CO704_RS00045	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00055	SM00822	CO704_RS00055
CO704_RS00070	SM00825	Beta-ketoacyl synthase
CO704_RS00080	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00110	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS00110	SM01134	CO704_RS00110
CO704_RS00120	SM01133	CO704_RS00120
CO704_RS00125	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS00125	SM01134	CO704_RS00125
CO704_RS00240	SM00869	Autotransporter beta-domain
CO704_RS00265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS00335	SM00014	Acid phosphatase homologues
CO704_RS00370	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS00370	SM01134	CO704_RS00370
CO704_RS00400	SM00965	Secretin and TonB N terminus short domain
CO704_RS00415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS00445	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS00460	SM00354	helix_turn _helix lactose operon repressor
CO704_RS00495	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00495	SM00962	SRP54-type protein, GTPase domain
CO704_RS00495	SM00963	SRP54-type protein, helical bundle domain
CO704_RS00500	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS00560	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00565	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00585	SM00382	ATPases associated with a variety of cellular activities
CO704_RS00620	SM00354	helix_turn _helix lactose operon repressor
CO704_RS00645	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CO704_RS00650	SM00642	Alpha-amylase domain
CO704_RS00655	SM00642	Alpha-amylase domain
CO704_RS00675	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS00675	SM01134	CO704_RS00675
CO704_RS00685	SM00450	Rhodanese Homology Domain
CO704_RS00695	SM00421	helix_turn_helix, Lux Regulon
CO704_RS00740	SM00899	CO704_RS00740
CO704_RS00745	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS00745	SM00732	Likely ribonuclease with RNase H fold.
CO704_RS00755	SM00448	cheY-homologous receiver domain
CO704_RS00755	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS00760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS00760	SM00387	Histidine kinase-like ATPases
CO704_RS00760	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS00780	SM00363	S4 RNA-binding domain
CO704_RS00825	SM00965	Secretin and TonB N terminus short domain
CO704_RS00970	SM00100	Cyclic nucleotide-monophosphate binding domain
CO704_RS00970	SM00419	helix_turn_helix, cAMP Regulatory protein
CO704_RS01000	SM00382	ATPases associated with a variety of cellular activities
CO704_RS01065	SM00838	Elongation factor G C-terminus
CO704_RS01065	SM00889	Elongation factor G, domain IV
CO704_RS01090	SM01403	CO704_RS01090
CO704_RS01110	SM01382	CO704_RS01110
CO704_RS01110	SM01383	CO704_RS01110
CO704_RS01125	SM00322	K homology RNA-binding domain
CO704_RS01145	SM01374	CO704_RS01145
CO704_RS01150	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CO704_RS01215	SM00363	S4 RNA-binding domain
CO704_RS01215	SM01390	CO704_RS01215
CO704_RS01220	SM00662	RNA polymerases D
CO704_RS01235	SM00422	helix_turn_helix, mercury resistance
CO704_RS01340	SM00382	ATPases associated with a variety of cellular activities
CO704_RS01355	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS01390	SM00878	Biotin carboxylase C-terminal domain
CO704_RS01420	SM00829	Enoylreductase
CO704_RS01425	SM00052	Putative diguanylate phosphodiesterase
CO704_RS01425	SM00267	diguanylate cyclase
CO704_RS01455	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS01520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO704_RS01525	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO704_RS01575	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS01580	SM00073	Histidine Phosphotransfer domain
CO704_RS01580	SM00091	PAS domain
CO704_RS01580	SM00387	Histidine kinase-like ATPases
CO704_RS01580	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS01580	SM00448	cheY-homologous receiver domain
CO704_RS01635	SM00382	ATPases associated with a variety of cellular activities
CO704_RS01670	SM00382	ATPases associated with a variety of cellular activities
CO704_RS01735	SM00387	Histidine kinase-like ATPases
CO704_RS01735	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS01740	SM00448	cheY-homologous receiver domain
CO704_RS01740	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS01755	SM01103	CO704_RS01755
CO704_RS01765	SM00382	ATPases associated with a variety of cellular activities
CO704_RS01800	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS01820	SM01387	CO704_RS01820
CO704_RS01825	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS01825	SM00322	K homology RNA-binding domain
CO704_RS01830	SM00028	Tetratricopeptide repeats
CO704_RS01835	SM00487	DEAD-like helicases superfamily
CO704_RS01835	SM00490	helicase superfamily c-terminal domain
CO704_RS01870	SM00465	GIY-YIG type nucleases (URI domain)
CO704_RS01925	SM00642	Alpha-amylase domain
CO704_RS01935	SM00354	helix_turn _helix lactose operon repressor
CO704_RS01940	SM00831	Cation transporter/ATPase, N-terminus
CO704_RS02010	SM00421	helix_turn_helix, Lux Regulon
CO704_RS02010	SM00448	cheY-homologous receiver domain
CO704_RS02015	SM00387	Histidine kinase-like ATPases
CO704_RS02080	SM01120	CO704_RS02080
CO704_RS02085	SM00829	Enoylreductase
CO704_RS02130	SM00487	DEAD-like helicases superfamily
CO704_RS02215	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS02225	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS02230	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS02275	SM00100	Cyclic nucleotide-monophosphate binding domain
CO704_RS02275	SM00419	helix_turn_helix, cAMP Regulatory protein
CO704_RS02320	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS02325	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02375	SM00421	helix_turn_helix, Lux Regulon
CO704_RS02375	SM00448	cheY-homologous receiver domain
CO704_RS02385	SM00052	Putative diguanylate phosphodiesterase
CO704_RS02390	SM00421	helix_turn_helix, Lux Regulon
CO704_RS02395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS02395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS02395	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS02465	SM00387	Histidine kinase-like ATPases
CO704_RS02465	SM00433	TopoisomeraseII
CO704_RS02480	SM00387	Histidine kinase-like ATPases
CO704_RS02480	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS02485	SM00448	cheY-homologous receiver domain
CO704_RS02485	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS02495	SM00434	DNA Topoisomerase IV
CO704_RS02500	SM00563	Phosphate acyltransferases
CO704_RS02510	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS02535	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02550	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS02625	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02685	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02695	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS02710	SM00470	ParB-like nuclease domain
CO704_RS02745	SM00478	endonuclease III
CO704_RS02745	SM00525	CO704_RS02745
CO704_RS02765	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS02775	SM01152	CO704_RS02775
CO704_RS02790	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02805	SM00732	Likely ribonuclease with RNase H fold.
CO704_RS02830	SM00731	SprT homologues.
