CO704_RS14420 d56adac5069cdeffa9bb1833419d45a9 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.6E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS14420 d56adac5069cdeffa9bb1833419d45a9 85 Gene3D G3DSA:3.30.1660.10 21 85 6.0E-21 T 28-03-2018 IPR025543 Dodecin-like CO704_RS14420 d56adac5069cdeffa9bb1833419d45a9 85 SUPERFAMILY SSF159871 3 85 2.09E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS22025 64cd6493c63c3d885a3b3600a1c5830c 459 Pfam PF12486 Type VI secretion system, EvfB, or VasL 310 454 1.1E-51 T 28-03-2018 IPR021069 ImpA, C-terminal CO704_RS22025 64cd6493c63c3d885a3b3600a1c5830c 459 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 110 3.6E-20 T 28-03-2018 IPR010657 ImpA, N-terminal CO704_RS03365 0096736e928f210cdb3157d747240301 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS03365 0096736e928f210cdb3157d747240301 155 Gene3D G3DSA:3.30.700.10 8 141 1.3E-6 T 28-03-2018 CO704_RS03365 0096736e928f210cdb3157d747240301 155 SUPERFAMILY SSF54523 8 150 3.3E-11 T 28-03-2018 CO704_RS03365 0096736e928f210cdb3157d747240301 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.9E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS06370 4bc7a3c1be1fdb1bfed1e928c5785215 161 Pfam PF02674 Colicin V production protein 4 141 1.4E-36 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CO704_RS03285 8d7fad92dca8b3b2fbad05086d7453d9 388 SUPERFAMILY SSF103473 4 374 1.57E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03285 8d7fad92dca8b3b2fbad05086d7453d9 388 Pfam PF07690 Major Facilitator Superfamily 8 314 5.3E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03285 8d7fad92dca8b3b2fbad05086d7453d9 388 Gene3D G3DSA:1.20.1250.20 190 376 4.1E-16 T 28-03-2018 CO704_RS03285 8d7fad92dca8b3b2fbad05086d7453d9 388 Gene3D G3DSA:1.20.1250.20 3 189 5.5E-29 T 28-03-2018 CO704_RS16360 ae77937484de0fd1a8d41aaaf9a27f9a 296 Pfam PF01975 Survival protein SurE 27 223 4.4E-44 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS16360 ae77937484de0fd1a8d41aaaf9a27f9a 296 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 25 226 3.1E-42 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS16360 ae77937484de0fd1a8d41aaaf9a27f9a 296 SUPERFAMILY SSF64167 25 289 1.96E-47 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS16360 ae77937484de0fd1a8d41aaaf9a27f9a 296 Gene3D G3DSA:3.40.1210.10 24 292 1.8E-57 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 206 2.6E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Gene3D G3DSA:3.90.226.10 13 266 3.3E-54 T 28-03-2018 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 SUPERFAMILY SSF52096 2 303 6.9E-70 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Gene3D G3DSA:3.40.50.720 267 495 1.1E-60 T 28-03-2018 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 SUPERFAMILY SSF48179 622 714 1.7E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Gene3D G3DSA:1.10.1040.10 622 713 1.8E-15 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 SUPERFAMILY SSF48179 495 611 2.64E-29 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 SUPERFAMILY SSF51735 314 495 1.74E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.533 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Gene3D G3DSA:1.10.1040.10 503 592 5.9E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 681 1.3E-5 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 591 1.3E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS23065 dcc9d4e3aa5ecbdeb2667f29e0e2cc48 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 4.2E-61 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 3.4E-125 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Pfam PF00809 Pterin binding enzyme 360 598 3.8E-61 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:1.10.1240.10 652 731 1.4E-37 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Pfam PF02607 B12 binding domain 659 733 3.6E-25 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SMART SM01018 657 740 1.7E-44 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SUPERFAMILY SSF82282 7 399 8.76E-117 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Pfam PF02310 B12 binding domain 748 840 1.8E-17 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SUPERFAMILY SSF51717 356 630 6.15E-88 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:3.10.196.10 956 1078 4.9E-44 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:3.10.196.10 1079 1227 1.2E-64 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SUPERFAMILY SSF47644 653 739 5.75E-29 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SUPERFAMILY SSF56507 903 1226 9.29E-133 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 1.1E-78 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 SUPERFAMILY SSF52242 742 894 3.4E-47 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:3.20.20.20 345 644 4.7E-74 T 28-03-2018 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:3.20.20.330 2 337 9.0E-112 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 Gene3D G3DSA:3.40.50.280 732 903 5.8E-57 T 28-03-2018 CO704_RS22785 6f4409a599cbd6ce3816bcc3cdadfb85 1227 PIRSF PIRSF000381 1 1195 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 Pfam PF00005 ABC transporter 26 184 3.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 3.7E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 Gene3D G3DSA:3.40.50.300 2 325 3.2E-76 T 28-03-2018 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 SUPERFAMILY SSF52540 5 255 4.65E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 8.7E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS18600 2e8a031efda45a046a6e5e3e6eaa9408 326 SMART SM00382 34 234 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15345 007063de9d3ac859812940a628853664 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 38.765 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CO704_RS15345 007063de9d3ac859812940a628853664 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CO704_RS15345 007063de9d3ac859812940a628853664 152 Gene3D G3DSA:3.40.50.1380 1 152 7.8E-45 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS15345 007063de9d3ac859812940a628853664 152 Pfam PF02142 MGS-like domain 26 118 4.7E-20 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS15345 007063de9d3ac859812940a628853664 152 SUPERFAMILY SSF52335 6 151 3.57E-60 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS15345 007063de9d3ac859812940a628853664 152 SMART SM00851 25 118 1.8E-28 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS15345 007063de9d3ac859812940a628853664 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 2.2E-72 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CO704_RS15345 007063de9d3ac859812940a628853664 152 PIRSF PIRSF006614 8 151 5.4E-66 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 SUPERFAMILY SSF51395 1 335 5.5E-107 T 28-03-2018 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 PIRSF PIRSF000164 12 336 5.5E-98 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 6.6E-94 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 6.9E-163 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.324 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CO704_RS15450 6a01035d0f53c862942a03ac62e0bf4c 336 Gene3D G3DSA:3.20.20.70 1 336 2.8E-79 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 3.1E-35 T 28-03-2018 CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CO704_RS15705 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS04950 e3c950f54ba68404791ea2fa7bc1bfeb 258 Pfam PF14581 SseB protein C-terminal domain 137 243 1.4E-31 T 28-03-2018 IPR027945 SseB protein, C-terminal CO704_RS04950 e3c950f54ba68404791ea2fa7bc1bfeb 258 Pfam PF07179 SseB protein N-terminal domain 8 120 8.0E-28 T 28-03-2018 IPR009839 SseB protein N-terminal domain CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 551 56.152 T 28-03-2018 IPR023018 Transport protein YidE, putative CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 SUPERFAMILY SSF116726 203 271 2.22E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Gene3D G3DSA:3.30.70.1450 190 279 1.8E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Gene3D G3DSA:3.30.70.1450 280 366 2.9E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.7E-45 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 3.9E-43 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 SUPERFAMILY SSF116726 285 360 1.96E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 Pfam PF02080 TrkA-C domain 291 359 2.4E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 4.5E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS24780 6b03a4134877b526012e835f4db008d5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.5E-48 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 Pfam PF04055 Radical SAM superfamily 57 226 7.1E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 PIRSF PIRSF000167 2 454 1.2E-175 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 Pfam PF06969 HemN C-terminal domain 363 431 2.6E-9 T 28-03-2018 IPR010723 HemN, C-terminal CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 9.8E-229 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 SMART SM00729 52 272 9.1E-55 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 SUPERFAMILY SSF102114 6 444 9.03E-146 T 28-03-2018 CO704_RS23950 2913b4b663041a78b834a5fa44a951a5 457 Gene3D G3DSA:3.20.20.70 40 353 1.3E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 Gene3D G3DSA:3.30.465.10 107 224 3.3E-28 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 478 4.7E-19 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 SUPERFAMILY SSF56176 5 225 2.15E-45 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 Pfam PF01565 FAD binding domain 51 190 2.1E-32 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 Gene3D G3DSA:3.30.43.10 2 106 7.2E-17 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 Gene3D G3DSA:1.10.45.10 441 479 3.0E-6 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CO704_RS03605 3f2d95778a26f77ff71486ce0d6afc16 484 SUPERFAMILY SSF55103 204 481 1.8E-25 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CO704_RS07655 871e463f22ef2f0f4ff928d4e390785c 286 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 1.5E-151 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CO704_RS07655 871e463f22ef2f0f4ff928d4e390785c 286 Pfam PF00483 Nucleotidyl transferase 2 238 7.6E-66 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS07655 871e463f22ef2f0f4ff928d4e390785c 286 SUPERFAMILY SSF53448 1 285 3.15E-86 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07655 871e463f22ef2f0f4ff928d4e390785c 286 Gene3D G3DSA:3.90.550.10 1 286 3.3E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS12340 96001c2aa6a86c9ce6d390de0aad232b 525 Pfam PF06074 Protein of unknown function (DUF935) 34 521 4.3E-155 T 28-03-2018 IPR009279 Protein of unknown function DUF935 CO704_RS10065 96001c2aa6a86c9ce6d390de0aad232b 525 Pfam PF06074 Protein of unknown function (DUF935) 34 521 4.3E-155 T 28-03-2018 IPR009279 Protein of unknown function DUF935 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 SMART SM00829 10 367 0.0054 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 SUPERFAMILY SSF51735 160 334 1.28E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 Gene3D G3DSA:3.90.180.10 1 188 8.1E-61 T 28-03-2018 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 SUPERFAMILY SSF50129 1 186 4.11E-73 T 28-03-2018 IPR011032 GroES-like CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 4.5E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 9.1E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 6.5E-225 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 Gene3D G3DSA:3.40.50.720 189 312 1.4E-26 T 28-03-2018 CO704_RS12060 89e2acb0dede17a7e71e96ed1d369ad3 372 SUPERFAMILY SSF50129 318 369 8.47E-13 T 28-03-2018 IPR011032 GroES-like CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.71 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PIRSF PIRSF006160 1 162 1.2E-65 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 7.0E-77 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 Gene3D G3DSA:3.30.1360.80 3 161 1.5E-63 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.9E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 2.4E-61 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS03905 0653b608c517cab51368896c2c1116f5 171 SUPERFAMILY SSF63411 4 162 2.93E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS03805 549a27047506429ddd43981917bb2c21 259 SUPERFAMILY SSF51735 2 258 2.46E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03805 549a27047506429ddd43981917bb2c21 259 Gene3D G3DSA:3.40.50.720 1 259 7.8E-54 T 28-03-2018 CO704_RS03805 549a27047506429ddd43981917bb2c21 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.2E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 Pfam PF00106 short chain dehydrogenase 3 197 3.3E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03805 549a27047506429ddd43981917bb2c21 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 270 1.3E-63 T 28-03-2018 IPR000150 Cof family GO:0016787 CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 225 247 - T 28-03-2018 CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 Gene3D G3DSA:3.40.50.1000 1 276 5.7E-40 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 SUPERFAMILY SSF56784 1 275 1.2E-62 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 244 2.2E-24 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 271 5.8E-63 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16505 95ca895bbf1f765ebdc58b8d6b4c7a1d 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 6.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 487 2.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 SMART SM00388 267 335 3.7E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 SUPERFAMILY SSF47384 254 335 2.16E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Gene3D G3DSA:1.10.287.130 273 331 3.6E-14 T 28-03-2018 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 SUPERFAMILY SSF55874 325 488 1.57E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Gene3D G3DSA:3.30.450.20 34 166 1.6E-9 T 28-03-2018 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Gene3D G3DSA:3.30.565.10 341 488 1.6E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 2.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 2.9E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 SMART SM00387 381 488 1.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03050 47687e0f0078a81109e4ba7d797970f3 488 Gene3D G3DSA:3.30.450.20 205 272 5.9E-4 T 28-03-2018 CO704_RS23565 f5b7ede1babe9c7c0400515146554e5a 105 Gene3D G3DSA:1.10.140.10 3 103 1.0E-58 T 28-03-2018 IPR023453 Methionine repressor MetJ domain CO704_RS23565 f5b7ede1babe9c7c0400515146554e5a 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.777 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CO704_RS23565 f5b7ede1babe9c7c0400515146554e5a 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.9E-58 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CO704_RS23565 f5b7ede1babe9c7c0400515146554e5a 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-47 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CO704_RS23565 f5b7ede1babe9c7c0400515146554e5a 105 SUPERFAMILY SSF47598 2 105 3.33E-57 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 SUPERFAMILY SSF56037 319 430 3.92E-28 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 Pfam PF11734 TilS substrate C-terminal domain 358 429 5.0E-26 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 SMART SM00977 358 429 1.1E-22 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 302 23.018 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 359 403 1.1E-13 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 Pfam PF09179 TilS substrate binding domain 243 310 2.5E-19 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 SUPERFAMILY SSF52402 6 228 8.16E-59 T 28-03-2018 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 198 3.1E-48 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 SUPERFAMILY SSF82829 229 313 3.27E-26 T 28-03-2018 CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 Gene3D G3DSA:3.40.50.620 8 222 7.4E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19215 f415137951ddd3775c54dc2d323aea6b 435 Pfam PF01171 PP-loop family 16 193 7.7E-53 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 SUPERFAMILY SSF53067 6 189 1.13E-61 T 28-03-2018 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 155.19 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PIRSF PIRSF000722 4 397 1.2E-129 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 SUPERFAMILY SSF53067 153 392 7.4E-82 T 28-03-2018 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 TIGRFAM TIGR00016 ackA: acetate kinase 5 392 2.4E-148 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 199 220 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 374 386 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 296 309 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 7 18 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 169 182 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 PRINTS PR00471 Acetate kinase family signature 318 334 1.3E-44 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 Gene3D G3DSA:3.30.420.40 6 191 6.7E-61 T 28-03-2018 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 Gene3D G3DSA:3.30.420.40 195 401 4.7E-73 T 28-03-2018 CO704_RS02935 4991b960a6363302ba067fa40248dd31 402 Pfam PF00871 Acetokinase family 7 386 1.1E-147 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:2.20.25.90 1 55 5.2E-15 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:3.40.50.740 61 167 9.1E-26 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 SMART SM00926 1 54 1.4E-13 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 PIRSF PIRSF000144 534 693 0.16 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 PIRSF PIRSF000144 53 441 1.6E-54 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Pfam PF00384 Molybdopterin oxidoreductase 61 489 7.0E-88 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Pfam PF01568 Molydopterin dinucleotide binding domain 576 683 5.6E-29 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:1.20.5.460 691 713 1.8E-12 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 1.7E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:2.40.40.20 536 688 3.0E-38 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 9.1E-274 