CCNA_00005 SM00479 CCNA_00005 CCNA_00008 SM00382 ATPases associated with a variety of cellular activities CCNA_00008 SM00760 Bacterial dnaA protein helix-turn-helix domain CCNA_00011 SM00271 DnaJ molecular chaperone homology domain CCNA_00012 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CCNA_00012 SM00534 ATPase domain of DNA mismatch repair MUTS family CCNA_00013 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CCNA_00015 SM00852 Probable molybdopterin binding domain CCNA_00018 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_00021 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCNA_00026 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00026 SM00091 PAS domain CCNA_00026 SM00387 Histidine kinase-like ATPases CCNA_00026 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00026 SM00448 cheY-homologous receiver domain CCNA_00027 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CCNA_00033 SM00316 Ribosomal protein S1-like RNA-binding domain CCNA_00033 SM00322 K homology RNA-binding domain CCNA_00034 SM01387 CCNA_00034 CCNA_00043 SM00316 Ribosomal protein S1-like RNA-binding domain CCNA_00043 SM00322 K homology RNA-binding domain CCNA_00049 SM00530 Helix-turn-helix XRE-family like proteins CCNA_00051 SM00116 Domain in cystathionine beta-synthase and other proteins. CCNA_00051 SM01091 Transporter associated domain CCNA_00054 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_00060 SM00932 Scaffold protein Nfu/NifU N terminal CCNA_00064 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00064 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00079 SM00422 helix_turn_helix, mercury resistance CCNA_00084 SM00798 AICARFT/IMPCHase bienzyme CCNA_00084 SM00851 MGS-like domain CCNA_00089 SM00052 Putative diguanylate phosphodiesterase CCNA_00089 SM00091 PAS domain CCNA_00089 SM00267 diguanylate cyclase CCNA_00095 SM00829 Enoylreductase CCNA_00104 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CCNA_00108 SM00464 Found in ATP-dependent protease La (LON) CCNA_00118 SM00028 Tetratricopeptide repeats CCNA_00137 SM00387 Histidine kinase-like ATPases CCNA_00137 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00137 SM00448 cheY-homologous receiver domain CCNA_00139 SM00382 ATPases associated with a variety of cellular activities CCNA_00144 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_00149 SM00530 Helix-turn-helix XRE-family like proteins CCNA_00150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_00155 SM00480 DNA polymerase III beta subunit CCNA_00156 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_00158 SM00382 ATPases associated with a variety of cellular activities CCNA_00159 SM00387 Histidine kinase-like ATPases CCNA_00159 SM00433 TopoisomeraseII CCNA_00173 SM00382 ATPases associated with a variety of cellular activities CCNA_00188 SM00382 ATPases associated with a variety of cellular activities CCNA_00193 SM01329 CCNA_00193 CCNA_00206 SM00882 Coenzyme A transferase CCNA_00207 SM00882 Coenzyme A transferase CCNA_00230 SM00363 S4 RNA-binding domain CCNA_00237 SM00448 cheY-homologous receiver domain CCNA_00237 SM00862 Transcriptional regulatory protein, C terminal CCNA_00238 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00238 SM00387 Histidine kinase-like ATPases CCNA_00238 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00247 SM00448 cheY-homologous receiver domain CCNA_00248 SM00387 Histidine kinase-like ATPases CCNA_00248 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00253 SM00859 Semialdehyde dehydrogenase, NAD binding domain CCNA_00257 SM00996 S-adenosyl-L-homocysteine hydrolase CCNA_00257 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CCNA_00268 SM00382 ATPases associated with a variety of cellular activities CCNA_00270 SM00493 CCNA_00270 CCNA_00286 SM00448 cheY-homologous receiver domain CCNA_00287 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00287 SM00091 PAS domain CCNA_00287 SM00387 Histidine kinase-like ATPases CCNA_00290 SM00869 Autotransporter beta-domain CCNA_00291 SM00387 Histidine kinase-like ATPases CCNA_00291 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00294 SM00382 ATPases associated with a variety of cellular activities CCNA_00296 SM00448 cheY-homologous receiver domain CCNA_00296 SM00862 Transcriptional regulatory protein, C terminal CCNA_00297 SM00850 LytTr DNA-binding domain CCNA_00299 SM01209 CCNA_00299 CCNA_00299 SM01210 CCNA_00299 CCNA_00307 SM00382 ATPases associated with a variety of cellular activities CCNA_00316 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CCNA_00323 SM00833 Cobalamin synthesis protein cobW C-terminal domain CCNA_00326 SM00320 WD40 repeats CCNA_00333 SM00850 LytTr DNA-binding domain CCNA_00341 SM00881 CoA binding domain CCNA_00342 SM00861 Transketolase, pyrimidine binding domain CCNA_00348 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00348 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00351 SM00487 DEAD-like helicases superfamily CCNA_00351 SM00490 helicase superfamily c-terminal domain CCNA_00363 SM00014 Acid phosphatase homologues CCNA_00366 SM00382 ATPases associated with a variety of cellular activities CCNA_00369 SM01091 Transporter associated domain CCNA_00381 SM00478 endonuclease III CCNA_00381 SM00525 CCNA_00381 CCNA_00399 SM00849 Metallo-beta-lactamase superfamily CCNA_00400 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_00415 SM00028 Tetratricopeptide repeats CCNA_00419 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CCNA_00421 SM00905 Dihydroneopterin aldolase CCNA_00432 SM00344 helix_turn_helix ASNC type CCNA_00437 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00439 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00441 SM00448 cheY-homologous receiver domain CCNA_00442 SM00073 Histidine Phosphotransfer domain CCNA_00442 SM00260 Two component signalling adaptor domain CCNA_00442 SM00387 Histidine kinase-like ATPases CCNA_00442 SM01231 CCNA_00442 CCNA_00443 SM00260 Two component signalling adaptor