CO704_RS02860	SM00382	ATPases associated with a variety of cellular activities
CO704_RS02900	SM00861	Transketolase, pyrimidine binding domain
CO704_RS02905	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CO704_RS02995	SM01011	Aminopeptidase P, N-terminal domain
CO704_RS03045	SM00448	cheY-homologous receiver domain
CO704_RS03045	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS03050	SM00387	Histidine kinase-like ATPases
CO704_RS03050	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS03120	SM00257	Lysin motif
CO704_RS03150	SM00563	Phosphate acyltransferases
CO704_RS03165	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS03200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS03205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS03205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS03240	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS03300	SM00354	helix_turn _helix lactose operon repressor
CO704_RS03310	SM00354	helix_turn _helix lactose operon repressor
CO704_RS03315	SM00563	Phosphate acyltransferases
CO704_RS03335	SM00927	DNA mismatch repair enzyme MutH
CO704_RS03350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS03410	SM00646	CO704_RS03410
CO704_RS03430	SM00925	MltA specific insert domain
CO704_RS03470	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CO704_RS03470	SM00475	5'-3' exonuclease
CO704_RS03520	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS03525	SM00849	Metallo-beta-lactamase superfamily
CO704_RS03535	SM00073	Histidine Phosphotransfer domain
CO704_RS03535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS03535	SM00387	Histidine kinase-like ATPases
CO704_RS03535	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS03535	SM00448	cheY-homologous receiver domain
CO704_RS03545	SM00954	Region found in RelA / SpoT proteins
CO704_RS03560	SM01192	CO704_RS03560
CO704_RS03560	SM01193	CO704_RS03560
CO704_RS03565	SM00829	Enoylreductase
CO704_RS03615	SM00893	Electron transfer flavoprotein domain
CO704_RS03725	SM00257	Lysin motif
CO704_RS03735	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CO704_RS03735	SM00534	ATPase domain of DNA mismatch repair MUTS family
CO704_RS03745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS03750	SM01060	CO704_RS03750
CO704_RS03790	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO704_RS03795	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS03795	SM01134	CO704_RS03795
CO704_RS03825	SM00382	ATPases associated with a variety of cellular activities
CO704_RS03845	SM00382	ATPases associated with a variety of cellular activities
CO704_RS03855	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CO704_RS03910	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS03915	SM00917	LeuA allosteric (dimerisation) domain
CO704_RS03930	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS03950	SM00382	ATPases associated with a variety of cellular activities
CO704_RS03985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS04015	SM00450	Rhodanese Homology Domain
CO704_RS04020	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO704_RS04025	SM00855	Phosphoglycerate mutase family
CO704_RS04030	SM00869	Autotransporter beta-domain
CO704_RS04035	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS04050	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS04090	SM00271	DnaJ molecular chaperone homology domain
CO704_RS04125	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS04150	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04260	SM00831	Cation transporter/ATPase, N-terminus
CO704_RS04330	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04380	SM01091	Transporter associated domain
CO704_RS04390	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04390	SM00962	SRP54-type protein, GTPase domain
CO704_RS04390	SM00963	SRP54-type protein, helical bundle domain
CO704_RS04420	SM00267	diguanylate cyclase
CO704_RS04435	SM00830	Chorismate mutase type II
CO704_RS04445	SM00830	Chorismate mutase type II
CO704_RS04465	SM00363	S4 RNA-binding domain
CO704_RS04475	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04475	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS04510	SM00155	Phospholipase D. Active site motifs.
CO704_RS04515	SM00881	CoA binding domain
CO704_RS04520	SM01144	CO704_RS04520
CO704_RS04530	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CO704_RS04535	SM00986	Uracil DNA glycosylase superfamily
CO704_RS04535	SM00987	UreE urease accessory protein, C-terminal domain 
CO704_RS04555	SM00487	DEAD-like helicases superfamily
CO704_RS04555	SM00490	helicase superfamily c-terminal domain
CO704_RS04610	SM00358	Double-stranded RNA binding motif
CO704_RS04610	SM00535	Ribonuclease III family
CO704_RS04640	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS04760	SM00857	Resolvase, N terminal domain
CO704_RS04780	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS04785	SM01211	CO704_RS04785
CO704_RS04790	SM00387	Histidine kinase-like ATPases
CO704_RS04790	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS04800	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04800	SM00448	cheY-homologous receiver domain
CO704_RS04805	SM00938	Nitrogen regulatory protein P-II
CO704_RS04840	SM00382	ATPases associated with a variety of cellular activities
CO704_RS04860	SM00028	Tetratricopeptide repeats
CO704_RS04925	SM00271	DnaJ molecular chaperone homology domain
CO704_RS04955	SM00450	Rhodanese Homology Domain
CO704_RS04960	SM01359	CO704_RS04960
CO704_RS04960	SM01360	CO704_RS04960
CO704_RS04970	SM00562	CO704_RS04970
CO704_RS04980	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS05000	SM00564	beta-propeller repeat
CO704_RS05035	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO704_RS05035	SM01240	CO704_RS05035
CO704_RS05045	SM00507	HNH nucleases
CO704_RS05060	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS05100	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05145	SM00052	Putative diguanylate phosphodiesterase
CO704_RS05145	SM00267	diguanylate cyclase
CO704_RS05225	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05240	SM00849	Metallo-beta-lactamase superfamily
CO704_RS05245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS05245	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05260	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS05265	SM00052	Putative diguanylate phosphodiesterase
CO704_RS05270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS05270	SM00866	CO704_RS05270
CO704_RS05275	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CO704_RS05285	SM00354	helix_turn _helix lactose operon repressor
CO704_RS05290	SM00640	Glycosyl hydrolases family 32
CO704_RS05305	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS05320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS05340	SM01266	CO704_RS05340
CO704_RS05395	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05415	SM00493	CO704_RS05415
CO704_RS05420	SM00387	Histidine kinase-like ATPases
CO704_RS05475	SM00422	helix_turn_helix, mercury resistance
CO704_RS05485	SM00244	prohibitin homologues
CO704_RS05500	SM00822	CO704_RS05500
CO704_RS05510	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05525	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS05540	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05540	SM00930	CO704_RS05540
CO704_RS05575	SM00450	Rhodanese Homology Domain
CO704_RS05585	SM01001	AIR carboxylase
CO704_RS05605	SM00840	CO704_RS05605
CO704_RS05650	SM01130	CO704_RS05650
CO704_RS05700	SM00421	helix_turn_helix, Lux Regulon
CO704_RS05700	SM00448	cheY-homologous receiver domain
CO704_RS05705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS05705	SM00387	Histidine kinase-like ATPases
CO704_RS05720	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS05745	SM00861	Transketolase, pyrimidine binding domain
CO704_RS05755	SM00919	Malic enzyme, NAD binding domain
CO704_RS05755	SM01274	CO704_RS05755
CO704_RS05765	SM00646	CO704_RS05765
CO704_RS05805	SM00382	ATPases associated with a variety of cellular activities
CO704_RS05815	SM00835	Cupin
CO704_RS05850	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CO704_RS05855	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO704_RS05855	SM00292	breast cancer carboxy-terminal domain
CO704_RS05855	SM00532	Ligase N family
CO704_RS05935	SM00052	Putative diguanylate phosphodiesterase
CO704_RS05935	SM00267	diguanylate cyclase
CO704_RS05940	SM00267	diguanylate cyclase
CO704_RS05980	SM00448	cheY-homologous receiver domain
CO704_RS05980	SM00850	LytTr DNA-binding domain
CO704_RS05985	SM00387	Histidine kinase-like ATPases
CO704_RS06015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS06015	SM00895	CO704_RS06015
CO704_RS06030	SM00796	Allophanate hydrolase subunit 1
CO704_RS06030	SM00797	Allophanate hydrolase subunit 2
CO704_RS06035	SM00878	Biotin carboxylase C-terminal domain
CO704_RS06055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS06055	SM00895	CO704_RS06055
CO704_RS06115	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS06185	SM00382	ATPases associated with a variety of cellular activities
CO704_RS06230	SM00244	prohibitin homologues
CO704_RS06235	SM00244	prohibitin homologues
CO704_RS06240	SM00244	prohibitin homologues
CO704_RS06280	SM00463	Small MutS-related domain
CO704_RS06320	SM00825	Beta-ketoacyl synthase
CO704_RS06340	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CO704_RS06385	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS06390	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS06405	SM00382	ATPases associated with a variety of cellular activities
CO704_RS06435	SM00905	Dihydroneopterin aldolase
CO704_RS06460	SM00354	helix_turn _helix lactose operon repressor
CO704_RS06490	SM00861	Transketolase, pyrimidine binding domain