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 SUPERFAMILY SSF53706 1 564 7.72E-191 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:3.40.228.10 168 256 1.9E-25 T 28-03-2018 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 616 643 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 SUPERFAMILY SSF50692 566 703 3.62E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS24290 e0cddd7d0ef3bc0d0b28d95864d22c66 716 Gene3D G3DSA:3.40.50.740 257 535 8.2E-78 T 28-03-2018 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 SUPERFAMILY SSF48179 164 287 1.05E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 285 1.1E-16 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 PIRSF PIRSF000103 1 288 6.3E-60 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 Gene3D G3DSA:3.40.50.720 1 164 3.7E-28 T 28-03-2018 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 Gene3D G3DSA:1.10.1040.10 165 288 3.2E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 4.0E-35 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CO704_RS11205 37db3568c0914e9566d664286f16b3b3 288 SUPERFAMILY SSF51735 3 164 1.22E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 SUPERFAMILY SSF46548 7 84 3.66E-16 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 Pfam PF02754 Cysteine-rich domain 164 250 6.8E-15 T 28-03-2018 IPR004017 Cysteine-rich domain CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 Pfam PF02754 Cysteine-rich domain 296 378 4.4E-14 T 28-03-2018 IPR004017 Cysteine-rich domain CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 4 397 2.3E-222 T 28-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 Gene3D G3DSA:1.10.1060.10 4 93 2.4E-14 T 28-03-2018 CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS06675 b3c83e9932492727a29cb7a0f5bd0bad 398 Pfam PF13183 4Fe-4S dicluster domain 7 71 1.7E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 27.951 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 SUPERFAMILY SSF52540 1 208 9.31E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 Gene3D G3DSA:3.40.50.300 1 205 2.6E-45 T 28-03-2018 CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 2.3E-63 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CO704_RS14525 edd836a4c701ec63a96328ecaf174dad 212 Pfam PF02223 Thymidylate kinase 8 197 1.1E-55 T 28-03-2018 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 SUPERFAMILY SSF51735 2 150 7.22E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Gene3D G3DSA:1.10.1740.10 312 396 6.6E-29 T 28-03-2018 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 9.6E-179 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Gene3D G3DSA:3.40.50.720 1 150 1.7E-50 T 28-03-2018 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 SUPERFAMILY SSF55347 126 274 2.22E-61 T 28-03-2018 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 PIRSF PIRSF006205 1 399 4.2E-156 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.8E-36 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 9.7E-47 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 SUPERFAMILY SSF69055 301 393 4.58E-31 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.022 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS19290 7a72ef3cd3a4ee0a081686e1984e68f1 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 4.3E-41 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Pfam PF03483 B3/4 domain 212 385 7.2E-72 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.30.56.10 145 184 2.2E-8 T 28-03-2018 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Pfam PF01588 Putative tRNA binding domain 45 145 8.3E-27 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SUPERFAMILY SSF54991 696 794 5.62E-29 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.30.56.10 1 53 2.2E-11 T 28-03-2018 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SUPERFAMILY SSF50249 36 197 9.06E-51 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SUPERFAMILY SSF55681 467 690 6.46E-54 T 28-03-2018 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SMART SM00874 403 471 9.1E-32 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.55 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SUPERFAMILY SSF56037 196 394 6.54E-78 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.30.70.380 698 794 5.2E-23 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SMART SM00873 212 385 3.8E-100 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.5E-293 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.30.56.10 402 475 2.9E-25 T 28-03-2018 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SUPERFAMILY SSF46955 403 475 2.11E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 4.1E-27 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.30.930.10 490 690 6.2E-38 T 28-03-2018 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 SMART SM00896 701 794 5.8E-43 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.3E-21 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:3.50.40.10 195 395 1.1E-74 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CO704_RS13805 e0c1879a8d87611649966367171ec6bc 795 Gene3D G3DSA:2.40.50.140 54 144 3.1E-44 T 28-03-2018 CO704_RS06950 0c17389a03bbcd22807ff7ad619951f0 222 Gene3D G3DSA:1.10.3720.10 2 217 9.1E-36 T 28-03-2018 CO704_RS06950 0c17389a03bbcd22807ff7ad619951f0 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 1.4E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS06950 0c17389a03bbcd22807ff7ad619951f0 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 208 1.8E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06950 0c17389a03bbcd22807ff7ad619951f0 222 SUPERFAMILY SSF161098 14 202 7.72E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11370 fd4a92312ce4f3a462551b17ce95d459 116 SUPERFAMILY SSF142906 1 115 4.45E-27 T 28-03-2018 CO704_RS11370 fd4a92312ce4f3a462551b17ce95d459 116 Pfam PF04237 YjbR 13 112 7.4E-17 T 28-03-2018 IPR007351 Uncharacterised protein YjbR CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 Pfam PF03466 LysR substrate binding domain 92 294 6.8E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 Gene3D G3DSA:1.10.10.10 1 90 2.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 Gene3D G3DSA:3.40.190.10 180 270 2.5E-19 T 28-03-2018 CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 SUPERFAMILY SSF53850 92 296 8.93E-30 T 28-03-2018 CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 SUPERFAMILY SSF46785 1 82 2.23E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09490 9b8465b7b219741db77d7b4caff40950 297 Gene3D G3DSA:3.40.190.10 91 179 3.1E-14 T 28-03-2018 CO704_RS15080 4a43c2edcbf9e153c5fc5b3f33846cea 186 Gene3D G3DSA:2.160.10.10 8 180 1.6E-32 T 28-03-2018 CO704_RS15080 4a43c2edcbf9e153c5fc5b3f33846cea 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.2E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS15080 4a43c2edcbf9e153c5fc5b3f33846cea 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 3.1E-5 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS15080 4a43c2edcbf9e153c5fc5b3f33846cea 186 SUPERFAMILY SSF51161 8 138 2.14E-30 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 280 5.6E-19 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Gene3D G3DSA:3.40.50.720 109 259 4.3E-30 T 28-03-2018 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 246 3.5E-32 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 SUPERFAMILY SSF52283 4 109 4.04E-19 T 28-03-2018 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.396 T 28-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Gene3D G3DSA:3.40.50.720 1 108 2.2E-22 T 28-03-2018 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 1.7E-28 T 28-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CO704_RS06335 057f90acfae48f8b431ce2bdc1f0535a 378 SUPERFAMILY SSF51735 91 245 3.16E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 Gene3D G3DSA:3.40.50.300 259 507 1.6E-35 T 28-03-2018 CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 SUPERFAMILY SSF52540 10 231 1.27E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 SUPERFAMILY SSF52540 275 490 1.33E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 SMART SM00382 34 222 1.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 SMART SM00382 287 483 1.7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 Gene3D G3DSA:3.40.50.300 6 242 6.6E-52 T 28-03-2018 CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 Pfam PF00005 ABC transporter 281 434 7.5E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS20390 e8d61d6665e90fec5d6f505d1b8d35e6 518 Pfam PF00005 ABC transporter 26 174 4.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS04205 b85f0058206b122aad0a7a4eeb190745 139 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 47 139 2.0E-29 T 28-03-2018 IPR004914 Antirestriction protein CO704_RS04205 b85f0058206b122aad0a7a4eeb190745 139 Pfam PF03230 Antirestriction protein 49 139 1.8E-32 T 28-03-2018 IPR004914 Antirestriction protein CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Gene3D G3DSA:3.40.50.300 2 267 5.5E-69 T 28-03-2018 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Gene3D G3DSA:3.40.50.300 272 529 2.7E-72 T 28-03-2018 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 SUPERFAMILY SSF52540 275 525 8.28E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Pfam PF00005 ABC transporter 26 184 2.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Pfam PF00005 ABC transporter 302 454 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 SUPERFAMILY SSF52540 5 256 5.11E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 SMART SM00382 311 502 6.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 SMART SM00382 34 234 1.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 2.6E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS06825 1abff933f98289fb656508fd48a527d6 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 0.3 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 SUPERFAMILY SSF46785 9 148 1.46E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 5.1E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 5.1E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 5.1E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 5.1E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 Pfam PF01047 MarR family 40 98 8.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 Gene3D G3DSA:1.10.10.10 12 152 2.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10650 ef4b2596e8297d14a738bf44688c8f2e 152 SMART SM00347 33 134 1.4E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 SMART SM01086 317 412 8.2E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Gene3D G3DSA:1.10.8.60 317 408 5.4E-33 T 28-03-2018 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 28-03-2018 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.8E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 SUPERFAMILY SSF52540 64 402 6.86E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 SMART SM00382 111 314 6.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.7E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.3E-215 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.597 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 SMART SM00994 12 51 1.0E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CO704_RS18175 9def124c0043e5bb1d479932ca0b5670 424 Gene3D G3DSA:3.40.50.300 56 315 2.3E-68 T 28-03-2018 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Gene3D G3DSA:3.40.1190.20 229 498 2.6E-50 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Pfam PF01256 Carbohydrate kinase 258 493 6.6E-75 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 323 333 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 SUPERFAMILY SSF64153 17 256 1.44E-62 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 437 447 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 24 220 3.6E-58 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.471 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 494 9.5E-88 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Gene3D G3DSA:3.40.50.10260 3 228 5.1E-64 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Pfam PF03853 YjeF-related protein N-terminus 40 199 1.6E-41 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 PIRSF PIRSF017184 15 503 6.9E-157 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 SUPERFAMILY SSF53613 234 496 6.16E-74 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS20995 dbdd4b7335d3accaa0c467087fdb9d40 503 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 502 23.343 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 549 6.4E-258 T 28-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 Pfam PF11941 Domain of unknown function (DUF3459) 460 549 2.1E-7 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CO704_RS01925 4df6ce13cfe152985657a78967537618 552 SMART SM00642 15 415 3.3E-151 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 SUPERFAMILY SSF51011 476 549 4.64E-16 T 28-03-2018 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 Gene3D G3DSA:3.20.20.80 4 476 1.0E-126 T 28-03-2018 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 Gene3D G3DSA:2.60.40.1180 477 552 2.3E-20 T 28-03-2018 CO704_RS01925 4df6ce13cfe152985657a78967537618 552 SUPERFAMILY SSF51445 5 473 2.05E-153 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS01925 4df6ce13cfe152985657a78967537618 552 Pfam PF00128 Alpha amylase, catalytic domain 30 373 8.8E-122 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS11130 82ecf02e562408e5f9a05d2d669b9169 268 SUPERFAMILY SSF56784 52 246 1.17E-39 T 28-03-2018 IPR023214 HAD-like domain CO704_RS11130 82ecf02e562408e5f9a05d2d669b9169 268 Gene3D G3DSA:3.40.50.1000 38 205 4.1E-23 T 28-03-2018 IPR023214 HAD-like domain CO704_RS11130 82ecf02e562408e5f9a05d2d669b9169 268 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 22 238 1.2E-57 T 28-03-2018 IPR005519 Acid phosphatase, class B-like CO704_RS11130 82ecf02e562408e5f9a05d2d669b9169 268 PIRSF PIRSF019271 1 268 3.5E-100 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CO704_RS11130 82ecf02e562408e5f9a05d2d669b9169 268 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 8 265 6.1E-87 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CO704_RS02360 9e5bbbf5805895f2bc0dd2448e7a3a69 864 Pfam PF00577 Outer membrane usher protein 197 776 1.6E-220 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CO704_RS02360 9e5bbbf5805895f2bc0dd2448e7a3a69 864 SUPERFAMILY SSF141729 31 164 2.35E-32 T 28-03-2018 CO704_RS02360 9e5bbbf5805895f2bc0dd2448e7a3a69 864 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CO704_RS02360 9e5bbbf5805895f2bc0dd2448e7a3a69 864 Pfam PF13954 PapC N-terminal domain 33 186 1.5E-47 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CO704_RS02360 9e5bbbf5805895f2bc0dd2448e7a3a69 864 Pfam PF13953 PapC C-terminal domain 786 849 1.4E-20 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 3.8E-114 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 PIRSF PIRSF000111 1 866 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Gene3D G3DSA:3.40.309.10 232 404 8.1E-25 T 28-03-2018 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 SUPERFAMILY SSF53720 6 453 3.93E-83 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Gene3D G3DSA:1.20.1090.10 644 868 1.4E-59 T 28-03-2018 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 SUPERFAMILY SSF56796 449 867 1.27E-117 T 28-03-2018 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Gene3D G3DSA:3.40.605.10 1 231 1.6E-33 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Pfam PF00171 Aldehyde dehydrogenase family 5 280 3.3E-27 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS09850 4f5e7c85737c10a167c1e1ef081a74f5 890 Gene3D G3DSA:3.40.50.1970 430 643 3.2E-50 T 28-03-2018 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 1.1E-203 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 Pfam PF00171 Aldehyde dehydrogenase family 16 480 3.4E-138 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 SUPERFAMILY SSF53720 2 486 4.84E-148 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 Gene3D G3DSA:3.40.605.10 1 262 1.9E-82 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS02605 40e02200e70b3320793e9cef8233192d 501 Gene3D G3DSA:3.40.309.10 263 462 4.5E-64 T 28-03-2018 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 2.5E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 2.5E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 2.5E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 2.5E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 SUPERFAMILY SSF63380 148 253 1.21E-27 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.082 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 SUPERFAMILY SSF52343 255 395 1.06E-34 T 28-03-2018 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Pfam PF00042 Globin 7 102 1.1E-14 T 28-03-2018 IPR000971 Globin GO:0020037 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 9.3E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 1.2E-15 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 SUPERFAMILY SSF46458 1 142 2.33E-37 T 28-03-2018 IPR009050 Globin-like CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Gene3D G3DSA:3.40.50.80 255 396 1.6E-21 T 28-03-2018 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Gene3D G3DSA:2.40.30.10 159 254 6.2E-25 T 28-03-2018 CO704_RS04810 2ae45e864ff828073185eb0dc148b1dd 396 Gene3D G3DSA:1.10.490.10 1 158 8.4E-39 T 28-03-2018 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 Gene3D G3DSA:3.30.1390.10 51 121 1.9E-27 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 2.0E-24 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.5E-45 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 SUPERFAMILY SSF48300 3 57 1.57E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.0E-18 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 SUPERFAMILY SSF54736 50 121 6.1E-23 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.5E-28 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.312 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22940 b74e89fd7e0145dc4840daf3f3400f1d 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-18 T 28-03-2018 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 214 551 3.3E-148 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 SUPERFAMILY SSF52794 4 88 1.23E-7 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 SUPERFAMILY SSF52794 104 205 