178 PF06073 CCNA_01178 CCNA_01179 PF01507 Phosphoadenosine phosphosulfate reductase family CCNA_01180 PF01804 Penicillin amidase CCNA_01181 PF06725 3D domain CCNA_01182 PF00043 Glutathione S-transferase, C-terminal domain CCNA_01182 PF02798 Glutathione S-transferase, N-terminal domain CCNA_01184 PF00293 NUDIX domain CCNA_01187 PF04542 Sigma-70 region 2 CCNA_01187 PF08281 Sigma-70, region 4 CCNA_01188 PF04773 FecR protein CCNA_01189 PF00593 TonB dependent receptor CCNA_01189 PF07660 Secretin and TonB N terminus short domain CCNA_01189 PF07715 TonB-dependent Receptor Plug Domain CCNA_01191 PF07690 Major Facilitator Superfamily CCNA_01192 PF00480 ROK family CCNA_01193 PF00128 Alpha amylase, catalytic domain CCNA_01193 PF16657 CCNA_01193 CCNA_01194 PF00593 TonB dependent receptor CCNA_01194 PF07715 TonB-dependent Receptor Plug Domain CCNA_01195 PF00356 Bacterial regulatory proteins, lacI family CCNA_01195 PF13377 Periplasmic binding protein-like domain CCNA_01196 PF00593 TonB dependent receptor CCNA_01196 PF07715 TonB-dependent Receptor Plug Domain CCNA_01197 PF10013 CCNA_01197 CCNA_01198 PF04321 RmlD substrate binding domain CCNA_01199 PF00483 Nucleotidyl transferase CCNA_01200 PF07715 TonB-dependent Receptor Plug Domain CCNA_01200 PF14905 Outer membrane protein beta-barrel family CCNA_01203 PF00593 TonB dependent receptor CCNA_01203 PF07715 TonB-dependent Receptor Plug Domain CCNA_01204 PF16363 CCNA_01204 CCNA_01205 PF00005 ABC transporter CCNA_01206 PF01061 CCNA_01206 CCNA_01207 PF07730 Histidine kinase CCNA_01208 PF00072 Response regulator receiver domain CCNA_01208 PF00196 Bacterial regulatory proteins, luxR family CCNA_01209 PF01070 FMN-dependent dehydrogenase CCNA_01210 PF12804 MobA-like NTP transferase domain CCNA_01211 PF12804 MobA-like NTP transferase domain CCNA_01213 PF03739 CCNA_01213 CCNA_01214 PF03739 CCNA_01214 CCNA_01216 PF00149 Calcineurin-like phosphoesterase CCNA_01217 PF01066 CDP-alcohol phosphatidyltransferase CCNA_01218 PF00781 Diacylglycerol kinase catalytic domain CCNA_01220 PF00155 Aminotransferase class I and II CCNA_01221 PF00550 Phosphopantetheine attachment site CCNA_01222 PF13460 NADH(P)-binding CCNA_01223 PF00501 AMP-binding enzyme CCNA_01226 PF06835 Lipopolysaccharide-assembly, LptC-related CCNA_01227 PF00296 Luciferase-like monooxygenase CCNA_01228 PF00857 Isochorismatase family CCNA_01229 PF01323 DSBA-like thioredoxin domain CCNA_01230 PF00884 Sulfatase CCNA_01231 PF03781 Sulfatase-modifying factor enzyme 1 CCNA_01232 PF07045 Protein of unknown function (DUF1330) CCNA_01233 PF00561 alpha/beta hydrolase fold CCNA_01234 PF00753 Metallo-beta-lactamase superfamily CCNA_01236 PF10685 CCNA_01236 CCNA_01238 PF13202 EF hand CCNA_01239 PF00672 HAMP domain CCNA_01239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01240 PF00072 Response regulator receiver domain CCNA_01240 PF00486 Transcriptional regulatory protein, C terminal CCNA_01241 PF00753 Metallo-beta-lactamase superfamily CCNA_01242 PF13520 Amino acid permease CCNA_01243 PF00270 DEAD/DEAH box helicase CCNA_01243 PF00271 Helicase conserved C-terminal domain CCNA_01243 PF04408 Helicase associated domain (HA2) CCNA_01243 PF08482 CCNA_01243 CCNA_01244 PF15586 CCNA_01244 CCNA_01245 PF00588 SpoU rRNA Methylase family CCNA_01245 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCNA_01246 PF10672 S-adenosylmethionine-dependent methyltransferase CCNA_01247 PF13641 Glycosyltransferase like family 2 CCNA_01248 PF00440 Bacterial regulatory proteins, tetR family CCNA_01248 PF13305 WHG domain CCNA_01249 PF01497 Periplasmic binding protein CCNA_01250 PF01032 FecCD transport family CCNA_01251 PF00005 ABC transporter CCNA_01252 PF01464 Transglycosylase SLT domain CCNA_01253 PF00701 Dihydrodipicolinate synthetase family CCNA_01254 PF01668 SmpB protein CCNA_01256 PF11199 CCNA_01256 CCNA_01257 PF06166 CCNA_01257 CCNA_01258 PF06149 CCNA_01258 CCNA_01259 PF00596 Class II Aldolase and Adducin N-terminal domain CCNA_01261 PF16576 CCNA_01261 CCNA_01262 PF00873 AcrB/AcrD/AcrF family CCNA_01263 PF00456 Transketolase, thiamine diphosphate binding domain CCNA_01264 PF13586 CCNA_01264 CCNA_01266 PF12680 SnoaL-like domain CCNA_01267 PF12680 SnoaL-like domain CCNA_01268 PF00034 Cytochrome c CCNA_01269 PF07750 CCNA_01269 CCNA_01271 PF01047 MarR family CCNA_01272 PF00472 RF-1 domain CCNA_01273 PF02639 CCNA_01273 CCNA_01274 PF00171 Aldehyde dehydrogenase family CCNA_01275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CCNA_01275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CCNA_01276 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_01277 PF01565 FAD binding domain CCNA_01277 PF04030 D-arabinono-1,4-lactone oxidase CCNA_01279 PF01513 ATP-NAD kinase CCNA_01280 PF10098 CCNA_01280 CCNA_01281 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CCNA_01281 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CCNA_01282 PF08450 SMP-30/Gluconolaconase/LRE-like region CCNA_01283 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCNA_01283 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCNA_01284 PF07859 alpha/beta hydrolase fold CCNA_01285 PF00561 alpha/beta hydrolase fold CCNA_01287 PF00561 alpha/beta hydrolase fold CCNA_01288 PF07690 Major Facilitator Superfamily CCNA_01289 PF04241 CCNA_01289 CCNA_01291 PF01636 Phosphotransferase enzyme family CCNA_01294 PF13586 CCNA_01294 CCNA_01295 PF03741 CCNA_01295 CCNA_01297 PF00588 SpoU rRNA Methylase family CCNA_01297 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCNA_01298 PF00009 Elongation factor Tu GTP binding domain CCNA_01298 PF03143 Elongation factor Tu C-terminal domain CCNA_01298 PF03144 Elongation factor Tu domain 2 CCNA_01299 PF13376 CCNA_01299 CCNA_01300 PF02634 FdhD/NarQ family CCNA_01301 PF00384 Molybdopterin oxidoreductase CCNA_01301 PF01568 Molydopterin dinucleotide binding domain CCNA_01302 PF13480 Acetyltransferase (GNAT) domain CCNA_01305 PF00338 Ribosomal protein S10p/S20e CCNA_01306 PF00297 Ribosomal protein L3 CCNA_01307 PF00573 Ribosomal protein L4/L1 family CCNA_01308 PF00276 Ribosomal protein L23 CCNA_01309 PF00181 Ribosomal Proteins L2, RNA binding domain CCNA_01309 PF03947 Ribosomal Proteins L2, C-terminal domain CCNA_01310 PF00203 Ribosomal protein S19 CCNA_01311 PF00237 Ribosomal protein L22p/L17e CCNA_01312 PF00189 Ribosomal protein S3, C-terminal domain CCNA_01312 PF07650 KH domain CCNA_01313 PF00252 Ribosomal protein L16p/L10e CCNA_01314 PF00831 Ribosomal L29 protein CCNA_01315 PF00366 Ribosomal protein S17 CCNA_01316 PF00238 Ribosomal protein L14p/L23e CCNA_01317 PF00467 KOW motif CCNA_01317 PF17136 CCNA_01317 CCNA_01318 PF00281 Ribosomal protein L5 CCNA_01318 PF00673 ribosomal L5P family C-terminus CCNA_01319 PF00253 Ribosomal protein S14p/S29e CCNA_01320 PF00410 Ribosomal protein S8 CCNA_01321 PF00347 Ribosomal protein L6 CCNA_01322 PF00861 Ribosomal L18p/L5e family CCNA_01323 PF00333 Ribosomal protein S5, N-terminal domain CCNA_01323 PF03719 Ribosomal protein S5, C-terminal domain CCNA_01324 PF00327 Ribosomal protein L30p/L7e CCNA_01325 PF00828 Ribosomal protein L18e/L15 CCNA_01326 PF00344 SecY translocase CCNA_01327 PF00406 Adenylate kinase CCNA_01328 PF00416 Ribosomal protein S13/S18 CCNA_01329 PF00411 Ribosomal protein S11 CCNA_01330 PF01000 RNA polymerase Rpb3/RpoA insert domain CCNA_01330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CCNA_01330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CCNA_01332 PF01196 Ribosomal protein L17 CCNA_01335 PF00005 ABC transporter CCNA_01336 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CCNA_01337 PF00732 GMC oxidoreductase CCNA_01337 PF05199 GMC oxidoreductase CCNA_01338 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_01339 PF01022 Bacterial regulatory protein, arsR family CCNA_01340 PF07690 Major Facilitator Superfamily CCNA_01341 PF13180 PDZ domain CCNA_01341 PF13365 Trypsin-like peptidase domain CCNA_01342 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_01342 PF12002 MgsA AAA+ ATPase C terminal CCNA_01342 PF16193 CCNA_01342 CCNA_01343 PF00849 RNA pseudouridylate synthase CCNA_01345 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01346 PF03922 OmpW family CCNA_01347 PF10677 CCNA_01347 CCNA_01349 PF13340 CCNA_01349 CCNA_01350 PF13586 CCNA_01350 CCNA_01351 PF00072 Response regulator receiver domain CCNA_01351 PF00486 Transcriptional regulatory protein, C terminal CCNA_01352 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01352 PF00672 HAMP domain CCNA_01352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01353 PF02333 Phytase CCNA_01354 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCNA_01354 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCNA_01355 PF01380 SIS domain CCNA_01355 PF01418 Helix-turn-helix domain, rpiR family CCNA_01356 PF00294 pfkB family carbohydrate kinase CCNA_01356 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) CCNA_01357 PF00205 Thiamine pyrophosphate enzyme, central domain CCNA_01357 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCNA_01357 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCNA_01358 PF01261 Xylose isomerase-like TIM barrel CCNA_01359 PF04962 KduI/IolB family CCNA_01360 PF00171 Aldehyde dehydrogenase family CCNA_01361 PF03413 Peptidase propeptide and YPEB domain CCNA_01362 PF00072 Response regulator receiver domain CCNA_01362 PF00486 Transcriptional regulatory protein, C terminal CCNA_01363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01364 PF01207 Dihydrouridine synthase (Dus) CCNA_01365 PF13975 CCNA_01365 CCNA_01366 PF06945 CCNA_01366 CCNA_01367 PF02277 Phosphoribosyltransferase CCNA_01368 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01368 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01368 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01369 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01369 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01369 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01372 PF03641 Possible lysine decarboxylase CCNA_01374 PF00005 ABC transporter CCNA_01374 PF00664 ABC transporter transmembrane region CCNA_01375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_01376 PF00043 Glutathione S-transferase, C-terminal domain CCNA_01376 PF02798 Glutathione S-transferase, N-terminal domain CCNA_01379 PF02321 Outer membrane efflux protein CCNA_01380 PF10691 CCNA_01380 CCNA_01381 PF00133 tRNA synthetases class I (I, L, M and V) CCNA_01381 PF08264 Anticodon-binding domain of tRNA CCNA_01381 PF10458 Valyl tRNA synthetase tRNA binding arm CCNA_01382 PF00501 AMP-binding enzyme CCNA_01382 PF13193 AMP-binding enzyme C-terminal domain CCNA_01383 PF08818 Domain of unknown function (DU1801) CCNA_01384 PF01425 Amidase CCNA_01385 PF01479 S4 domain CCNA_01385 PF01728 FtsJ-like methyltransferase CCNA_01387 PF05958 tRNA (Uracil-5-)-methyltransferase CCNA_01388 PF13649 Methyltransferase domain CCNA_01389 PF01757 CCNA_01389 CCNA_01390 PF03795 YCII-related domain CCNA_01390 PF04542 Sigma-70 region 2 CCNA_01390 PF08281 Sigma-70, region 4 CCNA_01391 PF04055 Radical SAM superfamily CCNA_01393 PF01464 Transglycosylase SLT domain CCNA_01394 PF03167 Uracil DNA glycosylase superfamily CCNA_01395 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CCNA_01395 PF13450 NAD(P)-binding Rossmann-like domain CCNA_01396 PF13414 TPR repeat CCNA_01396 PF13432 Tetratricopeptide repeat CCNA_01397 PF00288 GHMP kinases N terminal domain CCNA_01397 PF08544 GHMP kinases C terminal CCNA_01398 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCNA_01399 PF00909 Ammonium Transporter Family CCNA_01400 PF00543 Nitrogen regulatory protein P-II CCNA_01403 PF02091 Glycyl-tRNA synthetase alpha subunit CCNA_01404 PF02092 CCNA_01404 CCNA_01405 PF01541 GIY-YIG catalytic domain CCNA_01406 PF10118 CCNA_01406 CCNA_01407 PF00440 Bacterial regulatory proteins, tetR family CCNA_01408 PF00293 NUDIX domain CCNA_01409 PF00490 Delta-aminolevulinic acid dehydratase CCNA_01410 PF00743 Flavin-binding monooxygenase-like CCNA_01410 PF13450 NAD(P)-binding Rossmann-like domain CCNA_01412 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01412 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01412 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01413 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_01414 PF16113 CCNA_01414 CCNA_01416 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCNA_01416 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCNA_01417 PF00155 Aminotransferase class I and II CCNA_01418 PF05443 ROS/MUCR transcriptional regulator protein CCNA_01419 PF00464 Serine hydroxymethyltransferase CCNA_01420 PF03477 ATP cone domain CCNA_01421 PF00885 6,7-dimethyl-8-ribityllumazine synthase CCNA_01422 PF01029 NusB family CCNA_01423 PF00586 AIR synthase related protein, N-terminal domain CCNA_01423 PF02769 AIR synthase related protein, C-terminal domain CCNA_01425 PF03030 Inorganic H+ pyrophosphatase CCNA_01426 PF00072 Response regulator receiver domain CCNA_01427 PF04355 SmpA / OmlA family CCNA_01429 PF03981 CCNA_01429 CCNA_01430 PF02620 CCNA_01430 CCNA_01431 PF02504 Fatty acid synthesis protein CCNA_01432 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCNA_01432 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCNA_01433 PF00216 Bacterial DNA-binding protein CCNA_01434 PF13411 MerR HTH family regulatory protein CCNA_01435 PF11003 CCNA_01435 CCNA_01437 PF04226 CCNA_01437 CCNA_01438 PF02628 CCNA_01438 CCNA_01439 PF05787 Bacterial protein of unknown function (DUF839) CCNA_01440 PF00572 Ribosomal protein L13 CCNA_01441 PF00380 Ribosomal protein S9/S16 CCNA_01442 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCNA_01443 PF06940 CCNA_01443 CCNA_01444 PF07167 CCNA_01444 CCNA_01446 PF00155 Aminotransferase class I and II CCNA_01447 PF00742 Homoserine dehydrogenase CCNA_01447 PF01842 ACT domain CCNA_01447 PF03447 Homoserine dehydrogenase, NAD binding domain CCNA_01448 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CCNA_01449 PF00316 Fructose-1-6-bisphosphatase CCNA_01450 PF01368 DHH family CCNA_01450 PF02272 DHHA1 domain CCNA_01451 PF00313 'Cold-shock' DNA-binding domain CCNA_01452 PF02643 Uncharacterized ACR, COG1430 CCNA_01453 PF04800 ETC complex I subunit conserved region CCNA_01462 PF01070 FMN-dependent dehydrogenase CCNA_01463 PF00793 DAHP synthetase I family CCNA_01465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_01467 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCNA_01468 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO CCNA_01469 PF05545 CCNA_01469 CCNA_01470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_01470 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CCNA_01471 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CCNA_01471 PF12801 CCNA_01471 CCNA_01471 PF13746 4Fe-4S dicluster domain CCNA_01472 PF05751 CCNA_01472 CCNA_01473 PF00122 E1-E2 ATPase CCNA_01473 PF00403 Heavy-metal-associated domain CCNA_01473 PF00702 haloacid dehalogenase-like hydrolase CCNA_01474 PF03597 CCNA_01474 CCNA_01475 PF03922 OmpW family CCNA_01476 PF00027 Cyclic nucleotide-binding domain CCNA_01476 PF13545 Crp-like helix-turn-helix domain CCNA_01477 PF04055 Radical SAM superfamily CCNA_01478 PF00027 Cyclic nucleotide-binding domain CCNA_01478 PF13545 Crp-like helix-turn-helix domain CCNA_01479 PF08937 MTH538 TIR-like domain (DUF1863) CCNA_01481 PF00211 Adenylate and Guanylate cyclase catalytic domain CCNA_01485 PF01263 Aldose 1-epimerase CCNA_01487 PF00392 Bacterial regulatory proteins, gntR family CCNA_01487 PF07729 FCD domain CCNA_01488 PF00920 Dehydratase family CCNA_01489 PF06964 Alpha-L-arabinofuranosidase C-terminus CCNA_01491 PF01053 Cys/Met metabolism PLP-dependent enzyme CCNA_01492 PF00581 Rhodanese-like domain CCNA_01493 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_01494 PF02353 Mycolic acid cyclopropane synthetase CCNA_01495 PF00875 DNA photolyase CCNA_01495 PF03441 FAD binding domain of DNA photolyase CCNA_01496 PF00793 DAHP synthetase I family CCNA_01497 PF01370 NAD dependent epimerase/dehydratase family CCNA_01498 PF01796 CCNA_01498 CCNA_01498 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCNA_01499 PF00108 Thiolase, N-terminal domain CCNA_01499 PF02803 Thiolase, C-terminal domain CCNA_01500 PF11288 CCNA_01500 CCNA_01502 PF05661 CCNA_01502 CCNA_01503 PF01636 Phosphotransferase enzyme family CCNA_01504 PF00270 DEAD/DEAH box helicase CCNA_01504 PF00271 Helicase conserved C-terminal domain CCNA_01506 PF00005 ABC transporter CCNA_01507 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_01508 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCNA_01509 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCNA_01509 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCNA_01511 PF04116 CCNA_01511 CCNA_01512 PF01797 Transposase IS200 like CCNA_01513 PF03480 Bacterial extracellular solute-binding protein, family 7 CCNA_01514 PF04290 CCNA_01514 CCNA_01515 PF06808 CCNA_01515 CCNA_01516 PF00881 Nitroreductase family CCNA_01519 PF00582 Universal stress protein family CCNA_01522 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_01523 PF13302 Acetyltransferase (GNAT) domain CCNA_01524 PF13432 Tetratricopeptide repeat CCNA_01525 PF07378 CCNA_01525 CCNA_01526 PF07309 CCNA_01526 CCNA_01527 PF00669 Bacterial flagellin N-terminal helical region CCNA_01527 PF00700 Bacterial flagellin C-terminal helical region CCNA_01528 PF00669 Bacterial flagellin N-terminal helical region CCNA_01528 PF00700 Bacterial flagellin C-terminal helical region CCNA_01529 PF03646 FlaG protein CCNA_01530 PF00669 Bacterial flagellin N-terminal helical region CCNA_01530 PF00700 Bacterial flagellin C-terminal helical region CCNA_01531 PF13302 Acetyltransferase (GNAT) domain CCNA_01535 PF00436 Single-strand binding protein family CCNA_01537 PF00583 Acetyltransferase (GNAT) family CCNA_01538 PF00391 PEP-utilising enzyme, mobile domain CCNA_01538 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CCNA_01538 PF02896 PEP-utilising enzyme, TIM barrel domain