CO704_RS06525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS06565	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CO704_RS06570	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS06570	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CO704_RS06650	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CO704_RS06660	SM01060	CO704_RS06660
CO704_RS06670	SM00852	Probable molybdopterin binding domain
CO704_RS06720	SM00434	DNA Topoisomerase IV
CO704_RS06725	SM00387	Histidine kinase-like ATPases
CO704_RS06725	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS06725	SM00448	cheY-homologous receiver domain
CO704_RS06730	SM00421	helix_turn_helix, Lux Regulon
CO704_RS06730	SM00448	cheY-homologous receiver domain
CO704_RS06735	SM00387	Histidine kinase-like ATPases
CO704_RS06755	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS06765	SM00382	ATPases associated with a variety of cellular activities
CO704_RS06770	SM00924	MgtE intracellular N domain
CO704_RS06805	SM00487	DEAD-like helicases superfamily
CO704_RS06805	SM00490	helicase superfamily c-terminal domain
CO704_RS06810	SM00363	S4 RNA-binding domain
CO704_RS06825	SM00382	ATPases associated with a variety of cellular activities
CO704_RS06845	SM00052	Putative diguanylate phosphodiesterase
CO704_RS06860	SM00014	Acid phosphatase homologues
CO704_RS06875	SM00841	Elongation factor P, C-terminal
CO704_RS06875	SM01185	CO704_RS06875
CO704_RS06930	SM00518	AP endonuclease family 2
CO704_RS06945	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS06960	SM00382	ATPases associated with a variety of cellular activities
CO704_RS06980	SM00382	ATPases associated with a variety of cellular activities
CO704_RS07005	SM00354	helix_turn _helix lactose operon repressor
CO704_RS07015	SM00382	ATPases associated with a variety of cellular activities
CO704_RS07085	SM00382	ATPases associated with a variety of cellular activities
CO704_RS07100	SM00354	helix_turn _helix lactose operon repressor
CO704_RS07120	SM00852	Probable molybdopterin binding domain
CO704_RS07125	SM00869	Autotransporter beta-domain
CO704_RS07135	SM00382	ATPases associated with a variety of cellular activities
CO704_RS07160	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS07180	SM00936	Penicillin-binding protein 5, C-terminal domain 
CO704_RS07185	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS07185	SM01134	CO704_RS07185
CO704_RS07190	SM00014	Acid phosphatase homologues
CO704_RS07250	SM00354	helix_turn _helix lactose operon repressor
CO704_RS07310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS07310	SM00866	CO704_RS07310
CO704_RS07335	SM01133	CO704_RS07335
CO704_RS07345	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CO704_RS07360	SM00448	cheY-homologous receiver domain
CO704_RS07360	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS07365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS07365	SM00387	Histidine kinase-like ATPases
CO704_RS07365	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS07395	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS07405	SM00478	endonuclease III
CO704_RS07405	SM01009	AlkA N-terminal domain
CO704_RS07410	SM00052	Putative diguanylate phosphodiesterase
CO704_RS07410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CO704_RS07410	SM00091	PAS domain
CO704_RS07410	SM00267	diguanylate cyclase
CO704_RS07430	SM01091	Transporter associated domain
CO704_RS07440	SM00226	Low molecular weight phosphatase family
CO704_RS07565	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO704_RS07645	SM01350	CO704_RS07645
CO704_RS07720	SM00479	CO704_RS07720
CO704_RS07730	SM00936	Penicillin-binding protein 5, C-terminal domain 
CO704_RS07735	SM00871	Bacterial transcription activator, effector binding domain
CO704_RS07755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO704_RS07760	SM00838	Elongation factor G C-terminus
CO704_RS07760	SM00889	Elongation factor G, domain IV
CO704_RS07770	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS07865	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS07875	SM01230	CO704_RS07875
CO704_RS07900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS07900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS07910	SM00829	Enoylreductase
CO704_RS07925	SM00421	helix_turn_helix, Lux Regulon
CO704_RS07975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS07975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS07980	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CO704_RS07995	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08015	SM00422	helix_turn_helix, mercury resistance
CO704_RS08035	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS08040	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS08095	SM00901	CO704_RS08095
CO704_RS08250	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS08255	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08275	SM00831	Cation transporter/ATPase, N-terminus
CO704_RS08305	SM00872	Alpha mannosidase, middle domain
CO704_RS08325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS08355	SM00267	diguanylate cyclase
CO704_RS08375	SM00421	helix_turn_helix, Lux Regulon
CO704_RS08425	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08470	SM00642	Alpha-amylase domain
CO704_RS08500	SM00028	Tetratricopeptide repeats
CO704_RS08530	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS08530	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS08545	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08555	SM00421	helix_turn_helix, Lux Regulon
CO704_RS08565	SM00421	helix_turn_helix, Lux Regulon
CO704_RS08565	SM00448	cheY-homologous receiver domain
CO704_RS08570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO704_RS08570	SM00465	GIY-YIG type nucleases (URI domain)
CO704_RS08645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS08665	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08670	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08710	SM00073	Histidine Phosphotransfer domain
CO704_RS08710	SM00260	Two component signalling adaptor domain
CO704_RS08710	SM00387	Histidine kinase-like ATPases
CO704_RS08710	SM01231	CO704_RS08710
CO704_RS08715	SM00260	Two component signalling adaptor domain
CO704_RS08725	SM00972	Spore Coat Protein U domain
CO704_RS08740	SM00972	Spore Coat Protein U domain
CO704_RS08745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS08745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS08745	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS08750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS08750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS08750	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS08755	SM00138	Methyltransferase, chemotaxis proteins 
CO704_RS08760	SM00448	cheY-homologous receiver domain
CO704_RS08765	SM00448	cheY-homologous receiver domain
CO704_RS08790	SM00836	DALR anticodon binding domain
CO704_RS08790	SM01016	Arginyl tRNA synthetase N terminal dom
CO704_RS08860	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO704_RS08865	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08875	SM00382	ATPases associated with a variety of cellular activities
CO704_RS08885	SM00257	Lysin motif
CO704_RS08970	SM00479	CO704_RS08970
CO704_RS09040	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS09045	SM00945	ProQ/FINO family
CO704_RS09050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO704_RS09050	SM00245	tail specific protease
CO704_RS09065	SM00346	helix_turn_helix isocitrate lyase regulation
CO704_RS09095	SM00357	Cold shock protein domain
CO704_RS09140	SM01091	Transporter associated domain
CO704_RS09145	SM00052	Putative diguanylate phosphodiesterase
CO704_RS09185	SM00487	DEAD-like helicases superfamily
CO704_RS09185	SM00491	CO704_RS09185
CO704_RS09205	SM00341	Helicase and RNase D C-terminal
CO704_RS09205	SM00474	3'-5' exonuclease
CO704_RS09265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS09280	SM01005	Alanine racemase, C-terminal domain
CO704_RS09285	SM01091	Transporter associated domain
CO704_RS09335	SM00220	Serine/Threonine protein kinases, catalytic domain
CO704_RS09350	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS09360	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS09375	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CO704_RS09380	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS09400	SM00382	ATPases associated with a variety of cellular activities
CO704_RS09445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS09445	SM00866	CO704_RS09445
CO704_RS09470	SM00947	Carbonic anhydrase
CO704_RS09510	SM00382	ATPases associated with a variety of cellular activities
CO704_RS09620	SM00422	helix_turn_helix, mercury resistance
CO704_RS09645	SM01400	CO704_RS09645
CO704_RS09670	SM00937	CO704_RS09670
CO704_RS09710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS09710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS09725	SM00421	helix_turn_helix, Lux Regulon
CO704_RS09725	SM00448	cheY-homologous receiver domain
CO704_RS09730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS09730	SM00387	Histidine kinase-like ATPases
CO704_RS09740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS09760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO704_RS09780	SM00382	ATPases associated with a variety of cellular activities
CO704_RS09825	SM00448	cheY-homologous receiver domain
CO704_RS09835	SM00984	UDP binding domain
CO704_RS09840	SM00528	Domain in histone-like proteins of HNS family
CO704_RS09875	SM00382	ATPases associated with a variety of cellular activities
CO704_RS09880	SM00382	ATPases associated with a variety of cellular activities
CO704_RS09895	SM00155	Phospholipase D. Active site motifs.