2.62E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 Gene3D G3DSA:3.40.50.2300 2 84 0.058 T 28-03-2018 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 Gene3D G3DSA:3.40.50.2300 104 201 1.8E-37 T 28-03-2018 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 106 189 1.8E-39 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CO704_RS06925 e31941f9bc9e6cc94217e98493677fa8 562 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 107 193 9.6E-19 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS12020 f2a2bad71739f9b0bec6411bad8ca177 129 Gene3D G3DSA:3.10.129.10 1 129 7.1E-17 T 28-03-2018 CO704_RS12020 f2a2bad71739f9b0bec6411bad8ca177 129 Pfam PF13279 Thioesterase-like superfamily 12 125 3.9E-6 T 28-03-2018 CO704_RS12020 f2a2bad71739f9b0bec6411bad8ca177 129 SUPERFAMILY SSF54637 1 128 7.63E-22 T 28-03-2018 IPR029069 HotDog domain CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 Gene3D G3DSA:3.30.830.10 15 250 1.7E-26 T 28-03-2018 CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 SUPERFAMILY SSF63411 343 462 2.27E-5 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 Pfam PF05193 Peptidase M16 inactive domain 204 377 4.3E-16 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 Gene3D G3DSA:3.30.830.10 256 471 1.4E-23 T 28-03-2018 CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 SUPERFAMILY SSF63411 29 239 7.86E-24 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS24605 b698a7b0ac495ef08a0ba100510caa48 494 Pfam PF00675 Insulinase (Peptidase family M16) 49 158 1.1E-7 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 PIRSF PIRSF005572 2 384 6.1E-144 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 Gene3D G3DSA:3.40.640.10 1 237 9.6E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.8E-236 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.986 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 Gene3D G3DSA:3.90.1150.10 238 404 8.1E-53 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 Pfam PF00266 Aminotransferase class-V 5 368 2.9E-88 T 28-03-2018 IPR000192 Aminotransferase class V domain CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 SUPERFAMILY SSF53383 5 390 1.17E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS04910 7bf27537a72a1f059050c4fe1f41740e 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CO704_RS19445 2901161df1c33101088111f18e1751a4 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.9E-101 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CO704_RS19445 2901161df1c33101088111f18e1751a4 284 SUPERFAMILY SSF52374 3 281 8.04E-104 T 28-03-2018 CO704_RS19445 2901161df1c33101088111f18e1751a4 284 Gene3D G3DSA:3.30.1300.10 177 284 1.8E-29 T 28-03-2018 CO704_RS19445 2901161df1c33101088111f18e1751a4 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.726 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CO704_RS19445 2901161df1c33101088111f18e1751a4 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 65 1.0E-7 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS19445 2901161df1c33101088111f18e1751a4 284 Gene3D G3DSA:3.40.50.620 1 176 1.2E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19445 2901161df1c33101088111f18e1751a4 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 5.3E-117 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 Gene3D G3DSA:3.30.470.20 156 339 5.8E-32 T 28-03-2018 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 SUPERFAMILY SSF56059 79 274 1.94E-57 T 28-03-2018 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 327 1.3E-112 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 Gene3D G3DSA:3.40.50.20 1 69 7.1E-16 T 28-03-2018 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 SUPERFAMILY SSF52440 1 76 2.45E-15 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 SUPERFAMILY SSF51246 278 353 2.43E-20 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 Pfam PF02222 ATP-grasp domain 88 254 6.5E-55 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 Gene3D G3DSA:3.30.1490.20 94 155 1.1E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS05580 96e841064d9bfaa93de7a8026fd7051f 356 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.325 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 SUPERFAMILY SSF52540 111 346 1.78E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 SUPERFAMILY SSF63520 474 557 1.96E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 SMART SM00382 133 282 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Pfam PF00158 Sigma-54 interaction domain 111 274 8.5E-47 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:1.10.1790.10 836 932 8.3E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:1.10.1790.10 466 558 3.6E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 SUPERFAMILY SSF53062 574 667 1.33E-8 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 SUPERFAMILY SSF63520 829 930 3.14E-10 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:1.10.10.10 1 73 1.3E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:3.40.50.300 105 325 5.8E-23 T 28-03-2018 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:3.40.50.2300 705 802 3.7E-5 T 28-03-2018 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Gene3D G3DSA:3.40.50.510 559 692 2.6E-11 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS02860 9f628a939e4d4a830d4a170ae741da4b 932 Pfam PF00874 PRD domain 848 930 3.7E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21425 a570aa758289e8ea507955c181ca9e49 191 SUPERFAMILY SSF48498 90 179 1.5E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS21425 a570aa758289e8ea507955c181ca9e49 191 SUPERFAMILY SSF46689 3 60 6.67E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS21425 a570aa758289e8ea507955c181ca9e49 191 Gene3D G3DSA:1.10.357.10 53 180 5.5E-13 T 28-03-2018 CO704_RS21425 a570aa758289e8ea507955c181ca9e49 191 Gene3D G3DSA:1.10.10.60 2 52 2.5E-8 T 28-03-2018 CO704_RS07105 c803c8a83736536877e14281d30603f3 348 Pfam PF01769 Divalent cation transporter 215 336 4.7E-26 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CO704_RS07105 c803c8a83736536877e14281d30603f3 348 Gene3D G3DSA:3.10.580.10 26 152 1.4E-13 T 28-03-2018 CO704_RS07105 c803c8a83736536877e14281d30603f3 348 SUPERFAMILY SSF161093 172 343 1.83E-46 T 28-03-2018 CO704_RS07105 c803c8a83736536877e14281d30603f3 348 Gene3D G3DSA:1.10.357.20 171 346 2.5E-38 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CO704_RS07105 c803c8a83736536877e14281d30603f3 348 Pfam PF00571 CBS domain 34 90 4.5E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS07105 c803c8a83736536877e14281d30603f3 348 SUPERFAMILY SSF54631 33 162 1.44E-15 T 28-03-2018 CO704_RS01595 f88475622b8507c2273885a361d44bd2 375 Gene3D G3DSA:1.10.10.60 297 352 6.5E-7 T 28-03-2018 CO704_RS01595 f88475622b8507c2273885a361d44bd2 375 Pfam PF13556 PucR C-terminal helix-turn-helix domain 315 372 1.8E-17 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CO704_RS01595 f88475622b8507c2273885a361d44bd2 375 Pfam PF05651 Putative sugar diacid recognition 6 138 4.4E-52 T 28-03-2018 IPR008599 Putative sugar diacid recognition CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.279 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 SMART SM00358 156 224 2.2E-23 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 SUPERFAMILY SSF54768 109 223 5.34E-27 T 28-03-2018 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.7E-33 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 Gene3D G3DSA:1.10.1520.10 5 148 2.2E-44 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 Gene3D G3DSA:3.30.160.20 149 226 6.3E-21 T 28-03-2018 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 SUPERFAMILY SSF69065 5 159 4.19E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 5.1E-14 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 SMART SM00535 21 149 1.7E-57 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CO704_RS04610 8b8a9afb663383f3ae2cef6e794331a0 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.8E-73 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 Gene3D G3DSA:3.40.50.300 1 249 6.2E-79 T 28-03-2018 CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 Pfam PF00005 ABC transporter 19 173 1.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 PIRSF PIRSF039085 1 249 3.5E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 SMART SM00382 28 221 6.4E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08545 84fd10796278aae58cd7ca67f2132d31 250 SUPERFAMILY SSF52540 4 243 1.56E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 Pfam PF00889 Elongation factor TS 71 263 4.3E-67 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.337 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 28-03-2018 IPR009060 UBA-like GO:0005515 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 SUPERFAMILY SSF54713 142 281 8.11E-54 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 Gene3D G3DSA:1.10.8.10 1 56 1.0E-23 T 28-03-2018 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 SUPERFAMILY SSF54713 56 139 2.62E-21 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 Gene3D G3DSA:3.30.479.20 148 279 3.0E-49 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 Gene3D G3DSA:3.30.479.20 58 147 5.3E-15 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS19305 0a8d7123fd1b99274f92ebe4080b29e4 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 4.9E-122 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS20395 37528a642970cea004c2e4c95f6bcf39 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 344 7.4E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS20395 37528a642970cea004c2e4c95f6bcf39 371 Gene3D G3DSA:1.10.3470.10 11 347 8.0E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 SUPERFAMILY SSF52402 6 209 1.12E-76 T 28-03-2018 CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.8E-66 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 Gene3D G3DSA:3.40.50.620 2 300 4.5E-43 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.0E-168 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 PIRSF PIRSF002936 1 302 1.3E-155 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CO704_RS03675 65f76ee39b7a304153d274ce01e2219a 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.418 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.1E-115 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.0E-13 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 SUPERFAMILY SSF47203 360 507 6.6E-22 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Gene3D G3DSA:1.20.140.10 350 510 7.9E-19 T 28-03-2018 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Gene3D G3DSA:2.40.110.10 236 349 9.1E-16 T 28-03-2018 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 6.7E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Gene3D G3DSA:1.10.540.10 76 235 9.0E-31 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 SUPERFAMILY SSF56645 117 355 2.62E-45 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CO704_RS18995 33d597e025a51be5241e9519e517ed83 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 1.7E-8 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 Gene3D G3DSA:1.10.530.10 273 451 1.2E-32 T 28-03-2018 CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 268 2.9E-26 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 SUPERFAMILY SSF53955 433 445 2.11E-32 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 SUPERFAMILY SSF53955 246 398 2.11E-32 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 Pfam PF01464 Transglycosylase SLT domain 299 403 1.6E-20 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 Gene3D G3DSA:3.40.190.10 33 206 2.9E-21 T 28-03-2018 CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 472 45.453 T 28-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 SMART SM00062 44 269 1.8E-34 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS04780 3052245d8eef926384eb0e7ed07e575b 516 SUPERFAMILY SSF53850 40 267 1.88E-30 T 28-03-2018 CO704_RS11895 062f76d937418f9e657ee15477a0d4f7 881 Pfam PF11739 Dicarboxylate transport 658 859 2.7E-62 T 28-03-2018 IPR021730 Dicarboxylate transport CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 PIRSF PIRSF004750 5 280 9.9E-128 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 TIGRFAM TIGR03138 QueF: queuine synthase 9 280 5.4E-127 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 SUPERFAMILY SSF55620 184 268 8.15E-11 T 28-03-2018 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 Gene3D G3DSA:3.30.1130.10 143 280 2.4E-49 T 28-03-2018 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 Pfam PF14489 QueF-like protein 194 268 5.4E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 280 164.193 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 Gene3D G3DSA:3.30.1130.10 20 135 1.1E-39 T 28-03-2018 CO704_RS03495 508c4a999da2e4667b8702c1cbe780e3 280 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 20 129 1.1E-48 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF04829 Pre-toxin domain with VENN motif 4355 4403 2.0E-17 T 28-03-2018 IPR006914 VENN motif-containing domain CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2665 2832 0.0016 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1846 1977 1.6E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 679 754 0.011 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 370 446 1.2E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1978 2039 0.0013 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 35 326 1.2E-59 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1600 1662 0.053 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 447 618 2.4E-7 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 3209 3395 0.15 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1663 1845 2.5E-7 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 986 1141 8.4E-9 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2265 2387 1.7E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2442 2581 2.8E-4 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2582 2664 7.6E-6 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1217 1370 9.8E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2388 2441 0.0078 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1453 1599 1.0E-7 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 838 985 1.8E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 619 678 0.12 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2040 2171 4.0E-5 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 2172 2264 1.8E-8 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 1371 1452 6.1E-6 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 755 837 3.6E-4 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF13332 Haemagluttinin repeat 3468 3530 3.3E-9 T 28-03-2018 IPR025157 Hemagglutinin repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF13332 Haemagluttinin repeat 3839 4013 2.8E-39 T 28-03-2018 IPR025157 Hemagglutinin repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF13332 Haemagluttinin repeat 3606 3738 2.8E-12 T 28-03-2018 IPR025157 Hemagglutinin repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF13332 Haemagluttinin repeat 3535 3594 1.2E-5 T 28-03-2018 IPR025157 Hemagglutinin repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 65 164 1.7E-17 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2104 2142 0.0084 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2160 2201 0.61 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1594 1630 0.011 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2433 2470 0.055 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 917 951 1.9E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2359 2391 0.039 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2047 2084 0.031 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1927 1963 0.02 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 628 668 0.18 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1106 1135 0.5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1379 1419 4.5E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1886 1923 0.026 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2456 2486 0.014 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1809 1846 0.008 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1419 1455 0.05 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 764 804 4.4E-5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 844 881 0.16 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1769 1806 7.5E-6 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2239 2276 0.026 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 649 686 2.2 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1401 1436 0.007 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2591 2631 0.0014 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 727 764 0.038 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 993 1028 2.1 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1670 1706 0.19 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1164 1202 0.051 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2008 2043 9.9E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 393 431 0.053 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 331 367 1.7 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1127 1160 0.057 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 804 842 0.41 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1554 1593 0.02 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1517 1554 0.0031 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 SMART SM00912 47 169 3.4E-48 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 SUPERFAMILY SSF51126 453 612 1.98E-5 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Pfam PF05860 haemagglutination activity domain 41 168 9.7E-33 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 Gene3D G3DSA:2.160.20.10 3468 3593 0.0013 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 SUPERFAMILY SSF51126 333 359 6.91E-56 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS10210 2615a4899e07394fddeaedc7dfa3183e 4616 SUPERFAMILY SSF51126 39 293 6.91E-56 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Gene3D G3DSA:1.10.287.380 877 946 4.3E-24 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.0E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF46589 884 947 6.28E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 944 5.7E-17 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.9E-230 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF47323 642 899 1.08E-71 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Gene3D G3DSA:1.10.730.10 631 816 1.2E-55 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 825 6.0E-44 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF50677 191 365 3.92E-56 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF52374 364 571 1.27E-135 T 28-03-2018 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF52374 1 192 1.27E-135 T 28-03-2018 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 SUPERFAMILY SSF52374 609 641 1.27E-135 T 28-03-2018 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.236 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CO704_RS02040 17de3d7dde5e872168406a679128a5f3 951 Gene3D G3DSA:3.40.50.620 2 630 9.6E-134 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS02710 559fab6d682fc7db72fe353d09d6098c 208 Gene3D G3DSA:3.90.1530.10 40 149 2.3E-11 T 28-03-2018 CO704_RS02710 559fab6d682fc7db72fe353d09d6098c 208 SUPERFAMILY SSF110849 46 177 5.76E-20 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS02710 559fab6d682fc7db72fe353d09d6098c 208 Pfam PF02195 ParB-like nuclease domain 53 109 5.4E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS02710 559fab6d682fc7db72fe353d09d6098c 208 SMART SM00470 48 145 1.2E-4 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 SUPERFAMILY SSF88659 510 612 2.35E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 SUPERFAMILY SSF88946 115 447 2.88E-103 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF04539 Sigma-70 region 3 459 534 3.5E-29 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Gene3D G3DSA:1.10.10.10 543 613 6.