CCNA_01539 PF02678 Pirin CCNA_01541 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_01541 PF03466 LysR substrate binding domain CCNA_01543 PF00012 Hsp70 protein CCNA_01545 PF03486 HI0933-like protein CCNA_01546 PF00270 DEAD/DEAH box helicase CCNA_01546 PF00271 Helicase conserved C-terminal domain CCNA_01546 PF03880 DbpA RNA binding domain CCNA_01547 PF09334 tRNA synthetases class I (M) CCNA_01548 PF12832 MFS_1 like family CCNA_01549 PF00009 Elongation factor Tu GTP binding domain CCNA_01549 PF01583 Adenylylsulphate kinase CCNA_01550 PF01507 Phosphoadenosine phosphosulfate reductase family CCNA_01553 PF02397 CCNA_01553 CCNA_01554 PF01232 Mannitol dehydrogenase Rossmann domain CCNA_01554 PF08125 Mannitol dehydrogenase C-terminal domain CCNA_01555 PF04295 CCNA_01555 CCNA_01555 PF08666 SAF domain CCNA_01556 PF00356 Bacterial regulatory proteins, lacI family CCNA_01556 PF13377 Periplasmic binding protein-like domain CCNA_01557 PF02614 Glucuronate isomerase CCNA_01558 PF04962 KduI/IolB family CCNA_01559 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01560 PF00311 Phosphoenolpyruvate carboxylase CCNA_01562 PF01081 KDPG and KHG aldolase CCNA_01563 PF00294 pfkB family carbohydrate kinase CCNA_01566 PF06844 Protein of unknown function (DUF1244) CCNA_01567 PF00561 alpha/beta hydrolase fold CCNA_01568 PF00999 Sodium/hydrogen exchanger family CCNA_01569 PF12833 Helix-turn-helix domain CCNA_01570 PF00144 Beta-lactamase CCNA_01571 PF03960 ArsC family CCNA_01572 PF00230 Major intrinsic protein CCNA_01573 PF12840 Helix-turn-helix domain CCNA_01574 PF03358 NADPH-dependent FMN reductase CCNA_01575 PF07995 Glucose / Sorbosone dehydrogenase CCNA_01576 PF07690 Major Facilitator Superfamily CCNA_01577 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCNA_01578 PF03965 Penicillinase repressor CCNA_01579 PF01471 Putative peptidoglycan binding domain CCNA_01579 PF03734 L,D-transpeptidase catalytic domain CCNA_01580 PF05951 CCNA_01580 CCNA_01582 PF04828 Glutathione-dependent formaldehyde-activating enzyme CCNA_01583 PF12849 PBP superfamily domain CCNA_01584 PF00905 Penicillin binding protein transpeptidase domain CCNA_01584 PF00912 Transglycosylase CCNA_01585 PF00593 TonB dependent receptor CCNA_01585 PF07715 TonB-dependent Receptor Plug Domain CCNA_01586 PF00005 ABC transporter CCNA_01587 PF12040 CCNA_01587 CCNA_01588 PF12040 CCNA_01588 CCNA_01589 PF01757 CCNA_01589 CCNA_01590 PF00533 BRCA1 C Terminus (BRCT) domain CCNA_01590 PF01653 NAD-dependent DNA ligase adenylation domain CCNA_01590 PF03120 NAD-dependent DNA ligase OB-fold domain CCNA_01591 PF00929 Exonuclease CCNA_01592 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CCNA_01593 PF00557 Metallopeptidase family M24 CCNA_01593 PF01321 Creatinase/Prolidase N-terminal domain CCNA_01593 PF16188 CCNA_01593 CCNA_01593 PF16189 CCNA_01593 CCNA_01594 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CCNA_01596 PF00580 UvrD/REP helicase N-terminal domain CCNA_01596 PF13361 UvrD-like helicase C-terminal domain CCNA_01597 PF13467 Ribbon-helix-helix domain CCNA_01598 PF04820 Tryptophan halogenase CCNA_01599 PF13770 CCNA_01599 CCNA_01600 PF14100 CCNA_01600 CCNA_01601 PF09939 CCNA_01601 CCNA_01602 PF00043 Glutathione S-transferase, C-terminal domain CCNA_01602 PF02798 Glutathione S-transferase, N-terminal domain CCNA_01603 PF00155 Aminotransferase class I and II CCNA_01605 PF03358 NADPH-dependent FMN reductase CCNA_01606 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCNA_01607 PF09335 CCNA_01607 CCNA_01608 PF00440 Bacterial regulatory proteins, tetR family CCNA_01609 PF00753 Metallo-beta-lactamase superfamily CCNA_01609 PF14863 Alkyl sulfatase dimerisation CCNA_01609 PF14864 Alkyl sulfatase C-terminal CCNA_01610 PF00682 HMGL-like CCNA_01610 PF08502 LeuA allosteric (dimerisation) domain CCNA_01612 PF06723 MreB/Mbl protein CCNA_01613 PF04085 rod shape-determining protein MreC CCNA_01615 PF00905 Penicillin binding protein transpeptidase domain CCNA_01615 PF03717 Penicillin-binding Protein dimerisation domain CCNA_01616 PF01098 CCNA_01616 CCNA_01617 PF13302 Acetyltransferase (GNAT) domain CCNA_01618 PF03167 Uracil DNA glycosylase superfamily CCNA_01619 PF01936 NYN domain CCNA_01620 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCNA_01621 PF01192 RNA polymerase Rpb6 CCNA_01622 PF02824 TGS domain CCNA_01622 PF04607 Region found in RelA / SpoT proteins CCNA_01622 PF13291 ACT domain CCNA_01622 PF13328 HD domain CCNA_01623 PF00293 NUDIX domain CCNA_01624 PF00156 Phosphoribosyl transferase domain CCNA_01625 PF07687 Peptidase dimerisation domain CCNA_01626 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CCNA_01627 PF01648 4'-phosphopantetheinyl transferase superfamily CCNA_01629 PF00717 Peptidase S24-like CCNA_01630 PF00035 Double-stranded RNA binding motif CCNA_01630 PF14622 Ribonuclease-III-like CCNA_01633 PF01926 50S ribosome-binding GTPase CCNA_01633 PF07650 KH domain CCNA_01634 PF00797 N-acetyltransferase CCNA_01635 PF02565 Recombination protein O C terminal CCNA_01635 PF11967 Recombination protein O N terminal CCNA_01636 PF09423 PhoD-like phosphatase CCNA_01636 PF16655 CCNA_01636 CCNA_01637 PF00521 DNA gyrase/topoisomerase IV, subunit A CCNA_01637 PF03989 DNA gyrase C-terminal domain, beta-propeller CCNA_01638 PF00144 Beta-lactamase CCNA_01639 PF00144 Beta-lactamase CCNA_01640 PF00107 Zinc-binding dehydrogenase CCNA_01640 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_01641 PF03060 Nitronate monooxygenase CCNA_01642 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01643 PF04376 CCNA_01643 CCNA_01643 PF04377 CCNA_01643 CCNA_01644 PF00691 OmpA family CCNA_01644 PF13677 CCNA_01644 CCNA_01645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCNA_01645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCNA_01646 PF13500 AAA domain CCNA_01647 PF00155 Aminotransferase class I and II CCNA_01648 PF00202 Aminotransferase class-III CCNA_01649 PF00892 EamA-like transporter family CCNA_01650 PF00080 Copper/zinc superoxide dismutase (SODC) CCNA_01651 PF00521 DNA gyrase/topoisomerase IV, subunit A CCNA_01651 PF03989 DNA gyrase C-terminal domain, beta-propeller CCNA_01652 PF01467 Cytidylyltransferase CCNA_01653 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCNA_01654 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCNA_01655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCNA_01656 PF03372 Endonuclease/Exonuclease/phosphatase family CCNA_01658 PF02547 Queuosine biosynthesis protein CCNA_01659 PF01702 Queuine tRNA-ribosyltransferase CCNA_01663 PF03814 CCNA_01663 CCNA_01664 PF00122 E1-E2 ATPase CCNA_01664 PF00702 haloacid dehalogenase-like hydrolase CCNA_01665 PF02669 CCNA_01665 CCNA_01666 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01666 PF02702 Osmosensitive K+ channel His kinase sensor domain CCNA_01666 PF13493 Domain of unknown function (DUF4118) CCNA_01667 PF00072 Response regulator receiver domain CCNA_01667 PF00486 Transcriptional regulatory protein, C terminal CCNA_01668 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_01669 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_01670 PF00005 ABC transporter CCNA_01671 PF07238 PilZ domain CCNA_01672 PF01841 Transglutaminase-like superfamily CCNA_01672 PF08379 CCNA_01672 CCNA_01673 PF04168 CCNA_01673 CCNA_01674 PF14403 CCNA_01674 CCNA_01675 PF01103 Surface antigen CCNA_01676 PF04357 CCNA_01676 CCNA_01677 PF01546 Peptidase family M20/M25/M40 CCNA_01677 PF07687 Peptidase dimerisation domain CCNA_01678 PF04958 Arginine N-succinyltransferase beta subunit CCNA_01679 PF00171 Aldehyde dehydrogenase family CCNA_01680 PF04996 Succinylarginine dihydrolase CCNA_01681 PF00583 Acetyltransferase (GNAT) family CCNA_01682 PF04397 LytTr DNA-binding domain CCNA_01683 PF01757 CCNA_01683 CCNA_01684 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CCNA_01685 PF08755 Hemimethylated DNA-binding protein YccV like CCNA_01686 PF02541 Ppx/GppA phosphatase family CCNA_01687 PF01728 FtsJ-like methyltransferase CCNA_01688 PF02254 TrkA-N domain CCNA_01688 PF07885 Ion channel CCNA_01689 PF00478 IMP dehydrogenase / GMP reductase domain CCNA_01689 PF00571 CBS domain CCNA_01690 PF01124 MAPEG family CCNA_01691 PF01189 NOL1/NOP2/sun family CCNA_01692 PF00117 Glutamine amidotransferase class-I CCNA_01692 PF00958 GMP synthase C terminal domain CCNA_01692 PF02540 NAD synthase CCNA_01693 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_01693 PF03466 LysR substrate binding domain CCNA_01694 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCNA_01694 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CCNA_01695 PF00593 TonB dependent receptor CCNA_01695 PF07715 TonB-dependent Receptor Plug Domain CCNA_01696 PF03806 CCNA_01696 CCNA_01697 PF09587 Bacterial capsule synthesis protein PGA_cap CCNA_01698 PF06439 Domain of Unknown Function (DUF1080) CCNA_01699 PF00356 Bacterial regulatory proteins, lacI family CCNA_01699 PF13377 Periplasmic binding protein-like domain CCNA_01700 PF03825 CCNA_01700 CCNA_01701 PF01261 Xylose isomerase-like TIM barrel CCNA_01702 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCNA_01702 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCNA_01703 PF01261 Xylose isomerase-like TIM barrel CCNA_01703 PF07582 AP endonuclease family 2 C terminus CCNA_01704 PF00034 Cytochrome c CCNA_01705 PF06439 Domain of Unknown Function (DUF1080) CCNA_01706 PF00732 GMC oxidoreductase CCNA_01706 PF00890 FAD binding domain CCNA_01706 PF05199 GMC oxidoreductase CCNA_01707 PF13618 CCNA_01707 CCNA_01708 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CCNA_01710 PF01266 FAD dependent oxidoreductase CCNA_01710 PF05199 GMC oxidoreductase CCNA_01711 PF05569 BlaR1 peptidase M56 CCNA_01711 PF12796 Ankyrin repeats (3 copies) CCNA_01712 PF03965 Penicillinase repressor CCNA_01713 PF13563 2'-5' RNA ligase superfamily CCNA_01714 PF03960 ArsC family CCNA_01715 PF13419 Haloacid dehalogenase-like hydrolase CCNA_01718 PF04542 Sigma-70 region 2 CCNA_01718 PF08281 Sigma-70, region 4 CCNA_01721 PF04542 Sigma-70 region 2 CCNA_01721 PF04545 Sigma-70, region 4 CCNA_01723 PF02548 Ketopantoate hydroxymethyltransferase CCNA_01724 PF09976 Tetratricopeptide repeat CCNA_01725 PF13360 PQQ-like domain CCNA_01726 PF01926 50S ribosome-binding GTPase CCNA_01726 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCNA_01727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_01727 PF08448 PAS fold CCNA_01728 PF00106 short chain dehydrogenase CCNA_01729 PF13593 SBF-like CPA transporter family (DUF4137) CCNA_01730 PF00156 Phosphoribosyl transferase domain CCNA_01730 PF13537 Glutamine amidotransferase domain CCNA_01731 PF02674 CCNA_01731 CCNA_01732 PF13481 AAA domain CCNA_01732 PF13541 Subunit ChlI of Mg-chelatase CCNA_01733 PF00842 Alanine racemase, C-terminal domain CCNA_01733 PF01168 Alanine racemase, N-terminal domain CCNA_01734 PF01914 CCNA_01734 CCNA_01735 PF03061 Thioesterase superfamily CCNA_01736 PF00440 Bacterial regulatory proteins, tetR family CCNA_01737 PF00772 DnaB-like helicase N terminal domain CCNA_01737 PF03796 DnaB-like helicase C terminal domain CCNA_01738 PF00593 TonB dependent receptor CCNA_01738 PF07715 TonB-dependent Receptor Plug Domain CCNA_01739 PF01281 Ribosomal protein L9, N-terminal domain CCNA_01739 PF03948 Ribosomal protein L9, C-terminal domain CCNA_01740 PF01084 Ribosomal protein S18 CCNA_01741 PF01250 Ribosomal protein S6 CCNA_01743 PF04116 CCNA_01743 CCNA_01744 PF12833 Helix-turn-helix domain CCNA_01745 PF00578 AhpC/TSA family CCNA_01746 PF00698 Acyl transferase domain CCNA_01747 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01748 PF13489 Methyltransferase domain CCNA_01749 PF00550 Phosphopantetheine attachment site CCNA_01750 PF00109 Beta-ketoacyl synthase, N-terminal domain CCNA_01750 PF02801 Beta-ketoacyl synthase, C-terminal domain CCNA_01751 PF02618 YceG-like family CCNA_01752 PF03755 CCNA_01752 CCNA_01752 PF08340 CCNA_01752 CCNA_01753 PF00625 Guanylate kinase CCNA_01754 PF04226 CCNA_01754 CCNA_01755 PF07536 CCNA_01755 CCNA_01757 PF00398 Ribosomal RNA adenine dimethylase CCNA_01758 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CCNA_01759 PF00639 PPIC-type PPIASE domain CCNA_01759 PF09312 SurA N-terminal domain CCNA_01760 PF04453 Organic solvent tolerance protein CCNA_01761 PF03739 CCNA_01761 CCNA_01762 PF03739 CCNA_01762 CCNA_01763 PF00883 Cytosol aminopeptidase family, catalytic domain CCNA_01763 PF02789 Cytosol aminopeptidase family, N-terminal domain CCNA_01764 PF04364 DNA polymerase III chi subunit, HolC CCNA_01766 PF03783 Curli production assembly/transport component CsgG CCNA_01767 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_01769 PF00005 ABC transporter CCNA_01769 PF12848 ABC transporter CCNA_01769 PF16326 CCNA_01769 CCNA_01770 PF00334 Nucleoside diphosphate kinase CCNA_01772 PF06912 CCNA_01772 CCNA_01773 PF09335 CCNA_01773 CCNA_01774 PF00551 Formyl transferase CCNA_01775 PF00586 AIR synthase related protein, N-terminal domain CCNA_01775 PF02769 AIR synthase related protein, C-terminal domain CCNA_01776 PF00570 HRDC domain CCNA_01776 PF01612 3'-5' exonuclease CCNA_01777 PF00072 Response regulator receiver domain CCNA_01777 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01778 PF00144 Beta-lactamase CCNA_01780 PF02541 Ppx/GppA phosphatase family CCNA_01782 PF02503 Polyphosphate kinase middle domain CCNA_01782 PF13089 Polyphosphate kinase N-terminal domain CCNA_01782 PF13090 Polyphosphate kinase C-terminal domain CCNA_01786 PF12787 CCNA_01786 CCNA_01787 PF01548 CCNA_01787 CCNA_01787 PF02371 CCNA_01787 CCNA_01789 PF13302 Acetyltransferase (GNAT) domain CCNA_01790 PF03840 Preprotein translocase SecG subunit CCNA_01791 PF00117 Glutamine amidotransferase class-I CCNA_01791 PF06418 CTP synthase N-terminus CCNA_01792 PF01783 Ribosomal L32p protein family CCNA_01793 PF13650 Aspartyl protease CCNA_01793 PF13975 CCNA_01793 CCNA_01794 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_01795 PF00113 Enolase, C-terminal TIM barrel domain CCNA_01795 PF03952 Enolase, N-terminal domain CCNA_01797 PF04977 Septum formation initiator CCNA_01799 PF00676 Dehydrogenase E1 component CCNA_01800 PF00364 Biotin-requiring enzyme CCNA_01800 PF02779 Transketolase, pyrimidine binding domain CCNA_01800 PF02780 Transketolase, C-terminal domain CCNA_01803 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCNA_01803 PF00364 Biotin-requiring enzyme CCNA_01803 PF02817 e3 binding domain CCNA_01804 PF00255 Glutathione peroxidase CCNA_01805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCNA_01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_01807 PF00501 AMP-binding enzyme CCNA_01808 PF12146 Putative lysophospholipase CCNA_01809 PF04055 Radical SAM superfamily CCNA_01809 PF16881 CCNA_01809 CCNA_01810 PF03364 Polyketide cyclase / dehydrase and lipid transport CCNA_01811 PF02464 Competence-damaged protein CCNA_01812 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CCNA_01812 PF02542 YgbB family CCNA_01813 PF01207 Dihydrouridine synthase (Dus) CCNA_01814 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01814 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01814 PF13188 PAS domain CCNA_01815 PF00072 Response regulator receiver domain CCNA_01815 PF00158 Sigma-54 interaction domain CCNA_01815 PF02954 Bacterial regulatory protein, Fis family CCNA_01816 PF00512 His Kinase A (phospho-acceptor) domain CCNA_01816 PF00672 HAMP domain CCNA_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01817 PF00072 Response regulator receiver domain CCNA_01817 PF00158 Sigma-54 interaction domain CCNA_01817 PF02954 Bacterial regulatory protein, Fis family CCNA_01818 PF01063 Aminotransferase class IV CCNA_01820 PF01926 50S ribosome-binding GTPase CCNA_01820 PF13167 CCNA_01820 CCNA_01820 PF16360 CCNA_01820 CCNA_01821 PF03819 MazG nucleotide pyrophosphohydrolase domain CCNA_01822 PF13347 MFS/sugar transport protein CCNA_01826 PF00593 TonB dependent receptor CCNA_01826 PF07715 TonB-dependent Receptor Plug Domain CCNA_01827 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCNA_01827 PF07685 CobB/CobQ-like glutamine amidotransferase domain CCNA_01828 PF11159 CCNA_01828 CCNA_01829 PF00356 Bacterial regulatory proteins, lacI family CCNA_01829 PF13377 Periplasmic binding protein-like domain CCNA_01830 PF00593 TonB dependent receptor CCNA_01830 PF07715 TonB-dependent Receptor Plug Domain CCNA_01831 PF04820 Tryptophan halogenase CCNA_01832 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_01832 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_01832 PF14310 Fibronectin type III-like domain CCNA_01833 PF02055 O-Glycosyl hydrolase family 30 CCNA_01833 PF17189 CCNA_01833 CCNA_01834 PF02687 CCNA_01834 CCNA_01835 PF00005 ABC transporter CCNA_01836 PF13472 GDSL-like Lipase/Acylhydrolase family CCNA_01837 PF00665 Integrase core domain CCNA_01837 PF13936 Helix-turn-helix domain CCNA_01840 PF06114 Domain of unknown function (DUF955) CCNA_01840 PF09856 CCNA_01840 CCNA_01840 PF13560 Helix-turn-helix domain CCNA_01841 PF00463 Isocitrate lyase family CCNA_01843 PF01274 Malate synthase CCNA_01844 PF00589 Phage integrase family CCNA_01845 PF00072 Response regulator receiver domain CCNA_01845 PF02954 Bacterial regulatory protein, Fis family CCNA_01846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_01847 PF02104 CCNA_01847 CCNA_01848 PF03626 CCNA_01848 CCNA_01849 PF00510 Cytochrome c oxidase subunit III CCNA_01850 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCNA_01851 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCNA_01851 PF06481 COX Aromatic Rich Motif CCNA_01852 PF07690 Major Facilitator Superfamily CCNA_01853 PF11162 CCNA_01853 CCNA_01854 PF00392 Bacterial regulatory proteins, gntR family CCNA_01854 PF07729 FCD domain CCNA_01855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCNA_01855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCNA_01856 PF00593 TonB dependent receptor CCNA_01856 PF07715 TonB-dependent Receptor Plug Domain CCNA_01857 PF01965 DJ-1/PfpI family