CO704_RS10185	SM00267	diguanylate cyclase
CO704_RS10190	SM00052	Putative diguanylate phosphodiesterase
CO704_RS10210	SM00912	haemagglutination activity domain
CO704_RS10270	SM00481	DNA polymerase alpha chain like domain
CO704_RS10280	SM00422	helix_turn_helix, mercury resistance
CO704_RS10285	SM00363	S4 RNA-binding domain
CO704_RS10295	SM01217	CO704_RS10295
CO704_RS10300	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS10310	SM00822	CO704_RS10310
CO704_RS10325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CO704_RS10325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CO704_RS10325	SM00493	CO704_RS10325
CO704_RS10350	SM00014	Acid phosphatase homologues
CO704_RS10360	SM00028	Tetratricopeptide repeats
CO704_RS10365	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CO704_RS10380	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS10380	SM01134	CO704_RS10380
CO704_RS10420	SM00052	Putative diguanylate phosphodiesterase
CO704_RS10420	SM00091	PAS domain
CO704_RS10420	SM00267	diguanylate cyclase
CO704_RS10425	SM00357	Cold shock protein domain
CO704_RS10425	SM00955	CO704_RS10425
CO704_RS10440	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10445	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10465	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10500	SM00091	PAS domain
CO704_RS10500	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10510	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CO704_RS10580	SM00953	CO704_RS10580
CO704_RS10600	SM00487	DEAD-like helicases superfamily
CO704_RS10600	SM00490	helicase superfamily c-terminal domain
CO704_RS10610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS10610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS10625	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10650	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS10665	SM00344	helix_turn_helix ASNC type
CO704_RS10700	SM00796	Allophanate hydrolase subunit 1
CO704_RS10700	SM00797	Allophanate hydrolase subunit 2
CO704_RS10700	SM00878	Biotin carboxylase C-terminal domain
CO704_RS10705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS10705	SM00895	CO704_RS10705
CO704_RS10730	SM00382	ATPases associated with a variety of cellular activities
CO704_RS10755	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS10760	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS10795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS10795	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS10805	SM00267	diguanylate cyclase
CO704_RS10810	SM00267	diguanylate cyclase
CO704_RS10815	SM00267	diguanylate cyclase
CO704_RS10875	SM00267	diguanylate cyclase
CO704_RS10890	SM00857	Resolvase, N terminal domain
CO704_RS10905	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS10905	SM01134	CO704_RS10905
CO704_RS10945	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CO704_RS10945	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CO704_RS11025	SM00091	PAS domain
CO704_RS11025	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11035	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS11120	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11120	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS11215	SM00448	cheY-homologous receiver domain
CO704_RS11215	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS11220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS11220	SM00387	Histidine kinase-like ATPases
CO704_RS11220	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS11225	SM00354	helix_turn _helix lactose operon repressor
CO704_RS11230	SM00640	Glycosyl hydrolases family 32
CO704_RS11250	SM00919	Malic enzyme, NAD binding domain
CO704_RS11250	SM01274	CO704_RS11250
CO704_RS11320	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS11340	SM00354	helix_turn _helix lactose operon repressor
CO704_RS11345	SM01038	Beta galactosidase small chain
CO704_RS11365	SM00346	helix_turn_helix isocitrate lyase regulation
CO704_RS11385	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS11395	SM00387	Histidine kinase-like ATPases
CO704_RS11395	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS11400	SM00448	cheY-homologous receiver domain
CO704_RS11400	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS11430	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CO704_RS11470	SM01022	CO704_RS11470
CO704_RS11495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS11495	SM00895	CO704_RS11495
CO704_RS11530	SM00450	Rhodanese Homology Domain
CO704_RS11545	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11570	SM00257	Lysin motif
CO704_RS11600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS11610	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11650	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11660	SM00354	helix_turn _helix lactose operon repressor
CO704_RS11715	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS11750	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11860	SM00382	ATPases associated with a variety of cellular activities
CO704_RS11880	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS11915	SM00890	Domain of unknown function
CO704_RS11920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CO704_RS11935	SM00450	Rhodanese Homology Domain
CO704_RS11940	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS11970	SM00487	DEAD-like helicases superfamily
CO704_RS11970	SM00490	helicase superfamily c-terminal domain
CO704_RS11990	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS12060	SM00829	Enoylreductase
CO704_RS12090	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS12125	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS12150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS12150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS12150	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS12495	SM00382	ATPases associated with a variety of cellular activities
CO704_RS12495	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS12535	SM00052	Putative diguanylate phosphodiesterase
CO704_RS12535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CO704_RS12535	SM00267	diguanylate cyclase
CO704_RS12560	SM00382	ATPases associated with a variety of cellular activities
CO704_RS12560	SM00487	DEAD-like helicases superfamily
CO704_RS12560	SM00490	helicase superfamily c-terminal domain
CO704_RS12560	SM00847	Helicase associated domain (HA2)  Add an annotation
CO704_RS12590	SM00448	cheY-homologous receiver domain
CO704_RS12590	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS12595	SM00387	Histidine kinase-like ATPases
CO704_RS12610	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS12635	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO704_RS12635	SM00382	ATPases associated with a variety of cellular activities
CO704_RS12690	SM00052	Putative diguanylate phosphodiesterase
CO704_RS12690	SM00267	diguanylate cyclase
CO704_RS12815	SM00849	Metallo-beta-lactamase superfamily
CO704_RS12825	SM01119	CO704_RS12825
CO704_RS12865	SM00421	helix_turn_helix, Lux Regulon
CO704_RS12905	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CO704_RS12910	SM00448	cheY-homologous receiver domain
CO704_RS12910	SM00850	LytTr DNA-binding domain
CO704_RS12915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS12915	SM00387	Histidine kinase-like ATPases
CO704_RS12920	SM00382	ATPases associated with a variety of cellular activities
CO704_RS12920	SM00930	CO704_RS12920