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF04546 Sigma-70, non-essential region 139 349 1.8E-75 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Gene3D G3DSA:1.10.10.10 450 500 7.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 3.6E-30 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 7.9E-121 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Gene3D G3DSA:1.10.601.10 3 114 2.0E-14 T 28-03-2018 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Gene3D G3DSA:1.10.601.10 115 449 1.0E-107 T 28-03-2018 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Pfam PF04545 Sigma-70, region 4 548 601 1.0E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 SUPERFAMILY SSF88659 453 526 1.54E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 613 46.716 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 3.6E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20330 c0ae0649dbeb2c40bcba96368f5ce5e3 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS13560 1b0cf1dcec873cd893f8cbcd85bacac9 400 SUPERFAMILY SSF103473 7 380 6.67E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS13560 1b0cf1dcec873cd893f8cbcd85bacac9 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 378 7.4E-123 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CO704_RS13560 1b0cf1dcec873cd893f8cbcd85bacac9 400 Pfam PF07690 Major Facilitator Superfamily 14 342 6.9E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS13560 1b0cf1dcec873cd893f8cbcd85bacac9 400 Gene3D G3DSA:1.20.1250.20 194 383 2.8E-11 T 28-03-2018 CO704_RS13560 1b0cf1dcec873cd893f8cbcd85bacac9 400 Gene3D G3DSA:1.20.1250.20 5 193 1.4E-33 T 28-03-2018 CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 Pfam PF00005 ABC transporter 24 182 1.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 SUPERFAMILY SSF52540 9 252 1.42E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 Gene3D G3DSA:3.40.50.300 6 256 1.7E-77 T 28-03-2018 CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 PIRSF PIRSF039085 5 257 1.2E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS13435 48ce73d003c9f8a55f7cc75af0cffcfb 257 SMART SM00382 33 230 2.2E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 Gene3D G3DSA:3.10.105.10 318 563 2.0E-45 T 28-03-2018 CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 SUPERFAMILY SSF53850 52 593 1.81E-105 T 28-03-2018 CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 Gene3D G3DSA:3.90.76.10 66 206 2.9E-19 T 28-03-2018 CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 PIRSF PIRSF002741 6 595 1.1E-152 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 Gene3D G3DSA:3.40.190.10 207 317 3.3E-18 T 28-03-2018 CO704_RS06840 1405741cfcd72d8f60b9338008a2d2cc 607 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 505 3.9E-69 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 Pfam PF00814 Glycoprotease family 28 150 2.3E-28 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 3.3E-67 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 Gene3D G3DSA:3.30.420.40 143 231 0.0029 T 28-03-2018 CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 SUPERFAMILY SSF53067 3 104 5.61E-29 T 28-03-2018 CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 SUPERFAMILY SSF53067 108 217 8.16E-30 T 28-03-2018 CO704_RS09190 32d72579d98186d9ce7c8257859b5523 231 Gene3D G3DSA:3.30.420.40 1 138 3.0E-38 T 28-03-2018 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Gene3D G3DSA:1.10.3090.10 199 441 2.2E-43 T 28-03-2018 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Gene3D G3DSA:3.30.460.10 35 198 4.6E-53 T 28-03-2018 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 SUPERFAMILY SSF81891 199 410 3.92E-49 T 28-03-2018 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 SUPERFAMILY SSF81301 41 197 3.38E-40 T 28-03-2018 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 228 288 3.5E-19 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Pfam PF12626 Polymerase A arginine-rich C-terminus 346 465 3.9E-40 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 468 38.724 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 466 3.7E-156 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CO704_RS19430 3e8dda3e5b803a78d525922679c67450 473 Pfam PF01743 Poly A polymerase head domain 69 201 3.5E-40 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CO704_RS07060 0091f29c6e6c919f372ea6e12b284598 239 Pfam PF02698 DUF218 domain 48 172 3.7E-17 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CO704_RS07060 0091f29c6e6c919f372ea6e12b284598 239 PIRSF PIRSF005011 1 239 2.9E-151 T 28-03-2018 IPR023604 Uncharacterised protein family SanA CO704_RS07060 0091f29c6e6c919f372ea6e12b284598 239 Gene3D G3DSA:3.40.50.620 38 174 1.4E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS06455 4b76a410f507bc1280e5d1368909a09c 182 SUPERFAMILY SSF55811 11 166 3.93E-35 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS06455 4b76a410f507bc1280e5d1368909a09c 182 Pfam PF00293 NUDIX domain 37 155 1.8E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS06455 4b76a410f507bc1280e5d1368909a09c 182 PIRSF PIRSF017340 2 172 4.2E-69 T 28-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 CO704_RS06455 4b76a410f507bc1280e5d1368909a09c 182 Gene3D G3DSA:3.90.79.10 2 181 1.3E-37 T 28-03-2018 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 SUPERFAMILY SSF52255 7 166 3.79E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.156 T 28-03-2018 IPR033747 Class I PurE CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 5.2E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 Pfam PF00731 AIR carboxylase 10 157 5.9E-63 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 Gene3D G3DSA:3.40.50.7700 1 166 4.6E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 SMART SM01001 8 159 5.8E-101 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CO704_RS05585 64dee13482ce74f84e9845a3d9672cb2 169 PIRSF PIRSF001338 5 168 1.5E-66 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF52540 416 618 3.25E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SMART SM00958 228 358 1.7E-83 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.1E-68 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF81767 227 368 6.8E-44 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Gene3D G3DSA:3.40.50.300 9 267 4.9E-56 T 28-03-2018 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Gene3D G3DSA:3.40.50.300 299 416 7.8E-8 T 28-03-2018 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Gene3D G3DSA:3.10.450.50 733 901 1.7E-56 T 28-03-2018 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF81886 620 840 3.4E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF81886 877 889 3.4E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Gene3D G3DSA:1.10.3060.10 635 732 1.1E-29 T 28-03-2018 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 28-03-2018 IPR004027 SEC-C motif CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.3E-39 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.811 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF52540 368 415 3.71E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SUPERFAMILY SSF52540 5 228 3.71E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 SMART SM00957 6 402 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Gene3D G3DSA:3.40.50.300 417 634 6.1E-52 T 28-03-2018 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 Pfam PF07517 SecA DEAD-like domain 7 402 1.3E-130 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 170 190 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 117 127 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 376 393 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 63 87 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 101 115 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 413 426 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 PRINTS PR00906 SecA protein signature 339 361 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CO704_RS19595 ccbfeb5bec28ee1487438dbcc6c2d20f 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CO704_RS16440 1d182acb1373a95238a7d860b2cfb1e5 302 SUPERFAMILY SSF142338 11 295 6.28E-85 T 28-03-2018 CO704_RS16440 1d182acb1373a95238a7d860b2cfb1e5 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.155 T 28-03-2018 IPR010119 Gluconeogenesis factor CO704_RS16440 1d182acb1373a95238a7d860b2cfb1e5 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 288 4.9E-76 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CO704_RS16440 1d182acb1373a95238a7d860b2cfb1e5 302 Gene3D G3DSA:3.40.50.10680 89 301 8.6E-40 T 28-03-2018 CO704_RS16440 1d182acb1373a95238a7d860b2cfb1e5 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 268 2.9E-99 T 28-03-2018 IPR010119 Gluconeogenesis factor CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 SUPERFAMILY SSF56672 393 786 4.28E-115 T 28-03-2018 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 Gene3D G3DSA:3.30.420.10 153 349 1.1E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 Gene3D G3DSA:3.90.1600.10 406 639 8.3E-52 T 28-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 Pfam PF03104 DNA polymerase family B, exonuclease domain 206 298 5.0E-6 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 Pfam PF00136 DNA polymerase family B 382 739 1.9E-40 T 28-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 SUPERFAMILY SSF53098 5 391 1.74E-95 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 28-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19765 7e8ee72a01a738980ecc61404b447aa8 786 SMART SM00486 150 557 4.8E-72 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 5.2E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 5.2E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Gene3D G3DSA:3.30.565.10 309 453 4.7E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 SMART SM00387 351 453 7.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 450 3.1E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 SUPERFAMILY SSF55874 294 452 3.67E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Gene3D G3DSA:1.20.5.1040 7 58 5.9E-8 T 28-03-2018 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Gene3D G3DSA:1.20.5.1040 131 186 7.0E-15 T 28-03-2018 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 SUPERFAMILY SSF47384 222 304 1.86E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 SMART SM00388 239 305 2.4E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Gene3D G3DSA:1.10.287.130 229 301 3.3E-13 T 28-03-2018 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 2.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS02480 64ca72409e827365b5e41a86dbc7e327 453 Pfam PF08521 Two-component sensor kinase N-terminal 22 162 4.5E-6 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 SUPERFAMILY SSF52317 5 196 3.32E-30 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 Gene3D G3DSA:1.10.10.60 266 306 2.5E-4 T 28-03-2018 CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 Pfam PF12833 Helix-turn-helix domain 237 304 1.4E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 Gene3D G3DSA:3.40.50.880 2 213 5.5E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 Pfam PF01965 DJ-1/PfpI family 5 175 5.6E-9 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 SMART SM00342 231 307 1.1E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 SUPERFAMILY SSF46689 214 264 8.51E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS24360 7773c6d1b51a4a3765f1582b9d2917ed 307 Gene3D G3DSA:1.10.10.60 214 265 8.2E-16 T 28-03-2018 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 PRINTS PR00123 ATP synthase A subunit signature 252 267 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 PRINTS PR00123 ATP synthase A subunit signature 105 121 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 PRINTS PR00123 ATP synthase A subunit signature 204 226 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 39 267 1.2E-43 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 272 16.017 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 ProSitePatterns PS00449 ATP synthase a subunit signature. 207 216 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 Gene3D G3DSA:1.20.120.220 96 272 9.8E-54 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 Pfam PF00119 ATP synthase A chain 47 266 5.4E-55 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24105 6f5e8225d06e7da1be7efa2dcca79229 272 SUPERFAMILY SSF81336 96 266 2.48E-49 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 SMART SM00062 24 239 7.9E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 Gene3D G3DSA:3.40.190.10 122 322 4.5E-38 T 28-03-2018 CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 SUPERFAMILY SSF53850 34 306 2.27E-45 T 28-03-2018 CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 Gene3D G3DSA:3.40.190.10 19 121 2.9E-11 T 28-03-2018 CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 228 3.2E-24 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS02320 e23cba3b8fa2f27e0ac87ca431402622 324 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 9.5E-145 T 28-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 CO704_RS18620 537449ae648ff2938387b21805d2f251 286 Gene3D G3DSA:3.40.50.1980 17 126 9.0E-23 T 28-03-2018 CO704_RS18620 537449ae648ff2938387b21805d2f251 286 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 47 65 1.2E-8 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS18620 537449ae648ff2938387b21805d2f251 286 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 171 186 1.2E-8 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS18620 537449ae648ff2938387b21805d2f251 286 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 195 213 1.2E-8 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS18620 537449ae648ff2938387b21805d2f251 286 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 78 93 1.2E-8 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS18620 537449ae648ff2938387b21805d2f251 286 SUPERFAMILY SSF53807 26 250 9.42E-41 T 28-03-2018 CO704_RS18620 537449ae648ff2938387b21805d2f251 286 Gene3D G3DSA:3.40.50.1980 127 282 1.1E-16 T 28-03-2018 CO704_RS18620 537449ae648ff2938387b21805d2f251 286 Pfam PF01497 Periplasmic binding protein 31 201 5.0E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82693 557 635 9.94E-6 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82866 298 493 6.67E-36 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:3.30.2090.10 709 796 8.4E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82714 710 794 3.27E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:3.30.70.1430 558 660 7.2E-14 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.5E-20 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:3.30.2090.10 186 272 2.3E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82693 142 187 3.24E-16 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82693 273 329 3.24E-16 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:1.20.1640.10 299 507 1.8E-31 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:3.30.70.1430 45 149 3.8E-25 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82693 45 140 7.32E-17 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Gene3D G3DSA:1.20.1640.10 812 1014 1.0E-31 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82866 793 1018 2.22E-41 T 28-03-2018 CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 SUPERFAMILY SSF82714 190 271 4.45E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS12790 1a2f94581d39c40e4d3a4cb128fe457d 1022 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 2.4E-151 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Pfam PF01565 FAD binding domain 47 166 2.9E-8 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Gene3D G3DSA:3.30.465.10 107 268 1.7E-78 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 SUPERFAMILY SSF55103 276 567 6.1E-117 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Gene3D G3DSA:3.30.70.610 350 434 2.6E-28 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Gene3D G3DSA:3.30.70.610 269 349 3.5E-21 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Gene3D G3DSA:3.30.43.10 2 104 5.7E-12 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 SUPERFAMILY SSF56176 10 271 1.78E-76 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 2.6E-145 T 28-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 Gene3D G3DSA:3.30.1370.20 435 518 5.3E-43 T 28-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CO704_RS16290 d92c5350463cd59f4d8093d9edc1e43d 577 PIRSF PIRSF000101 4 569 1.1E-300 T 28-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 Gene3D G3DSA:3.10.20.30 5 111 1.4E-32 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 PRINTS PR00355 Adrenodoxin signature 42 52 2.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 PRINTS PR00355 Adrenodoxin signature 60 74 2.