domain CCNA_00444 SM00138 Methyltransferase, chemotaxis proteins CCNA_00445 SM00448 cheY-homologous receiver domain CCNA_00446 SM00448 cheY-homologous receiver domain CCNA_00449 SM00448 cheY-homologous receiver domain CCNA_00454 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_00454 SM00866 CCNA_00454 CCNA_00479 SM00530 Helix-turn-helix XRE-family like proteins CCNA_00481 SM00530 Helix-turn-helix XRE-family like proteins CCNA_00483 SM00849 Metallo-beta-lactamase superfamily CCNA_00492 SM00840 CCNA_00492 CCNA_00495 SM01234 CCNA_00495 CCNA_00496 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CCNA_00509 SM00855 Phosphoglycerate mutase family CCNA_00520 SM01400 CCNA_00520 CCNA_00537 SM00663 RNA polymerase I subunit A N-terminus CCNA_00538 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00538 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00545 SM00822 CCNA_00545 CCNA_00550 SM00354 helix_turn _helix lactose operon repressor CCNA_00553 SM00849 Metallo-beta-lactamase superfamily CCNA_00555 SM00938 Nitrogen regulatory protein P-II CCNA_00556 SM00155 Phospholipase D. Active site motifs. CCNA_00560 SM00855 Phosphoglycerate mutase family CCNA_00564 SM00387 Histidine kinase-like ATPases CCNA_00564 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00566 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CCNA_00570 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_00570 SM00866 CCNA_00570 CCNA_00579 SM00477 DNA/RNA non-specific endonuclease CCNA_00579 SM00892 DNA/RNA non-specific endonuclease CCNA_00586 SM00850 LytTr DNA-binding domain CCNA_00597 SM00965 Secretin and TonB N terminus short domain CCNA_00601 SM00382 ATPases associated with a variety of cellular activities CCNA_00608 SM00710 Parallel beta-helix repeats CCNA_00609 SM00354 helix_turn _helix lactose operon repressor CCNA_00616 SM00344 helix_turn_helix ASNC type CCNA_00623 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00623 SM00091 PAS domain CCNA_00623 SM00387 Histidine kinase-like ATPases CCNA_00623 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00625 SM00448 cheY-homologous receiver domain CCNA_00626 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00626 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00628 SM00448 cheY-homologous receiver domain CCNA_00629 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_00629 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_00630 SM00073 Histidine Phosphotransfer domain CCNA_00630 SM00260 Two component signalling adaptor domain CCNA_00630 SM00387 Histidine kinase-like ATPases CCNA_00630 SM01231 CCNA_00630 CCNA_00631 SM00260 Two component signalling adaptor domain CCNA_00632 SM00448 cheY-homologous receiver domain CCNA_00633 SM00448 cheY-homologous receiver domain CCNA_00634 SM00138 Methyltransferase, chemotaxis proteins CCNA_00635 SM01080 CCNA_00635 CCNA_00638 SM00912 haemagglutination activity domain CCNA_00647 SM00382 ATPases associated with a variety of cellular activities CCNA_00648 SM01012 CCNA_00648 CCNA_00653 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CCNA_00659 SM00487 DEAD-like helicases superfamily CCNA_00665 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CCNA_00665 SM00911 HWE histidine kinase CCNA_00666 SM00448 cheY-homologous receiver domain CCNA_00670 SM00382 ATPases associated with a variety of cellular activities CCNA_00673 SM00342 helix_turn_helix, arabinose operon control protein CCNA_00678 SM00649 Ribosomal protein L11/L12 CCNA_00689 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00689 SM00091 PAS domain CCNA_00689 SM00387 Histidine kinase-like ATPases CCNA_00689 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00689 SM00448 cheY-homologous receiver domain CCNA_00690 SM01058 CarD-like/TRCF domain CCNA_00692 SM00052 Putative diguanylate phosphodiesterase CCNA_00692 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00692 SM00267 diguanylate cyclase CCNA_00694 SM00490 helicase superfamily c-terminal domain CCNA_00701 SM00357 Cold shock protein domain CCNA_00708 SM00327 von Willebrand factor (vWF) type A domain CCNA_00720 SM00382 ATPases associated with a variety of cellular activities CCNA_00722 SM00883 Chaperonin 10 Kd subunit CCNA_00730 SM00422 helix_turn_helix, mercury resistance CCNA_00731 SM00853 MutL C terminal dimerisation domain CCNA_00731 SM01340 CCNA_00731 CCNA_00738 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_00740 SM00904 Riboflavin kinase CCNA_00744 SM00465 GIY-YIG type nucleases (URI domain) CCNA_00747 SM00052 Putative diguanylate phosphodiesterase CCNA_00748 SM00899 CCNA_00748 CCNA_00750 SM00342 helix_turn_helix, arabinose operon control protein CCNA_00758 SM00841 Elongation factor P, C-terminal CCNA_00758 SM01185 CCNA_00758 CCNA_00760 SM00387 Histidine kinase-like ATPases CCNA_00760 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00760 SM00448 cheY-homologous receiver domain CCNA_00763 SM00893 Electron transfer flavoprotein domain CCNA_00764 SM00893 Electron transfer flavoprotein domain CCNA_00777 SM00052 Putative diguanylate phosphodiesterase CCNA_00777 SM00267 diguanylate cyclase CCNA_00781 SM00448 cheY-homologous receiver domain CCNA_00783 SM00235 Zinc-dependent metalloprotease CCNA_00789 SM00100 Cyclic nucleotide-monophosphate binding domain CCNA_00789 SM00419 helix_turn_helix, cAMP Regulatory protein CCNA_00795 SM00421 helix_turn_helix, Lux Regulon CCNA_00795 SM00448 cheY-homologous receiver domain CCNA_00796 SM00091 PAS domain CCNA_00796 SM00387 Histidine kinase-like ATPases CCNA_00796 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00798 SM00382 ATPases associated with a variety of cellular activities CCNA_00799 SM00382 ATPases associated with a variety of cellular activities CCNA_00803 SM00260 Two component signalling adaptor domain CCNA_00804 SM01022 CCNA_00804 CCNA_00809 SM00829 Enoylreductase CCNA_00823 SM00421 helix_turn_helix, Lux Regulon CCNA_00824 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_00824 SM00895 CCNA_00824 CCNA_00831 SM00758 CCNA_00831 