CCNA_01858 PF01965 DJ-1/PfpI family CCNA_01859 PF00593 TonB dependent receptor CCNA_01859 PF07715 TonB-dependent Receptor Plug Domain CCNA_01860 PF03413 Peptidase propeptide and YPEB domain CCNA_01860 PF03929 CCNA_01860 CCNA_01863 PF02321 Outer membrane efflux protein CCNA_01864 PF00440 Bacterial regulatory proteins, tetR family CCNA_01865 PF16576 CCNA_01865 CCNA_01866 PF00873 AcrB/AcrD/AcrF family CCNA_01868 PF08975 Domain of unknown function (DUF1868) CCNA_01869 PF00593 TonB dependent receptor CCNA_01869 PF07715 TonB-dependent Receptor Plug Domain CCNA_01870 PF00480 ROK family CCNA_01874 PF05598 CCNA_01874 CCNA_01874 PF13751 CCNA_01874 CCNA_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01875 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01876 PF00743 Flavin-binding monooxygenase-like CCNA_01877 PF13622 Thioesterase-like superfamily CCNA_01878 PF00501 AMP-binding enzyme CCNA_01878 PF13193 AMP-binding enzyme C-terminal domain CCNA_01879 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCNA_01880 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01882 PF08450 SMP-30/Gluconolaconase/LRE-like region CCNA_01883 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01883 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01883 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01884 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_01884 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_01884 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_01885 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01886 PF00593 TonB dependent receptor CCNA_01886 PF07715 TonB-dependent Receptor Plug Domain CCNA_01888 PF09339 IclR helix-turn-helix domain CCNA_01889 PF00501 AMP-binding enzyme CCNA_01889 PF13193 AMP-binding enzyme C-terminal domain CCNA_01890 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_01890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCNA_01891 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_01892 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_01893 PF13577 SnoaL-like domain CCNA_01894 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_01895 PF07690 Major Facilitator Superfamily CCNA_01897 PF12706 Beta-lactamase superfamily domain CCNA_01898 PF01026 TatD related DNase CCNA_01899 PF13177 DNA polymerase III, delta subunit CCNA_01900 PF02223 Thymidylate kinase CCNA_01901 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CCNA_01901 PF05036 Sporulation related domain CCNA_01902 PF01402 Ribbon-helix-helix protein, copG family CCNA_01902 PF08753 NikR C terminal nickel binding domain CCNA_01903 PF09347 Domain of unknown function (DUF1989) CCNA_01904 PF09347 Domain of unknown function (DUF1989) CCNA_01905 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCNA_01905 PF00364 Biotin-requiring enzyme CCNA_01905 PF02626 Allophanate hydrolase subunit 2 CCNA_01905 PF02682 Allophanate hydrolase subunit 1 CCNA_01905 PF02785 Biotin carboxylase C-terminal domain CCNA_01905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_01906 PF01425 Amidase CCNA_01907 PF00005 ABC transporter CCNA_01908 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_01909 PF13379 NMT1-like family CCNA_01911 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_01912 PF08803 Putative mono-oxygenase ydhR CCNA_01913 PF01638 HxlR-like helix-turn-helix CCNA_01914 PF05175 Methyltransferase small domain CCNA_01915 PF00849 RNA pseudouridylate synthase CCNA_01915 PF01479 S4 domain CCNA_01916 PF03631 CCNA_01916 CCNA_01917 PF02515 CoA-transferase family III CCNA_01918 PF00990 GGDEF domain CCNA_01919 PF01323 DSBA-like thioredoxin domain CCNA_01920 PF00270 DEAD/DEAH box helicase CCNA_01920 PF00271 Helicase conserved C-terminal domain CCNA_01920 PF02559 CarD-like/TRCF domain CCNA_01920 PF03461 TRCF domain CCNA_01921 PF03937 Flavinator of succinate dehydrogenase CCNA_01922 PF08241 Methyltransferase domain CCNA_01923 PF00270 DEAD/DEAH box helicase CCNA_01923 PF00271 Helicase conserved C-terminal domain CCNA_01924 PF04577 CCNA_01924 CCNA_01925 PF00171 Aldehyde dehydrogenase family CCNA_01926 PF00990 GGDEF domain CCNA_01927 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_01928 PF10000 ACT domain CCNA_01928 PF13840 ACT domain CCNA_01930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCNA_01931 PF00440 Bacterial regulatory proteins, tetR family CCNA_01932 PF01553 Acyltransferase CCNA_01934 PF01521 Iron-sulphur cluster biosynthesis CCNA_01935 PF01883 Domain of unknown function DUF59 CCNA_01936 PF00266 Aminotransferase class-V CCNA_01937 PF01458 Uncharacterized protein family (UPF0051) CCNA_01938 PF00005 ABC transporter CCNA_01940 PF01458 Uncharacterized protein family (UPF0051) CCNA_01941 PF00266 Aminotransferase class-V CCNA_01942 PF02082 Transcriptional regulator CCNA_01943 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCNA_01944 PF01844 HNH endonuclease CCNA_01945 PF03702 Uncharacterised protein family (UPF0075) CCNA_01946 PF00579 tRNA synthetases class I (W and Y) CCNA_01947 PF00578 AhpC/TSA family CCNA_01948 PF01551 Peptidase family M23 CCNA_01949 PF04519 CCNA_01949 CCNA_01950 PF00472 RF-1 domain CCNA_01950 PF03462 PCRF domain CCNA_01951 PF00905 Penicillin binding protein transpeptidase domain CCNA_01951 PF00912 Transglycosylase CCNA_01951 PF17092 CCNA_01951 CCNA_01952 PF01520 N-acetylmuramoyl-L-alanine amidase CCNA_01954 PF10150 Ribonuclease E/G family CCNA_01955 PF01435 Peptidase family M48 CCNA_01955 PF13432 Tetratricopeptide repeat CCNA_01956 PF01323 DSBA-like thioredoxin domain CCNA_01957 PF05690 Thiazole biosynthesis protein ThiG CCNA_01958 PF02597 ThiS family CCNA_01959 PF01220 Dehydroquinase class II CCNA_01960 PF00364 Biotin-requiring enzyme CCNA_01961 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCNA_01961 PF02785 Biotin carboxylase C-terminal domain CCNA_01961 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_01962 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CCNA_01963 PF09923 CCNA_01963 CCNA_01964 PF05071 CCNA_01964 CCNA_01967 PF00805 Pentapeptide repeats (8 copies) CCNA_01968 PF00805 Pentapeptide repeats (8 copies) CCNA_01968 PF13599 Pentapeptide repeats (9 copies) CCNA_01969 PF00152 tRNA synthetases class II (D, K and N) CCNA_01969 PF01336 OB-fold nucleic acid binding domain CCNA_01969 PF02938 GAD domain CCNA_01970 PF00121 Triosephosphate isomerase CCNA_01971 PF13145 PPIC-type PPIASE domain CCNA_01971 PF13624 SurA N-terminal domain CCNA_01972 PF00425 chorismate binding enzyme CCNA_01972 PF04715 Anthranilate synthase component I, N terminal region CCNA_01974 PF00117 Glutamine amidotransferase class-I CCNA_01975 PF00591 Glycosyl transferase family, a/b domain CCNA_01975 PF02885 Glycosyl transferase family, helical bundle domain CCNA_01976 PF00218 Indole-3-glycerol phosphate synthase CCNA_01977 PF01553 Acyltransferase CCNA_01978 PF08241 Methyltransferase domain CCNA_01979 PF00717 Peptidase S24-like CCNA_01979 PF01726 LexA DNA binding domain CCNA_01980 PF13714 Phosphoenolpyruvate phosphomutase CCNA_01981 PF03772 CCNA_01981 CCNA_01981 PF13567 CCNA_01981 CCNA_01982 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCNA_01983 PF00285 Citrate synthase CCNA_01984 PF01312 FlhB HrpN YscU SpaS Family CCNA_01985 PF02120 Flagellar hook-length control protein FliK CCNA_01986 PF02684 CCNA_01986 CCNA_01987 PF06230 Protein of unknown function (DUF1009) CCNA_01988 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_01988 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CCNA_01989 PF07977 FabA-like domain CCNA_01990 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_01990 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CCNA_01991 PF03938 Outer membrane protein (OmpH-like) CCNA_01992 PF01103 Surface antigen CCNA_01992 PF07244 Surface antigen variable number repeat CCNA_01993 PF02163 Peptidase family M50 CCNA_01993 PF13180 PDZ domain CCNA_01994 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CCNA_01994 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CCNA_01994 PF13288 DXP reductoisomerase C-terminal domain CCNA_01995 PF01148 Cytidylyltransferase family CCNA_01996 PF01255 Putative undecaprenyl diphosphate synthase CCNA_01997 PF01765 Ribosome recycling factor CCNA_01998 PF00696 Amino acid kinase family CCNA_01999 PF00889 Elongation factor TS CCNA_02000 PF00318 Ribosomal protein S2 CCNA_02001 PF12710 haloacid dehalogenase-like hydrolase CCNA_02002 PF13489 Methyltransferase domain CCNA_02003 PF02811 PHP domain CCNA_02003 PF07733 Bacterial DNA polymerase III alpha subunit CCNA_02003 PF14579 Helix-hairpin-helix motif CCNA_02005 PF01156 Inosine-uridine preferring nucleoside hydrolase CCNA_02006 PF00005 ABC transporter CCNA_02007 PF02687 CCNA_02007 CCNA_02007 PF12704 MacB-like periplasmic core domain CCNA_02008 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCNA_02008 PF03129 Anticodon binding domain CCNA_02010 PF07330 CCNA_02010 CCNA_02011 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_02012 PF07521 RNA-metabolising metallo-beta-lactamase CCNA_02012 PF12706 Beta-lactamase superfamily domain CCNA_02013 PF03309 Type III pantothenate kinase CCNA_02014 PF02237 Biotin protein ligase C terminal domain CCNA_02014 PF03099 Biotin/lipoate A/B protein ligase family CCNA_02015 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CCNA_02016 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CCNA_02016 PF01059 CCNA_02016 CCNA_02017 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CCNA_02017 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCNA_02018 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CCNA_02019 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CCNA_02020 PF12838 4Fe-4S dicluster domain CCNA_02022 PF00146 NADH dehydrogenase CCNA_02023 PF00384 Molybdopterin oxidoreductase CCNA_02023 PF09326 CCNA_02023 CCNA_02023 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CCNA_02023 PF13510 2Fe-2S iron-sulfur cluster binding domain CCNA_02024 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CCNA_02024 PF10531 SLBB domain CCNA_02024 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CCNA_02027 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CCNA_02028 PF12680 SnoaL-like domain CCNA_02029 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CCNA_02031 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CCNA_02032 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CCNA_02033 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CCNA_02034 PF00296 Luciferase-like monooxygenase CCNA_02035 PF00534 Glycosyl transferases group 1 CCNA_02035 PF13439 Glycosyltransferase Family 4 CCNA_02036 PF00216 Bacterial DNA-binding protein CCNA_02037 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_02037 PF02190 ATP-dependent protease La (LON) domain CCNA_02037 PF05362 Lon protease (S16) C-terminal proteolytic domain CCNA_02039 PF06689 ClpX C4-type zinc finger CCNA_02039 PF07724 AAA domain (Cdc48 subfamily) CCNA_02039 PF10431 C-terminal, D2-small domain, of ClpB protein CCNA_02040 PF12710 haloacid dehalogenase-like hydrolase CCNA_02041 PF00574 Clp protease CCNA_02042 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCNA_02042 PF05697 Bacterial trigger factor protein (TF) CCNA_02042 PF05698 Bacterial trigger factor protein (TF) C-terminus CCNA_02043 PF01256 Carbohydrate kinase CCNA_02043 PF03853 YjeF-related protein N-terminus CCNA_02044 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_02046 PF00543 Nitrogen regulatory protein P-II CCNA_02047 PF00120 Glutamine synthetase, catalytic domain CCNA_02047 PF03951 Glutamine synthetase, beta-Grasp domain CCNA_02048 PF00593 TonB dependent receptor CCNA_02048 PF07715 TonB-dependent Receptor Plug Domain CCNA_02049 PF03992 Antibiotic biosynthesis monooxygenase CCNA_02050 PF07969 Amidohydrolase family CCNA_02051 PF01979 Amidohydrolase family CCNA_02052 PF00204 DNA gyrase B CCNA_02052 PF00986 DNA gyrase B subunit, carboxyl terminus CCNA_02052 PF01751 Toprim domain CCNA_02052 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02054 PF01039 Carboxyl transferase domain CCNA_02055 PF02694 CCNA_02055 CCNA_02056 PF07542 ATP12 chaperone protein CCNA_02057 PF08811 CCNA_02057 CCNA_02058 PF07394 CCNA_02058 CCNA_02059 PF00849 RNA pseudouridylate synthase CCNA_02060 PF02537 CCNA_02060 CCNA_02062 PF02463 RecF/RecN/SMC N terminal domain CCNA_02063 PF13525 Outer membrane lipoprotein CCNA_02064 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CCNA_02065 PF00326 Prolyl oligopeptidase family CCNA_02065 PF07676 WD40-like Beta Propeller Repeat CCNA_02066 PF00494 Squalene/phytoene synthase CCNA_02067 PF06181 CCNA_02067 CCNA_02068 PF04430 Protein of unknown function (DUF498/DUF598) CCNA_02069 PF02355 Protein export membrane protein CCNA_02069 PF07549 SecD/SecF GG Motif CCNA_02070 PF02355 Protein export membrane protein CCNA_02070 PF07549 SecD/SecF GG Motif CCNA_02071 PF02699 Preprotein translocase subunit CCNA_02072 PF05673 Protein of unknown function (DUF815) CCNA_02073 PF13560 Helix-turn-helix domain CCNA_02074 PF00583 Acetyltransferase (GNAT) family CCNA_02075 PF01476 LysM domain CCNA_02075 PF01551 Peptidase family M23 CCNA_02076 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CCNA_02077 PF01975 Survival protein SurE CCNA_02078 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCNA_02078 PF02403 Seryl-tRNA synthetase N-terminal domain CCNA_02080 PF00902 Sec-independent protein translocase protein (TatC) CCNA_02081 PF02416 mttA/Hcf106 family CCNA_02082 PF02416 mttA/Hcf106 family CCNA_02083 PF04079 Putative transcriptional regulators (Ypuh-like) CCNA_02084 PF02616 ScpA/B protein CCNA_02085 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_02086 PF05036 Sporulation related domain CCNA_02087 PF01966 HD domain CCNA_02087 PF13286 Phosphohydrolase-associated domain CCNA_02088 PF01521 Iron-sulphur cluster biosynthesis CCNA_02090 PF03372 Endonuclease/Exonuclease/phosphatase family CCNA_02092 PF01810 CCNA_02092 CCNA_02093 PF05960 Bacterial protein of unknown function (DUF885) CCNA_02094 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCNA_02095 PF00107 Zinc-binding dehydrogenase CCNA_02095 PF16884 CCNA_02095 CCNA_02096 PF11604 Copper binding periplasmic protein CusF CCNA_02097 PF13632 Glycosyl transferase family group 2 CCNA_02099 PF01554 MatE CCNA_02101 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_02102 PF06283 Trehalose utilisation CCNA_02103 PF09998 CCNA_02103 CCNA_02106 PF00593 TonB dependent receptor CCNA_02106 PF07715 TonB-dependent Receptor Plug Domain CCNA_02108 PF03572 Peptidase family S41 CCNA_02109 PF01964 ThiC family CCNA_02109 PF13667 ThiC-associated domain CCNA_02111 PF00515 Tetratricopeptide repeat CCNA_02112 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_02113 PF01177 Asp/Glu/Hydantoin racemase CCNA_02115 PF09492 Pectic acid lyase CCNA_02117 PF03364 Polyketide cyclase / dehydrase and lipid transport CCNA_02118 PF13307 Helicase C-terminal domain CCNA_02120 PF08238 Sel1 repeat CCNA_02121 PF00270 DEAD/DEAH box helicase CCNA_02121 PF00271 Helicase conserved C-terminal domain CCNA_02121 PF08494 CCNA_02121 CCNA_02123 PF13586 CCNA_02123 CCNA_02124 PF11911 CCNA_02124 CCNA_02125 PF01471 Putative peptidoglycan binding domain CCNA_02125 PF08238 Sel1 repeat CCNA_02127 PF09924 Uncharacterized conserved protein (DUF2156) CCNA_02128 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02128 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02128 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02129 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02129 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02129 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02130 PF00224 Pyruvate kinase, barrel domain CCNA_02130 PF02887 Pyruvate kinase, alpha/beta domain CCNA_02131 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_02131 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_02132 PF00356 Bacterial regulatory proteins, lacI family CCNA_02132 PF13377 Periplasmic binding protein-like domain CCNA_02133 PF02685 Glucokinase CCNA_02134 PF00920 Dehydratase family CCNA_02135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CCNA_02136 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CCNA_02136 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CCNA_02140 PF01052 Surface presentation of antigens (SPOA) CCNA_02140 PF02154 Flagellar motor switch protein FliM CCNA_02141 PF03748 CCNA_02141 CCNA_02142 PF00460 Flagella basal body rod protein CCNA_02142 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_02143 PF00460 Flagella basal body rod protein CCNA_02143 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_02144 PF13144 SAF-like CCNA_02145 PF02107 CCNA_02145 CCNA_02149 PF02779 Transketolase, pyrimidine binding domain CCNA_02149 PF02780 Transketolase, C-terminal domain CCNA_02149 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CCNA_02150 PF00348 Polyprenyl synthetase CCNA_02151 PF02609 Exonuclease VII small subunit CCNA_02152 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_02153 PF00850 Histone deacetylase domain CCNA_02154 PF00583 Acetyltransferase (GNAT) family CCNA_02155 PF05762 VWA domain containing CoxE-like protein CCNA_02157 PF13560 Helix-turn-helix domain CCNA_02158 PF00535 Glycosyl transferase family 2 CCNA_02161 PF00440 Bacterial regulatory proteins, tetR family CCNA_02164 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCNA_02164 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCNA_02165 PF12146 Putative lysophospholipase CCNA_02166 PF03167 Uracil DNA glycosylase superfamily CCNA_02167 PF13417 Glutathione S-transferase, N-terminal domain CCNA_02167 PF14497 Glutathione S-transferase, C-terminal domain CCNA_02169 PF03061 Thioesterase superfamily CCNA_02170 PF00043 Glutathione S-transferase, C-terminal domain CCNA_02170 PF13417 Glutathione S-transferase, N-terminal domain CCNA_02171 PF01773 Na+ dependent nucleoside transporter N-terminus CCNA_02171 PF07662 Na+ dependent nucleoside transporter C-terminus CCNA_02171 PF07670 Nucleoside