CO704_RS12960	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS12960	SM00387	Histidine kinase-like ATPases
CO704_RS12960	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS12960	SM00448	cheY-homologous receiver domain
CO704_RS12965	SM00421	helix_turn_helix, Lux Regulon
CO704_RS12965	SM00448	cheY-homologous receiver domain
CO704_RS12995	SM00421	helix_turn_helix, Lux Regulon
CO704_RS12995	SM00448	cheY-homologous receiver domain
CO704_RS13000	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS13000	SM00387	Histidine kinase-like ATPases
CO704_RS13000	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS13000	SM00448	cheY-homologous receiver domain
CO704_RS13010	SM00903	Flavin reductase like domain
CO704_RS13055	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS13065	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS13140	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS13160	SM01150	CO704_RS13160
CO704_RS13170	SM00463	Small MutS-related domain
CO704_RS13180	SM00100	Cyclic nucleotide-monophosphate binding domain
CO704_RS13180	SM00419	helix_turn_helix, cAMP Regulatory protein
CO704_RS13205	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CO704_RS13205	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CO704_RS13225	SM00448	cheY-homologous receiver domain
CO704_RS13225	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS13240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS13240	SM00387	Histidine kinase-like ATPases
CO704_RS13240	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS13285	SM00354	helix_turn _helix lactose operon repressor
CO704_RS13375	SM00900	CO704_RS13375
CO704_RS13385	SM00478	endonuclease III
CO704_RS13385	SM00525	CO704_RS13385
CO704_RS13405	SM00363	S4 RNA-binding domain
CO704_RS13430	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS13435	SM00382	ATPases associated with a variety of cellular activities
CO704_RS13450	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS13470	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS13520	SM00479	CO704_RS13520
CO704_RS13550	SM00354	helix_turn _helix lactose operon repressor
CO704_RS13630	SM00257	Lysin motif
CO704_RS13650	SM00382	ATPases associated with a variety of cellular activities
CO704_RS13755	SM00382	ATPases associated with a variety of cellular activities
CO704_RS13770	SM00354	helix_turn _helix lactose operon repressor
CO704_RS13780	SM00382	ATPases associated with a variety of cellular activities
CO704_RS13795	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS13800	SM00411	bacterial (prokaryotic) histone like domain
CO704_RS13805	SM00873	B3/4 domain
CO704_RS13805	SM00874	tRNA synthetase B5 domain
CO704_RS13805	SM00896	Ferredoxin-fold anticodon binding domain
CO704_RS13830	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CO704_RS13900	SM00465	GIY-YIG type nucleases (URI domain)
CO704_RS13975	SM00382	ATPases associated with a variety of cellular activities
CO704_RS13980	SM00450	Rhodanese Homology Domain
CO704_RS14005	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CO704_RS14005	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CO704_RS14005	SM00493	CO704_RS14005
CO704_RS14015	SM00014	Acid phosphatase homologues
CO704_RS14030	SM00870	CO704_RS14030
CO704_RS14040	SM00636	CO704_RS14040
CO704_RS14055	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CO704_RS14070	SM00763	PrkA AAA domain
CO704_RS14080	SM00422	helix_turn_helix, mercury resistance
CO704_RS14135	SM00382	ATPases associated with a variety of cellular activities
CO704_RS14140	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS14140	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS14145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS14150	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS14190	SM00849	Metallo-beta-lactamase superfamily
CO704_RS14255	SM01329	CO704_RS14255
CO704_RS14285	SM00448	cheY-homologous receiver domain
CO704_RS14285	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS14290	SM00387	Histidine kinase-like ATPases
CO704_RS14290	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS14295	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CO704_RS14300	SM00382	ATPases associated with a variety of cellular activities
CO704_RS14360	SM00382	ATPases associated with a variety of cellular activities
CO704_RS14395	SM00382	ATPases associated with a variety of cellular activities
CO704_RS14410	SM00487	DEAD-like helicases superfamily
CO704_RS14410	SM00490	helicase superfamily c-terminal domain
CO704_RS14410	SM00982	CO704_RS14410
CO704_RS14410	SM01058	CarD-like/TRCF domain
CO704_RS14415	SM00257	Lysin motif
CO704_RS14445	SM01006	Siderophore biosynthesis protein domain
CO704_RS14540	SM00825	Beta-ketoacyl synthase
CO704_RS14550	SM00822	CO704_RS14550
CO704_RS14555	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CO704_RS14585	SM00363	S4 RNA-binding domain
CO704_RS14595	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS14625	SM00047	Lysozyme subfamily 2
CO704_RS14670	SM00858	CO704_RS14670
CO704_RS14750	SM00867	YceI-like domain 
CO704_RS14755	SM00450	Rhodanese Homology Domain
CO704_RS14795	SM00506	Appr-1"-p processing enzyme
CO704_RS14840	SM00421	helix_turn_helix, Lux Regulon
CO704_RS14870	SM00481	DNA polymerase alpha chain like domain
CO704_RS14935	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS15040	SM00849	Metallo-beta-lactamase superfamily
CO704_RS15075	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15090	SM01007	Class II Aldolase and Adducin N-terminal domain
CO704_RS15120	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15140	SM00849	Metallo-beta-lactamase superfamily
CO704_RS15145	SM00387	Histidine kinase-like ATPases
CO704_RS15145	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS15150	SM00448	cheY-homologous receiver domain
CO704_RS15150	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS15160	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS15325	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CO704_RS15330	SM00992	Hemimethylated DNA-binding protein YccV like
CO704_RS15335	SM00881	CoA binding domain
CO704_RS15345	SM00851	MGS-like domain
CO704_RS15405	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15430	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15435	SM00981	CO704_RS15435
CO704_RS15460	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS15475	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15505	SM00849	Metallo-beta-lactamase superfamily
CO704_RS15570	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15575	SM00849	Metallo-beta-lactamase superfamily
CO704_RS15580	SM00411	bacterial (prokaryotic) histone like domain
CO704_RS15585	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS15640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS15650	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15660	SM00843	CO704_RS15660
CO704_RS15665	SM00344	helix_turn_helix ASNC type
CO704_RS15685	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15690	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15705	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS15710	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15710	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS15720	SM00357	Cold shock protein domain
CO704_RS15725	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15790	SM00644	CO704_RS15790