CCNA_00837 SM00812 Alpha-L-fucosidase CCNA_00847 SM00344 helix_turn_helix ASNC type CCNA_00854 SM00849 Metallo-beta-lactamase superfamily CCNA_00854 SM01027 Beta-Casp domain CCNA_00878 SM00487 DEAD-like helicases superfamily CCNA_00878 SM00490 helicase superfamily c-terminal domain CCNA_00879 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_00879 SM00091 PAS domain CCNA_00879 SM00911 HWE histidine kinase CCNA_00881 SM00382 ATPases associated with a variety of cellular activities CCNA_00885 SM00966 SpoVT / AbrB like domain CCNA_00892 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CCNA_00898 SM00363 S4 RNA-binding domain CCNA_00899 SM00937 CCNA_00899 CCNA_00900 SM00052 Putative diguanylate phosphodiesterase CCNA_00900 SM00267 diguanylate cyclase CCNA_00903 SM00382 ATPases associated with a variety of cellular activities CCNA_00922 SM00382 ATPases associated with a variety of cellular activities CCNA_00922 SM01086 C-terminal, D2-small domain, of ClpB protein CCNA_00928 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_00928 SM00895 CCNA_00928 CCNA_00935 SM00342 helix_turn_helix, arabinose operon control protein CCNA_00940 SM00052 Putative diguanylate phosphodiesterase CCNA_00940 SM00267 diguanylate cyclase CCNA_00954 SM00382 ATPases associated with a variety of cellular activities CCNA_00954 SM00448 cheY-homologous receiver domain CCNA_00962 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_00965 SM00271 DnaJ molecular chaperone homology domain CCNA_00969 SM00387 Histidine kinase-like ATPases CCNA_00969 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00969 SM00448 cheY-homologous receiver domain CCNA_00971 SM00849 Metallo-beta-lactamase superfamily CCNA_00981 SM00382 ATPases associated with a variety of cellular activities CCNA_00983 SM00387 Histidine kinase-like ATPases CCNA_00983 SM00388 His Kinase A (phosphoacceptor) domain CCNA_00983 SM00448 cheY-homologous receiver domain CCNA_00989 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CCNA_01013 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_01013 SM00866 CCNA_01013 CCNA_01019 SM01217 CCNA_01019 CCNA_01020 SM00354 helix_turn _helix lactose operon repressor CCNA_01034 SM00965 Secretin and TonB N terminus short domain CCNA_01036 SM00631 CCNA_01036 CCNA_01037 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_01037 SM00895 CCNA_01037 CCNA_01050 SM00382 ATPases associated with a variety of cellular activities CCNA_01053 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CCNA_01058 SM00530 Helix-turn-helix XRE-family like proteins CCNA_01060 SM00382 ATPases associated with a variety of cellular activities CCNA_01075 SM00247 Beta/gamma crystallins CCNA_01076 SM00247 Beta/gamma crystallins CCNA_01086 SM00838 Elongation factor G C-terminus CCNA_01095 SM00873 B3/4 domain CCNA_01095 SM00874 tRNA synthetase B5 domain CCNA_01095 SM00896 Ferredoxin-fold anticodon binding domain CCNA_01111 SM00760 Bacterial dnaA protein helix-turn-helix domain CCNA_01113 SM00450 Rhodanese Homology Domain CCNA_01115 SM00387 Histidine kinase-like ATPases CCNA_01115 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01116 SM00387 Histidine kinase-like ATPases CCNA_01116 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01132 SM00387 Histidine kinase-like ATPases CCNA_01132 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01132 SM00448 cheY-homologous receiver domain CCNA_01134 SM00421 helix_turn_helix, Lux Regulon CCNA_01140 SM00052 Putative diguanylate phosphodiesterase CCNA_01141 SM00382 ATPases associated with a variety of cellular activities CCNA_01162 SM01217 CCNA_01162 CCNA_01164 SM00028 Tetratricopeptide repeats CCNA_01173 SM00830 Chorismate mutase type II CCNA_01189 SM00965 Secretin and TonB N terminus short domain CCNA_01193 SM00642 Alpha-amylase domain CCNA_01195 SM00354 helix_turn _helix lactose operon repressor CCNA_01205 SM00382 ATPases associated with a variety of cellular activities CCNA_01208 SM00421 helix_turn_helix, Lux Regulon CCNA_01208 SM00448 cheY-homologous receiver domain CCNA_01218 SM00046 Diacylglycerol kinase catalytic domain (presumed) CCNA_01222 SM00822 CCNA_01222 CCNA_01234 SM00849 Metallo-beta-lactamase superfamily CCNA_01239 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_01239 SM00387 Histidine kinase-like ATPases CCNA_01239 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01240 SM00448 cheY-homologous receiver domain CCNA_01240 SM00862 Transcriptional regulatory protein, C terminal CCNA_01241 SM00849 Metallo-beta-lactamase superfamily CCNA_01243 SM00487 DEAD-like helicases superfamily CCNA_01243 SM00490 helicase superfamily c-terminal domain CCNA_01243 SM00847 Helicase associated domain (HA2) Add an annotation CCNA_01245 SM00967 RNA 2'-O ribose methyltransferase substrate binding CCNA_01251 SM00382 ATPases associated with a variety of cellular activities CCNA_01253 SM01130 CCNA_01253 CCNA_01259 SM01007 Class II Aldolase and Adducin N-terminal domain CCNA_01263 SM00861 Transketolase, pyrimidine binding domain CCNA_01271 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_01297 SM00967 RNA 2'-O ribose methyltransferase substrate binding CCNA_01305 SM01403 CCNA_01305 CCNA_01309 SM01382 CCNA_01309 CCNA_01309 SM01383 CCNA_01309 CCNA_01312 SM00322 K homology RNA-binding domain CCNA_01316 SM01374 CCNA_01316 CCNA_01317 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CCNA_01330 SM00662 RNA polymerases D CCNA_01335 SM00382 ATPases associated with a variety of cellular activities CCNA_01339 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_01341 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_01342 SM00382 ATPases associated with a variety of cellular activities CCNA_01351 SM00448 cheY-homologous receiver domain CCNA_01351 SM00862 Transcriptional regulatory protein, C terminal CCNA_01352 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_01352 SM00387 Histidine kinase-like ATPases CCNA_01352 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01362 SM00448 cheY-homologous