recognition CCNA_02172 PF02687 CCNA_02172 CCNA_02173 PF00005 ABC transporter CCNA_02174 PF16576 CCNA_02174 CCNA_02178 PF00106 short chain dehydrogenase CCNA_02179 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CCNA_02180 PF01883 Domain of unknown function DUF59 CCNA_02180 PF10609 ParA/MinD ATPase like CCNA_02181 PF13419 Haloacid dehalogenase-like hydrolase CCNA_02182 PF12710 haloacid dehalogenase-like hydrolase CCNA_02183 PF01715 IPP transferase CCNA_02184 PF02464 Competence-damaged protein CCNA_02185 PF00205 Thiamine pyrophosphate enzyme, central domain CCNA_02185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCNA_02185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCNA_02186 PF01842 ACT domain CCNA_02186 PF10369 Small subunit of acetolactate synthase CCNA_02187 PF04386 Stringent starvation protein B CCNA_02188 PF03061 Thioesterase superfamily CCNA_02189 PF01650 Peptidase C13 family CCNA_02190 PF00144 Beta-lactamase CCNA_02192 PF05866 Endodeoxyribonuclease RusA CCNA_02193 PF08002 Protein of unknown function (DUF1697) CCNA_02194 PF00206 Lyase CCNA_02194 PF10415 Fumarase C C-terminus CCNA_02195 PF13673 Acetyltransferase (GNAT) domain CCNA_02196 PF03733 CCNA_02196 CCNA_02198 PF00348 Polyprenyl synthetase CCNA_02199 PF13847 Methyltransferase domain CCNA_02200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_02201 PF05014 Nucleoside 2-deoxyribosyltransferase CCNA_02202 PF00188 Cysteine-rich secretory protein family CCNA_02203 PF04264 YceI-like domain CCNA_02204 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CCNA_02204 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CCNA_02205 PF11776 Domain of unknown function (DUF3315) CCNA_02206 PF06041 Bacterial protein of unknown function (DUF924) CCNA_02208 PF00303 Thymidylate synthase CCNA_02209 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_02209 PF13602 Zinc-binding dehydrogenase CCNA_02210 PF00186 Dihydrofolate reductase CCNA_02211 PF12412 CCNA_02211 CCNA_02212 PF08450 SMP-30/Gluconolaconase/LRE-like region CCNA_02213 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCNA_02215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02215 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02216 PF03992 Antibiotic biosynthesis monooxygenase CCNA_02218 PF00226 DnaJ domain CCNA_02218 PF05099 Tellurite resistance protein TerB CCNA_02220 PF00232 Glycosyl hydrolase family 1 CCNA_02221 PF00809 Pterin binding enzyme CCNA_02221 PF02310 B12 binding domain CCNA_02221 PF02607 B12 binding domain CCNA_02221 PF02965 Vitamin B12 dependent methionine synthase, activation domain CCNA_02222 PF02574 Homocysteine S-methyltransferase CCNA_02223 PF00753 Metallo-beta-lactamase superfamily CCNA_02224 PF02219 Methylenetetrahydrofolate reductase CCNA_02225 PF01022 Bacterial regulatory protein, arsR family CCNA_02225 PF08241 Methyltransferase domain CCNA_02227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_02227 PF03466 LysR substrate binding domain CCNA_02228 PF12680 SnoaL-like domain CCNA_02230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCNA_02230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCNA_02231 PF00005 ABC transporter CCNA_02231 PF12848 ABC transporter CCNA_02232 PF00593 TonB dependent receptor CCNA_02232 PF07715 TonB-dependent Receptor Plug Domain CCNA_02233 PF00717 Peptidase S24-like CCNA_02234 PF13202 EF hand CCNA_02235 PF13472 GDSL-like Lipase/Acylhydrolase family CCNA_02236 PF01522 Polysaccharide deacetylase CCNA_02237 PF00326 Prolyl oligopeptidase family CCNA_02237 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CCNA_02239 PF04339 CCNA_02239 CCNA_02240 PF03009 Glycerophosphoryl diester phosphodiesterase family CCNA_02241 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease CCNA_02242 PF09361 CCNA_02242 CCNA_02243 PF00768 D-alanyl-D-alanine carboxypeptidase CCNA_02243 PF05036 Sporulation related domain CCNA_02244 PF00155 Aminotransferase class I and II CCNA_02246 PF09140 ATPase MipZ CCNA_02247 PF02569 Pantoate-beta-alanine ligase CCNA_02249 PF07370 CCNA_02249 CCNA_02250 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCNA_02250 PF00364 Biotin-requiring enzyme CCNA_02250 PF02785 Biotin carboxylase C-terminal domain CCNA_02250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_02251 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_02252 PF01039 Carboxyl transferase domain CCNA_02253 PF00027 Cyclic nucleotide-binding domain CCNA_02253 PF01734 Patatin-like phospholipase CCNA_02254 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02254 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02254 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02255 PF00959 Phage lysozyme CCNA_02256 PF00571 CBS domain CCNA_02256 PF01769 Divalent cation transporter CCNA_02256 PF03448 MgtE intracellular N domain CCNA_02257 PF01052 Surface presentation of antigens (SPOA) CCNA_02258 PF03099 Biotin/lipoate A/B protein ligase family CCNA_02260 PF05656 CCNA_02260 CCNA_02261 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCNA_02261 PF00364 Biotin-requiring enzyme CCNA_02261 PF02785 Biotin carboxylase C-terminal domain CCNA_02261 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_02262 PF13385 Concanavalin A-like lectin/glucanases superfamily CCNA_02263 PF03928 Domain of unknown function (DUF336) CCNA_02264 PF01965 DJ-1/PfpI family CCNA_02265 PF01641 SelR domain CCNA_02266 PF13410 Glutathione S-transferase, C-terminal domain CCNA_02266 PF13417 Glutathione S-transferase, N-terminal domain CCNA_02267 PF06821 Serine hydrolase CCNA_02268 PF13385 Concanavalin A-like lectin/glucanases superfamily CCNA_02269 PF03576 Peptidase family S58 CCNA_02270 PF12802 MarR family CCNA_02273 PF11730 CCNA_02273 CCNA_02274 PF13202 EF hand CCNA_02275 PF10670 CCNA_02275 CCNA_02277 PF00593 TonB dependent receptor CCNA_02277 PF07715 TonB-dependent Receptor Plug Domain CCNA_02278 PF09335 CCNA_02278 CCNA_02279 PF02600 Disulfide bond formation protein DsbB CCNA_02280 PF03232 CCNA_02280 CCNA_02281 PF01433 Peptidase family M1 CCNA_02282 PF04892 CCNA_02282 CCNA_02283 PF14279 CCNA_02283 CCNA_02284 PF00730 HhH-GPD superfamily base excision DNA repair protein CCNA_02285 PF01272 Transcription elongation factor, GreA/GreB, C-term CCNA_02287 PF00440 Bacterial regulatory proteins, tetR family CCNA_02287 PF13305 WHG domain CCNA_02288 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCNA_02289 PF13601 Winged helix DNA-binding domain CCNA_02291 PF01757 CCNA_02291 CCNA_02292 PF00583 Acetyltransferase (GNAT) family CCNA_02293 PF08534 Redoxin CCNA_02294 PF00206 Lyase CCNA_02294 PF14698 Argininosuccinate lyase C-terminal CCNA_02296 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCNA_02296 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCNA_02297 PF00156 Phosphoribosyl transferase domain CCNA_02298 PF13717 CCNA_02298 CCNA_02299 PF00005 ABC transporter CCNA_02301 PF02698 DUF218 domain CCNA_02302 PF01553 Acyltransferase CCNA_02303 PF04752 CCNA_02303 CCNA_02304 PF09898 CCNA_02304 CCNA_02305 PF01817 Chorismate mutase type II CCNA_02306 PF00155 Aminotransferase class I and II CCNA_02307 PF02153 Prephenate dehydrogenase CCNA_02309 PF13202 EF hand CCNA_02310 PF00759 Glycosyl hydrolase family 9 CCNA_02310 PF02927 N-terminal ig-like domain of cellulase CCNA_02312 PF01963 CCNA_02312 CCNA_02313 PF00561 alpha/beta hydrolase fold CCNA_02315 PF01381 Helix-turn-helix CCNA_02320 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) CCNA_02321 PF01053 Cys/Met metabolism PLP-dependent enzyme CCNA_02322 PF04379 Protein of unknown function (DUF525) CCNA_02324 PF01430 Hsp33 protein CCNA_02325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCNA_02325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCNA_02326 PF00202 Aminotransferase class-III CCNA_02327 PF01061 CCNA_02327 CCNA_02328 PF07750 CCNA_02328 CCNA_02329 PF02601 CCNA_02329 CCNA_02329 PF13742 CCNA_02329 CCNA_02330 PF09866 CCNA_02330 CCNA_02331 PF01551 Peptidase family M23 CCNA_02332 PF00072 Response regulator receiver domain CCNA_02333 PF03279 CCNA_02333 CCNA_02334 PF01381 Helix-turn-helix CCNA_02335 PF00459 Inositol monophosphatase family CCNA_02336 PF12146 Putative lysophospholipase CCNA_02337 PF02036 SCP-2 sterol transfer family CCNA_02341 PF00011 Hsp20/alpha crystallin family CCNA_02342 PF00805 Pentapeptide repeats (8 copies) CCNA_02343 PF00805 Pentapeptide repeats (8 copies) CCNA_02344 PF00300 Histidine phosphatase superfamily (branch 1) CCNA_02346 PF00571 CBS domain CCNA_02346 PF01380 SIS domain CCNA_02347 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCNA_02347 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCNA_02347 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCNA_02347 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCNA_02348 PF13673 Acetyltransferase (GNAT) domain CCNA_02349 PF01048 Phosphorylase superfamily CCNA_02350 PF07876 Stress responsive A/B Barrel Domain CCNA_02351 PF14681 Uracil phosphoribosyltransferase CCNA_02352 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCNA_02353 PF00111 2Fe-2S iron-sulfur cluster binding domain CCNA_02353 PF01799 [2Fe-2S] binding domain CCNA_02354 PF00293 NUDIX domain CCNA_02355 PF00730 HhH-GPD superfamily base excision DNA repair protein CCNA_02356 PF01427 D-ala-D-ala dipeptidase CCNA_02357 PF00171 Aldehyde dehydrogenase family CCNA_02358 PF01613 Flavin reductase like domain CCNA_02360 PF00535 Glycosyl transferase family 2 CCNA_02361 PF13480 Acetyltransferase (GNAT) domain CCNA_02362 PF13185 GAF domain CCNA_02364 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02364 PF00672 HAMP domain CCNA_02364 PF02743 Cache domain CCNA_02365 PF00723 Glycosyl hydrolases family 15 CCNA_02365 PF09137 Glucodextranase, domain N CCNA_02366 PF07690 Major Facilitator Superfamily CCNA_02367 PF00356 Bacterial regulatory proteins, lacI family CCNA_02367 PF13377 Periplasmic binding protein-like domain CCNA_02368 PF00128 Alpha amylase, catalytic domain CCNA_02369 PF00128 Alpha amylase, catalytic domain CCNA_02370 PF07715 TonB-dependent Receptor Plug Domain CCNA_02371 PF04820 Tryptophan halogenase CCNA_02373 PF13276 CCNA_02373 CCNA_02373 PF13683 CCNA_02373 CCNA_02374 PF01527 Transposase CCNA_02378 PF04402 Protein of unknown function (DUF541) CCNA_02380 PF02261 Aspartate decarboxylase CCNA_02382 PF01551 Peptidase family M23 CCNA_02383 PF07859 alpha/beta hydrolase fold CCNA_02384 PF00501 AMP-binding enzyme CCNA_02385 PF01474 Class-II DAHP synthetase family CCNA_02387 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCNA_02387 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_02388 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCNA_02389 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_02389 PF12804 MobA-like NTP transferase domain CCNA_02390 PF13419 Haloacid dehalogenase-like hydrolase CCNA_02391 PF00106 short chain dehydrogenase CCNA_02392 PF12680 SnoaL-like domain CCNA_02394 PF02798 Glutathione S-transferase, N-terminal domain CCNA_02396 PF17171 CCNA_02396 CCNA_02396 PF17172 CCNA_02396 CCNA_02397 PF08279 HTH domain CCNA_02397 PF13280 CCNA_02397 CCNA_02398 PF00326 Prolyl oligopeptidase family CCNA_02399 PF00588 SpoU rRNA Methylase family CCNA_02400 PF07690 Major Facilitator Superfamily CCNA_02401 PF00356 Bacterial regulatory proteins, lacI family CCNA_02401 PF13377 Periplasmic binding protein-like domain CCNA_02402 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02402 PF11563 Protoglobin CCNA_02403 PF02405 CCNA_02403 CCNA_02404 PF00005 ABC transporter CCNA_02405 PF02470 CCNA_02405 CCNA_02406 PF03886 Protein of unknown function (DUF330) CCNA_02408 PF10098 CCNA_02408 CCNA_02409 PF00072 Response regulator receiver domain CCNA_02409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02410 PF02515 CoA-transferase family III CCNA_02411 PF01464 Transglycosylase SLT domain CCNA_02412 PF03544 Gram-negative bacterial TonB protein C-terminal CCNA_02413 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02413 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02413 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02414 PF01266 FAD dependent oxidoreductase CCNA_02415 PF01381 Helix-turn-helix CCNA_02416 PF00216 Bacterial DNA-binding protein CCNA_02418 PF03167 Uracil DNA glycosylase superfamily CCNA_02418 PF13566 CCNA_02418 CCNA_02419 PF03544 Gram-negative bacterial TonB protein C-terminal CCNA_02420 PF02472 Biopolymer transport protein ExbD/TolR CCNA_02421 PF01618 CCNA_02421 CCNA_02422 PF00106 short chain dehydrogenase CCNA_02423 PF09912 CCNA_02423 CCNA_02424 PF00440 Bacterial regulatory proteins, tetR family CCNA_02424 PF13305 WHG domain CCNA_02425 PF03884 Domain of unknown function (DUF329) CCNA_02426 PF10150 Ribonuclease E/G family CCNA_02427 PF02545 Maf-like protein CCNA_02428 PF01176 Translation initiation factor 1A / IF-1 CCNA_02429 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCNA_02430 PF06793 CCNA_02430 CCNA_02431 PF00815 Histidinol dehydrogenase CCNA_02432 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CCNA_02434 PF11164 CCNA_02434 CCNA_02435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCNA_02437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_02437 PF03466 LysR substrate binding domain CCNA_02438 PF13602 Zinc-binding dehydrogenase CCNA_02439 PF07690 Major Facilitator Superfamily CCNA_02440 PF00356 Bacterial regulatory proteins, lacI family CCNA_02440 PF13377 Periplasmic binding protein-like domain CCNA_02441 PF00196 Bacterial regulatory proteins, luxR family CCNA_02442 PF01229 Glycosyl hydrolases family 39 CCNA_02443 PF01738 Dienelactone hydrolase family CCNA_02444 PF01112 Asparaginase CCNA_02445 PF03932 CutC family CCNA_02446 PF03738 Glutathionylspermidine synthase preATP-grasp CCNA_02447 PF04012 CCNA_02447 CCNA_02448 PF09938 CCNA_02448 CCNA_02449 PF10679 CCNA_02449 CCNA_02450 PF03994 CCNA_02450 CCNA_02451 PF06693 CCNA_02451 CCNA_02453 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCNA_02454 PF01968 Hydantoinase/oxoprolinase CCNA_02454 PF02538 CCNA_02454 CCNA_02454 PF05378 CCNA_02454 CCNA_02455 PF01169 CCNA_02455 CCNA_02456 PF10983 CCNA_02456 CCNA_02457 PF03060 Nitronate monooxygenase CCNA_02458 PF01642 Methylmalonyl-CoA mutase CCNA_02459 PF01642 Methylmalonyl-CoA mutase CCNA_02459 PF02310 B12 binding domain CCNA_02460 PF13430 CCNA_02460 CCNA_02461 PF13430 CCNA_02461 CCNA_02462 PF01906 Putative heavy-metal-binding CCNA_02463 PF01370 NAD dependent epimerase/dehydratase family CCNA_02464 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCNA_02464 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCNA_02464 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCNA_02465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCNA_02465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCNA_02465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCNA_02466 PF16363 CCNA_02466 CCNA_02467 PF02397 CCNA_02467 CCNA_02469 PF07804 HipA-like C-terminal domain CCNA_02471 PF02321 Outer membrane efflux protein CCNA_02472 PF13437 HlyD family secretion protein CCNA_02473 PF00873 AcrB/AcrD/AcrF family CCNA_02474 PF12802 MarR family CCNA_02475 PF00392 Bacterial regulatory proteins, gntR family CCNA_02475 PF07729 FCD domain CCNA_02476 PF00355 Rieske [2Fe-2S] domain CCNA_02477 PF00111 2Fe-2S iron-sulfur cluster binding domain CCNA_02478 PF00561 alpha/beta hydrolase fold CCNA_02479 PF00107 Zinc-binding dehydrogenase CCNA_02479 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_02480 PF00171 Aldehyde dehydrogenase family CCNA_02481 PF00593 TonB dependent receptor CCNA_02481 PF07715 TonB-dependent Receptor Plug Domain CCNA_02482 PF12833 Helix-turn-helix domain CCNA_02482 PF14525 CCNA_02482 CCNA_02483 PF00501 AMP-binding enzyme CCNA_02483 PF13193 AMP-binding enzyme C-terminal domain CCNA_02484 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_02485 PF00171 Aldehyde dehydrogenase family CCNA_02486 PF12833 Helix-turn-helix domain CCNA_02487 PF01494 FAD binding domain CCNA_02488 PF01144 Coenzyme A transferase CCNA_02489 PF01144 Coenzyme A transferase CCNA_02490 PF00108 Thiolase, N-terminal domain CCNA_02490 PF02803 Thiolase, C-terminal domain CCNA_02491 PF00775 Dioxygenase CCNA_02491 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CCNA_02492 PF00775 Dioxygenase CCNA_02493 PF00206 Lyase CCNA_02494 PF00561 alpha/beta hydrolase fold CCNA_02494 PF02627 Carboxymuconolactone decarboxylase family CCNA_02495 PF07690 Major Facilitator Superfamily CCNA_02496 PF07394 CCNA_02496 CCNA_02497 PF08811 CCNA_02497 CCNA_02498 PF01464 Transglycosylase SLT domain CCNA_02499 PF04956 CCNA_02499 CCNA_02500 PF05101 CCNA_02500 CCNA_02501 PF03135 CCNA_02501 CCNA_02502 PF04610 CCNA_02502 CCNA_02503 PF03524 Conjugal transfer protein CCNA_02504 PF03743 Bacterial conjugation TrbI-like protein CCNA_02505 PF00437 Type II/IV secretion system protein CCNA_02507 PF02397 CCNA_02507 CCNA_02507 PF13727 CoA-binding domain CCNA_02508 PF13440 CCNA_02508 CCNA_02508 PF14667 Polysaccharide biosynthesis C-terminal domain CCNA_02509 PF00535 Glycosyl transferase family 2 CCNA_02510 PF01522 Polysaccharide deacetylase CCNA_02511 PF04932 CCNA_02511 CCNA_02513 PF02706 Chain length determinant protein CCNA_02514 PF02563 Polysaccharide biosynthesis/export protein CCNA_02514 PF10531 SLBB domain CCNA_02516 PF02798 Glutathione S-transferase, N-terminal domain CCNA_02516 PF13410 Glutathione S-transferase, C-terminal domain CCNA_02517 PF11776 Domain of unknown function (DUF3315) CCNA_02518 PF02637 GatB domain CCNA_02518 PF02934 GatB/GatE catalytic domain CCNA_02519 PF01425 Amidase CCNA_02520 PF02686 Glu-tRNAGln amidotransferase C subunit CCNA_02521 PF03652 Uncharacterised protein family (UPF0081) CCNA_02525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCNA_02525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCNA_02526 PF01979 Amidohydrolase family CCNA_02528 PF02660 CCNA_02528 CCNA_02529 PF02481 DNA recombination-mediator protein A CCNA_02530 PF08242 Methyltransferase domain CCNA_02535 PF01131 DNA topoisomerase CCNA_02535 PF01396 CCNA_02535 