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 PRINTS PR00355 Adrenodoxin signature 83 91 2.2E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 6.6E-62 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 2.8E-15 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 SUPERFAMILY SSF54292 4 109 6.13E-34 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS04935 612900a24deb72756cd43c5e95c7b5d1 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CO704_RS18765 752d1c6fdac4ccdc074b7f3d261534ea 501 SMART SM00052 248 491 1.9E-31 T 28-03-2018 IPR001633 EAL domain CO704_RS18765 752d1c6fdac4ccdc074b7f3d261534ea 501 Gene3D G3DSA:3.20.20.450 253 499 5.0E-44 T 28-03-2018 IPR001633 EAL domain CO704_RS18765 752d1c6fdac4ccdc074b7f3d261534ea 501 SUPERFAMILY SSF141868 255 496 4.18E-44 T 28-03-2018 IPR001633 EAL domain CO704_RS18765 752d1c6fdac4ccdc074b7f3d261534ea 501 Pfam PF00563 EAL domain 255 486 1.6E-39 T 28-03-2018 IPR001633 EAL domain CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 SUPERFAMILY SSF55252 82 149 4.84E-20 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 4.0E-29 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 151 1.8E-48 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.666 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 5.3E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 5.3E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 5.3E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 5.3E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 SUPERFAMILY SSF46785 3 77 7.25E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.8E-25 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 Gene3D G3DSA:3.30.1360.40 76 151 1.3E-26 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 5.9E-23 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS01510 dd769c36cc458923f9a17a3c7257e143 156 Gene3D G3DSA:1.10.10.10 8 69 1.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 2.0E-51 T 28-03-2018 CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 180 4.5E-5 T 28-03-2018 CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 SUPERFAMILY SSF51735 4 241 5.93E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00055 53b7321e4f6d4e04ef4ed344324837ca 241 Gene3D G3DSA:3.40.50.720 4 241 1.3E-64 T 28-03-2018 CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 Gene3D G3DSA:3.40.630.30 1 145 3.1E-23 T 28-03-2018 CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 9.4E-49 T 28-03-2018 IPR012660 Thioesterase, putative CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 1.8E-47 T 28-03-2018 IPR012660 Thioesterase, putative CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 SUPERFAMILY SSF54637 155 297 1.82E-40 T 28-03-2018 IPR029069 HotDog domain CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 SUPERFAMILY SSF55729 2 146 2.92E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 Pfam PF00583 Acetyltransferase (GNAT) family 27 122 8.6E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS23905 b207713f5febb71c07cf6b16f54a446c 313 Gene3D G3DSA:3.10.129.10 146 300 6.8E-19 T 28-03-2018 CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 SUPERFAMILY SSF102114 102 324 8.37E-28 T 28-03-2018 CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 Gene3D G3DSA:3.20.20.70 101 329 1.5E-20 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 1.4E-157 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 Pfam PF13353 4Fe-4S single cluster domain 111 179 1.0E-5 T 28-03-2018 CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 3.2E-144 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 PIRSF PIRSF004911 1 342 3.3E-122 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CO704_RS21380 b389236d1e9fe74449b8d38eea582f0b 342 Pfam PF04055 Radical SAM superfamily 118 244 9.8E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS13580 953d09435495cc24a9f8c63a77cc4e7e 457 PIRSF PIRSF006603 1 455 1.1E-55 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS13580 953d09435495cc24a9f8c63a77cc4e7e 457 Pfam PF01554 MatE 17 177 1.1E-38 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS13580 953d09435495cc24a9f8c63a77cc4e7e 457 Pfam PF01554 MatE 244 405 2.8E-37 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS13580 953d09435495cc24a9f8c63a77cc4e7e 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 50.93 T 28-03-2018 IPR022913 Multidrug resistance protein MdtK CO704_RS13580 953d09435495cc24a9f8c63a77cc4e7e 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.0E-120 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Gene3D G3DSA:3.40.960.10 127 233 1.1E-9 T 28-03-2018 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 SUPERFAMILY SSF52540 706 763 5.98E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 SUPERFAMILY SSF52540 416 650 5.98E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 SMART SM00487 399 604 1.5E-18 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Pfam PF04480 Protein of unknown function (DUF559) 148 205 6.8E-8 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Pfam PF00271 Helicase conserved C-terminal domain 698 750 1.3E-7 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Gene3D G3DSA:3.40.50.300 387 593 2.5E-23 T 28-03-2018 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Gene3D G3DSA:3.40.50.300 596 1011 1.7E-21 T 28-03-2018 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 Pfam PF00270 DEAD/DEAH box helicase 405 575 8.9E-16 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS11970 e5145fe547564c2d351fc3d65eeb7ddb 1142 SMART SM00490 646 752 7.9E-10 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 Gene3D G3DSA:1.20.1250.20 12 195 1.4E-27 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 Pfam PF07690 Major Facilitator Superfamily 17 406 6.5E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 Gene3D G3DSA:1.20.1250.20 256 464 6.3E-23 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 3.3E-8 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 3.3E-8 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 3.3E-8 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 3.3E-8 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 3.3E-8 T 28-03-2018 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 432 2.0E-74 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 SUPERFAMILY SSF103473 14 195 1.57E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24025 74c4e646cf0875d49482f3c983f2cd0a 465 SUPERFAMILY SSF103473 245 453 1.57E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 4.5E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 SUPERFAMILY SSF52540 6 219 5.35E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.1E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 SUPERFAMILY SSF50465 298 393 2.53E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.3E-238 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Gene3D G3DSA:3.40.50.300 2 74 5.6E-11 T 28-03-2018 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.3E-34 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.9E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.734 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Gene3D G3DSA:2.40.30.10 206 299 1.1E-31 T 28-03-2018 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Gene3D G3DSA:3.40.50.300 75 203 7.5E-31 T 28-03-2018 CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 SUPERFAMILY SSF50447 205 301 6.09E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS01070 4a8dfae2538707bfe974872da8be9800 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 28-03-2018 CO704_RS04100 95806c123ea2f64b1136ca06a93244fd 174 SUPERFAMILY SSF55729 15 151 3.85E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS04100 95806c123ea2f64b1136ca06a93244fd 174 Pfam PF13508 Acetyltransferase (GNAT) domain 91 150 3.0E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS04100 95806c123ea2f64b1136ca06a93244fd 174 Gene3D G3DSA:3.40.630.30 1 166 9.8E-15 T 28-03-2018 CO704_RS06450 0c019631fe787050b9891774f8018117 183 SUPERFAMILY SSF56300 1 173 8.07E-38 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS06450 0c019631fe787050b9891774f8018117 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 168 5.8E-43 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CO704_RS06450 0c019631fe787050b9891774f8018117 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 3.1E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CO704_RS06450 0c019631fe787050b9891774f8018117 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 28-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site CO704_RS06450 0c019631fe787050b9891774f8018117 183 Gene3D G3DSA:3.60.21.10 1 183 3.2E-28 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:3.30.70.1430 38 141 2.0E-29 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82693 566 671 6.28E-29 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:3.30.70.1430 568 671 5.3E-25 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82714 722 808 3.27E-24 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82866 806 1029 7.32E-45 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82866 298 497 2.75E-47 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82714 182 272 8.63E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:1.20.1640.10 828 1029 4.5E-37 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:1.20.1640.10 274 500 3.1E-42 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82693 138 182 3.4E-22 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82693 274 330 3.4E-22 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:3.30.70.1440 672 768 3.9E-22 T 28-03-2018 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.0E-111 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 Gene3D G3DSA:3.30.2090.10 180 273 2.8E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CO704_RS05695 7e1b97b026ac8c9d4b1d10e3dac4bd69 1036 SUPERFAMILY SSF82693 39 132 2.22E-27 T 28-03-2018 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 SUPERFAMILY SSF51998 175 698 1.62E-184 T 28-03-2018 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 100 171 1.1E-11 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 28-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 7.6E-140 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 SUPERFAMILY SSF48168 15 174 9.02E-60 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 104 696 1.5E-157 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.6E-29 T 28-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 Gene3D G3DSA:3.20.70.20 80 700 1.5E-157 T 28-03-2018 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03965 b21e5d2057ca032b8e9165363ebc0df6 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 6.2E-34 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.5E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.5E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.5E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 Gene3D G3DSA:3.40.50.720 173 237 1.0E-10 T 28-03-2018 CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 Gene3D G3DSA:3.40.50.720 11 172 1.5E-45 T 28-03-2018 CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 SUPERFAMILY SSF51735 10 233 7.42E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 196 0.0031 T 28-03-2018 CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 Pfam PF00106 short chain dehydrogenase 15 203 1.6E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25735 88ef9aaa63c595aa3f52e0458d4f86a8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 Gene3D G3DSA:3.40.630.10 150 480 1.7E-118 T 28-03-2018 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 PRINTS PR00481 Cytosol aminopeptidase signature 324 344 8.3E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 PRINTS PR00481 Cytosol aminopeptidase signature 353 368 8.3E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 PRINTS PR00481 Cytosol aminopeptidase signature 265 286 8.3E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 PRINTS PR00481 Cytosol aminopeptidase signature 243 260 8.3E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 PRINTS PR00481 Cytosol aminopeptidase signature 302 323 8.3E-46 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 166 469 7.7E-110 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 SUPERFAMILY SSF53187 159 475 2.26E-104 T 28-03-2018 CO704_RS16020 4e46430bd14282f353806e94ab40e1ff 480 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 328 335 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 2.4E-55 T 28-03-2018 CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 SUPERFAMILY SSF51735 15 253 2.06E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 Gene3D G3DSA:3.40.50.10090 11 46 7.8E-4 T 28-03-2018 CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 Gene3D G3DSA:3.40.50.720 47 254 2.3E-59 T 28-03-2018 CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03025 7d3873c8dd9e997de1f88201fc3bdde8 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS04820 95022541138dc142962fb1edef74a75a 199 Pfam PF01380 SIS domain 38 167 1.0E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS04820 95022541138dc142962fb1edef74a75a 199 Gene3D G3DSA:3.40.50.10490 2 198 1.7E-40 T 28-03-2018 CO704_RS04820 95022541138dc142962fb1edef74a75a 199 SUPERFAMILY SSF53697 7 188 1.54E-33 T 28-03-2018 CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 SUPERFAMILY SSF51430 13 327 3.4E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 Pfam PF00248 Aldo/keto reductase family 28 327 3.8E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 Gene3D G3DSA:3.20.20.100 15 329 4.3E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 283 296 3.8E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 282 3.8E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS05960 2560b9abb0925c8234eea2e2807184c5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 3.8E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 SUPERFAMILY SSF52540 17 225 2.37E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Gene3D G3DSA:3.40.50.300 18 236 1.0E-59 T 28-03-2018 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Pfam PF03880 DbpA RNA binding domain 511 580 2.0E-20 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Pfam PF12343 Cold shock protein DEAD box A 597 657 2.8E-8 T 28-03-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Pfam PF00271 Helicase conserved C-terminal domain 248 356 8.5E-29 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 SUPERFAMILY SSF52540 163 370 1.6E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Pfam PF00270 DEAD/DEAH box helicase 47 211 1.6E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 SMART SM00487 41 239 5.5E-65 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Gene3D G3DSA:3.40.50.300 237 524 3.5E-44 T 28-03-2018 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 SMART SM00490 275 356 1.5E-31 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 17 582 47.066 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CO704_RS01835 22ea7c5a290751230b46222a4ca137ad 657 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 170 178 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 SUPERFAMILY SSF48592 406 521 3.44E-77 T 28-03-2018 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 SUPERFAMILY SSF48592 7 134 3.44E-77 T 28-03-2018 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 SUPERFAMILY SSF54849 137 203 1.79E-24 T 28-03-2018 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 Gene3D G3DSA:1.10.560.10 374 516 2.0E-24 T 28-03-2018 IPR027413 GroEL-like equatorial domain CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.658 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 SUPERFAMILY SSF52029 184 376 7.5E-83 T 28-03-2018 IPR027409 GroEL-like apical domain CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 Gene3D G3DSA:3.50.7.10 186 373 2.1E-97 T 28-03-2018 IPR027409 GroEL-like apical domain CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 Gene3D G3DSA:1.10.560.10 1 185 1.6E-43 T 28-03-2018 IPR027413 GroEL-like equatorial domain CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.4E-96 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.9E-256 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS21390 71a86cf670c672b7a461f542e322ae43 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CO704_RS02890 3c598daff36e94f707a42a7dd521f5ba 248 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 7 244 4.5E-99 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS02890 3c598daff36e94f707a42a7dd521f5ba 248 Gene3D G3DSA:3.20.20.70 3 247 1.7E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS02890 3c598daff36e94f707a42a7dd521f5ba 248 Pfam PF07071 KDGP aldolase 7 226 3.0E-88 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 Pfam PF01259 SAICAR synthetase 7 231 7.2E-59 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 29.023 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 Gene3D G3DSA:3.30.200.20 1 93 2.1E-24 T 28-03-2018 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 Gene3D G3DSA:3.30.470.20 94 220 3.3E-44 T 28-03-2018 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 SUPERFAMILY SSF56104 3 232 2.03E-75 T 28-03-2018 CO704_RS05660 38268314a3267c012a0d938a247df1fe 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 1.7E-82 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 Pfam PF00664 ABC transporter transmembrane region 27 297 1.2E-57 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 SUPERFAMILY SSF52540 332 580 1.64E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 580 4.1E-267 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 Gene3D G3DSA:1.20.1560.10 7 329 1.1E-66 T 28-03-2018 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 Pfam PF00005 ABC transporter 359 509 2.6E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 Gene3D G3DSA:3.40.50.300 330 580 4.4E-80 T 28-03-2018 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 SUPERFAMILY SSF90123 14 325 5.89E-74 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15570 2ff073aa134e47a382140289b50c5da2 581 SMART SM00382 368 562 1.8E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05995 8d02b2599222b2b764fc4c7a17ad5ef2 413 Pfam PF07350 Protein of unknown function (DUF1479) 7 411 1.5E-146 T 28-03-2018 IPR010856 Protein of unknown function DUF1479 CO704_RS05995 8d02b2599222b2b764fc4c7a17ad5ef2 413 SUPERFAMILY SSF51197 4 411 3.78E-151 T 28-03-2018 CO704_RS05995 8d02b2599222b2b764fc4c7a17ad5ef2 413 Gene3D G3DSA:2.60.120.330 2 413 3.8E-126 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CO704_RS00010 2599eb54ca77177cf49742f960798102 300 Pfam PF03466 LysR substrate binding domain 90 295 5.9E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS00010 2599eb54ca77177cf49742f960798102 300 SUPERFAMILY SSF46785 4 112 6.