receiver domain CCNA_01362 SM00862 Transcriptional regulatory protein, C terminal CCNA_01363 SM00387 Histidine kinase-like ATPases CCNA_01374 SM00382 ATPases associated with a variety of cellular activities CCNA_01385 SM00363 S4 RNA-binding domain CCNA_01391 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_01394 SM00986 Uracil DNA glycosylase superfamily CCNA_01394 SM00987 UreE urease accessory protein, C-terminal domain CCNA_01396 SM00028 Tetratricopeptide repeats CCNA_01400 SM00938 Nitrogen regulatory protein P-II CCNA_01409 SM01004 Delta-aminolevulinic acid dehydratase CCNA_01413 SM00855 Phosphoglycerate mutase family CCNA_01426 SM00448 cheY-homologous receiver domain CCNA_01433 SM00411 bacterial (prokaryotic) histone like domain CCNA_01434 SM00422 helix_turn_helix, mercury resistance CCNA_01442 SM00859 Semialdehyde dehydrogenase, NAD binding domain CCNA_01451 SM00357 Cold shock protein domain CCNA_01465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_01476 SM00419 helix_turn_helix, cAMP Regulatory protein CCNA_01477 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_01478 SM00100 Cyclic nucleotide-monophosphate binding domain CCNA_01487 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_01487 SM00895 CCNA_01487 CCNA_01489 SM00813 Alpha-L-arabinofuranosidase C-terminus CCNA_01492 SM00450 Rhodanese Homology Domain CCNA_01504 SM00487 DEAD-like helicases superfamily CCNA_01504 SM00490 helicase superfamily c-terminal domain CCNA_01506 SM00382 ATPases associated with a variety of cellular activities CCNA_01508 SM00062 Bacterial periplasmic substrate-binding proteins CCNA_01508 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CCNA_01512 SM01321 CCNA_01512 CCNA_01522 SM00382 ATPases associated with a variety of cellular activities CCNA_01524 SM00028 Tetratricopeptide repeats CCNA_01546 SM00487 DEAD-like helicases superfamily CCNA_01546 SM00490 helicase superfamily c-terminal domain CCNA_01555 SM00858 CCNA_01555 CCNA_01556 SM00354 helix_turn _helix lactose operon repressor CCNA_01569 SM00342 helix_turn_helix, arabinose operon control protein CCNA_01573 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_01586 SM00382 ATPases associated with a variety of cellular activities CCNA_01590 SM00292 breast cancer carboxy-terminal domain CCNA_01590 SM00532 Ligase N family CCNA_01591 SM00479 CCNA_01591 CCNA_01609 SM00849 Metallo-beta-lactamase superfamily CCNA_01610 SM00917 LeuA allosteric (dimerisation) domain CCNA_01618 SM00986 Uracil DNA glycosylase superfamily CCNA_01618 SM00987 UreE urease accessory protein, C-terminal domain CCNA_01621 SM01409 CCNA_01621 CCNA_01622 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CCNA_01622 SM00954 Region found in RelA / SpoT proteins CCNA_01630 SM00358 Double-stranded RNA binding motif CCNA_01630 SM00535 Ribonuclease III family CCNA_01637 SM00434 DNA Topoisomerase IV CCNA_01640 SM00829 Enoylreductase CCNA_01651 SM00434 DNA Topoisomerase IV CCNA_01666 SM00387 Histidine kinase-like ATPases CCNA_01666 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01667 SM00448 cheY-homologous receiver domain CCNA_01667 SM00862 Transcriptional regulatory protein, C terminal CCNA_01670 SM00382 ATPases associated with a variety of cellular activities CCNA_01672 SM00460 Transglutaminase/protease-like homologues CCNA_01682 SM00850 LytTr DNA-binding domain CCNA_01685 SM00992 Hemimethylated DNA-binding protein YccV like CCNA_01689 SM00116 Domain in cystathionine beta-synthase and other proteins. CCNA_01689 SM01240 CCNA_01689 CCNA_01694 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CCNA_01697 SM00854 Bacterial capsule synthesis protein PGA_cap CCNA_01699 SM00354 helix_turn _helix lactose operon repressor CCNA_01711 SM00248 ankyrin repeats CCNA_01725 SM00564 beta-propeller repeat CCNA_01726 SM00382 ATPases associated with a variety of cellular activities CCNA_01727 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_01732 SM00382 ATPases associated with a variety of cellular activities CCNA_01733 SM01005 Alanine racemase, C-terminal domain CCNA_01737 SM00382 ATPases associated with a variety of cellular activities CCNA_01744 SM00342 helix_turn_helix, arabinose operon control protein CCNA_01746 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CCNA_01747 SM00822 CCNA_01747 CCNA_01750 SM00825 Beta-ketoacyl synthase CCNA_01753 SM00072 Guanylate kinase homologues. CCNA_01755 SM00911 HWE histidine kinase CCNA_01757 SM00650 Ribosomal RNA adenine dimethylases CCNA_01769 SM00382 ATPases associated with a variety of cellular activities CCNA_01770 SM00562 CCNA_01770 CCNA_01776 SM00341 Helicase and RNase D C-terminal CCNA_01776 SM00474 3'-5' exonuclease CCNA_01777 SM00387 Histidine kinase-like ATPases CCNA_01777 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01777 SM00448 cheY-homologous receiver domain CCNA_01795 SM01192 CCNA_01795 CCNA_01795 SM01193 CCNA_01795 CCNA_01800 SM00861 Transketolase, pyrimidine binding domain CCNA_01809 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_01814 SM00387 Histidine kinase-like ATPases CCNA_01814 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01815 SM00382 ATPases associated with a variety of cellular activities CCNA_01815 SM00448 cheY-homologous receiver domain CCNA_01816 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_01816 SM00387 Histidine kinase-like ATPases CCNA_01816 SM00388 His Kinase A (phosphoacceptor) domain CCNA_01817 SM00382 ATPases associated with a variety of cellular activities CCNA_01817 SM00448 cheY-homologous receiver domain CCNA_01829 SM00354 helix_turn _helix lactose operon repressor CCNA_01832 SM01217 CCNA_01832 CCNA_01835 SM00382 ATPases associated with a variety of cellular activities CCNA_01840 SM00530 Helix-turn-helix XRE-family like proteins CCNA_01845 SM00448 cheY-homologous receiver domain CCNA_01846 SM00387 Histidine kinase-like ATPases CCNA_01854 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_01854 SM00895 CCNA_01854 CCNA_01888 SM00346 helix_turn_helix isocitrate