CO704_RS15805	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15810	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS15810	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS15825	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS15825	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS15830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS15830	SM00866	CO704_RS15830
CO704_RS15865	SM00382	ATPases associated with a variety of cellular activities
CO704_RS15945	SM00529	Helix-turn-helix diphteria tox regulatory element
CO704_RS15975	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS15975	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS15985	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16000	SM00903	Flavin reductase like domain
CO704_RS16040	SM00487	DEAD-like helicases superfamily
CO704_RS16040	SM00488	CO704_RS16040
CO704_RS16040	SM00491	CO704_RS16040
CO704_RS16065	SM00421	helix_turn_helix, Lux Regulon
CO704_RS16065	SM00448	cheY-homologous receiver domain
CO704_RS16070	SM00091	PAS domain
CO704_RS16070	SM00387	Histidine kinase-like ATPases
CO704_RS16095	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16180	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16215	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CO704_RS16220	SM00422	helix_turn_helix, mercury resistance
CO704_RS16230	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16245	SM01230	CO704_RS16245
CO704_RS16260	SM00867	YceI-like domain 
CO704_RS16285	SM01217	CO704_RS16285
CO704_RS16335	SM00849	Metallo-beta-lactamase superfamily
CO704_RS16355	SM01061	CAT RNA binding domain
CO704_RS16375	SM00487	DEAD-like helicases superfamily
CO704_RS16375	SM00490	helicase superfamily c-terminal domain
CO704_RS16390	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16430	SM00852	Probable molybdopterin binding domain
CO704_RS16435	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS16445	SM00487	DEAD-like helicases superfamily
CO704_RS16445	SM00490	helicase superfamily c-terminal domain
CO704_RS16450	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS16480	SM00876	Biotin and Thiamin Synthesis associated domain
CO704_RS16510	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16535	SM00382	ATPases associated with a variety of cellular activities
CO704_RS16560	SM00855	Phosphoglycerate mutase family
CO704_RS16660	SM00881	CoA binding domain
CO704_RS16675	SM00861	Transketolase, pyrimidine binding domain
CO704_RS16710	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CO704_RS16710	SM01232	CO704_RS16710
CO704_RS16715	SM00797	Allophanate hydrolase subunit 2
CO704_RS16720	SM00796	Allophanate hydrolase subunit 1
CO704_RS16760	SM00387	Histidine kinase-like ATPases
CO704_RS16760	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS16765	SM00448	cheY-homologous receiver domain
CO704_RS16765	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS17160	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS17175	SM00116	Domain in cystathionine beta-synthase and other proteins.
CO704_RS17175	SM01091	Transporter associated domain
CO704_RS17185	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS17200	SM00382	ATPases associated with a variety of cellular activities
CO704_RS17260	SM00936	Penicillin-binding protein 5, C-terminal domain 
CO704_RS17280	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS17300	SM00357	Cold shock protein domain
CO704_RS17410	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS17490	SM00858	CO704_RS17490
CO704_RS17520	SM00382	ATPases associated with a variety of cellular activities
CO704_RS17545	SM00382	ATPases associated with a variety of cellular activities
CO704_RS17590	SM00354	helix_turn _helix lactose operon repressor
CO704_RS17675	SM00487	DEAD-like helicases superfamily
CO704_RS17675	SM00490	helicase superfamily c-terminal domain
CO704_RS17770	SM00382	ATPases associated with a variety of cellular activities
CO704_RS17770	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS17835	SM00248	ankyrin repeats
CO704_RS17870	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS17925	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS17980	SM00822	CO704_RS17980
CO704_RS17990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS17990	SM00895	CO704_RS17990
CO704_RS18030	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CO704_RS18045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS18060	SM00344	helix_turn_helix ASNC type
CO704_RS18110	SM00938	Nitrogen regulatory protein P-II
CO704_RS18115	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18120	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18125	SM00344	helix_turn_helix ASNC type
CO704_RS18155	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CO704_RS18165	SM00411	bacterial (prokaryotic) histone like domain
CO704_RS18170	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18170	SM00464	Found in ATP-dependent protease La (LON)
CO704_RS18175	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18175	SM00994	ClpX C4-type zinc finger
CO704_RS18175	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS18205	SM00900	CO704_RS18205
CO704_RS18270	SM00981	CO704_RS18270
CO704_RS18285	SM00861	Transketolase, pyrimidine binding domain
CO704_RS18350	SM01323	CO704_RS18350
CO704_RS18395	SM00642	Alpha-amylase domain
CO704_RS18410	SM00091	PAS domain
CO704_RS18410	SM00387	Histidine kinase-like ATPases
CO704_RS18410	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS18415	SM00448	cheY-homologous receiver domain
CO704_RS18415	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS18485	SM00098	Alkaline phosphatase homologues
CO704_RS18530	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS18565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS18565	SM00267	diguanylate cyclase
CO704_RS18575	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CO704_RS18575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS18600	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18605	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18610	SM00382	ATPases associated with a variety of cellular activities
CO704_RS18630	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS18635	SM00387	Histidine kinase-like ATPases
CO704_RS18640	SM00448	cheY-homologous receiver domain
CO704_RS18650	SM00900	CO704_RS18650
CO704_RS18665	SM00387	Histidine kinase-like ATPases
CO704_RS18665	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS18670	SM00421	helix_turn_helix, Lux Regulon
CO704_RS18670	SM00448	cheY-homologous receiver domain
CO704_RS18725	SM00052	Putative diguanylate phosphodiesterase
CO704_RS18765	SM00052	Putative diguanylate phosphodiesterase
CO704_RS18775	SM00248	ankyrin repeats
CO704_RS18780	SM00822	CO704_RS18780
CO704_RS18845	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS18945	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CO704_RS19050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS19050	SM00895	CO704_RS19050
CO704_RS19070	SM00479	CO704_RS19070
CO704_RS19085	SM00849	Metallo-beta-lactamase superfamily
CO704_RS19090	SM00257	Lysin motif
CO704_RS19150	SM00382	ATPases associated with a variety of cellular activities
CO704_RS19150	SM00930	CO704_RS19150
CO704_RS19195	SM01322	CO704_RS19195
CO704_RS19215	SM00977	TilS substrate C-terminal domain
CO704_RS19235	SM00481	DNA polymerase alpha chain like domain
CO704_RS19265	SM00935	Outer membrane protein (OmpH-like)
CO704_RS19275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO704_RS19320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS19335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CO704_RS19340	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS19385	SM00382	ATPases associated with a variety of cellular activities