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00010 2599eb54ca77177cf49742f960798102 300 Gene3D G3DSA:3.40.190.10 179 266 6.4E-27 T 28-03-2018 CO704_RS00010 2599eb54ca77177cf49742f960798102 300 SUPERFAMILY SSF53850 92 297 2.17E-43 T 28-03-2018 CO704_RS00010 2599eb54ca77177cf49742f960798102 300 Gene3D G3DSA:3.40.190.10 91 178 1.2E-11 T 28-03-2018 CO704_RS00010 2599eb54ca77177cf49742f960798102 300 Gene3D G3DSA:1.10.10.10 1 86 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00010 2599eb54ca77177cf49742f960798102 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 Pfam PF00155 Aminotransferase class I and II 160 456 1.4E-17 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 SMART SM00345 27 86 2.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 1.3E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 Gene3D G3DSA:1.10.10.10 15 88 2.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00415 c9dcc25026e589f181666178716120a0 495 SUPERFAMILY SSF53383 125 486 2.85E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS00415 c9dcc25026e589f181666178716120a0 495 Gene3D G3DSA:3.90.1150.10 390 490 1.5E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00415 c9dcc25026e589f181666178716120a0 495 SUPERFAMILY SSF46785 21 94 1.36E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00415 c9dcc25026e589f181666178716120a0 495 Gene3D G3DSA:3.40.640.10 149 389 9.5E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS24415 8150b983541c9ac920b99a3115b3df92 427 PIRSF PIRSF002808 3 426 9.6E-34 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS24415 8150b983541c9ac920b99a3115b3df92 427 Gene3D G3DSA:1.20.1250.20 221 420 5.1E-30 T 28-03-2018 CO704_RS24415 8150b983541c9ac920b99a3115b3df92 427 Gene3D G3DSA:1.20.1250.20 3 207 4.1E-32 T 28-03-2018 CO704_RS24415 8150b983541c9ac920b99a3115b3df92 427 SUPERFAMILY SSF103473 6 414 7.06E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24415 8150b983541c9ac920b99a3115b3df92 427 Pfam PF07690 Major Facilitator Superfamily 18 377 1.9E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 Pfam PF01612 3'-5' exonuclease 1 166 5.5E-38 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 Pfam PF00570 HRDC domain 209 275 6.8E-15 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 Gene3D G3DSA:1.10.150.80 191 289 1.0E-23 T 28-03-2018 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 SMART SM00341 206 285 2.6E-19 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 SMART SM00474 1 167 1.6E-45 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 TIGRFAM TIGR01388 rnd: ribonuclease D 1 367 1.6E-151 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 Gene3D G3DSA:3.30.420.10 1 190 1.6E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 SUPERFAMILY SSF47819 292 367 5.23E-23 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 SUPERFAMILY SSF53098 1 206 5.09E-66 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 SUPERFAMILY SSF47819 190 297 5.79E-31 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CO704_RS09205 667d08fb40af3c0143428718fe65b0be 369 Hamap MF_01899 Ribonuclease D [rnd]. 1 367 45.626 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 SUPERFAMILY SSF55261 288 419 6.7E-46 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.336 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Gene3D G3DSA:3.30.930.10 131 586 1.0E-100 T 28-03-2018 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 SUPERFAMILY SSF55681 108 287 1.15E-105 T 28-03-2018 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 SUPERFAMILY SSF55681 420 584 1.15E-105 T 28-03-2018 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Gene3D G3DSA:2.40.50.140 1 107 1.2E-25 T 28-03-2018 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Pfam PF02938 GAD domain 307 406 2.2E-30 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 SUPERFAMILY SSF50249 1 105 1.39E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 8.7E-17 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.3E-274 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CO704_RS08840 2a89a8019989172f7f0b7cfd2c25979f 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.1E-105 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.3E-69 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 SUPERFAMILY SSF52218 1 168 6.21E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 Pfam PF00258 Flavodoxin 5 160 1.8E-26 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 Gene3D G3DSA:3.40.50.360 1 76 7.2E-15 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 Gene3D G3DSA:3.40.50.360 77 173 7.1E-18 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03090 45e276de6181d12f25e4e9f9d56f2239 173 PIRSF PIRSF038996 1 171 6.0E-57 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CO704_RS24665 2de899cef52410095898b9919391e334 252 Gene3D G3DSA:3.90.470.20 14 138 1.9E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 2.0E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 Gene3D G3DSA:2.30.42.10 259 355 5.1E-22 T 28-03-2018 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 Gene3D G3DSA:2.40.10.10 152 258 3.9E-31 T 28-03-2018 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 Pfam PF13365 Trypsin-like peptidase domain 81 215 1.4E-28 T 28-03-2018 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 SMART SM00228 257 339 1.5E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 SUPERFAMILY SSF50494 45 254 5.19E-61 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 352 8.4E-170 T 28-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 SUPERFAMILY SSF50156 240 347 2.76E-20 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 Pfam PF13180 PDZ domain 258 348 8.5E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01520 afc3d010cda3a0a42a6228bd31f12ee2 355 Gene3D G3DSA:2.40.10.10 43 151 2.0E-31 T 28-03-2018 CO704_RS01735 7f257a614713365aeabc470242e14088 351 SUPERFAMILY SSF47384 121 194 7.06E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01735 7f257a614713365aeabc470242e14088 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 342 7.1E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01735 7f257a614713365aeabc470242e14088 351 Gene3D G3DSA:3.30.565.10 201 349 2.1E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01735 7f257a614713365aeabc470242e14088 351 SMART SM00387 242 350 1.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01735 7f257a614713365aeabc470242e14088 351 Gene3D G3DSA:1.10.287.130 126 192 6.7E-9 T 28-03-2018 CO704_RS01735 7f257a614713365aeabc470242e14088 351 SMART SM00388 136 196 5.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01735 7f257a614713365aeabc470242e14088 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01735 7f257a614713365aeabc470242e14088 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01735 7f257a614713365aeabc470242e14088 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.1E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01735 7f257a614713365aeabc470242e14088 351 SUPERFAMILY SSF55874 205 347 1.57E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01735 7f257a614713365aeabc470242e14088 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 8.1E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 Gene3D G3DSA:1.10.10.10 1 92 2.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.6E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 Pfam PF03466 LysR substrate binding domain 102 304 9.1E-17 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 SUPERFAMILY SSF46785 3 81 1.42E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 Gene3D G3DSA:3.40.190.10 181 276 5.2E-17 T 28-03-2018 CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 Gene3D G3DSA:3.40.190.10 94 180 1.2E-10 T 28-03-2018 CO704_RS10870 827dc75827a9b2ce2aea7dcbba4c71cd 309 SUPERFAMILY SSF53850 95 303 7.6E-30 T 28-03-2018 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 Gene3D G3DSA:2.170.130.10 152 266 5.2E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 SMART SM00965 79 129 2.1E-12 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 Pfam PF07660 Secretin and TonB N terminus short domain 81 128 5.2E-10 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 Pfam PF00593 TonB dependent receptor 360 848 4.3E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 833 850 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 154 850 4.6E-144 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 Pfam PF07715 TonB-dependent Receptor Plug Domain 157 255 2.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 156 850 1.4E-113 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 Gene3D G3DSA:2.40.170.20 267 850 2.6E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS00400 d3881598d835d95af8abaad87dcd1e1b 850 SUPERFAMILY SSF56935 155 850 2.01E-88 T 28-03-2018 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 SUPERFAMILY SSF51735 128 304 1.35E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 Gene3D G3DSA:3.40.50.720 152 282 3.3E-29 T 28-03-2018 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 SMART SM00829 22 339 2.0E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 SUPERFAMILY SSF50129 287 340 6.59E-5 T 28-03-2018 IPR011032 GroES-like CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 Pfam PF16884 N-terminal domain of oxidoreductase 9 116 5.0E-41 T 28-03-2018 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 Pfam PF00107 Zinc-binding dehydrogenase 161 298 6.9E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 Gene3D G3DSA:3.90.180.10 2 151 4.5E-35 T 28-03-2018 CO704_RS20490 ec9008652756aece05b8c6e31eaa47c8 343 SUPERFAMILY SSF50129 7 146 1.33E-42 T 28-03-2018 IPR011032 GroES-like CO704_RS06300 024b3d6f6ac7bb61771dc4f2c376bcf6 265 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 8.0E-44 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CO704_RS11655 4e44f30832b72d95ef05a5e772925cef 256 SUPERFAMILY SSF56281 1 244 1.3E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS11655 4e44f30832b72d95ef05a5e772925cef 256 Pfam PF12706 Beta-lactamase superfamily domain 31 214 1.3E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS11655 4e44f30832b72d95ef05a5e772925cef 256 Gene3D G3DSA:3.60.15.10 1 253 1.1E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 488 1.7E-79 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 Pfam PF07690 Major Facilitator Superfamily 24 414 2.3E-51 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 Gene3D G3DSA:1.20.1250.20 18 207 5.2E-35 T 28-03-2018 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 SUPERFAMILY SSF103473 464 495 7.98E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 SUPERFAMILY SSF103473 17 199 7.98E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 SUPERFAMILY SSF103473 254 424 7.98E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 Gene3D G3DSA:1.20.1250.20 258 496 2.3E-34 T 28-03-2018 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 6.1E-8 T 28-03-2018 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 6.1E-8 T 28-03-2018 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 6.1E-8 T 28-03-2018 CO704_RS06010 302490a5d596818cb76fad57adbe447b 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 208 226 6.1E-8 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SUPERFAMILY SSF54292 1 77 1.07E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SMART SM00926 221 275 3.7E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Gene3D G3DSA:3.40.50.740 440 706 7.5E-20 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SUPERFAMILY SSF50692 814 890 1.88E-11 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SUPERFAMILY SSF54862 82 213 8.37E-34 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SUPERFAMILY SSF53706 219 685 9.82E-82 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 654 2.4E-203 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 1.7E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Gene3D G3DSA:3.40.50.740 281 424 1.9E-9 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 SMART SM00929 88 128 1.9E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Gene3D G3DSA:3.10.20.30 1 165 1.4E-10 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Gene3D G3DSA:2.40.40.20 823 901 1.3E-10 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.1E-11 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Pfam PF01568 Molydopterin dinucleotide binding domain 823 889 1.4E-5 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Gene3D G3DSA:2.20.25.90 214 280 1.5E-9 T 28-03-2018 CO704_RS06570 ea76da3735d68f8a84c14849e1fd8be6 907 Pfam PF00384 Molybdopterin oxidoreductase 556 637 3.6E-8 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS03685 0edfdfcaaa902b655e6178794aa40aae 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 37.915 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CO704_RS03685 0edfdfcaaa902b655e6178794aa40aae 201 SUPERFAMILY SSF52540 23 195 5.9E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03685 0edfdfcaaa902b655e6178794aa40aae 201 Pfam PF01583 Adenylylsulphate kinase 27 179 2.1E-71 T 28-03-2018 CO704_RS03685 0edfdfcaaa902b655e6178794aa40aae 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 3.3E-86 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CO704_RS03685 0edfdfcaaa902b655e6178794aa40aae 201 Gene3D G3DSA:3.40.50.300 23 201 1.2E-48 T 28-03-2018 CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 Gene3D G3DSA:3.20.20.70 344 637 2.7E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 SUPERFAMILY SSF53613 5 329 2.81E-70 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 325 632 1.9E-145 T 28-03-2018 IPR018659 Protein of unknown function DUF2090 CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 Gene3D G3DSA:3.40.1190.20 3 333 4.3E-63 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 5 330 7.8E-127 T 28-03-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 Pfam PF00294 pfkB family carbohydrate kinase 7 322 7.1E-46 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS02640 eca3ee863c8e5b28cc91b6ff800aabb9 637 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Gene3D G3DSA:2.40.40.20 673 828 2.1E-34 T 28-03-2018 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.8E-24 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 SMART SM00926 39 93 9.1E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Gene3D G3DSA:3.40.50.740 99 269 4.9E-37 T 28-03-2018 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 SUPERFAMILY SSF53706 38 700 1.96E-201 T 28-03-2018 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Gene3D G3DSA:2.20.25.90 35 95 1.8E-14 T 28-03-2018 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 SUPERFAMILY SSF50692 688 828 6.1E-41 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.142 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Pfam PF00384 Molybdopterin oxidoreductase 96 568 1.7E-90 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 92 5.3E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 Gene3D G3DSA:3.40.50.740 304 669 7.6E-68 T 28-03-2018 CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 5.3E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CO704_RS05720 f81b73e812fec68eeaca76267eec32ee 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CO704_RS18985 4663fcb365db0ae530dc4097149f8957 255 Gene3D G3DSA:3.60.20.10 1 255 3.3E-46 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS18985 4663fcb365db0ae530dc4097149f8957 255 SUPERFAMILY SSF56235 2 253 9.92E-51 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS18985 4663fcb365db0ae530dc4097149f8957 255 Pfam PF13230 Glutamine amidotransferases class-II 1 254 8.6E-115 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 444 7.8E-115 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Pfam PF00501 AMP-binding enzyme 9 354 1.4E-51 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 365 429 4.3E-9 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Gene3D G3DSA:2.30.38.10 281 349 8.2E-10 T 28-03-2018 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Gene3D G3DSA:3.30.300.30 350 451 2.9E-19 T 28-03-2018 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 138 149 - T 28-03-2018 IPR020845 AMP-binding, conserved site CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 SUPERFAMILY SSF56801 8 450 5.1E-100 T 28-03-2018 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Gene3D G3DSA:3.40.50.980 144 280 2.7E-28 T 28-03-2018 CO704_RS06655 33faf3315f982a78c21c84b87d2c136f 451 Gene3D G3DSA:3.40.50.980 6 143 1.6E-24 T 28-03-2018 CO704_RS17975 654569eebcbd9b5bca97bb5a995d19b1 131 Gene3D G3DSA:2.60.120.10 2 131 8.6E-30 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS17975 654569eebcbd9b5bca97bb5a995d19b1 131 Pfam PF07883 Cupin domain 41 99 5.9E-11 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS17975 654569eebcbd9b5bca97bb5a995d19b1 131 SUPERFAMILY SSF51182 7 131 3.78E-33 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 Gene3D G3DSA:1.10.3680.10 42 170 2.2E-24 T 28-03-2018 IPR029024 TerB-like CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 Pfam PF05099 Tellurite resistance protein TerB 47 170 9.0E-11 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 Pfam PF00226 DnaJ domain 207 265 1.7E-8 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 SMART SM00271 203 268 5.6E-13 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 269 38.985 T 28-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 Gene3D G3DSA:1.10.287.110 171 268 3.5E-14 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 SUPERFAMILY SSF46565 131 264 8.16E-29 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 PRINTS PR00625 DnaJ domain signature 248 268 2.5E-6 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 PRINTS PR00625 DnaJ domain signature 224 239 2.5E-6 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19780 4a1c245966fc42904463dd51e3ca2922 270 PRINTS PR00625 DnaJ domain signature 206 224 2.5E-6 T 28-03-2018 IPR001623 DnaJ domain CO704_RS02075 c61c143c9a00298f4a02917426cda6ff 500 Gene3D G3DSA:3.40.50.300 7 366 1.9E-29 T 28-03-2018 CO704_RS02075 c61c143c9a00298f4a02917426cda6ff 500 SUPERFAMILY