lyase regulation CCNA_01905 SM00796 Allophanate hydrolase subunit 1 CCNA_01905 SM00797 Allophanate hydrolase subunit 2 CCNA_01905 SM00878 Biotin carboxylase C-terminal domain CCNA_01907 SM00382 ATPases associated with a variety of cellular activities CCNA_01918 SM00267 diguanylate cyclase CCNA_01920 SM00487 DEAD-like helicases superfamily CCNA_01920 SM00490 helicase superfamily c-terminal domain CCNA_01920 SM00982 CCNA_01920 CCNA_01920 SM01058 CarD-like/TRCF domain CCNA_01923 SM00487 DEAD-like helicases superfamily CCNA_01923 SM00490 helicase superfamily c-terminal domain CCNA_01926 SM00267 diguanylate cyclase CCNA_01932 SM00563 Phosphate acyltransferases CCNA_01938 SM00382 ATPases associated with a variety of cellular activities CCNA_01944 SM00507 HNH nucleases CCNA_01950 SM00937 CCNA_01950 CCNA_01952 SM00646 CCNA_01952 CCNA_01961 SM00878 Biotin carboxylase C-terminal domain CCNA_01977 SM00563 Phosphate acyltransferases CCNA_01991 SM00935 Outer membrane protein (OmpH-like) CCNA_01993 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_02003 SM00481 DNA polymerase alpha chain like domain CCNA_02006 SM00382 ATPases associated with a variety of cellular activities CCNA_02012 SM00849 Metallo-beta-lactamase superfamily CCNA_02023 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CCNA_02024 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CCNA_02036 SM00411 bacterial (prokaryotic) histone like domain CCNA_02037 SM00382 ATPases associated with a variety of cellular activities CCNA_02037 SM00464 Found in ATP-dependent protease La (LON) CCNA_02039 SM00382 ATPases associated with a variety of cellular activities CCNA_02039 SM00994 ClpX C4-type zinc finger CCNA_02039 SM01086 C-terminal, D2-small domain, of ClpB protein CCNA_02044 SM00855 Phosphoglycerate mutase family CCNA_02046 SM00938 Nitrogen regulatory protein P-II CCNA_02047 SM01230 CCNA_02047 CCNA_02052 SM00387 Histidine kinase-like ATPases CCNA_02052 SM00433 TopoisomeraseII CCNA_02071 SM01323 CCNA_02071 CCNA_02073 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02075 SM00257 Lysin motif CCNA_02087 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CCNA_02095 SM00829 Enoylreductase CCNA_02108 SM00245 tail specific protease CCNA_02111 SM00028 Tetratricopeptide repeats CCNA_02118 SM00491 CCNA_02118 CCNA_02120 SM00671 Sel1-like repeats. CCNA_02121 SM00487 DEAD-like helicases superfamily CCNA_02121 SM00490 helicase superfamily c-terminal domain CCNA_02125 SM00671 Sel1-like repeats. CCNA_02132 SM00354 helix_turn _helix lactose operon repressor CCNA_02144 SM00858 CCNA_02144 CCNA_02149 SM00861 Transketolase, pyrimidine binding domain CCNA_02157 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02164 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCNA_02166 SM00986 Uracil DNA glycosylase superfamily CCNA_02166 SM00987 UreE urease accessory protein, C-terminal domain CCNA_02173 SM00382 ATPases associated with a variety of cellular activities CCNA_02178 SM00822 CCNA_02178 CCNA_02203 SM00867 YceI-like domain CCNA_02209 SM00829 Enoylreductase CCNA_02218 SM00271 DnaJ molecular chaperone homology domain CCNA_02221 SM01018 B12 binding domain CCNA_02223 SM00849 Metallo-beta-lactamase superfamily CCNA_02225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_02231 SM00382 ATPases associated with a variety of cellular activities CCNA_02245 SM00271 DnaJ molecular chaperone homology domain CCNA_02250 SM00878 Biotin carboxylase C-terminal domain CCNA_02253 SM00100 Cyclic nucleotide-monophosphate binding domain CCNA_02256 SM00924 MgtE intracellular N domain CCNA_02261 SM00878 Biotin carboxylase C-terminal domain CCNA_02270 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_02283 SM00507 HNH nucleases CCNA_02284 SM00478 endonuclease III CCNA_02299 SM00382 ATPases associated with a variety of cellular activities CCNA_02302 SM00563 Phosphate acyltransferases CCNA_02305 SM00830 Chorismate mutase type II CCNA_02315 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02332 SM00448 cheY-homologous receiver domain CCNA_02334 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02344 SM00855 Phosphoglycerate mutase family CCNA_02346 SM00116 Domain in cystathionine beta-synthase and other proteins. CCNA_02350 SM00886 Stress responsive A/B Barrel Domain CCNA_02352 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCNA_02355 SM00478 endonuclease III CCNA_02358 SM00903 Flavin reductase like domain CCNA_02364 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02364 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_02367 SM00354 helix_turn _helix lactose operon repressor CCNA_02368 SM00642 Alpha-amylase domain CCNA_02369 SM00642 Alpha-amylase domain CCNA_02401 SM00354 helix_turn _helix lactose operon repressor CCNA_02402 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_02404 SM00382 ATPases associated with a variety of cellular activities CCNA_02409 SM00387 Histidine kinase-like ATPases CCNA_02409 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02409 SM00448 cheY-homologous receiver domain CCNA_02415 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02416 SM00411 bacterial (prokaryotic) histone like domain CCNA_02417 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_02418 SM00986 Uracil DNA glycosylase superfamily CCNA_02418 SM00987 UreE urease accessory protein, C-terminal domain CCNA_02422 SM00822 CCNA_02422 CCNA_02429 SM00226 Low molecular weight phosphatase family CCNA_02438 SM00829 Enoylreductase CCNA_02440 SM00354 helix_turn _helix lactose operon repressor CCNA_02453 SM00226 Low molecular weight phosphatase family CCNA_02464 SM00984 UDP binding domain CCNA_02465 SM00984 UDP binding domain CCNA_02474 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_02475 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_02475 SM00895 CCNA_02475 CCNA_02479 SM00829 Enoylreductase CCNA_02482 SM00342 helix_turn_helix, arabinose operon control protein CCNA_02486 SM00342 helix_turn_helix, arabinose operon control protein CCNA_02488 