CCNA_02535 PF01751 Toprim domain CCNA_02535 PF13368 CCNA_02535 CCNA_02537 PF00575 S1 RNA binding domain CCNA_02537 PF00773 RNB domain CCNA_02538 PF13472 GDSL-like Lipase/Acylhydrolase family CCNA_02539 PF00155 Aminotransferase class I and II CCNA_02540 PF01546 Peptidase family M20/M25/M40 CCNA_02540 PF07687 Peptidase dimerisation domain CCNA_02541 PF00293 NUDIX domain CCNA_02543 PF00471 Ribosomal protein L33 CCNA_02545 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CCNA_02546 PF00072 Response regulator receiver domain CCNA_02546 PF00990 GGDEF domain CCNA_02547 PF00072 Response regulator receiver domain CCNA_02549 PF00480 ROK family CCNA_02550 PF00817 impB/mucB/samB family CCNA_02550 PF11799 impB/mucB/samB family C-terminal domain CCNA_02552 PF02617 ATP-dependent Clp protease adaptor protein ClpS CCNA_02553 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_02553 PF02861 Clp amino terminal domain CCNA_02553 PF07724 AAA domain (Cdc48 subfamily) CCNA_02553 PF10431 C-terminal, D2-small domain, of ClpB protein CCNA_02555 PF01230 HIT domain CCNA_02556 PF14117 CCNA_02556 CCNA_02557 PF13622 Thioesterase-like superfamily CCNA_02558 PF01425 Amidase CCNA_02559 PF14534 Domain of unknown function (DUF4440) CCNA_02562 PF08238 Sel1 repeat CCNA_02563 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02563 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_02563 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02564 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_02564 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_02566 PF01433 Peptidase family M1 CCNA_02566 PF11940 Domain of unknown function (DUF3458) CCNA_02567 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02567 PF00989 PAS fold CCNA_02567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02567 PF12860 CCNA_02567 CCNA_02568 PF03308 ArgK protein CCNA_02569 PF13417 Glutathione S-transferase, N-terminal domain CCNA_02570 PF07690 Major Facilitator Superfamily CCNA_02571 PF07690 Major Facilitator Superfamily CCNA_02572 PF00206 Lyase CCNA_02572 PF10397 Adenylosuccinate lyase C-terminus CCNA_02573 PF13661 2OG-Fe(II) oxygenase superfamily CCNA_02574 PF03167 Uracil DNA glycosylase superfamily CCNA_02575 PF07345 Domain of unknown function (DUF1476) CCNA_02576 PF01259 SAICAR synthetase CCNA_02577 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CCNA_02578 PF00440 Bacterial regulatory proteins, tetR family CCNA_02578 PF13977 Bacterial transcriptional repressor CCNA_02579 PF00067 Cytochrome P450 CCNA_02580 PF00301 Rubredoxin CCNA_02581 PF11695 CCNA_02581 CCNA_02583 PF13507 CobB/CobQ-like glutamine amidotransferase domain CCNA_02586 PF00586 AIR synthase related protein, N-terminal domain CCNA_02586 PF02769 AIR synthase related protein, C-terminal domain CCNA_02587 PF00072 Response regulator receiver domain CCNA_02587 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02587 PF00989 PAS fold CCNA_02587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02588 PF04389 Peptidase family M28 CCNA_02589 PF01722 BolA-like protein CCNA_02591 PF00462 Glutaredoxin CCNA_02592 PF13279 Thioesterase-like superfamily CCNA_02594 PF01435 Peptidase family M48 CCNA_02595 PF13453 CCNA_02595 CCNA_02596 PF00163 Ribosomal protein S4/S9 N-terminal domain CCNA_02596 PF01479 S4 domain CCNA_02598 PF05016 Plasmid stabilisation system protein CCNA_02600 PF00756 Putative esterase CCNA_02601 PF00107 Zinc-binding dehydrogenase CCNA_02601 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_02602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_02602 PF03466 LysR substrate binding domain CCNA_02603 PF06742 Protein of unknown function (DUF1214) CCNA_02603 PF06863 Protein of unknown function (DUF1254) CCNA_02604 PF10116 CCNA_02604 CCNA_02605 PF00588 SpoU rRNA Methylase family CCNA_02606 PF00072 Response regulator receiver domain CCNA_02606 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02606 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02607 PF00180 Isocitrate/isopropylmalate dehydrogenase CCNA_02608 PF11159 CCNA_02608 CCNA_02609 PF03547 CCNA_02609 CCNA_02610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_02611 PF06445 GyrI-like small molecule binding domain CCNA_02611 PF12833 Helix-turn-helix domain CCNA_02612 PF01411 tRNA synthetases class II (A) CCNA_02612 PF02272 DHHA1 domain CCNA_02612 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCNA_02613 PF00355 Rieske [2Fe-2S] domain CCNA_02614 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCNA_02615 PF04209 homogentisate 1,2-dioxygenase CCNA_02616 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_02616 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal CCNA_02617 PF00155 Aminotransferase class I and II CCNA_02618 PF01037 AsnC family CCNA_02618 PF13412 Winged helix-turn-helix DNA-binding CCNA_02619 PF01145 SPFH domain / Band 7 family CCNA_02620 PF08922 Domain of unknown function (DUF1905) CCNA_02621 PF02517 CAAX protease self-immunity CCNA_02622 PF05299 M61 glycyl aminopeptidase CCNA_02623 PF00091 Tubulin/FtsZ family, GTPase domain CCNA_02623 PF12327 FtsZ family, C-terminal domain CCNA_02624 PF02491 SHS2 domain inserted in FTSA CCNA_02624 PF14450 Cell division protein FtsA CCNA_02625 PF03799 Cell division protein FtsQ CCNA_02625 PF08478 POTRA domain, FtsQ-type CCNA_02626 PF01820 D-ala D-ala ligase N-terminus CCNA_02626 PF07478 D-ala D-ala ligase C-terminus CCNA_02627 PF04389 Peptidase family M28 CCNA_02628 PF01565 FAD binding domain CCNA_02628 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CCNA_02629 PF01225 Mur ligase family, catalytic domain CCNA_02629 PF02875 Mur ligase family, glutamate ligase domain CCNA_02629 PF08245 Mur ligase middle domain CCNA_02632 PF04832 SOUL heme-binding protein CCNA_02633 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) CCNA_02634 PF03033 Glycosyltransferase family 28 N-terminal domain CCNA_02634 PF04101 Glycosyltransferase family 28 C-terminal domain CCNA_02635 PF01098 CCNA_02635 CCNA_02637 PF07536 CCNA_02637 CCNA_02637 PF08448 PAS fold CCNA_02638 PF00571 CBS domain CCNA_02638 PF00654 Voltage gated chloride channel CCNA_02639 PF08245 Mur ligase middle domain CCNA_02640 PF00953 Glycosyl transferase family 4 CCNA_02641 PF01225 Mur ligase family, catalytic domain CCNA_02641 PF02875 Mur ligase family, glutamate ligase domain CCNA_02641 PF08245 Mur ligase middle domain CCNA_02642 PF01225 Mur ligase family, catalytic domain CCNA_02642 PF02875 Mur ligase family, glutamate ligase domain CCNA_02642 PF08245 Mur ligase middle domain CCNA_02643 PF00905 Penicillin binding protein transpeptidase domain CCNA_02643 PF03717 Penicillin-binding Protein dimerisation domain CCNA_02645 PF01795 MraW methylase family CCNA_02646 PF02381 MraZ protein CCNA_02647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_02647 PF03466 LysR substrate binding domain CCNA_02648 PF12697 Alpha/beta hydrolase family CCNA_02649 PF04299 Putative FMN-binding domain CCNA_02650 PF01471 Putative peptidoglycan binding domain CCNA_02650 PF01510 N-acetylmuramoyl-L-alanine amidase CCNA_02651 PF00892 EamA-like transporter family CCNA_02652 PF00743 Flavin-binding monooxygenase-like CCNA_02652 PF13450 NAD(P)-binding Rossmann-like domain CCNA_02653 PF09995 CCNA_02653 CCNA_02655 PF14534 Domain of unknown function (DUF4440) CCNA_02656 PF12833 Helix-turn-helix domain CCNA_02657 PF11253 CCNA_02657 CCNA_02658 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_02659 PF00072 Response regulator receiver domain CCNA_02660 PF01243 Pyridoxamine 5'-phosphate oxidase CCNA_02661 PF00675 Insulinase (Peptidase family M16) CCNA_02661 PF05193 Peptidase M16 inactive domain CCNA_02662 PF04389 Peptidase family M28 CCNA_02663 PF01258 Prokaryotic dksA/traR C4-type zinc finger CCNA_02664 PF10768 CCNA_02664 CCNA_02665 PF02119 CCNA_02665 CCNA_02666 PF10135 CCNA_02666 CCNA_02668 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CCNA_02669 PF11902 CCNA_02669 CCNA_02670 PF00005 ABC transporter CCNA_02673 PF00005 ABC transporter CCNA_02674 PF13340 CCNA_02674 CCNA_02675 PF13586 CCNA_02675 CCNA_02677 PF00043 Glutathione S-transferase, C-terminal domain CCNA_02677 PF02798 Glutathione S-transferase, N-terminal domain CCNA_02681 PF01134 Glucose inhibited division protein A CCNA_02682 PF07103 CCNA_02682 CCNA_02683 PF01593 Flavin containing amine oxidoreductase CCNA_02684 PF02353 Mycolic acid cyclopropane synthetase CCNA_02685 PF09945 CCNA_02685 CCNA_02686 PF01546 Peptidase family M20/M25/M40 CCNA_02687 PF00266 Aminotransferase class-V CCNA_02688 PF01522 Polysaccharide deacetylase CCNA_02689 PF09349 OHCU decarboxylase CCNA_02690 PF06181 CCNA_02690 CCNA_02691 PF00440 Bacterial regulatory proteins, tetR family CCNA_02692 PF04264 YceI-like domain CCNA_02693 PF00353 Hemolysin-type calcium-binding repeat (2 copies) CCNA_02694 PF03069 Acetamidase/Formamidase family CCNA_02696 PF01425 Amidase CCNA_02697 PF11533 Protein of unknown function (DUF3225) CCNA_02698 PF01156 Inosine-uridine preferring nucleoside hydrolase CCNA_02699 PF01979 Amidohydrolase family CCNA_02700 PF02625 XdhC and CoxI family CCNA_02700 PF13478 XdhC Rossmann domain CCNA_02701 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCNA_02701 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCNA_02702 PF00111 2Fe-2S iron-sulfur cluster binding domain CCNA_02702 PF00941 FAD binding domain in molybdopterin dehydrogenase CCNA_02702 PF01799 [2Fe-2S] binding domain CCNA_02702 PF03450 CO dehydrogenase flavoprotein C-terminal domain CCNA_02703 PF00576 HIUase/Transthyretin family CCNA_02704 PF00390 Malic enzyme, N-terminal domain CCNA_02704 PF01515 Phosphate acetyl/butaryl transferase CCNA_02704 PF03949 Malic enzyme, NAD binding domain CCNA_02705 PF00313 'Cold-shock' DNA-binding domain CCNA_02708 PF02082 Transcriptional regulator CCNA_02709 PF00571 CBS domain CCNA_02710 PF01694 Rhomboid family CCNA_02712 PF03783 Curli production assembly/transport component CsgG CCNA_02714 PF00005 ABC transporter CCNA_02714 PF16326 CCNA_02714 CCNA_02715 PF00072 Response regulator receiver domain CCNA_02715 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02715 PF05231 CCNA_02715 CCNA_02716 PF09084 NMT1/THI5 like CCNA_02717 PF00005 ABC transporter CCNA_02718 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_02720 PF10098 CCNA_02720 CCNA_02721 PF00675 Insulinase (Peptidase family M16) CCNA_02721 PF05193 Peptidase M16 inactive domain CCNA_02723 PF07310 CCNA_02723 CCNA_02724 PF00248 Aldo/keto reductase family CCNA_02725 PF00732 GMC oxidoreductase CCNA_02725 PF05199 GMC oxidoreductase CCNA_02726 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_02727 PF02562 PhoH-like protein CCNA_02729 PF03169 CCNA_02729 CCNA_02730 PF13410 Glutathione S-transferase, C-terminal domain CCNA_02730 PF13417 Glutathione S-transferase, N-terminal domain CCNA_02731 PF08445 FR47-like protein CCNA_02732 PF11324 CCNA_02732 CCNA_02733 PF05096 Glutamine cyclotransferase CCNA_02734 PF00132 Bacterial transferase hexapeptide (six repeats) CCNA_02734 PF06426 Serine acetyltransferase, N-terminal CCNA_02735 PF00293 NUDIX domain CCNA_02736 PF00881 Nitroreductase family CCNA_02737 PF14489 QueF-like protein CCNA_02738 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_02739 PF00665 Integrase core domain CCNA_02739 PF13565 CCNA_02739 CCNA_02740 PF01527 Transposase CCNA_02741 PF09694 CCNA_02741 CCNA_02742 PF07690 Major Facilitator Superfamily CCNA_02743 PF00593 TonB dependent receptor CCNA_02743 PF07715 TonB-dependent Receptor Plug Domain CCNA_02744 PF00392 Bacterial regulatory proteins, gntR family CCNA_02744 PF07729 FCD domain CCNA_02745 PF00440 Bacterial regulatory proteins, tetR family CCNA_02747 PF03180 NLPA lipoprotein CCNA_02750 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_02751 PF00005 ABC transporter CCNA_02751 PF09383 NIL domain CCNA_02752 PF00072 Response regulator receiver domain CCNA_02752 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02752 PF08448 PAS fold CCNA_02752 PF13185 GAF domain CCNA_02753 PF00326 Prolyl oligopeptidase family CCNA_02753 PF07676 WD40-like Beta Propeller Repeat CCNA_02754 PF01979 Amidohydrolase family CCNA_02755 PF13560 Helix-turn-helix domain CCNA_02756 PF00994 Probable molybdopterin binding domain CCNA_02757 PF03749 Sugar fermentation stimulation protein CCNA_02759 PF00557 Metallopeptidase family M24 CCNA_02762 PF04002 RadC-like JAB domain CCNA_02762 PF12826 Helix-hairpin-helix motif CCNA_02763 PF00589 Phage integrase family CCNA_02765 PF05284 CCNA_02765 CCNA_02766 PF10038 CCNA_02766 CCNA_02767 PF03743 Bacterial conjugation TrbI-like protein CCNA_02768 PF03524 Conjugal transfer protein CCNA_02769 PF04335 VirB8 protein CCNA_02770 PF04610 CCNA_02770 CCNA_02771 PF01527 Transposase CCNA_02772 PF13276 CCNA_02772 CCNA_02772 PF13683 CCNA_02772 CCNA_02773 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02776 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCNA_02776 PF07685 CobB/CobQ-like glutamine amidotransferase domain CCNA_02779 PF01476 LysM domain CCNA_02779 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) CCNA_02783 PF00211 Adenylate and Guanylate cyclase catalytic domain CCNA_02785 PF00027 Cyclic nucleotide-binding domain CCNA_02785 PF10137 CCNA_02785 CCNA_02786 PF00211 Adenylate and Guanylate cyclase catalytic domain CCNA_02788 PF01381 Helix-turn-helix CCNA_02789 PF13560 Helix-turn-helix domain CCNA_02790 PF04542 Sigma-70 region 2 CCNA_02790 PF08281 Sigma-70, region 4 CCNA_02791 PF04773 FecR protein CCNA_02791 PF16220 CCNA_02791 CCNA_02792 PF00593 TonB dependent receptor CCNA_02792 PF07715 TonB-dependent Receptor Plug Domain CCNA_02793 PF00326 Prolyl oligopeptidase family CCNA_02794 PF00733 Asparagine synthase CCNA_02795 PF13471 CCNA_02795 CCNA_02798 PF00392 Bacterial regulatory proteins, gntR family CCNA_02801 PF10074 CCNA_02801 CCNA_02802 PF10074 CCNA_02802 CCNA_02806 PF02321 Outer membrane efflux protein CCNA_02807 PF16576 CCNA_02807 CCNA_02809 PF00873 AcrB/AcrD/AcrF family CCNA_02810 PF02641 Uncharacterized ACR, COG1993 CCNA_02811 PF00122 E1-E2 ATPase CCNA_02811 PF00702 haloacid dehalogenase-like hydrolase CCNA_02812 PF00462 Glutaredoxin CCNA_02813 PF01527 Transposase CCNA_02814 PF00665 Integrase core domain CCNA_02814 PF13565 CCNA_02814 CCNA_02820 PF13400 CCNA_02820 CCNA_02820 PF16190 CCNA_02820 CCNA_02821 PF07804 HipA-like C-terminal domain CCNA_02821 PF07805 HipA-like N-terminal domain CCNA_02821 PF13657 HipA N-terminal domain CCNA_02822 PF13560 Helix-turn-helix domain CCNA_02825 PF13610 CCNA_02825 CCNA_02826 PF01548 CCNA_02826 CCNA_02826 PF02371 CCNA_02826 CCNA_02827 PF01527 Transposase CCNA_02828 PF13276 CCNA_02828 CCNA_02828 PF13683 CCNA_02828 CCNA_02829 PF00082 Subtilase family CCNA_02830 PF04002 RadC-like JAB domain CCNA_02831 PF10030 CCNA_02831 CCNA_02832 PF01244 Membrane dipeptidase (Peptidase family M19) CCNA_02833 PF01794 CCNA_02833 CCNA_02834 PF00174 Oxidoreductase molybdopterin binding domain CCNA_02835 PF13801 Heavy-metal resistance CCNA_02837 PF04542 Sigma-70 region 2 CCNA_02837 PF08281 Sigma-70, region 4 CCNA_02838 PF13202 EF hand CCNA_02838 PF13499 EF-hand domain pair CCNA_02839 PF03710 Glutamate-ammonia ligase adenylyltransferase CCNA_02839 PF08335 GlnD PII-uridylyltransferase CCNA_02840 PF05569 BlaR1 peptidase M56 CCNA_02842 PF00672 HAMP domain CCNA_02842 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02843 PF05016 Plasmid stabilisation system protein CCNA_02845 PF00072 Response regulator receiver domain CCNA_02845 PF00486 Transcriptional regulatory protein, C terminal CCNA_02846 PF13180 PDZ domain CCNA_02846 PF13365 Trypsin-like peptidase domain CCNA_02847 PF03918 Cytochrome C biogenesis protein CCNA_02848 PF01578 CCNA_02848 CCNA_02848 PF16327 CCNA_02848 CCNA_02849 PF03100 CcmE CCNA_02851 PF12697 Alpha/beta hydrolase family CCNA_02853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02853 PF08521 CCNA_02853 CCNA_02854 PF00072 Response regulator receiver domain CCNA_02854 PF00486 Transcriptional regulatory protein, C terminal CCNA_02858 PF07804 HipA-like C-terminal domain CCNA_02858 PF07805 HipA-like N-terminal domain CCNA_02858 PF13657 HipA N-terminal domain CCNA_02859 PF01381 Helix-turn-helix CCNA_02860 PF00226 DnaJ domain CCNA_02860 PF01556 DnaJ C terminal domain CCNA_02861 PF13547 CCNA_02861 CCNA_02861 PF13550 CCNA_02861 CCNA_02863 PF00877 NlpC/P60 family CCNA_02864 PF09356 CCNA_02864 CCNA_02864 PF09931 CCNA_02864 CCNA_02865 PF09343 CCNA_02865 CCNA_02866 PF05656 CCNA_02866 CCNA_02868 PF09550 CCNA_02868 CCNA_02869 PF11836 CCNA_02869 CCNA_02870 PF06199 CCNA_02870 CCNA_02871 PF11367 Protein of unknown function (DUF3168) CCNA_02872 PF05065 Phage capsid family CCNA_02874 PF04586 CCNA_02874 CCNA_02876 PF04480 Protein of unknown function (DUF559) CCNA_02877 PF04860 Phage portal protein CCNA_02880 PF03237 Terminase-like family CCNA_02881 PF00171 Aldehyde dehydrogenase family CCNA_02882 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCNA_02883 PF01593 Flavin containing amine oxidoreductase CCNA_02884 PF00440 Bacterial regulatory proteins, tetR family CCNA_02884 PF08362 YcdC-like protein, C-terminal region CCNA_02885 PF00857 Isochorismatase family CCNA_02886 PF01042 Endoribonuclease L-PSP CCNA_02887 PF00561 alpha/beta hydrolase fold CCNA_02888 PF00296 Luciferase-like monooxygenase CCNA_02889 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCNA_02889 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCNA_02891 PF02449 Beta-galactosidase CCNA_02893 PF04616 Glycosyl hydrolases family 43 CCNA_02894 PF00331 Glycosyl hydrolase family 10 CCNA_02895 PF00593 TonB dependent receptor CCNA_02895 PF07715 TonB-dependent Receptor Plug Domain CCNA_02896 PF04820 Tryptophan halogenase CCNA_02897 PF04820 Tryptophan halogenase CCNA_02898 PF04820 Tryptophan halogenase CCNA_02899 PF04820 Tryptophan halogenase CCNA_02900 PF01546 Peptidase family M20/M25/M40 CCNA_02900 PF07687 Peptidase dimerisation domain CCNA_02901 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02901 PF13426 PAS domain CCNA_02902 PF03648 Glycosyl hydrolase