SSF52540 11 371 1.59E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02075 c61c143c9a00298f4a02917426cda6ff 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 3.0E-246 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal CO704_RS01445 ef3cbd6e70e13358b88c658ee38e72e3 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 5.9E-43 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CO704_RS01445 ef3cbd6e70e13358b88c658ee38e72e3 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.5E-43 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CO704_RS01445 ef3cbd6e70e13358b88c658ee38e72e3 162 PIRSF PIRSF018472 2 162 6.1E-58 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 SUPERFAMILY SSF52540 76 359 8.75E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 Pfam PF00270 DEAD/DEAH box helicase 28 198 1.4E-47 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 Pfam PF00271 Helicase conserved C-terminal domain 235 343 6.0E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 SMART SM00487 23 223 3.7E-59 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 Gene3D G3DSA:3.40.50.300 228 440 3.1E-44 T 28-03-2018 CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 49.762 T 28-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 Gene3D G3DSA:3.40.50.300 1 227 5.2E-60 T 28-03-2018 CO704_RS04555 bf96b9e176ccea8c0d429d85691be9f5 445 SMART SM00490 262 343 1.5E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 SUPERFAMILY SSF50800 70 166 7.33E-30 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.0E-29 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 7.4E-152 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 SUPERFAMILY SSF51621 1 74 1.5E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 SUPERFAMILY SSF51621 156 339 1.5E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 9.2E-191 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.6E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Gene3D G3DSA:3.20.20.60 1 77 8.4E-19 T 28-03-2018 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 SUPERFAMILY SSF52935 323 469 2.75E-36 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Gene3D G3DSA:3.20.20.60 163 321 9.8E-64 T 28-03-2018 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Gene3D G3DSA:2.40.33.10 78 162 6.3E-32 T 28-03-2018 CO704_RS13620 e6714dadec7c283851661849793b2dcb 470 Gene3D G3DSA:3.40.1380.20 322 470 6.4E-45 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS21745 883cc9189b8fb680aa276de5d649dd34 127 Gene3D G3DSA:3.10.450.160 41 121 2.8E-10 T 28-03-2018 CO704_RS21745 883cc9189b8fb680aa276de5d649dd34 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 48 114 2.0E-16 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS21745 883cc9189b8fb680aa276de5d649dd34 127 Pfam PF11776 Nickel/cobalt transporter regulator 65 114 3.6E-13 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 SUPERFAMILY SSF48435 28 476 5.49E-133 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 471 2.0E-23 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 500 528 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 Gene3D G3DSA:1.10.1240.20 403 471 1.4E-19 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 Pfam PF01464 Transglycosylase SLT domain 489 594 3.8E-32 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 SUPERFAMILY SSF53955 478 640 2.0E-50 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 Gene3D G3DSA:1.10.530.10 472 644 3.0E-40 T 28-03-2018 CO704_RS20050 edf54adebe9394d7e7583cbb6eed3224 644 Gene3D G3DSA:1.25.20.10 28 390 2.0E-50 T 28-03-2018 CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 Gene3D G3DSA:2.30.40.10 4 72 4.9E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 SUPERFAMILY SSF51338 2 64 2.13E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 SUPERFAMILY SSF51338 495 544 2.13E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 Pfam PF07969 Amidohydrolase family 52 536 6.0E-121 T 28-03-2018 IPR013108 Amidohydrolase 3 CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 SUPERFAMILY SSF51556 63 125 9.77E-48 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 SUPERFAMILY SSF51556 205 496 9.77E-48 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS18375 01539e94f1d02aa2980b9c54f354966d 622 Gene3D G3DSA:3.20.20.140 73 492 2.0E-36 T 28-03-2018 CO704_RS10815 7a6390591a26c02c3b7436467a30d638 163 SUPERFAMILY SSF55073 10 160 1.26E-30 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10815 7a6390591a26c02c3b7436467a30d638 163 SMART SM00267 1 159 1.1E-14 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10815 7a6390591a26c02c3b7436467a30d638 163 Pfam PF00990 Diguanylate cyclase, GGDEF domain 6 160 1.5E-28 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10815 7a6390591a26c02c3b7436467a30d638 163 Gene3D G3DSA:3.30.70.270 1 163 5.1E-34 T 28-03-2018 CO704_RS10815 7a6390591a26c02c3b7436467a30d638 163 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 4 160 1.9E-29 T 28-03-2018 IPR000160 GGDEF domain CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 Gene3D G3DSA:3.40.190.10 178 266 3.4E-21 T 28-03-2018 CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 Gene3D G3DSA:3.40.190.10 86 177 2.4E-11 T 28-03-2018 CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 Pfam PF03466 LysR substrate binding domain 90 293 2.2E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 SUPERFAMILY SSF53850 91 293 2.02E-37 T 28-03-2018 CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 SUPERFAMILY SSF46785 4 89 3.46E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00210 e9fea245e670109d54dfb26510079fc4 296 Gene3D G3DSA:1.10.10.10 1 85 6.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 PIRSF PIRSF001332 10 259 8.2E-99 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 SUPERFAMILY SSF117856 27 258 5.07E-87 T 28-03-2018 CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 Pfam PF03306 Alpha-acetolactate decarboxylase 29 246 4.4E-85 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 Gene3D G3DSA:3.30.1330.80 117 223 4.0E-44 T 28-03-2018 CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 28 257 1.2E-88 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CO704_RS12750 1bd7a0ce95623fe117b9a24fe4108dd4 259 Gene3D G3DSA:3.30.1330.80 26 116 1.1E-37 T 28-03-2018 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 149 9.6E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 50 683 1.3E-239 T 28-03-2018 IPR010100 TonB-dependent copper receptor CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 Gene3D G3DSA:2.170.130.10 39 152 3.6E-8 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 Gene3D G3DSA:2.40.170.20 159 683 3.3E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 Pfam PF00593 TonB dependent receptor 203 682 1.7E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 SUPERFAMILY SSF56935 48 293 1.06E-79 T 28-03-2018 CO704_RS06885 65500086bfb5826196de170b0b2bfc07 683 SUPERFAMILY SSF56935 322 683 1.06E-79 T 28-03-2018 CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 6.4E-59 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 SUPERFAMILY SSF55653 60 149 2.35E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.497 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 Gene3D G3DSA:3.10.430.100 63 148 7.5E-26 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 Gene3D G3DSA:3.40.5.10 1 49 1.1E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CO704_RS20845 5549888337f715c3dfdef4c64e79ee3e 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.4E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 Gene3D G3DSA:3.90.1170.30 31 110 5.0E-5 T 28-03-2018 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 SUPERFAMILY SSF111369 52 261 1.57E-19 T 28-03-2018 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 358 2.5E-57 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 Gene3D G3DSA:2.40.50.100 164 341 6.4E-6 T 28-03-2018 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 Gene3D G3DSA:1.10.287.470 111 163 3.1E-8 T 28-03-2018 CO704_RS12785 7db8cac308564b7c11565224383f2154 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 260 2.0E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 250 516 3.3E-78 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 SUPERFAMILY SSF160467 2 84 1.57E-8 T 28-03-2018 CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 SUPERFAMILY SSF50891 80 201 1.78E-36 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 SUPERFAMILY SSF50891 406 519 1.71E-17 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 Gene3D G3DSA:2.40.100.10 79 208 4.0E-46 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 Gene3D G3DSA:3.30.1360.40 1 78 1.6E-13 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 2 191 4.4E-59 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 SMART SM00796 1 191 7.5E-81 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 SMART SM00797 249 533 4.3E-104 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS06030 7c39b439aace3352b3492faf46b53ccd 535 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 228 519 8.2E-75 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 Gene3D G3DSA:3.10.580.10 267 314 1.1E-8 T 28-03-2018 CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 Gene3D G3DSA:3.40.50.300 1 266 8.0E-76 T 28-03-2018 CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 SMART SM00382 26 213 6.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 Pfam PF00571 CBS domain 266 308 1.1E-8 T 28-03-2018 IPR000644 CBS domain CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 SUPERFAMILY SSF54631 266 309 1.44E-9 T 28-03-2018 CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 Pfam PF00005 ABC transporter 18 163 3.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16230 a85c0dc88bf5ea2f907ee92326b590c1 315 SUPERFAMILY SSF52540 1 240 2.94E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 SUPERFAMILY SSF46689 7 76 7.18E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 190 3.4E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 Gene3D G3DSA:1.10.10.60 2 59 1.3E-14 T 28-03-2018 CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 1.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 Gene3D G3DSA:1.10.357.10 60 195 7.5E-21 T 28-03-2018 CO704_RS13505 b0c8cff45371159c736a77341047e8f9 199 SUPERFAMILY SSF48498 81 194 1.37E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Gene3D G3DSA:1.10.287.950 328 520 1.0E-48 T 28-03-2018 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 SMART SM00319 44 182 4.6E-67 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 SMART SM00304 216 268 3.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 SMART SM00283 269 516 1.8E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 SUPERFAMILY SSF58104 236 520 1.19E-75 T 28-03-2018 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.4E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 7.1E-60 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 SUPERFAMILY SSF47170 25 183 4.19E-51 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Gene3D G3DSA:1.10.287.1060 245 327 0.014 T 28-03-2018 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Pfam PF00672 HAMP domain 217 264 8.4E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Gene3D G3DSA:1.20.120.30 23 190 3.2E-47 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS02395 177bc3633dcef2c55363a837141df833 554 Pfam PF02203 Tar ligand binding domain homologue 1 176 1.2E-57 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 SUPERFAMILY SSF52172 6 132 8.4E-38 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 Gene3D G3DSA:1.10.10.10 132 238 2.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 6.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 SMART SM00862 156 232 1.8E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 Gene3D G3DSA:3.40.50.2300 4 131 9.4E-33 T 28-03-2018 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 SUPERFAMILY SSF46894 142 234 5.67E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 Pfam PF00072 Response regulator receiver domain 13 121 1.8E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS07360 105420cc12bf4fe92abe37e41eb189c7 240 SMART SM00448 11 121 2.1E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 SMART SM00319 44 178 3.8E-35 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 7.8E-79 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 SUPERFAMILY SSF58104 232 514 1.2E-73 T 28-03-2018 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Pfam PF00672 HAMP domain 214 260 7.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Pfam PF02203 Tar ligand binding domain homologue 1 168 4.8E-49 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 SMART SM00283 265 512 2.9E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 SUPERFAMILY SSF47170 25 177 4.58E-38 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Gene3D G3DSA:1.10.287.950 328 516 6.9E-49 T 28-03-2018 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 480 5.8E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 SMART SM00304 212 264 3.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Gene3D G3DSA:1.10.287.1060 242 327 0.16 T 28-03-2018 CO704_RS08750 4fc3015a9d256a015e880a0cb6e5fdfa 534 Gene3D G3DSA:1.20.120.30 23 186 4.0E-28 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS03715 4aa8687303e2c2ba6ec658e0a094b335 253 Gene3D G3DSA:3.40.1210.10 1 247 7.0E-81 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS03715 4aa8687303e2c2ba6ec658e0a094b335 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.6E-76 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS03715 4aa8687303e2c2ba6ec658e0a094b335 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 39.928 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS03715 4aa8687303e2c2ba6ec658e0a094b335 253 Pfam PF01975 Survival protein SurE 3 180 3.6E-56 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS03715 4aa8687303e2c2ba6ec658e0a094b335 253 SUPERFAMILY SSF64167 1 247 2.09E-81 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 Gene3D G3DSA:3.40.190.10 180 266 2.1E-12 T 28-03-2018 CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 SUPERFAMILY SSF46785 6 116 2.11E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 Gene3D G3DSA:1.10.10.10 3 93 4.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 SUPERFAMILY SSF53850 96 298 9.77E-34 T 28-03-2018 CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 Pfam PF03466 LysR substrate binding domain 94 296 1.6E-30 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS17815 08c97b64a56f0992d7e75de15b5d7c3a 302 Gene3D G3DSA:3.40.190.10 96 179 1.2E-18 T 28-03-2018 CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 Pfam PF00005 ABC transporter 18 165 6.9E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 SMART SM00382 27 213 1.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.9E-93 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 SUPERFAMILY SSF52540 1 216 3.12E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00500 672562ac236f862c100ee69a4c9dfb99 222 Gene3D G3DSA:3.40.50.300 1 219 1.2E-61 T 28-03-2018 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Gene3D G3DSA:1.20.1270.10 532 617 5.1E-20 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 SUPERFAMILY SSF53067 4 183 2.0E-65 T 28-03-2018 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.3E-291 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.878 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 SUPERFAMILY SSF100920 384 539 1.83E-60 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Gene3D G3DSA:3.30.420.40 197 366 1.0E-45 T 28-03-2018 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 SUPERFAMILY SSF53067 187 382 4.47E-68 T 28-03-2018 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Gene3D G3DSA:3.30.420.40 1 196 3.1E-81 T 28-03-2018 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Pfam PF00012 Hsp70 protein 4 601 2.4E-266 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 Gene3D G3DSA:2.60.34.10 390 531 8.0E-64 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 SUPERFAMILY SSF100934 507 601 5.62E-28 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.1E-80 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS19915 338e70354c216cc83d0c91a5223855be 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 510 6.9E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 8.0E-92 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 Gene3D G3DSA:3.30.1360.60 450 524 6.0E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 SUPERFAMILY SSF55604 453 524 2.62E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 523 5.1E-254 T 28-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 Pfam PF00367 phosphotransferase system, EIIB 454 485 1.4E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS13290 6c9454fbe8f96e583c5f50c6de298000 529 Pfam PF02378 Phosphotransferase system, EIIC 19 361 2.3E-86 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS05125 fac8e41bb5cf3ebfe5792bf43cba8a2b 265 SUPERFAMILY SSF53850 70 255 2.85E-11 T 28-03-2018 CO704_RS05125 fac8e41bb5cf3ebfe5792bf43cba8a2b 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 88 247 8.4E-22 T 28-03-2018 CO704_RS05125 fac8e41bb5cf3ebfe5792bf43cba8a2b 265 Gene3D G3DSA:3.40.190.10 96 243 9.6E-19 T 28-03-2018 CO704_RS00615 1a51d938d78c0718ad7b6397c9332b81 231 Pfam PF02678 Pirin 8 119 6.2E-37 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CO704_RS00615 1a51d938d78c0718ad7b6397c9332b81 231 PIRSF PIRSF006232 1 230 1.4E-56 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CO704_RS00615 1a51d938d78c0718ad7b6397c9332b81 231 SUPERFAMILY SSF51182 1 230 7.54E-79 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS00615 1a51d938d78c0718ad7b6397c9332b81 231 Gene3D G3DSA:2.60.120.10 11 131 5.4E-48 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS00615 1a51d938d78c0718ad7b6397c9332b81 231 Gene3D G3DSA:2.60.120.10 132 231 1.2E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:1.10.260.40 1 62 7.9E-7 T 28-03-2018 CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF13401 AAA domain 91 201 2.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF47413 2 44 2.55E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF01381 Helix-turn-helix 9 41 4.0E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:3.40.50.300 63 259 1.2E-8 T 28-03-2018 CO704_RS12215 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF52540 50 278 1.67E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:1.10.260.40 1 62 7.9E-7 T 28-03-2018 CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF13401 AAA domain 91 201 2.