SM00882 Coenzyme A transferase CCNA_02489 SM00882 Coenzyme A transferase CCNA_02505 SM00382 ATPases associated with a variety of cellular activities CCNA_02518 SM00845 GatB domain CCNA_02521 SM00732 Likely ribonuclease with RNase H fold. CCNA_02528 SM01207 CCNA_02528 CCNA_02535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CCNA_02535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CCNA_02535 SM00493 CCNA_02535 CCNA_02537 SM00316 Ribosomal protein S1-like RNA-binding domain CCNA_02537 SM00955 CCNA_02537 CCNA_02546 SM00267 diguanylate cyclase CCNA_02546 SM00448 cheY-homologous receiver domain CCNA_02547 SM00448 cheY-homologous receiver domain CCNA_02553 SM00382 ATPases associated with a variety of cellular activities CCNA_02553 SM01086 C-terminal, D2-small domain, of ClpB protein CCNA_02562 SM00671 Sel1-like repeats. CCNA_02567 SM00091 PAS domain CCNA_02567 SM00387 Histidine kinase-like ATPases CCNA_02567 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02568 SM00382 ATPases associated with a variety of cellular activities CCNA_02572 SM00998 Adenylosuccinate lyase C-terminus CCNA_02573 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CCNA_02574 SM00986 Uracil DNA glycosylase superfamily CCNA_02574 SM00987 UreE urease accessory protein, C-terminal domain CCNA_02583 SM01211 CCNA_02583 CCNA_02587 SM00387 Histidine kinase-like ATPases CCNA_02587 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02587 SM00448 cheY-homologous receiver domain CCNA_02596 SM00363 S4 RNA-binding domain CCNA_02596 SM01390 CCNA_02596 CCNA_02606 SM00387 Histidine kinase-like ATPases CCNA_02606 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02606 SM00448 cheY-homologous receiver domain CCNA_02607 SM01329 CCNA_02607 CCNA_02611 SM00342 helix_turn_helix, arabinose operon control protein CCNA_02611 SM00871 Bacterial transcription activator, effector binding domain CCNA_02612 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CCNA_02618 SM00344 helix_turn_helix ASNC type CCNA_02623 SM00864 Tubulin/FtsZ family, GTPase domain CCNA_02623 SM00865 Tubulin/FtsZ family, C-terminal domain CCNA_02624 SM00842 Cell division protein FtsA CCNA_02637 SM00911 HWE histidine kinase CCNA_02650 SM00644 CCNA_02650 CCNA_02656 SM00342 helix_turn_helix, arabinose operon control protein CCNA_02659 SM00448 cheY-homologous receiver domain CCNA_02670 SM00382 ATPases associated with a variety of cellular activities CCNA_02692 SM00867 YceI-like domain CCNA_02701 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCNA_02702 SM01092 CO dehydrogenase flavoprotein C-terminal domain CCNA_02704 SM00919 Malic enzyme, NAD binding domain CCNA_02704 SM01274 CCNA_02704 CCNA_02705 SM00357 Cold shock protein domain CCNA_02709 SM00116 Domain in cystathionine beta-synthase and other proteins. CCNA_02714 SM00382 ATPases associated with a variety of cellular activities CCNA_02715 SM00387 Histidine kinase-like ATPases CCNA_02715 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02715 SM00448 cheY-homologous receiver domain CCNA_02717 SM00382 ATPases associated with a variety of cellular activities CCNA_02734 SM00971 Serine acetyltransferase, N-terminal CCNA_02738 SM00822 CCNA_02738 CCNA_02744 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_02744 SM00895 CCNA_02744 CCNA_02751 SM00382 ATPases associated with a variety of cellular activities CCNA_02751 SM00930 CCNA_02751 CCNA_02752 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CCNA_02752 SM00091 PAS domain CCNA_02752 SM00387 Histidine kinase-like ATPases CCNA_02752 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02752 SM00448 cheY-homologous receiver domain CCNA_02755 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02756 SM00852 Probable molybdopterin binding domain CCNA_02773 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02779 SM00257 Lysin motif CCNA_02785 SM00100 Cyclic nucleotide-monophosphate binding domain CCNA_02788 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02789 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02792 SM00965 Secretin and TonB N terminus short domain CCNA_02798 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_02822 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02838 SM00054 EF-hand, calcium binding motif CCNA_02842 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_02842 SM00387 Histidine kinase-like ATPases CCNA_02845 SM00448 cheY-homologous receiver domain CCNA_02845 SM00862 Transcriptional regulatory protein, C terminal CCNA_02846 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_02853 SM00387 Histidine kinase-like ATPases CCNA_02854 SM00448 cheY-homologous receiver domain CCNA_02854 SM00862 Transcriptional regulatory protein, C terminal CCNA_02859 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02860 SM00271 DnaJ molecular chaperone homology domain CCNA_02894 SM00633 Glycosyl hydrolase family 10 CCNA_02901 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02903 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CCNA_02904 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_02904 SM00895 CCNA_02904 CCNA_02909 SM00028 Tetratricopeptide repeats CCNA_02912 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CCNA_02925 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CCNA_02929 SM00829 Enoylreductase CCNA_02935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_02940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_02945 SM00091 PAS domain CCNA_02945 SM00387 Histidine kinase-like ATPases CCNA_02945 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02945 SM00448 cheY-homologous receiver domain CCNA_02956 SM00450 Rhodanese Homology Domain CCNA_02957 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_02959 SM00849 Metallo-beta-lactamase superfamily CCNA_02960 SM00530 Helix-turn-helix XRE-family like proteins CCNA_02961 SM00858 CCNA_02961 CCNA_02967 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_02967 SM00091 PAS domain CCNA_02967 SM00387 Histidine kinase-like ATPases CCNA_02967 