family 67 N-terminus CCNA_02902 PF07477 Glycosyl hydrolase family 67 C-terminus CCNA_02902 PF07488 Glycosyl hydrolase family 67 middle domain CCNA_02903 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCNA_02903 PF13378 Enolase C-terminal domain-like CCNA_02904 PF00392 Bacterial regulatory proteins, gntR family CCNA_02904 PF07729 FCD domain CCNA_02905 PF04480 Protein of unknown function (DUF559) CCNA_02906 PF01757 CCNA_02906 CCNA_02907 PF01548 CCNA_02907 CCNA_02907 PF02371 CCNA_02907 CCNA_02908 PF13419 Haloacid dehalogenase-like hydrolase CCNA_02909 PF13432 Tetratricopeptide repeat CCNA_02909 PF13759 Putative 2OG-Fe(II) oxygenase CCNA_02910 PF00593 TonB dependent receptor CCNA_02910 PF07715 TonB-dependent Receptor Plug Domain CCNA_02912 PF13661 2OG-Fe(II) oxygenase superfamily CCNA_02914 PF01523 Putative modulator of DNA gyrase CCNA_02915 PF01523 Putative modulator of DNA gyrase CCNA_02916 PF13709 Domain of unknown function (DUF4159) CCNA_02917 PF07726 ATPase family associated with various cellular activities (AAA) CCNA_02918 PF01882 CCNA_02918 CCNA_02919 PF07584 CCNA_02919 CCNA_02920 PF13779 CCNA_02920 CCNA_02923 PF00593 TonB dependent receptor CCNA_02923 PF07715 TonB-dependent Receptor Plug Domain CCNA_02924 PF06906 CCNA_02924 CCNA_02925 PF00117 Glutamine amidotransferase class-I CCNA_02925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CCNA_02927 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_02929 PF00107 Zinc-binding dehydrogenase CCNA_02929 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_02929 PF13823 Alcohol dehydrogenase GroES-associated CCNA_02930 PF04480 Protein of unknown function (DUF559) CCNA_02931 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCNA_02933 PF02225 PA domain CCNA_02933 PF04389 Peptidase family M28 CCNA_02934 PF06197 CCNA_02934 CCNA_02935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02935 PF00672 HAMP domain CCNA_02935 PF02743 Cache domain CCNA_02936 PF00043 Glutathione S-transferase, C-terminal domain CCNA_02936 PF02798 Glutathione S-transferase, N-terminal domain CCNA_02938 PF00691 OmpA family CCNA_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_02941 PF01272 Transcription elongation factor, GreA/GreB, C-term CCNA_02941 PF03449 Transcription elongation factor, N-terminal CCNA_02942 PF06258 CCNA_02942 CCNA_02945 PF00072 Response regulator receiver domain CCNA_02945 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02945 PF08448 PAS fold CCNA_02945 PF12860 CCNA_02945 CCNA_02946 PF02348 Cytidylyltransferase CCNA_02949 PF13489 Methyltransferase domain CCNA_02951 PF08889 CCNA_02951 CCNA_02953 PF02485 Core-2/I-Branching enzyme CCNA_02954 PF00106 short chain dehydrogenase CCNA_02955 PF01925 CCNA_02955 CCNA_02956 PF00581 Rhodanese-like domain CCNA_02956 PF11127 Protein of unknown function (DUF2892) CCNA_02957 PF01022 Bacterial regulatory protein, arsR family CCNA_02959 PF00753 Metallo-beta-lactamase superfamily CCNA_02960 PF01381 Helix-turn-helix CCNA_02961 PF03102 NeuB family CCNA_02961 PF08666 SAF domain CCNA_02962 PF15919 CCNA_02962 CCNA_02964 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_02965 PF07486 Cell Wall Hydrolase CCNA_02966 PF00210 Ferritin-like domain CCNA_02967 PF00072 Response regulator receiver domain CCNA_02967 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02967 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02967 PF08447 PAS fold CCNA_02969 PF00440 Bacterial regulatory proteins, tetR family CCNA_02970 PF04134 CCNA_02970 CCNA_02971 PF01594 CCNA_02971 CCNA_02972 PF13759 Putative 2OG-Fe(II) oxygenase CCNA_02974 PF05016 Plasmid stabilisation system protein CCNA_02975 PF01541 GIY-YIG catalytic domain CCNA_02975 PF02151 UvrB/uvrC motif CCNA_02975 PF08459 UvrC Helix-hairpin-helix N-terminal CCNA_02975 PF14520 Helix-hairpin-helix domain CCNA_02976 PF13682 Chemoreceptor zinc-binding domain CCNA_02977 PF04542 Sigma-70 region 2 CCNA_02977 PF08281 Sigma-70, region 4 CCNA_02978 PF00512 His Kinase A (phospho-acceptor) domain CCNA_02978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_02979 PF00266 Aminotransferase class-V CCNA_02980 PF03301 Tryptophan 2,3-dioxygenase CCNA_02981 PF01037 AsnC family CCNA_02981 PF13412 Winged helix-turn-helix DNA-binding CCNA_02982 PF04966 Carbohydrate-selective porin, OprB family CCNA_02983 PF00535 Glycosyl transferase family 2 CCNA_02984 PF04138 CCNA_02984 CCNA_02985 PF13489 Methyltransferase domain CCNA_02991 PF13586 CCNA_02991 CCNA_02992 PF10027 CCNA_02992 CCNA_02993 PF13460 NADH(P)-binding CCNA_02993 PF13781 CCNA_02993 CCNA_02994 PF02142 MGS-like domain CCNA_02994 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_02994 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCNA_02995 PF00043 Glutathione S-transferase, C-terminal domain CCNA_02995 PF02798 Glutathione S-transferase, N-terminal domain CCNA_02996 PF01734 Patatin-like phospholipase CCNA_02997 PF00313 'Cold-shock' DNA-binding domain CCNA_02999 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) CCNA_03000 PF05114 Protein of unknown function (DUF692) CCNA_03002 PF01066 CDP-alcohol phosphatidyltransferase CCNA_03003 PF00672 HAMP domain CCNA_03003 PF07536 CCNA_03003 CCNA_03006 PF02445 Quinolinate synthetase A protein CCNA_03007 PF00890 FAD binding domain CCNA_03007 PF02910 Fumarate reductase flavoprotein C-term CCNA_03008 PF05685 Putative restriction endonuclease CCNA_03009 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CCNA_03009 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CCNA_03010 PF01124 MAPEG family CCNA_03011 PF08212 Lipocalin-like domain CCNA_03012 PF00578 AhpC/TSA family CCNA_03012 PF10417 C-terminal domain of 1-Cys peroxiredoxin CCNA_03013 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_03013 PF13192 Thioredoxin domain CCNA_03016 PF00196 Bacterial regulatory proteins, luxR family CCNA_03017 PF01292 Prokaryotic cytochrome b561 CCNA_03018 PF01548 CCNA_03018 CCNA_03018 PF02371 CCNA_03018 CCNA_03019 PF00593 TonB dependent receptor CCNA_03019 PF07715 TonB-dependent Receptor Plug Domain CCNA_03020 PF16670 CCNA_03020 CCNA_03022 PF03929 CCNA_03022 CCNA_03023 PF00593 TonB dependent receptor CCNA_03023 PF07715 TonB-dependent Receptor Plug Domain CCNA_03024 PF01063 Aminotransferase class IV CCNA_03025 PF12802 MarR family CCNA_03026 PF00072 Response regulator receiver domain CCNA_03026 PF00486 Transcriptional regulatory protein, C terminal CCNA_03027 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03027 PF00672 HAMP domain CCNA_03027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03028 PF00800 Prephenate dehydratase CCNA_03029 PF02348 Cytidylyltransferase CCNA_03030 PF00034 Cytochrome c CCNA_03031 PF00877 NlpC/P60 family CCNA_03032 PF00883 Cytosol aminopeptidase family, catalytic domain CCNA_03035 PF00482 Type II secretion system (T2SS), protein F CCNA_03036 PF00482 Type II secretion system (T2SS), protein F CCNA_03037 PF00437 Type II/IV secretion system protein CCNA_03038 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCNA_03039 PF09476 CCNA_03039 CCNA_03040 PF00263 CCNA_03040 CCNA_03040 PF04972 BON domain CCNA_03040 PF13629 CCNA_03040 CCNA_03041 PF08666 SAF domain CCNA_03041 PF16976 CCNA_03041 CCNA_03042 PF01478 Type IV leader peptidase family CCNA_03043 PF04964 CCNA_03043 CCNA_03044 PF13629 CCNA_03044 CCNA_03045 PF07811 CCNA_03045 CCNA_03046 PF07811 CCNA_03046 CCNA_03047 PF01063 Aminotransferase class IV CCNA_03048 PF00425 chorismate binding enzyme CCNA_03048 PF04715 Anthranilate synthase component I, N terminal region CCNA_03049 PF11700 CCNA_03049 CCNA_03050 PF13350 Tyrosine phosphatase family CCNA_03052 PF01757 CCNA_03052 CCNA_03053 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CCNA_03054 PF01965 DJ-1/PfpI family CCNA_03054 PF12833 Helix-turn-helix domain CCNA_03055 PF01965 DJ-1/PfpI family CCNA_03056 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain CCNA_03057 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_03058 PF00795 Carbon-nitrogen hydrolase CCNA_03059 PF06210 CCNA_03059 CCNA_03060 PF07411 Domain of unknown function (DUF1508) CCNA_03061 PF00106 short chain dehydrogenase CCNA_03062 PF07486 Cell Wall Hydrolase CCNA_03064 PF03551 Transcriptional regulator PadR-like family CCNA_03065 PF00034 Cytochrome c CCNA_03066 PF00072 Response regulator receiver domain CCNA_03066 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03066 PF01590 GAF domain CCNA_03066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03066 PF08448 PAS fold CCNA_03067 PF01638 HxlR-like helix-turn-helix CCNA_03068 PF02798 Glutathione S-transferase, N-terminal domain CCNA_03068 PF13410 Glutathione S-transferase, C-terminal domain CCNA_03069 PF12893 Putative lumazine-binding CCNA_03070 PF01361 Tautomerase enzyme CCNA_03071 PF00669 Bacterial flagellin N-terminal helical region CCNA_03071 PF00700 Bacterial flagellin C-terminal helical region CCNA_03072 PF00440 Bacterial regulatory proteins, tetR family CCNA_03072 PF16859 CCNA_03072 CCNA_03073 PF11911 CCNA_03073 CCNA_03074 PF00106 short chain dehydrogenase CCNA_03075 PF08220 DeoR-like helix-turn-helix domain CCNA_03076 PF00271 Helicase conserved C-terminal domain CCNA_03076 PF02151 UvrB/uvrC motif CCNA_03076 PF04851 Type III restriction enzyme, res subunit CCNA_03076 PF12344 Ultra-violet resistance protein B CCNA_03078 PF09957 CCNA_03078 CCNA_03079 PF05016 Plasmid stabilisation system protein CCNA_03080 PF03693 Uncharacterised protein family (UPF0156) CCNA_03081 PF07007 Protein of unknown function (DUF1311) CCNA_03083 PF00072 Response regulator receiver domain CCNA_03083 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03084 PF07786 CCNA_03084 CCNA_03085 PF03060 Nitronate monooxygenase CCNA_03086 PF07007 Protein of unknown function (DUF1311) CCNA_03087 PF07700 Heme NO binding CCNA_03088 PF00072 Response regulator receiver domain CCNA_03088 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03088 PF13185 GAF domain CCNA_03089 PF07007 Protein of unknown function (DUF1311) CCNA_03090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCNA_03092 PF00067 Cytochrome P450 CCNA_03093 PF02566 OsmC-like protein CCNA_03094 PF03328 HpcH/HpaI aldolase/citrate lyase family CCNA_03095 PF00924 Mechanosensitive ion channel CCNA_03096 PF00593 TonB dependent receptor CCNA_03096 PF07715 TonB-dependent Receptor Plug Domain CCNA_03097 PF00248 Aldo/keto reductase family CCNA_03100 PF03831 PhnA protein CCNA_03101 PF00589 Phage integrase family CCNA_03101 PF02899 Phage integrase, N-terminal SAM-like domain CCNA_03103 PF01202 Shikimate kinase CCNA_03104 PF01761 3-dehydroquinate synthase CCNA_03105 PF00226 DnaJ domain CCNA_03106 PF01722 BolA-like protein CCNA_03107 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCNA_03108 PF00593 TonB dependent receptor CCNA_03108 PF07715 TonB-dependent Receptor Plug Domain CCNA_03110 PF00072 Response regulator receiver domain CCNA_03112 PF00571 CBS domain CCNA_03112 PF01595 CCNA_03112 CCNA_03112 PF03471 Transporter associated domain CCNA_03113 PF01569 PAP2 superfamily CCNA_03115 PF07728 AAA domain (dynein-related subfamily) CCNA_03115 PF12556 CCNA_03115 CCNA_03117 PF04519 CCNA_03117 CCNA_03120 PF01584 CheW-like domain CCNA_03122 PF13630 CCNA_03122 CCNA_03123 PF12840 Helix-turn-helix domain CCNA_03124 PF00107 Zinc-binding dehydrogenase CCNA_03124 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_03125 PF13347 MFS/sugar transport protein CCNA_03126 PF04185 Phosphoesterase family CCNA_03126 PF05506 CCNA_03126 CCNA_03127 PF01546 Peptidase family M20/M25/M40 CCNA_03127 PF07687 Peptidase dimerisation domain CCNA_03128 PF00892 EamA-like transporter family CCNA_03129 PF01551 Peptidase family M23 CCNA_03130 PF00072 Response regulator receiver domain CCNA_03130 PF00486 Transcriptional regulatory protein, C terminal CCNA_03131 PF04397 LytTr DNA-binding domain CCNA_03134 PF03403 Platelet-activating factor acetylhydrolase, isoform II CCNA_03135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCNA_03135 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCNA_03137 PF00331 Glycosyl hydrolase family 10 CCNA_03138 PF00141 Peroxidase CCNA_03139 PF00920 Dehydratase family CCNA_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_03140 PF03466 LysR substrate binding domain CCNA_03141 PF13740 ACT domain CCNA_03142 PF00140 Sigma-70 factor, region 1 CCNA_03142 PF03979 Sigma-70 factor, region 1 CCNA_03142 PF04539 Sigma-70 region 3 CCNA_03142 PF04542 Sigma-70 region 2 CCNA_03142 PF04545 Sigma-70, region 4 CCNA_03142 PF04546 Sigma-70, non-essential region CCNA_03143 PF00989 PAS fold CCNA_03143 PF07536 CCNA_03143 CCNA_03143 PF08447 PAS fold CCNA_03144 PF01807 CHC2 zinc finger CCNA_03144 PF08275 DNA primase catalytic core, N-terminal domain CCNA_03144 PF13155 Toprim-like CCNA_03146 PF05299 M61 glycyl aminopeptidase CCNA_03148 PF05960 Bacterial protein of unknown function (DUF885) CCNA_03149 PF00933 Glycosyl hydrolase family 3 N terminal domain CCNA_03149 PF01915 Glycosyl hydrolase family 3 C-terminal domain CCNA_03149 PF14310 Fibronectin type III-like domain CCNA_03151 PF03629 Domain of unknown function (DUF303) CCNA_03153 PF10014 2OG-Fe dioxygenase CCNA_03154 PF00072 Response regulator receiver domain CCNA_03154 PF07536 CCNA_03154 CCNA_03154 PF08448 PAS fold CCNA_03155 PF16357 CCNA_03155 CCNA_03156 PF10029 CCNA_03156 CCNA_03157 PF10670 CCNA_03157 CCNA_03158 PF02424 ApbE family CCNA_03159 PF00175 Oxidoreductase NAD-binding domain CCNA_03159 PF00258 Flavodoxin CCNA_03160 PF12804 MobA-like NTP transferase domain CCNA_03161 PF00356 Bacterial regulatory proteins, lacI family CCNA_03161 PF13377 Periplasmic binding protein-like domain CCNA_03162 PF01960 ArgJ family CCNA_03163 PF13616 PPIC-type PPIASE domain CCNA_03164 PF01043 SecA preprotein cross-linking domain CCNA_03164 PF02810 SEC-C motif CCNA_03164 PF07516 SecA Wing and Scaffold domain CCNA_03164 PF07517 SecA DEAD-like domain CCNA_03165 PF07690 Major Facilitator Superfamily CCNA_03166 PF12840 Helix-turn-helix domain CCNA_03169 PF08239 Bacterial SH3 domain CCNA_03169 PF13488 CCNA_03169 CCNA_03170 PF02517 CAAX protease self-immunity CCNA_03171 PF00072 Response regulator receiver domain CCNA_03171 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03171 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03172 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_03173 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CCNA_03174 PF07690 Major Facilitator Superfamily CCNA_03175 PF01934 Protein of unknown function DUF86 CCNA_03176 PF01909 Nucleotidyltransferase domain CCNA_03177 PF01642 Methylmalonyl-CoA mutase CCNA_03177 PF02310 B12 binding domain CCNA_03178 PF00376 MerR family regulatory protein CCNA_03178 PF09278 MerR, DNA binding CCNA_03179 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCNA_03180 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_03181 PF00107 Zinc-binding dehydrogenase CCNA_03181 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_03183 PF00144 Beta-lactamase CCNA_03183 PF11954 CCNA_03183 CCNA_03184 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_03184 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_03184 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_03185 PF00043 Glutathione S-transferase, C-terminal domain CCNA_03185 PF02798 Glutathione S-transferase, N-terminal domain CCNA_03186 PF11017 CCNA_03186 CCNA_03187 PF00892 EamA-like transporter family CCNA_03188 PF06441 Epoxide hydrolase N terminus CCNA_03189 PF04828 Glutathione-dependent formaldehyde-activating enzyme CCNA_03190 PF01212 Beta-eliminating lyase CCNA_03191 PF00563 EAL domain CCNA_03191 PF00990 GGDEF domain CCNA_03191 PF08448 PAS fold CCNA_03192 PF02627 Carboxymuconolactone decarboxylase family CCNA_03193 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_03194 PF04020 CCNA_03194 CCNA_03195 PF00140 Sigma-70 factor, region 1 CCNA_03195 PF04542 Sigma-70 region 2 CCNA_03195 PF04545 Sigma-70, region 4 CCNA_03197 PF12146 Putative lysophospholipase CCNA_03198 PF00072 Response regulator receiver domain CCNA_03200 PF00072 Response regulator receiver domain CCNA_03200 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03201 PF00709 Adenylosuccinate synthetase CCNA_03202 PF09411 Lipid A 3-O-deacylase (PagL) CCNA_03203 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_03204 PF01168 Alanine racemase, N-terminal domain CCNA_03204 PF14031 Putative serine dehydratase domain CCNA_03205 PF02225 PA domain CCNA_03205 PF04389 Peptidase family M28 CCNA_03206 PF03313 CCNA_03206 CCNA_03206 PF03315 Serine dehydratase beta chain CCNA_03207 PF01904 Protein of unknown function DUF72 CCNA_03208 PF06966 CCNA_03208 CCNA_03209 PF00108 Thiolase, N-terminal domain CCNA_03209 PF02803 Thiolase, C-terminal domain CCNA_03210 PF01638 HxlR-like helix-turn-helix CCNA_03211 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCNA_03211 PF13378 Enolase C-terminal domain-like CCNA_03213 PF09650 CCNA_03213 CCNA_03214 PF06170 CCNA_03214 CCNA_03215 PF00155 Aminotransferase class I and II CCNA_03215 PF00392 Bacterial regulatory proteins, gntR family CCNA_03217 PF00440 Bacterial regulatory proteins, tetR family CCNA_03217 PF13305 WHG domain CCNA_03218 PF16576 CCNA_03218 CCNA_03219 PF00873 AcrB/AcrD/AcrF family CCNA_03221 PF01593 Flavin containing amine oxidoreductase CCNA_03222 PF00355 Rieske [2Fe-2S] domain CCNA_03222 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CCNA_03223 PF00440 Bacterial regulatory proteins, tetR family CCNA_03223 PF13977 Bacterial transcriptional repressor CCNA_03225 PF01979 Amidohydrolase family CCNA_03226 PF13520 Amino acid permease CCNA_03227 PF00593 TonB dependent receptor CCNA_03227 PF07715 TonB-dependent Receptor Plug Domain CCNA_03228 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 CCNA_03228 PF13181 Tetratricopeptide repeat CCNA_03228 PF13432 Tetratricopeptide repeat CCNA_03228 PF13469 Sulfotransferase family CCNA_03229 PF01266 FAD dependent oxidoreductase CCNA_03230 PF00120 Glutamine synthetase, catalytic domain CCNA_03232 PF05016 Plasmid stabilisation system