CO704_RS19400	SM00487	DEAD-like helicases superfamily
CO704_RS19400	SM00490	helicase superfamily c-terminal domain
CO704_RS19400	SM00847	Helicase associated domain (HA2)  Add an annotation
CO704_RS19470	SM00382	ATPases associated with a variety of cellular activities
CO704_RS19475	SM00947	Carbonic anhydrase
CO704_RS19485	SM00564	beta-propeller repeat
CO704_RS19530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS19530	SM00895	CO704_RS19530
CO704_RS19545	SM00644	CO704_RS19545
CO704_RS19570	SM01240	CO704_RS19570
CO704_RS19595	SM00957	SecA DEAD-like domain
CO704_RS19595	SM00958	SecA preprotein cross-linking domain
CO704_RS19615	SM00864	Tubulin/FtsZ family, GTPase domain
CO704_RS19615	SM00865	Tubulin/FtsZ family, C-terminal domain
CO704_RS19620	SM00842	Cell division protein FtsA
CO704_RS19690	SM00354	helix_turn _helix lactose operon repressor
CO704_RS19710	SM00917	LeuA allosteric (dimerisation) domain
CO704_RS19715	SM01329	CO704_RS19715
CO704_RS19755	SM00382	ATPases associated with a variety of cellular activities
CO704_RS19765	SM00486	DNA polymerase type-B family
CO704_RS19770	SM00487	DEAD-like helicases superfamily
CO704_RS19770	SM00490	helicase superfamily c-terminal domain
CO704_RS19780	SM00271	DnaJ molecular chaperone homology domain
CO704_RS19800	SM00650	Ribosomal RNA adenine dimethylases
CO704_RS19835	SM00851	MGS-like domain
CO704_RS19835	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CO704_RS19840	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CO704_RS19885	SM00904	Riboflavin kinase
CO704_RS19910	SM00271	DnaJ molecular chaperone homology domain
CO704_RS19930	SM00852	Probable molybdopterin binding domain
CO704_RS19985	SM00448	cheY-homologous receiver domain
CO704_RS19985	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS19990	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CO704_RS19995	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20030	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS20030	SM00871	Bacterial transcription activator, effector binding domain
CO704_RS20035	SM00855	Phosphoglycerate mutase family
CO704_RS20055	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20060	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS20065	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20100	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CO704_RS20110	SM01133	CO704_RS20110
CO704_RS20135	SM00749	bacterial OsmY and nodulation domain
CO704_RS20185	SM00267	diguanylate cyclase
CO704_RS20210	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS20230	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS20275	SM01118	CO704_RS20275
CO704_RS20280	SM00287	Bacterial SH3 domain homologues
CO704_RS20285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS20295	SM00905	Dihydroneopterin aldolase
CO704_RS20300	SM01207	CO704_RS20300
CO704_RS20325	SM00400	zinc finger
CO704_RS20325	SM00493	CO704_RS20325
CO704_RS20325	SM00766	DNA primase DnaG DnaB-binding
CO704_RS20365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS20390	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS20425	SM00866	CO704_RS20425
CO704_RS20450	SM00996	S-adenosyl-L-homocysteine hydrolase
CO704_RS20450	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CO704_RS20460	SM00028	Tetratricopeptide repeats
CO704_RS20475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS20475	SM00895	CO704_RS20475
CO704_RS20485	SM00357	Cold shock protein domain
CO704_RS20490	SM00829	Enoylreductase
CO704_RS20520	SM00764	Citrate lyase ligase C-terminal domain
CO704_RS20535	SM00091	PAS domain
CO704_RS20535	SM00387	Histidine kinase-like ATPases
CO704_RS20540	SM00448	cheY-homologous receiver domain
CO704_RS20545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CO704_RS20545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS20570	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20575	SM00382	ATPases associated with a variety of cellular activities
CO704_RS20580	SM00267	diguanylate cyclase
CO704_RS20595	SM01133	CO704_RS20595
CO704_RS20610	SM00448	cheY-homologous receiver domain
CO704_RS20610	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS20615	SM00387	Histidine kinase-like ATPases
CO704_RS20615	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS20655	SM00858	CO704_RS20655
CO704_RS20670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS20670	SM00895	CO704_RS20670
CO704_RS20735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS20735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS20775	SM01091	Transporter associated domain
CO704_RS20810	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS20820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS20820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS20820	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS20870	SM01007	Class II Aldolase and Adducin N-terminal domain
CO704_RS20880	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CO704_RS20905	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS20905	SM01134	CO704_RS20905
CO704_RS20930	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CO704_RS20935	SM00316	Ribosomal protein S1-like RNA-binding domain
CO704_RS20935	SM00357	Cold shock protein domain
CO704_RS20935	SM00955	CO704_RS20935
CO704_RS20945	SM00788	Adenylosuccinate synthetase
CO704_RS20955	SM00244	prohibitin homologues
CO704_RS20960	SM00244	prohibitin homologues
CO704_RS20980	SM00853	MutL C terminal dimerisation domain
CO704_RS20980	SM01340	CO704_RS20980
CO704_RS20985	SM00646	CO704_RS20985
CO704_RS21020	SM00479	CO704_RS21020
CO704_RS21055	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS21080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CO704_RS21090	SM00420	helix_turn_helix, Deoxyribose operon repressor
CO704_RS21090	SM01134	CO704_RS21090
CO704_RS21170	SM00749	bacterial OsmY and nodulation domain
CO704_RS21230	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS21240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CO704_RS21360	SM00421	helix_turn_helix, Lux Regulon
CO704_RS21375	SM00841	Elongation factor P, C-terminal
CO704_RS21375	SM01185	CO704_RS21375
CO704_RS21395	SM00883	Chaperonin 10 Kd subunit
CO704_RS21460	SM00421	helix_turn_helix, Lux Regulon
CO704_RS21550	SM00634	Bacterial Ig-like domain (group 1)
CO704_RS21600	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS21655	SM00470	ParB-like nuclease domain
CO704_RS21730	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS21750	SM00052	Putative diguanylate phosphodiesterase
CO704_RS21765	SM00382	ATPases associated with a variety of cellular activities
CO704_RS21795	SM01120	CO704_RS21795
CO704_RS21830	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22085	SM00671	Sel1-like repeats.
CO704_RS22120	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22120	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS22180	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22215	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS22245	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22275	SM01119	CO704_RS22275
CO704_RS22330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS22330	SM00866	CO704_RS22330
CO704_RS22355	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22360	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22370	SM00072	Guanylate kinase homologues.