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02967 SM00448 cheY-homologous receiver domain CCNA_02975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CCNA_02975 SM00465 GIY-YIG type nucleases (URI domain) CCNA_02978 SM00387 Histidine kinase-like ATPases CCNA_02978 SM00388 His Kinase A (phosphoacceptor) domain CCNA_02981 SM00344 helix_turn_helix ASNC type CCNA_02994 SM00851 MGS-like domain CCNA_02994 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCNA_02997 SM00357 Cold shock protein domain CCNA_03003 SM00911 HWE histidine kinase CCNA_03016 SM00421 helix_turn_helix, Lux Regulon CCNA_03025 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_03026 SM00448 cheY-homologous receiver domain CCNA_03026 SM00862 Transcriptional regulatory protein, C terminal CCNA_03027 SM00387 Histidine kinase-like ATPases CCNA_03027 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03033 SM00028 Tetratricopeptide repeats CCNA_03040 SM00749 bacterial OsmY and nodulation domain CCNA_03041 SM00858 CCNA_03041 CCNA_03054 SM00342 helix_turn_helix, arabinose operon control protein CCNA_03066 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CCNA_03066 SM00387 Histidine kinase-like ATPases CCNA_03066 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03066 SM00448 cheY-homologous receiver domain CCNA_03076 SM00487 DEAD-like helicases superfamily CCNA_03076 SM00490 helicase superfamily c-terminal domain CCNA_03083 SM00387 Histidine kinase-like ATPases CCNA_03083 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03083 SM00448 cheY-homologous receiver domain CCNA_03087 SM00989 CCNA_03087 CCNA_03088 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CCNA_03088 SM00387 Histidine kinase-like ATPases CCNA_03088 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03088 SM00448 cheY-homologous receiver domain CCNA_03105 SM00271 DnaJ molecular chaperone homology domain CCNA_03110 SM00448 cheY-homologous receiver domain CCNA_03112 SM00116 Domain in cystathionine beta-synthase and other proteins. CCNA_03112 SM01091 Transporter associated domain CCNA_03113 SM00014 Acid phosphatase homologues CCNA_03120 SM00260 Two component signalling adaptor domain CCNA_03123 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_03124 SM00829 Enoylreductase CCNA_03130 SM00448 cheY-homologous receiver domain CCNA_03130 SM00862 Transcriptional regulatory protein, C terminal CCNA_03131 SM00850 LytTr DNA-binding domain CCNA_03135 SM00382 ATPases associated with a variety of cellular activities CCNA_03137 SM00633 Glycosyl hydrolase family 10 CCNA_03143 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_03143 SM00091 PAS domain CCNA_03143 SM00911 HWE histidine kinase CCNA_03144 SM00400 zinc finger CCNA_03144 SM00493 CCNA_03144 CCNA_03146 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_03149 SM01217 CCNA_03149 CCNA_03154 SM00091 PAS domain CCNA_03154 SM00448 cheY-homologous receiver domain CCNA_03154 SM00911 HWE histidine kinase CCNA_03161 SM00354 helix_turn _helix lactose operon repressor CCNA_03164 SM00957 SecA DEAD-like domain CCNA_03164 SM00958 SecA preprotein cross-linking domain CCNA_03166 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CCNA_03171 SM00387 Histidine kinase-like ATPases CCNA_03171 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03171 SM00448 cheY-homologous receiver domain CCNA_03178 SM00422 helix_turn_helix, mercury resistance CCNA_03181 SM00829 Enoylreductase CCNA_03191 SM00052 Putative diguanylate phosphodiesterase CCNA_03191 SM00267 diguanylate cyclase CCNA_03198 SM00448 cheY-homologous receiver domain CCNA_03200 SM00387 Histidine kinase-like ATPases CCNA_03200 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03200 SM00448 cheY-homologous receiver domain CCNA_03201 SM00788 Adenylosuccinate synthetase CCNA_03204 SM01119 CCNA_03204 CCNA_03211 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CCNA_03215 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_03228 SM00028 Tetratricopeptide repeats CCNA_03230 SM01230 CCNA_03230 CCNA_03235 SM00382 ATPases associated with a variety of cellular activities CCNA_03240 SM01230 CCNA_03240 CCNA_03244 SM00345 helix_turn_helix gluconate operon transcriptional repressor CCNA_03244 SM00895 CCNA_03244 CCNA_03247 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_03247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_03250 SM00052 Putative diguanylate phosphodiesterase CCNA_03257 SM00448 cheY-homologous receiver domain CCNA_03265 SM00387 Histidine kinase-like ATPases CCNA_03265 SM00448 cheY-homologous receiver domain CCNA_03267 SM00530 Helix-turn-helix XRE-family like proteins CCNA_03270 SM00344 helix_turn_helix ASNC type CCNA_03272 SM00091 PAS domain CCNA_03272 SM00911 HWE histidine kinase CCNA_03281 SM00344 helix_turn_helix ASNC type CCNA_03295 SM00387 Histidine kinase-like ATPases CCNA_03295 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03295 SM00448 cheY-homologous receiver domain CCNA_03302 SM00387 Histidine kinase-like ATPases CCNA_03304 SM00838 Elongation factor G C-terminus CCNA_03304 SM00889 Elongation factor G, domain IV CCNA_03310 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CCNA_03310 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CCNA_03315 SM00852 Probable molybdopterin binding domain CCNA_03317 SM00481 DNA polymerase alpha chain like domain CCNA_03320 SM00878 Biotin carboxylase C-terminal domain CCNA_03326 SM00387 Histidine kinase-like ATPases CCNA_03326 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03326 SM00448 cheY-homologous receiver domain CCNA_03333 SM00387 Histidine kinase-like ATPases CCNA_03333 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03333 SM00448 cheY-homologous receiver domain CCNA_03334 SM00382 ATPases associated with a variety of cellular activities CCNA_03344 SM00382 ATPases associated with a variety of cellular activities CCNA_03358 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCNA_03367 SM00448 cheY-homologous receiver domain CCNA_03379 SM00530 Helix-turn-helix