protein CCNA_03233 PF00202 Aminotransferase class-III CCNA_03234 PF07722 Peptidase C26 CCNA_03235 PF00005 ABC transporter CCNA_03235 PF08402 TOBE domain CCNA_03236 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_03238 PF00528 Binding-protein-dependent transport system inner membrane component CCNA_03239 PF13416 Bacterial extracellular solute-binding protein CCNA_03240 PF00120 Glutamine synthetase, catalytic domain CCNA_03241 PF00202 Aminotransferase class-III CCNA_03242 PF00171 Aldehyde dehydrogenase family CCNA_03243 PF00171 Aldehyde dehydrogenase family CCNA_03244 PF00392 Bacterial regulatory proteins, gntR family CCNA_03244 PF07729 FCD domain CCNA_03245 PF00202 Aminotransferase class-III CCNA_03246 PF10094 CCNA_03246 CCNA_03247 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_03247 PF00672 HAMP domain CCNA_03247 PF05227 CHASE3 domain CCNA_03248 PF00593 TonB dependent receptor CCNA_03248 PF07715 TonB-dependent Receptor Plug Domain CCNA_03249 PF00593 TonB dependent receptor CCNA_03249 PF07715 TonB-dependent Receptor Plug Domain CCNA_03250 PF00563 EAL domain CCNA_03252 PF03965 Penicillinase repressor CCNA_03253 PF05569 BlaR1 peptidase M56 CCNA_03255 PF02452 PemK-like protein CCNA_03256 PF01264 Chorismate synthase CCNA_03257 PF00072 Response regulator receiver domain CCNA_03259 PF07883 Cupin domain CCNA_03260 PF01242 6-pyruvoyl tetrahydropterin synthase CCNA_03261 PF13394 4Fe-4S single cluster domain CCNA_03262 PF06508 Queuosine biosynthesis protein QueC CCNA_03263 PF07715 TonB-dependent Receptor Plug Domain CCNA_03265 PF00072 Response regulator receiver domain CCNA_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03266 PF06127 CCNA_03266 CCNA_03267 PF01381 Helix-turn-helix CCNA_03268 PF07238 PilZ domain CCNA_03269 PF02685 Glucokinase CCNA_03270 PF01037 AsnC family CCNA_03270 PF13412 Winged helix-turn-helix DNA-binding CCNA_03271 PF01053 Cys/Met metabolism PLP-dependent enzyme CCNA_03272 PF00989 PAS fold CCNA_03272 PF07536 CCNA_03272 CCNA_03272 PF08448 PAS fold CCNA_03273 PF06532 CCNA_03273 CCNA_03276 PF03009 Glycerophosphoryl diester phosphodiesterase family CCNA_03276 PF16387 CCNA_03276 CCNA_03277 PF00534 Glycosyl transferases group 1 CCNA_03278 PF01266 FAD dependent oxidoreductase CCNA_03279 PF00106 short chain dehydrogenase CCNA_03280 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CCNA_03280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCNA_03281 PF01037 AsnC family CCNA_03281 PF13412 Winged helix-turn-helix DNA-binding CCNA_03282 PF02678 Pirin CCNA_03282 PF05726 Pirin C-terminal cupin domain CCNA_03283 PF04909 Amidohydrolase CCNA_03284 PF00962 Adenosine/AMP deaminase CCNA_03285 PF01544 CorA-like Mg2+ transporter protein CCNA_03287 PF03551 Transcriptional regulator PadR-like family CCNA_03288 PF07927 YcfA-like protein CCNA_03289 PF15919 CCNA_03289 CCNA_03290 PF09965 CCNA_03290 CCNA_03291 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCNA_03292 PF00501 AMP-binding enzyme CCNA_03292 PF13193 AMP-binding enzyme C-terminal domain CCNA_03293 PF00378 Enoyl-CoA hydratase/isomerase family CCNA_03293 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCNA_03293 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCNA_03294 PF00144 Beta-lactamase CCNA_03295 PF00072 Response regulator receiver domain CCNA_03295 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03295 PF08447 PAS fold CCNA_03296 PF00440 Bacterial regulatory proteins, tetR family CCNA_03298 PF00593 TonB dependent receptor CCNA_03298 PF07715 TonB-dependent Receptor Plug Domain CCNA_03299 PF02321 Outer membrane efflux protein CCNA_03300 PF16576 CCNA_03300 CCNA_03301 PF00873 AcrB/AcrD/AcrF family CCNA_03302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03302 PF07568 CCNA_03302 CCNA_03302 PF13493 Domain of unknown function (DUF4118) CCNA_03303 PF00009 Elongation factor Tu GTP binding domain CCNA_03303 PF03143 Elongation factor Tu C-terminal domain CCNA_03303 PF03144 Elongation factor Tu domain 2 CCNA_03304 PF00009 Elongation factor Tu GTP binding domain CCNA_03304 PF00679 Elongation factor G C-terminus CCNA_03304 PF03144 Elongation factor Tu domain 2 CCNA_03304 PF03764 Elongation factor G, domain IV CCNA_03304 PF14492 Elongation Factor G, domain II CCNA_03305 PF00177 Ribosomal protein S7p/S5e CCNA_03306 PF00164 Ribosomal protein S12/S23 CCNA_03309 PF00561 alpha/beta hydrolase fold CCNA_03310 PF00467 KOW motif CCNA_03310 PF02357 Transcription termination factor nusG CCNA_03311 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CCNA_03314 PF00175 Oxidoreductase NAD-binding domain CCNA_03315 PF00994 Probable molybdopterin binding domain CCNA_03315 PF03453 MoeA N-terminal region (domain I and II) CCNA_03315 PF03454 MoeA C-terminal region (domain IV) CCNA_03316 PF02719 Polysaccharide biosynthesis protein CCNA_03317 PF01336 OB-fold nucleic acid binding domain CCNA_03317 PF02811 PHP domain CCNA_03317 PF07733 Bacterial DNA polymerase III alpha subunit CCNA_03317 PF14579 Helix-hairpin-helix motif CCNA_03320 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CCNA_03320 PF00364 Biotin-requiring enzyme CCNA_03320 PF01039 Carboxyl transferase domain CCNA_03320 PF02785 Biotin carboxylase C-terminal domain CCNA_03320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCNA_03322 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCNA_03322 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCNA_03323 PF00266 Aminotransferase class-V CCNA_03326 PF00072 Response regulator receiver domain CCNA_03326 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03328 PF02567 Phenazine biosynthesis-like protein CCNA_03330 PF06042 Bacterial protein of unknown function (DUF925) CCNA_03331 PF08543 Phosphomethylpyrimidine kinase CCNA_03332 PF00809 Pterin binding enzyme CCNA_03333 PF00072 Response regulator receiver domain CCNA_03333 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03333 PF08448 PAS fold CCNA_03334 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_03334 PF01434 Peptidase family M41 CCNA_03334 PF06480 FtsH Extracellular CCNA_03335 PF01171 PP-loop family CCNA_03336 PF13174 Tetratricopeptide repeat CCNA_03336 PF13432 Tetratricopeptide repeat CCNA_03337 PF00691 OmpA family CCNA_03338 PF04052 TolB amino-terminal domain CCNA_03338 PF07676 WD40-like Beta Propeller Repeat CCNA_03340 PF02472 Biopolymer transport protein ExbD/TolR CCNA_03341 PF01618 CCNA_03341 CCNA_03342 PF03061 Thioesterase superfamily CCNA_03344 PF05491 Holliday junction DNA helicase ruvB C-terminus CCNA_03344 PF05496 Holliday junction DNA helicase ruvB N-terminus CCNA_03345 PF01330 RuvA N terminal domain CCNA_03345 PF07499 RuvA, C-terminal domain CCNA_03345 PF14520 Helix-hairpin-helix domain CCNA_03346 PF02075 Crossover junction endodeoxyribonuclease RuvC CCNA_03347 PF01546 Peptidase family M20/M25/M40 CCNA_03347 PF07687 Peptidase dimerisation domain CCNA_03351 PF01259 SAICAR synthetase CCNA_03352 PF01709 Transcriptional regulator CCNA_03353 PF13277 YmdB-like protein CCNA_03354 PF01812 5-formyltetrahydrofolate cyclo-ligase family CCNA_03355 PF00326 Prolyl oligopeptidase family CCNA_03356 PF05164 Cell division protein ZapA CCNA_03358 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCNA_03358 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCNA_03359 PF00162 Phosphoglycerate kinase CCNA_03360 PF01116 Fructose-bisphosphate aldolase class-II CCNA_03362 PF04542 Sigma-70 region 2 CCNA_03362 PF04545 Sigma-70, region 4 CCNA_03363 PF10048 CCNA_03363 CCNA_03364 PF05114 Protein of unknown function (DUF692) CCNA_03365 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) CCNA_03366 PF07681 CCNA_03366 CCNA_03367 PF00072 Response regulator receiver domain CCNA_03369 PF03073 TspO/MBR family CCNA_03370 PF00583 Acetyltransferase (GNAT) family CCNA_03371 PF00210 Ferritin-like domain CCNA_03372 PF04324 BFD-like [2Fe-2S] binding domain CCNA_03373 PF02581 Thiamine monophosphate synthase/TENI CCNA_03375 PF04542 Sigma-70 region 2 CCNA_03375 PF08281 Sigma-70, region 4 CCNA_03375 PF12680 SnoaL-like domain CCNA_03378 PF00459 Inositol monophosphatase family CCNA_03379 PF13443 Cro/C1-type HTH DNA-binding domain CCNA_03381 PF03009 Glycerophosphoryl diester phosphodiesterase family CCNA_03383 PF00005 ABC transporter CCNA_03383 PF00664 ABC transporter transmembrane region CCNA_03384 PF01197 Ribosomal protein L31 CCNA_03385 PF03692 CCNA_03385 CCNA_03386 PF00905 Penicillin binding protein transpeptidase domain CCNA_03386 PF00912 Transglycosylase CCNA_03386 PF17093 CCNA_03386 CCNA_03387 PF01177 Asp/Glu/Hydantoin racemase CCNA_03388 PF12730 CCNA_03388 CCNA_03389 PF00005 ABC transporter CCNA_03391 PF13443 Cro/C1-type HTH DNA-binding domain CCNA_03392 PF02222 ATP-grasp domain CCNA_03393 PF00731 AIR carboxylase CCNA_03394 PF00990 GGDEF domain CCNA_03395 PF00072 Response regulator receiver domain CCNA_03396 PF05299 M61 glycyl aminopeptidase CCNA_03397 PF04325 Protein of unknown function (DUF465) CCNA_03398 PF09523 CCNA_03398 CCNA_03399 PF02441 Flavoprotein CCNA_03400 PF04325 Protein of unknown function (DUF465) CCNA_03401 PF06242 CCNA_03401 CCNA_03402 PF00107 Zinc-binding dehydrogenase CCNA_03402 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_03403 PF06698 CCNA_03403 CCNA_03404 PF07323 Protein of unknown function (DUF1465) CCNA_03405 PF08511 COQ9 CCNA_03406 PF01165 Ribosomal protein S21 CCNA_03407 PF12698 ABC-2 family transporter protein CCNA_03408 PF00005 ABC transporter CCNA_03409 PF00561 alpha/beta hydrolase fold CCNA_03410 PF01551 Peptidase family M23 CCNA_03412 PF02233 NAD(P) transhydrogenase beta subunit CCNA_03413 PF12769 Domain of unknown function (DUF3814) CCNA_03414 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCNA_03414 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCNA_03415 PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV CCNA_03416 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCNA_03417 PF12697 Alpha/beta hydrolase family CCNA_03418 PF03061 Thioesterase superfamily CCNA_03419 PF04542 Sigma-70 region 2 CCNA_03419 PF08281 Sigma-70, region 4 CCNA_03421 PF03109 CCNA_03421 CCNA_03422 PF01432 Peptidase family M3 CCNA_03422 PF08439 Oligopeptidase F CCNA_03423 PF04237 YjbR CCNA_03424 PF00072 Response regulator receiver domain CCNA_03424 PF00158 Sigma-54 interaction domain CCNA_03424 PF02954 Bacterial regulatory protein, Fis family CCNA_03428 PF10073 CCNA_03428 CCNA_03429 PF13419 Haloacid dehalogenase-like hydrolase CCNA_03430 PF00444 Ribosomal protein L36 CCNA_03431 PF01471 Putative peptidoglycan binding domain CCNA_03431 PF13406 Transglycosylase SLT domain CCNA_03432 PF01263 Aldose 1-epimerase CCNA_03433 PF06224 CCNA_03433 CCNA_03434 PF00072 Response regulator receiver domain CCNA_03434 PF00486 Transcriptional regulatory protein, C terminal CCNA_03435 PF01476 LysM domain CCNA_03435 PF04773 FecR protein CCNA_03436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03436 PF05226 CCNA_03436 CCNA_03436 PF08448 PAS fold CCNA_03440 PF02696 CCNA_03440 CCNA_03441 PF13586 CCNA_03441 CCNA_03442 PF13340 CCNA_03442 CCNA_03443 PF02696 CCNA_03443 CCNA_03444 PF00593 TonB dependent receptor CCNA_03444 PF07715 TonB-dependent Receptor Plug Domain CCNA_03445 PF04389 Peptidase family M28 CCNA_03446 PF00501 AMP-binding enzyme CCNA_03449 PF10119 CCNA_03449 CCNA_03449 PF13649 Methyltransferase domain CCNA_03453 PF00440 Bacterial regulatory proteins, tetR family CCNA_03454 PF12850 Calcineurin-like phosphoesterase superfamily domain CCNA_03455 PF13439 Glycosyltransferase Family 4 CCNA_03455 PF13692 Glycosyl transferases group 1 CCNA_03456 PF01738 Dienelactone hydrolase family CCNA_03456 PF07859 alpha/beta hydrolase fold CCNA_03457 PF05090 CCNA_03457 CCNA_03459 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_03459 PF08447 PAS fold CCNA_03459 PF08448 PAS fold CCNA_03462 PF00266 Aminotransferase class-V CCNA_03463 PF02347 Glycine cleavage system P-protein CCNA_03464 PF01597 Glycine cleavage H-protein CCNA_03465 PF01571 Aminomethyltransferase folate-binding domain CCNA_03465 PF08669 Glycine cleavage T-protein C-terminal barrel domain CCNA_03466 PF10543 CCNA_03466 CCNA_03467 PF16313 CCNA_03467 CCNA_03467 PF17148 CCNA_03467 CCNA_03468 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCNA_03468 PF00672 HAMP domain CCNA_03469 PF00750 tRNA synthetases class I (R) CCNA_03469 PF03485 Arginyl tRNA synthetase N terminal domain CCNA_03469 PF05746 DALR anticodon binding domain CCNA_03471 PF02401 LytB protein CCNA_03473 PF02661 Fic/DOC family CCNA_03475 PF01636 Phosphotransferase enzyme family CCNA_03476 PF00075 RNase H CCNA_03477 PF00581 Rhodanese-like domain CCNA_03478 PF01965 DJ-1/PfpI family CCNA_03478 PF12833 Helix-turn-helix domain CCNA_03479 PF01638 HxlR-like helix-turn-helix CCNA_03480 PF13460 NADH(P)-binding CCNA_03481 PF00239 Resolvase, N terminal domain CCNA_03482 PF01061 CCNA_03482 CCNA_03483 PF00005 ABC transporter CCNA_03484 PF01957 NfeD-like C-terminal, partner-binding CCNA_03485 PF01145 SPFH domain / Band 7 family CCNA_03485 PF16200 CCNA_03485 CCNA_03486 PF09539 CCNA_03486 CCNA_03489 PF03060 Nitronate monooxygenase CCNA_03491 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_03493 PF00293 NUDIX domain CCNA_03494 PF01734 Patatin-like phospholipase CCNA_03495 PF00106 short chain dehydrogenase CCNA_03496 PF03883 CCNA_03496 CCNA_03498 PF13601 Winged helix DNA-binding domain CCNA_03500 PF01565 FAD binding domain CCNA_03500 PF02913 FAD linked oxidases, C-terminal domain CCNA_03501 PF01300 Telomere recombination CCNA_03501 PF03481 Putative GTP-binding controlling metal-binding CCNA_03502 PF01292 Prokaryotic cytochrome b561 CCNA_03502 PF04264 YceI-like domain CCNA_03503 PF04264 YceI-like domain CCNA_03504 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_03504 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_03504 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_03504 PF12806 CCNA_03504 CCNA_03505 PF08534 Redoxin CCNA_03506 PF02622 Uncharacterized ACR, COG1678 CCNA_03507 PF00563 EAL domain CCNA_03507 PF00990 GGDEF domain CCNA_03508 PF13302 Acetyltransferase (GNAT) domain CCNA_03509 PF00675 Insulinase (Peptidase family M16) CCNA_03509 PF05193 Peptidase M16 inactive domain CCNA_03510 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_03510 PF14821 Threonine synthase N terminus CCNA_03511 PF02104 CCNA_03511 CCNA_03512 PF06170 CCNA_03512 CCNA_03513 PF00510 Cytochrome c oxidase subunit III CCNA_03514 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CCNA_03516 PF01040 UbiA prenyltransferase family CCNA_03517 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCNA_03518 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCNA_03518 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CCNA_03519 PF03551 Transcriptional regulator PadR-like family CCNA_03520 PF08006 CCNA_03520 CCNA_03521 PF10988 Protein of unknown function (DUF2807) CCNA_03522 PF01523 Putative modulator of DNA gyrase CCNA_03523 PF00583 Acetyltransferase (GNAT) family CCNA_03524 PF00854 POT family CCNA_03527 PF04107 Glutamate-cysteine ligase family 2(GCS2) CCNA_03528 PF04452 RNA methyltransferase CCNA_03529 PF03976 Polyphosphate kinase 2 (PPK2) CCNA_03530 PF08818 Domain of unknown function (DU1801) CCNA_03531 PF00450 Serine carboxypeptidase CCNA_03532 PF13687 CCNA_03532 CCNA_03533 PF00005 ABC transporter CCNA_03533 PF00664 ABC transporter transmembrane region CCNA_03534 PF01040 UbiA prenyltransferase family CCNA_03535 PF00487 CCNA_03535 CCNA_03536 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CCNA_03537 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCNA_03538 PF01370 NAD dependent epimerase/dehydratase family CCNA_03540 PF04750 CCNA_03540 CCNA_03541 PF00248 Aldo/keto reductase family CCNA_03543 PF00171 Aldehyde dehydrogenase family CCNA_03544 PF01467 Cytidylyltransferase CCNA_03545 PF02410 Oligomerisation domain CCNA_03546 PF02590 Predicted SPOUT methyltransferase CCNA_03547 PF01551 Peptidase family M23 CCNA_03548 PF00595 PDZ domain (Also known as DHR or GLGF) CCNA_03548 PF03572 Peptidase family S41 CCNA_03549 PF00593 TonB dependent receptor CCNA_03549 PF07715 TonB-dependent Receptor Plug Domain CCNA_03552 PF04748 Divergent polysaccharide deacetylase CCNA_03553 PF00293 NUDIX domain CCNA_03554 PF12146 Putative lysophospholipase CCNA_03555 PF12697 Alpha/beta hydrolase family CCNA_03556 PF00893 Small Multidrug Resistance protein CCNA_03558 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCNA_03560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCNA_03560 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCNA_03561 PF00231 ATP synthase CCNA_03562 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCNA_03562 PF00306 ATP synthase alpha/beta chain, C terminal domain CCNA_03562 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCNA_03563 PF00213 ATP synthase delta (OSCP) subunit CCNA_03567 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCNA_03567 PF02770 Acyl-CoA dehydrogenase, middle domain CCNA_03567 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCNA_03568 PF04011 LemA family CCNA_03569 PF04536 TLP18 CCNA_03570 PF04536 TLP18 CCNA_03571 PF02517 CAAX protease self-immunity CCNA_03572 PF07045 Protein of unknown function (DUF1330) CCNA_03573 PF07969 Amidohydrolase family CCNA_03574 PF00593 TonB dependent receptor CCNA_03574 PF07715 TonB-dependent Receptor Plug Domain CCNA_03575 PF00108 Thiolase, N-terminal domain CCNA_03575 PF02803 Thiolase, C-terminal domain CCNA_03577 PF00476 DNA polymerase family A CCNA_03577 PF01367 5'-3' exonuclease, C-terminal SAM fold CCNA_03577 PF01612 3'-5' exonuclease CCNA_03577 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCNA_03578 PF00270 DEAD/DEAH box helicase CCNA_03578 PF00271 Helicase conserved C-terminal domain CCNA_03578 PF00570 HRDC domain CCNA_03578 PF09382 RQC domain CCNA_03578 PF16124 CCNA_03578 CCNA_03580 PF06319 Protein of unknown function (DUF1052) CCNA_03581 PF00892 EamA-like transporter family CCNA_03582 PF00459 Inositol monophosphatase family CCNA_03583 PF12073 CCNA_03583 CCNA_03584 