CO704_RS22405	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS22425	SM00387	Histidine kinase-like ATPases
CO704_RS22425	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS22425	SM00448	cheY-homologous receiver domain
CO704_RS22430	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22450	SM00448	cheY-homologous receiver domain
CO704_RS22450	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS22510	SM00422	helix_turn_helix, mercury resistance
CO704_RS22515	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS22525	SM00052	Putative diguanylate phosphodiesterase
CO704_RS22610	SM01005	Alanine racemase, C-terminal domain
CO704_RS22615	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22620	SM00829	Enoylreductase
CO704_RS22665	SM00563	Phosphate acyltransferases
CO704_RS22690	SM00382	ATPases associated with a variety of cellular activities
CO704_RS22765	SM00363	S4 RNA-binding domain
CO704_RS22785	SM01018	B12 binding domain
CO704_RS22790	SM00346	helix_turn_helix isocitrate lyase regulation
CO704_RS22840	SM00798	AICARFT/IMPCHase bienzyme
CO704_RS22840	SM00851	MGS-like domain
CO704_RS22845	SM01209	CO704_RS22845
CO704_RS22845	SM01210	CO704_RS22845
CO704_RS22855	SM00411	bacterial (prokaryotic) histone like domain
CO704_RS22910	SM00876	Biotin and Thiamin Synthesis associated domain
CO704_RS22930	SM00663	RNA polymerase I subunit A N-terminus
CO704_RS22960	SM00649	Ribosomal protein L11/L12
CO704_RS22965	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CO704_RS22965	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CO704_RS23085	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CO704_RS23090	SM01004	Delta-aminolevulinic acid dehydratase
CO704_RS23180	SM00341	Helicase and RNase D C-terminal
CO704_RS23180	SM00487	DEAD-like helicases superfamily
CO704_RS23180	SM00490	helicase superfamily c-terminal domain
CO704_RS23180	SM00956	CO704_RS23180
CO704_RS23235	SM01219	CO704_RS23235
CO704_RS23335	SM00984	UDP binding domain
CO704_RS23355	SM00357	Cold shock protein domain
CO704_RS23355	SM00382	ATPases associated with a variety of cellular activities
CO704_RS23355	SM00959	Rho termination factor, N-terminal domain
CO704_RS23365	SM00487	DEAD-like helicases superfamily
CO704_RS23365	SM00490	helicase superfamily c-terminal domain
CO704_RS23435	SM00382	ATPases associated with a variety of cellular activities
CO704_RS23530	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CO704_RS23575	SM00487	DEAD-like helicases superfamily
CO704_RS23575	SM00490	helicase superfamily c-terminal domain
CO704_RS23580	SM00354	helix_turn _helix lactose operon repressor
CO704_RS23600	SM00382	ATPases associated with a variety of cellular activities
CO704_RS23600	SM01086	C-terminal, D2-small domain, of ClpB protein
CO704_RS23680	SM00448	cheY-homologous receiver domain
CO704_RS23680	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS23685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS23685	SM00387	Histidine kinase-like ATPases
CO704_RS23685	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS23695	SM00971	Serine acetyltransferase, N-terminal
CO704_RS23715	SM00450	Rhodanese Homology Domain
CO704_RS23735	SM00829	Enoylreductase
CO704_RS23800	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CO704_RS23800	SM01232	CO704_RS23800
CO704_RS23860	SM00532	Ligase N family
CO704_RS23865	SM00072	Guanylate kinase homologues.
CO704_RS23870	SM01409	CO704_RS23870
CO704_RS23875	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CO704_RS23875	SM00954	Region found in RelA / SpoT proteins
CO704_RS23885	SM00487	DEAD-like helicases superfamily
CO704_RS23885	SM00490	helicase superfamily c-terminal domain
CO704_RS23935	SM01230	CO704_RS23935
CO704_RS23940	SM00091	PAS domain
CO704_RS23940	SM00387	Histidine kinase-like ATPases
CO704_RS23940	SM00388	His Kinase A (phosphoacceptor) domain
CO704_RS23945	SM00382	ATPases associated with a variety of cellular activities
CO704_RS23945	SM00448	cheY-homologous receiver domain
CO704_RS23950	SM00729	Elongator protein 3, MiaB family, Radical SAM
CO704_RS23965	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CO704_RS23965	SM00474	3'-5' exonuclease
CO704_RS23965	SM00475	5'-3' exonuclease
CO704_RS23965	SM00482	DNA polymerase A domain
CO704_RS23970	SM00563	Phosphate acyltransferases
CO704_RS24020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS24020	SM00895	CO704_RS24020
CO704_RS24030	SM00354	helix_turn _helix lactose operon repressor
CO704_RS24050	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24065	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24070	SM00327	von Willebrand factor (vWF) type A domain
CO704_RS24080	SM00344	helix_turn_helix ASNC type
CO704_RS24090	SM01228	CO704_RS24090
CO704_RS24135	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24170	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24200	SM00260	Two component signalling adaptor domain
CO704_RS24200	SM00448	cheY-homologous receiver domain
CO704_RS24205	SM00507	HNH nucleases
CO704_RS24210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CO704_RS24210	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CO704_RS24310	SM00642	Alpha-amylase domain
CO704_RS24320	SM00047	Lysozyme subfamily 2
CO704_RS24325	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS24335	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24360	SM00342	helix_turn_helix, arabinose operon control protein
CO704_RS24385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CO704_RS24385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CO704_RS24385	SM00319	Homologues of the ligand binding domain of Tar
CO704_RS24390	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS24430	SM00354	helix_turn _helix lactose operon repressor
CO704_RS24445	SM00028	Tetratricopeptide repeats
CO704_RS24490	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24495	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24590	SM00028	Tetratricopeptide repeats
CO704_RS24595	SM00052	Putative diguanylate phosphodiesterase
CO704_RS24595	SM00267	diguanylate cyclase
CO704_RS24615	SM00052	Putative diguanylate phosphodiesterase
CO704_RS24680	SM01234	CO704_RS24680
CO704_RS24695	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24695	SM00760	Bacterial dnaA protein helix-turn-helix domain
CO704_RS24700	SM00480	DNA polymerase III beta subunit
CO704_RS24710	SM00387	Histidine kinase-like ATPases
CO704_RS24710	SM00433	TopoisomeraseII
CO704_RS24725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS24725	SM00895	CO704_RS24725
CO704_RS24740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CO704_RS24785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS24785	SM00866	CO704_RS24785
CO704_RS24805	SM00062	Bacterial periplasmic substrate-binding proteins
CO704_RS24805	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CO704_RS24815	SM00382	ATPases associated with a variety of cellular activities
CO704_RS24825	SM00354	helix_turn _helix lactose operon repressor
CO704_RS24930	SM00060	Fibronectin type 3 domain
CO704_RS24945	SM00230	Calpain-like thiol protease family.
CO704_RS24950	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS24955	SM00421	helix_turn_helix, Lux Regulon
CO704_RS25015	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25155	SM00857	Resolvase, N terminal domain
CO704_RS25210	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25275	SM00382	ATPases associated with a variety of cellular activities
CO704_RS25290	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25335	SM00869	Autotransporter beta-domain
CO704_RS25520	SM00421	helix_turn_helix, Lux Regulon
CO704_RS25530	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25535	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25570	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS25580	SM00421	helix_turn_helix, Lux Regulon
CO704_RS25590	SM00528	Domain in histone-like proteins of HNS family
CO704_RS25620	SM00563	Phosphate acyltransferases
CO704_RS25675	SM00825	Beta-ketoacyl synthase
CO704_RS25685	SM00822	CO704_RS25685
CO704_RS25690	SM00825	Beta-ketoacyl synthase
CO704_RS25730	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25735	SM00822	CO704_RS25735
CO704_RS25750	SM00421	helix_turn_helix, Lux Regulon
CO704_RS25770	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25780	SM00822	CO704_RS25780
CO704_RS25795	SM01120	CO704_RS25795
CO704_RS25825	SM00421	helix_turn_helix, Lux Regulon
CO704_RS25845	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25855	SM00822	CO704_RS25855
CO704_RS25905	SM00530	Helix-turn-helix XRE-family like proteins 
CO704_RS25935	SM00470	ParB-like nuclease domain
CO704_RS25970	SM00862	Transcriptional regulatory protein, C terminal
CO704_RS25980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CO704_RS25980	SM00895	CO704_RS25980
CO704_RS26005	SM00822	CO704_RS26005