XRE-family like proteins CCNA_03383 SM00382 ATPases associated with a variety of cellular activities CCNA_03389 SM00382 ATPases associated with a variety of cellular activities CCNA_03391 SM00530 Helix-turn-helix XRE-family like proteins CCNA_03393 SM01001 AIR carboxylase CCNA_03394 SM00267 diguanylate cyclase CCNA_03395 SM00448 cheY-homologous receiver domain CCNA_03402 SM00829 Enoylreductase CCNA_03408 SM00382 ATPases associated with a variety of cellular activities CCNA_03414 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CCNA_03414 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CCNA_03424 SM00382 ATPases associated with a variety of cellular activities CCNA_03424 SM00448 cheY-homologous receiver domain CCNA_03434 SM00448 cheY-homologous receiver domain CCNA_03434 SM00862 Transcriptional regulatory protein, C terminal CCNA_03436 SM00387 Histidine kinase-like ATPases CCNA_03436 SM01080 CCNA_03436 CCNA_03457 SM00752 Horizontally Transferred TransMembrane Domain CCNA_03459 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CCNA_03459 SM00091 PAS domain CCNA_03459 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_03468 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CCNA_03468 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CCNA_03469 SM00836 DALR anticodon binding domain CCNA_03469 SM01016 Arginyl tRNA synthetase N terminal dom CCNA_03474 SM00966 SpoVT / AbrB like domain CCNA_03477 SM00450 Rhodanese Homology Domain CCNA_03478 SM00342 helix_turn_helix, arabinose operon control protein CCNA_03481 SM00857 Resolvase, N terminal domain CCNA_03483 SM00382 ATPases associated with a variety of cellular activities CCNA_03485 SM00244 prohibitin homologues CCNA_03502 SM00867 YceI-like domain CCNA_03503 SM00867 YceI-like domain CCNA_03507 SM00052 Putative diguanylate phosphodiesterase CCNA_03507 SM00267 diguanylate cyclase CCNA_03533 SM00382 ATPases associated with a variety of cellular activities CCNA_03548 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CCNA_03548 SM00245 tail specific protease CCNA_03560 SM00382 ATPases associated with a variety of cellular activities CCNA_03577 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CCNA_03577 SM00474 3'-5' exonuclease CCNA_03577 SM00475 5'-3' exonuclease CCNA_03577 SM00482 DNA polymerase A domain CCNA_03578 SM00341 Helicase and RNase D C-terminal CCNA_03578 SM00487 DEAD-like helicases superfamily CCNA_03578 SM00490 helicase superfamily c-terminal domain CCNA_03578 SM00956 CCNA_03578 CCNA_03585 SM00448 cheY-homologous receiver domain CCNA_03586 SM00138 Methyltransferase, chemotaxis proteins CCNA_03591 SM00448 cheY-homologous receiver domain CCNA_03598 SM00387 Histidine kinase-like ATPases CCNA_03598 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03599 SM00859 Semialdehyde dehydrogenase, NAD binding domain CCNA_03621 SM00342 helix_turn_helix, arabinose operon control protein CCNA_03636 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_03636 SM00876 Biotin and Thiamin Synthesis associated domain CCNA_03637 SM00880 CCNA_03637 CCNA_03637 SM01118 CCNA_03637 CCNA_03647 SM00563 Phosphate acyltransferases CCNA_03663 SM00919 Malic enzyme, NAD binding domain CCNA_03663 SM01274 CCNA_03663 CCNA_03675 SM00448 cheY-homologous receiver domain CCNA_03675 SM00911 HWE histidine kinase CCNA_03681 SM00382 ATPases associated with a variety of cellular activities CCNA_03684 SM00947 Carbonic anhydrase CCNA_03686 SM01359 CCNA_03686 CCNA_03686 SM01360 CCNA_03686 CCNA_03687 SM00947 Carbonic anhydrase CCNA_03688 SM00344 helix_turn_helix ASNC type CCNA_03689 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CCNA_03689 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CCNA_03701 SM00411 bacterial (prokaryotic) histone like domain CCNA_03702 SM00316 Ribosomal protein S1-like RNA-binding domain CCNA_03714 SM00382 ATPases associated with a variety of cellular activities CCNA_03717 SM00474 3'-5' exonuclease CCNA_03735 SM00861 Transketolase, pyrimidine binding domain CCNA_03737 SM01152 CCNA_03737 CCNA_03738 SM00387 Histidine kinase-like ATPases CCNA_03738 SM00388 His Kinase A (phosphoacceptor) domain CCNA_03738 SM00448 cheY-homologous receiver domain CCNA_03768 SM00382 ATPases associated with a variety of cellular activities CCNA_03768 SM00962 SRP54-type protein, GTPase domain CCNA_03768 SM00963 SRP54-type protein, helical bundle domain CCNA_03782 SM00382 ATPases associated with a variety of cellular activities CCNA_03791 SM00347 helix_turn_helix multiple antibiotic resistance protein CCNA_03793 SM00382 ATPases associated with a variety of cellular activities CCNA_03793 SM00962 SRP54-type protein, GTPase domain CCNA_03793 SM00963 SRP54-type protein, helical bundle domain CCNA_03798 SM00729 Elongator protein 3, MiaB family, Radical SAM CCNA_03810 SM00382 ATPases associated with a variety of cellular activities CCNA_03819 SM00843 CCNA_03819 CCNA_03822 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CCNA_03822 SM01232 CCNA_03822 CCNA_03834 SM00028 Tetratricopeptide repeats CCNA_03835 SM00825 Beta-ketoacyl synthase CCNA_03844 SM00382 ATPases associated with a variety of cellular activities CCNA_03844 SM01086 C-terminal, D2-small domain, of ClpB protein CCNA_03845 SM00342 helix_turn_helix, arabinose operon control protein CCNA_03847 SM00478 endonuclease III CCNA_03847 SM00525 CCNA_03847 CCNA_03855 SM00463 Small MutS-related domain CCNA_03856 SM00925 MltA specific insert domain CCNA_03857 SM00978 CCNA_03857 CCNA_03859 SM00448 cheY-homologous receiver domain CCNA_03859 SM00862 Transcriptional regulatory protein, C terminal CCNA_03868 SM00470 ParB-like nuclease domain CCNA_03871 SM01228 CCNA_03871 CCNA_03875 SM00829 Enoylreductase CCNA_03876 SM00357 Cold shock protein domain CCNA_03876 SM00382 ATPases associated with a variety of cellular activities CCNA_03876 SM00959 Rho termination factor, N-terminal domain CCNA_03892 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CCNA_03989 SM00347 helix_turn_helix multiple antibiotic resistance protein