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) CCNA_03585 PF00072 Response regulator receiver domain CCNA_03586 PF01739 CheR methyltransferase, SAM binding domain CCNA_03586 PF03705 CheR methyltransferase, all-alpha domain CCNA_03587 PF08085 CCNA_03587 CCNA_03588 PF07568 CCNA_03588 CCNA_03589 PF04542 Sigma-70 region 2 CCNA_03589 PF08281 Sigma-70, region 4 CCNA_03591 PF00072 Response regulator receiver domain CCNA_03592 PF08212 Lipocalin-like domain CCNA_03593 PF11266 Protein of unknown function (DUF3066) CCNA_03594 PF02146 Sir2 family CCNA_03595 PF08241 Methyltransferase domain CCNA_03596 PF04434 CCNA_03596 CCNA_03597 PF06262 Possibl zinc metallo-peptidase CCNA_03598 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03598 PF12860 CCNA_03598 CCNA_03599 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCNA_03599 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCNA_03600 PF01925 CCNA_03600 CCNA_03601 PF03006 CCNA_03601 CCNA_03602 PF01734 Patatin-like phospholipase CCNA_03603 PF00144 Beta-lactamase CCNA_03603 PF11954 CCNA_03603 CCNA_03605 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) CCNA_03607 PF00317 Ribonucleotide reductase, all-alpha domain CCNA_03607 PF02867 Ribonucleotide reductase, barrel domain CCNA_03609 PF00691 OmpA family CCNA_03609 PF13505 Outer membrane protein beta-barrel domain CCNA_03610 PF13847 Methyltransferase domain CCNA_03611 PF00999 Sodium/hydrogen exchanger family CCNA_03611 PF02254 TrkA-N domain CCNA_03612 PF13560 Helix-turn-helix domain CCNA_03613 PF01575 MaoC like domain CCNA_03615 PF00593 TonB dependent receptor CCNA_03615 PF07715 TonB-dependent Receptor Plug Domain CCNA_03616 PF03929 CCNA_03616 CCNA_03617 PF04314 Protein of unknown function (DUF461) CCNA_03618 PF02630 SCO1/SenC CCNA_03619 PF01431 Peptidase family M13 CCNA_03619 PF05649 Peptidase family M13 CCNA_03621 PF12833 Helix-turn-helix domain CCNA_03622 PF03965 Penicillinase repressor CCNA_03623 PF03544 Gram-negative bacterial TonB protein C-terminal CCNA_03623 PF05569 BlaR1 peptidase M56 CCNA_03624 PF05982 CCNA_03624 CCNA_03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_03625 PF03466 LysR substrate binding domain CCNA_03626 PF01634 ATP phosphoribosyltransferase CCNA_03627 PF13393 Histidyl-tRNA synthetase CCNA_03628 PF03129 Anticodon binding domain CCNA_03628 PF13393 Histidyl-tRNA synthetase CCNA_03630 PF13274 CCNA_03630 CCNA_03633 PF01541 GIY-YIG catalytic domain CCNA_03634 PF13564 CCNA_03634 CCNA_03636 PF04055 Radical SAM superfamily CCNA_03636 PF06968 Biotin and Thiamin Synthesis associated domain CCNA_03637 PF01928 CYTH domain CCNA_03637 PF05235 CHAD domain CCNA_03639 PF00111 2Fe-2S iron-sulfur cluster binding domain CCNA_03640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_03640 PF14759 Reductase C-terminal CCNA_03641 PF13085 2Fe-2S iron-sulfur cluster binding domain CCNA_03641 PF13534 4Fe-4S dicluster domain CCNA_03642 PF00890 FAD binding domain CCNA_03642 PF02910 Fumarate reductase flavoprotein C-term CCNA_03643 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CCNA_03644 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CCNA_03646 PF03969 AFG1-like ATPase CCNA_03647 PF01553 Acyltransferase CCNA_03648 PF02367 Uncharacterised P-loop hydrolase UPF0079 CCNA_03649 PF01636 Phosphotransferase enzyme family CCNA_03650 PF12804 MobA-like NTP transferase domain CCNA_03651 PF12705 PD-(D/E)XK nuclease superfamily CCNA_03652 PF00580 UvrD/REP helicase N-terminal domain CCNA_03652 PF12705 PD-(D/E)XK nuclease superfamily CCNA_03652 PF13361 UvrD-like helicase C-terminal domain CCNA_03653 PF00085 Thioredoxin CCNA_03655 PF08245 Mur ligase middle domain CCNA_03656 PF01039 Carboxyl transferase domain CCNA_03657 PF00290 Tryptophan synthase alpha chain CCNA_03658 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_03659 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CCNA_03660 PF06233 CCNA_03660 CCNA_03663 PF00390 Malic enzyme, N-terminal domain CCNA_03663 PF01515 Phosphate acetyl/butaryl transferase CCNA_03663 PF03949 Malic enzyme, NAD binding domain CCNA_03664 PF01113 Dihydrodipicolinate reductase, N-terminus CCNA_03664 PF05173 Dihydrodipicolinate reductase, C-terminus CCNA_03665 PF11739 CCNA_03665 CCNA_03666 PF13617 CCNA_03666 CCNA_03667 PF07027 CCNA_03667 CCNA_03669 PF13441 CCNA_03669 CCNA_03670 PF00781 Diacylglycerol kinase catalytic domain CCNA_03671 PF00149 Calcineurin-like phosphoesterase CCNA_03672 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCNA_03672 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCNA_03675 PF07536 CCNA_03675 CCNA_03675 PF08447 PAS fold CCNA_03676 PF00583 Acetyltransferase (GNAT) family CCNA_03677 PF02515 CoA-transferase family III CCNA_03678 PF13628 CCNA_03678 CCNA_03679 PF03061 Thioesterase superfamily CCNA_03680 PF01433 Peptidase family M1 CCNA_03681 PF00005 ABC transporter CCNA_03682 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCNA_03683 PF13417 Glutathione S-transferase, N-terminal domain CCNA_03684 PF00484 Carbonic anhydrase CCNA_03685 PF00905 Penicillin binding protein transpeptidase domain CCNA_03685 PF00912 Transglycosylase CCNA_03685 PF06832 CCNA_03685 CCNA_03686 PF00207 Alpha-2-macroglobulin family CCNA_03686 PF01835 MG2 domain CCNA_03686 PF07703 Alpha-2-macroglobulin family N-terminal region CCNA_03686 PF11974 Alpha-2-macroglobulin MG1 domain CCNA_03687 PF00484 Carbonic anhydrase CCNA_03688 PF01037 AsnC family CCNA_03688 PF13404 AsnC-type helix-turn-helix domain CCNA_03689 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCNA_03689 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCNA_03690 PF02348 Cytidylyltransferase CCNA_03691 PF00248 Aldo/keto reductase family CCNA_03692 PF02625 XdhC and CoxI family CCNA_03692 PF13478 XdhC Rossmann domain CCNA_03693 PF02633 Creatinine amidohydrolase CCNA_03694 PF02954 Bacterial regulatory protein, Fis family CCNA_03695 PF00171 Aldehyde dehydrogenase family CCNA_03696 PF00501 AMP-binding enzyme CCNA_03696 PF13193 AMP-binding enzyme C-terminal domain CCNA_03696 PF16177 CCNA_03696 CCNA_03697 PF03364 Polyketide cyclase / dehydrase and lipid transport CCNA_03698 PF04134 CCNA_03698 CCNA_03699 PF00675 Insulinase (Peptidase family M16) CCNA_03699 PF05193 Peptidase M16 inactive domain CCNA_03700 PF01741 Large-conductance mechanosensitive channel, MscL CCNA_03701 PF00216 Bacterial DNA-binding protein CCNA_03702 PF00575 S1 RNA binding domain CCNA_03703 PF02224 Cytidylate kinase CCNA_03704 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCNA_03705 PF09538 CCNA_03705 CCNA_03706 PF00011 Hsp20/alpha crystallin family CCNA_03707 PF06620 CCNA_03707 CCNA_03708 PF13586 CCNA_03708 CCNA_03709 PF13340 CCNA_03709 CCNA_03710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCNA_03711 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CCNA_03711 PF16321 CCNA_03711 CCNA_03712 PF06055 CCNA_03712 CCNA_03713 PF00309 CCNA_03713 CCNA_03713 PF04552 Sigma-54, DNA binding domain CCNA_03713 PF04963 Sigma-54 factor, core binding domain CCNA_03714 PF00005 ABC transporter CCNA_03714 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCNA_03715 PF03968 OstA-like protein CCNA_03716 PF06835 Lipopolysaccharide-assembly, LptC-related CCNA_03717 PF01612 3'-5' exonuclease CCNA_03718 PF13460 NADH(P)-binding CCNA_03719 PF02673 CCNA_03719 CCNA_03721 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCNA_03721 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCNA_03722 PF00310 Glutamine amidotransferases class-II CCNA_03722 PF01493 GXGXG motif CCNA_03722 PF01645 Conserved region in glutamate synthase CCNA_03722 PF04898 Glutamate synthase central domain CCNA_03723 PF03061 Thioesterase superfamily CCNA_03725 PF01068 ATP dependent DNA ligase domain CCNA_03725 PF04675 DNA ligase N terminus CCNA_03725 PF04679 ATP dependent DNA ligase C terminal region CCNA_03726 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCNA_03727 PF00924 Mechanosensitive ion channel CCNA_03729 PF00923 Transaldolase CCNA_03730 PF04321 RmlD substrate binding domain CCNA_03731 PF13242 HAD-hyrolase-like CCNA_03732 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) CCNA_03733 PF00483 Nucleotidyl transferase CCNA_03733 PF01050 Mannose-6-phosphate isomerase CCNA_03734 PF00795 Carbon-nitrogen hydrolase CCNA_03734 PF02540 NAD synthase CCNA_03735 PF00456 Transketolase, thiamine diphosphate binding domain CCNA_03735 PF02779 Transketolase, pyrimidine binding domain CCNA_03735 PF02780 Transketolase, C-terminal domain CCNA_03736 PF02325 CCNA_03736 CCNA_03737 PF02594 Uncharacterised ACR, YggU family COG1872 CCNA_03738 PF00072 Response regulator receiver domain CCNA_03738 PF00512 His Kinase A (phospho-acceptor) domain CCNA_03738 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCNA_03739 PF03852 DNA mismatch endonuclease Vsr CCNA_03740 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_03741 PF00145 C-5 cytosine-specific DNA methylase CCNA_03743 PF00144 Beta-lactamase CCNA_03744 PF16363 CCNA_03744 CCNA_03745 PF00551 Formyl transferase CCNA_03745 PF01842 ACT domain CCNA_03746 PF01546 Peptidase family M20/M25/M40 CCNA_03746 PF07687 Peptidase dimerisation domain CCNA_03747 PF00535 Glycosyl transferase family 2 CCNA_03748 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CCNA_03749 PF00561 alpha/beta hydrolase fold CCNA_03750 PF00291 Pyridoxal-phosphate dependent enzyme CCNA_03750 PF13291 ACT domain CCNA_03751 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCNA_03751 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCNA_03752 PF00483 Nucleotidyl transferase CCNA_03753 PF08331 CCNA_03753 CCNA_03753 PF13484 CCNA_03753 CCNA_03754 PF00043 Glutathione S-transferase, C-terminal domain CCNA_03754 PF13417 Glutathione S-transferase, N-terminal domain CCNA_03755 PF00294 pfkB family carbohydrate kinase CCNA_03755 PF01467 Cytidylyltransferase CCNA_03756 PF01545 Cation efflux family CCNA_03756 PF16916 CCNA_03756 CCNA_03757 PF00285 Citrate synthase CCNA_03758 PF00285 Citrate synthase CCNA_03759 PF00753 Metallo-beta-lactamase superfamily CCNA_03760 PF03061 Thioesterase superfamily CCNA_03761 PF03061 Thioesterase superfamily CCNA_03763 PF00850 Histone deacetylase domain CCNA_03764 PF13622 Thioesterase-like superfamily CCNA_03765 PF00293 NUDIX domain CCNA_03766 PF01782 RimM N-terminal domain CCNA_03766 PF05239 PRC-barrel domain CCNA_03767 PF00886 Ribosomal protein S16 CCNA_03768 PF00448 SRP54-type protein, GTPase domain CCNA_03768 PF02881 SRP54-type protein, helical bundle domain CCNA_03768 PF02978 Signal peptide binding domain CCNA_03769 PF09351 Domain of unknown function (DUF1993) CCNA_03770 PF00056 lactate/malate dehydrogenase, NAD binding domain CCNA_03770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CCNA_03771 PF01575 MaoC like domain CCNA_03772 PF01230 HIT domain CCNA_03774 PF03328 HpcH/HpaI aldolase/citrate lyase family CCNA_03775 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) CCNA_03776 PF13563 2'-5' RNA ligase superfamily CCNA_03777 PF00248 Aldo/keto reductase family CCNA_03778 PF01027 Inhibitor of apoptosis-promoting Bax1 CCNA_03779 PF10984 CCNA_03779 CCNA_03780 PF06764 Protein of unknown function (DUF1223) CCNA_03781 PF00330 Aconitase family (aconitate hydratase) CCNA_03781 PF00694 Aconitase C-terminal domain CCNA_03782 PF00005 ABC transporter CCNA_03783 PF03379 CCNA_03783 CCNA_03784 PF00892 EamA-like transporter family CCNA_03786 PF01578 CCNA_03786 CCNA_03787 PF04995 CCNA_03787 CCNA_03788 PF08534 Redoxin CCNA_03791 PF12802 MarR family CCNA_03792 PF04279 CCNA_03792 CCNA_03793 PF00448 SRP54-type protein, GTPase domain CCNA_03793 PF02881 SRP54-type protein, helical bundle domain CCNA_03794 PF03458 CCNA_03794 CCNA_03795 PF05099 Tellurite resistance protein TerB CCNA_03796 PF03741 CCNA_03796 CCNA_03797 PF04828 Glutathione-dependent formaldehyde-activating enzyme CCNA_03798 PF00919 Uncharacterized protein family UPF0004 CCNA_03798 PF04055 Radical SAM superfamily CCNA_03799 PF00106 short chain dehydrogenase CCNA_03800 PF01678 Diaminopimelate epimerase CCNA_03801 PF00326 Prolyl oligopeptidase family CCNA_03801 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCNA_03802 PF00326 Prolyl oligopeptidase family CCNA_03802 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CCNA_03803 PF13480 Acetyltransferase (GNAT) domain CCNA_03804 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) CCNA_03805 PF03551 Transcriptional regulator PadR-like family CCNA_03806 PF04333 CCNA_03806 CCNA_03807 PF05494 Toluene tolerance, Ttg2 CCNA_03808 PF02470 CCNA_03808 CCNA_03809 PF02405 CCNA_03809 CCNA_03810 PF00005 ABC transporter CCNA_03811 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCNA_03811 PF03466 LysR substrate binding domain CCNA_03812 PF02627 Carboxymuconolactone decarboxylase family CCNA_03814 PF10604 Polyketide cyclase / dehydrase and lipid transport CCNA_03815 PF01963 CCNA_03815 CCNA_03816 PF01432 Peptidase family M3 CCNA_03817 PF01177 Asp/Glu/Hydantoin racemase CCNA_03819 PF01580 FtsK/SpoIIIE family CCNA_03819 PF09397 Ftsk gamma domain CCNA_03819 PF13491 CCNA_03819 CCNA_03820 PF03548 Outer membrane lipoprotein carrier protein LolA CCNA_03821 PF03372 Endonuclease/Exonuclease/phosphatase family CCNA_03822 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCNA_03822 PF06827 Zinc finger found in FPG and IleRS CCNA_03822 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCNA_03823 PF01209 ubiE/COQ5 methyltransferase family CCNA_03824 PF03109 CCNA_03824 CCNA_03825 PF16826 CCNA_03825 CCNA_03827 PF02441 Flavoprotein CCNA_03827 PF04127 DNA / pantothenate metabolism flavoprotein CCNA_03828 PF00692 dUTPase CCNA_03830 PF16576 CCNA_03830 CCNA_03831 PF07690 Major Facilitator Superfamily CCNA_03832 PF00440 Bacterial regulatory proteins, tetR family CCNA_03832 PF14246 AefR-like transcriptional repressor, C-terminal region CCNA_03833 PF13561 Enoyl-(Acyl carrier protein) reductase CCNA_03834 PF13844 Glycosyl transferase family 41 CCNA_03835 PF00109 Beta-ketoacyl synthase, N-terminal domain CCNA_03835 PF02801 Beta-ketoacyl synthase, C-terminal domain CCNA_03836 PF07977 FabA-like domain CCNA_03837 PF06347 Bacterial SH3 domain CCNA_03838 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCNA_03838 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCNA_03839 PF00326 Prolyl oligopeptidase family CCNA_03840 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CCNA_03840 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CCNA_03841 PF00561 alpha/beta hydrolase fold CCNA_03842 PF00899 ThiF family CCNA_03843 PF00227 Proteasome subunit CCNA_03844 PF00004 ATPase family associated with various cellular activities (AAA) CCNA_03844 PF07724 AAA domain (Cdc48 subfamily) CCNA_03844 PF10431 C-terminal, D2-small domain, of ClpB protein CCNA_03845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCNA_03845 PF12833 Helix-turn-helix domain CCNA_03846 PF10003 CCNA_03846 CCNA_03847 PF00633 Helix-hairpin-helix motif CCNA_03847 PF00730 HhH-GPD superfamily base excision DNA repair protein CCNA_03847 PF10576 Iron-sulfur binding domain of endonuclease III CCNA_03849 PF00294 pfkB family carbohydrate kinase CCNA_03850 PF00475 Imidazoleglycerol-phosphate dehydratase CCNA_03851 PF00117 Glutamine amidotransferase class-I CCNA_03852 PF00977 Histidine biosynthesis protein CCNA_03853 PF00977 Histidine biosynthesis protein CCNA_03854 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CCNA_03855 PF01713 Smr domain CCNA_03856 PF03562 MltA specific insert domain CCNA_03856 PF06725 3D domain CCNA_03857 PF04280 Tim44-like domain CCNA_03858 PF02556 Preprotein translocase subunit SecB CCNA_03859 PF00072 Response regulator receiver domain CCNA_03859 PF00486 Transcriptional regulatory protein, C terminal CCNA_03860 PF03734 L,D-transpeptidase catalytic domain CCNA_03861 PF01168 Alanine racemase, N-terminal domain CCNA_03862 PF02581 Thiamine monophosphate synthase/TENI CCNA_03864 PF12100 CCNA_03864 CCNA_03865 PF00133 tRNA synthetases class I (I, L, M and V) CCNA_03865 PF08264 Anticodon-binding domain of tRNA CCNA_03865 PF09334 tRNA synthetases class I (M) CCNA_03865 PF13603 Leucyl-tRNA synthetase, Domain 2 CCNA_03866 PF04390 Lipopolysaccharide-assembly CCNA_03868 PF02195 ParB-like nuclease domain CCNA_03869 PF13614 AAA domain CCNA_03870 PF02527 rRNA small subunit methyltransferase G CCNA_03871 PF01134 Glucose inhibited division protein A CCNA_03871 PF13932 GidA associated domain 3 CCNA_03872 PF01926 50S ribosome-binding GTPase CCNA_03872 PF10396 GTP-binding protein TrmE N-terminus CCNA_03872 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CCNA_03874 PF01738 Dienelactone hydrolase family CCNA_03875 PF00107 Zinc-binding dehydrogenase CCNA_03875 PF08240 Alcohol dehydrogenase GroES-like domain CCNA_03876 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCNA_03876 PF07497 Rho termination factor, RNA-binding domain CCNA_03876 PF07498 Rho termination factor, N-terminal domain CCNA_03877 PF03653 CCNA_03877 CCNA_03878 PF00762 Ferrochelatase CCNA_03879 PF01208 Uroporphyrinogen decarboxylase (URO-D) CCNA_03880 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CCNA_03882 PF05135 Phage gp6-like head-tail connector protein CCNA_03885 PF02517 CAAX protease self-immunity CCNA_03886 PF13365 Trypsin-like peptidase domain CCNA_03887 PF13559 CCNA_03887 CCNA_03892 PF01966 HD domain CCNA_03894 PF13347 MFS/sugar transport protein CCNA_03897 PF11625 Protein of unknown function (DUF3253) CCNA_03898 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain CCNA_03903 PF13340 CCNA_03903 CCNA_03905 PF06532 CCNA_03905 CCNA_03921 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCNA_03949 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CCNA_03953 PF08570 CCNA_03953 CCNA_03957 PF01206 Sulfurtransferase TusA CCNA_03977 PF12728 Helix-turn-helix domain CCNA_03989 PF00583 Acetyltransferase (GNAT) family CCNA_03989 PF12802 MarR family CCNA_03997 PF07813 LTXXQ motif family protein CCNA_03998 PF13579 Glycosyl transferase 4-like domain CCNA_03998 PF13692 Glycosyl transferases group 1 CCNA_R0096 PF00488 MutS domain V