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF47413 2 44 2.55E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF01381 Helix-turn-helix 9 41 4.0E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:3.40.50.300 63 259 1.2E-8 T 28-03-2018 CO704_RS16795 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF52540 50 278 1.67E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:1.10.260.40 1 62 7.9E-7 T 28-03-2018 CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF13401 AAA domain 91 201 2.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF47413 2 44 2.55E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 Pfam PF01381 Helix-turn-helix 9 41 4.0E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 Gene3D G3DSA:3.40.50.300 63 259 1.2E-8 T 28-03-2018 CO704_RS09925 29a7ad17d7f21cb547a45d2b519c55bf 305 SUPERFAMILY SSF52540 50 278 1.67E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Pfam PF00128 Alpha amylase, catalytic domain 177 493 4.8E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 SUPERFAMILY SSF81296 11 106 1.73E-5 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 PIRSF PIRSF036918 1 603 5.4E-234 T 28-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 SMART SM00642 127 521 2.7E-90 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 SUPERFAMILY SSF51011 530 603 4.58E-10 T 28-03-2018 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Gene3D G3DSA:2.60.40.1180 553 604 2.9E-8 T 28-03-2018 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Pfam PF16657 Maltogenic Amylase, C-terminal domain 530 595 2.9E-6 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Gene3D G3DSA:3.20.20.80 115 511 2.6E-88 T 28-03-2018 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Gene3D G3DSA:3.20.20.80 512 552 5.5E-9 T 28-03-2018 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 SUPERFAMILY SSF51445 116 530 2.62E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 113 7.0E-10 T 28-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 CO704_RS18395 2a9eece965436de9051bf3aea787f1dd 605 Gene3D G3DSA:2.60.40.10 4 114 8.5E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 34 524 7.8E-96 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 Gene3D G3DSA:2.40.50.230 396 480 1.8E-20 T 28-03-2018 IPR006531 Gp5 N-terminal CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 SUPERFAMILY SSF69279 207 391 2.72E-39 T 28-03-2018 CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 524 1.8E-74 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 SUPERFAMILY SSF69279 22 205 6.23E-49 T 28-03-2018 CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 Pfam PF05954 Phage late control gene D protein (GPD) 42 361 4.6E-60 T 28-03-2018 CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 SUPERFAMILY SSF69255 390 480 2.3E-25 T 28-03-2018 CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 499 601 8.1E-31 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 Gene3D G3DSA:3.55.50.10 114 210 1.2E-26 T 28-03-2018 CO704_RS22100 5ca2b96a9499af6c71a8de88f8c8cd19 848 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 618 768 3.3E-48 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CO704_RS02690 168efb48de7bb049c5b7be39f6ea1bcd 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 274 3.0E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02690 168efb48de7bb049c5b7be39f6ea1bcd 308 Gene3D G3DSA:1.10.3720.10 22 281 3.7E-43 T 28-03-2018 CO704_RS02690 168efb48de7bb049c5b7be39f6ea1bcd 308 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 58 123 4.7E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS02690 168efb48de7bb049c5b7be39f6ea1bcd 308 SUPERFAMILY SSF161098 58 262 4.84E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 Gene3D G3DSA:1.10.357.10 33 221 9.9E-26 T 28-03-2018 CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 65 88 8.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 58 8.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 ProSitePatterns PS01081 TetR-type HTH domain signature. 57 87 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 90 3.0E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03215 ac1ec368ff511411d4f953c5000caadb 221 SUPERFAMILY SSF46689 36 112 9.98E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 5.4E-168 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 PIRSF PIRSF001434 1 395 5.4E-120 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 3.1E-118 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 Gene3D G3DSA:3.90.1150.10 259 395 1.3E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 Gene3D G3DSA:3.40.640.10 1 258 3.6E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS02560 6cc1096e6d0640e98a56dfd1f238d91f 395 SUPERFAMILY SSF53383 31 393 2.74E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 Gene3D G3DSA:1.20.1250.20 255 468 1.1E-22 T 28-03-2018 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 431 3.5E-70 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 Pfam PF07690 Major Facilitator Superfamily 15 405 3.3E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 SUPERFAMILY SSF103473 244 458 2.49E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 SUPERFAMILY SSF103473 8 194 2.49E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.0E-7 T 28-03-2018 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.0E-7 T 28-03-2018 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.0E-7 T 28-03-2018 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.0E-7 T 28-03-2018 CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 46.025 T 28-03-2018 IPR023721 Multidrug resistance protein MdtD, putative CO704_RS07370 0c7dbae64a51faf6216be10b31192c5a 471 Gene3D G3DSA:1.20.1250.20 6 196 1.1E-32 T 28-03-2018 CO704_RS10855 2d2a19a9338d7eaac4f729d518422709 130 Gene3D G3DSA:3.10.180.10 1 129 4.2E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS10855 2d2a19a9338d7eaac4f729d518422709 130 SUPERFAMILY SSF54593 5 127 8.46E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 Gene3D G3DSA:2.40.170.20 178 755 4.1E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 168 7.5E-8 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 Pfam PF00593 TonB dependent receptor 235 753 2.1E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 SUPERFAMILY SSF56935 71 546 4.58E-59 T 28-03-2018 CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 SUPERFAMILY SSF56935 574 755 4.58E-59 T 28-03-2018 CO704_RS12115 b751dc17c8ad7bcbd6ec6d02b91387f5 755 Gene3D G3DSA:2.170.130.10 53 177 2.5E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Pfam PF02817 e3 binding domain 114 147 1.6E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Gene3D G3DSA:3.90.1170.30 47 117 0.0013 T 28-03-2018 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Gene3D G3DSA:3.90.1170.30 1 46 1.5E-14 T 28-03-2018 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 408 2.5E-191 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Pfam PF00364 Biotin-requiring enzyme 5 76 3.2E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 SUPERFAMILY SSF47005 106 151 2.09E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Gene3D G3DSA:4.10.320.10 118 159 4.0E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Gene3D G3DSA:3.30.559.10 161 406 1.8E-91 T 28-03-2018 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 SUPERFAMILY SSF52777 178 407 3.56E-89 T 28-03-2018 CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 SUPERFAMILY SSF51230 2 88 2.09E-24 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS16670 54e86d7de54ca6c559f34f944fb719b7 408 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 178 406 3.0E-81 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 Gene3D G3DSA:1.10.620.20 1 293 3.8E-77 T 28-03-2018 CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 PIRSF PIRSF000355 1 317 5.5E-80 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 98 114 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 Pfam PF00268 Ribonucleotide reductase, small chain 10 281 2.5E-85 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 SUPERFAMILY SSF47240 7 320 3.25E-103 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS03960 46b9c5498884cadcea973b9e85c7da69 320 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 320 1.5E-143 T 28-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 SUPERFAMILY SSF161098 5 282 1.05E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 380 576 1.7E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 1.1E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 SUPERFAMILY SSF161098 300 586 1.83E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 Gene3D G3DSA:1.10.3720.10 302 588 1.4E-31 T 28-03-2018 CO704_RS15400 409bf8d8fe66e34a399ff2bc5d5311ce 589 Gene3D G3DSA:1.10.3720.10 2 275 6.1E-34 T 28-03-2018 CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 PRINTS PR01438 Universal stress protein signature 104 116 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 PRINTS PR01438 Universal stress protein signature 2 20 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 PRINTS PR01438 Universal stress protein signature 121 143 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 Pfam PF00582 Universal stress protein family 1 143 8.9E-24 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 Gene3D G3DSA:3.40.50.620 2 143 1.3E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS04255 a2f8ca1e9e495e948f70b048ca960b61 143 SUPERFAMILY SSF52402 1 143 2.18E-27 T 28-03-2018 CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 SUPERFAMILY SSF52540 143 284 6.14E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 363 48.591 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 347 1.5E-102 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 Gene3D G3DSA:3.40.50.300 121 151 0.07 T 28-03-2018 CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 SUPERFAMILY SSF52821 94 156 1.7E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 SUPERFAMILY SSF52821 7 66 1.7E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 Gene3D G3DSA:3.40.250.10 19 120 9.3E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 SMART SM00450 4 134 5.0E-10 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS05575 772dcea00cd902d2b664a08ee31be469 365 Gene3D G3DSA:3.40.50.300 152 357 1.5E-4 T 28-03-2018 CO704_RS00335 120ae711b133fedf3d26c4d7544ae8bf 423 SUPERFAMILY SSF48317 176 310 2.35E-28 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS00335 120ae711b133fedf3d26c4d7544ae8bf 423 SMART SM00014 172 292 1.9E-4 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS00335 120ae711b133fedf3d26c4d7544ae8bf 423 Gene3D G3DSA:1.20.144.10 76 314 4.2E-31 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS00335 120ae711b133fedf3d26c4d7544ae8bf 423 Pfam PF01569 PAP2 superfamily 183 283 3.5E-14 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 Gene3D G3DSA:3.40.50.300 6 196 1.4E-71 T 28-03-2018 CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 8.2E-59 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 SUPERFAMILY SSF52540 7 196 4.79E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.2E-78 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 PIRSF PIRSF015617 1 196 6.5E-67 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CO704_RS10305 5a7a1bf3239e847a204992b4f5a9be48 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.5E-5 T 28-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CO704_RS12860 fc724be0103a418b320d7d572340d698 812 Gene3D G3DSA:1.25.40.10 43 216 2.4E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS12860 fc724be0103a418b320d7d572340d698 812 SUPERFAMILY SSF48452 103 206 1.9E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS12860 fc724be0103a418b320d7d572340d698 812 SUPERFAMILY SSF48452 273 308 1.9E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS12860 fc724be0103a418b320d7d572340d698 812 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 19 812 5.5E-251 T 28-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 CO704_RS12860 fc724be0103a418b320d7d572340d698 812 Gene3D G3DSA:1.25.40.10 266 518 2.9E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.50.50.60 196 227 7.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 1.0E-239 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.1E-65 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 SUPERFAMILY SSF52833 1 101 1.04E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.50.50.60 439 512 0.022 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.50.50.60 341 438 6.8E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.40.30.10 103 195 2.2E-7 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 6.8E-38 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.8E-38 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 6.8E-38 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 6.8E-38 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 6.8E-38 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 SUPERFAMILY SSF52833 105 197 3.26E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.50.50.60 228 340 3.7E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 2.2E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Gene3D G3DSA:3.40.30.10 1 94 8.3E-28 T 28-03-2018 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 PIRSF PIRSF000238 1 521 1.0E-261 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 Pfam PF13192 Thioredoxin domain 126 193 7.6E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05610 bb785d4bfad13c7af5f189262962e2d9 522 SUPERFAMILY SSF51905 206 514 2.35E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 Gene3D G3DSA:3.30.1890.10 46 423 2.5E-65 T 28-03-2018 CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 Gene3D G3DSA:3.40.50.300 523 717 5.5E-32 T 28-03-2018 CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 Pfam PF13614 AAA domain 540 653 6.8E-13 T 28-03-2018 IPR025669 AAA domain CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 510 713 3.7E-44 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 Pfam PF02706 Chain length determinant protein 16 107 3.0E-20 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 3.2E-30 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain CO704_RS07445 1291c04f6b145d7bc1219429f8512d8a 722 SUPERFAMILY SSF52540 529 709 1.46E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13015 4fc76a18c4b2bda1a1fbde4079bd00bc 131 Pfam PF00892 EamA-like transporter family 48 119 9.5E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13015 4fc76a18c4b2bda1a1fbde4079bd00bc 131 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 21.987 T 28-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CO704_RS13015 4fc76a18c4b2bda1a1fbde4079bd00bc 131 SUPERFAMILY SSF103481 37 125 2.62E-11 T 28-03-2018 CO704_RS00945 971a46099e0415c6b73123fa8a77d531 394 Gene3D G3DSA:1.20.1250.20 201 388 1.3E-14 T 28-03-2018 CO704_RS00945 971a46099e0415c6b73123fa8a77d531 394 Gene3D G3DSA:1.20.1250.20 5 200 9.8E-20 T 28-03-2018 CO704_RS00945 971a46099e0415c6b73123fa8a77d531 394 Pfam PF07690 Major Facilitator Superfamily 14 317 3.5E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS00945 971a46099e0415c6b73123fa8a77d531 394 SUPERFAMILY SSF103473 4 386 1.14E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS00945 971a46099e0415c6b73123fa8a77d531 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 30.059 T 28-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 1.3E-110 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.229 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 Gene3D G3DSA:3.20.20.150 1 285 2.8E-61 T 28-03-2018 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 SMART SM00518 3 279 3.5E-132 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 4.1E-39 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 SUPERFAMILY SSF51658 1 277 1.01E-101 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS06930 fa549630e1cfa24ce95e626fca997e1f 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CO704_RS17490 de9857fe6d36532ad66bd6efd431444f 171 SMART SM00858 42 104 1.9E-12 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CO704_RS17490 de9857fe6d36532ad66bd6efd431444f 171 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 38 165 8.8E-41 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CO704_RS17490 de9857fe6d36532ad66bd6efd431444f 171 Gene3D G3DSA:3.90.1210.10 40 107 1.8E-17 T 28-03-2018 CO704_RS17490 de9857fe6d36532ad66bd6efd431444f 171 Pfam PF13144 Chaperone for flagella basal body P-ring formation 40 165 1.0E-42 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 Pfam PF01632 Ribosomal protein L35 2 60 1.8E-23 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 SUPERFAMILY SSF143034 2 64 3.79E-23 T 28-03-2018 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 7.9E-27 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.3E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.3E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.3E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS13820 0cf5bc7259eaad18f03393f6346bd984 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.094 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CO704_RS02270 19f73c6053a6c0398a16945fa6415e60 248 SUPERFAMILY SSF53167 5 211 1.01E-65 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS02270 19f73c6053a6c0398a16945fa6415e60 248 Gene3D G3DSA:3.40.50.1580 12 242 6.9E-48 T 28-03-2018 CO704_RS02270 19f73c6053a6c0398a16945fa6415e60 248 Pfam PF01048 Phosphorylase superfamily 18 204 9.5E-36 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS02270 19f73c6053a6c0398a16945fa6415e60 248 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Pfam PF00773 RNB domain 260 587 2.3E-107 T 28-03-2018 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SMART SM00955 260 588 2.3E-180 T 28-03-2018 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Pfam PF00575 S1 RNA binding domain 641 723 1.0E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 1.6E-282 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.7E-16 T 28-03-2018 IPR013668 Ribonuclease R winged-helix domain CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Pfam PF08206 Ribonuclease B OB domain 87 144 9.4E-23 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SUPERFAMILY SSF50249 138 235 1.56E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SUPERFAMILY SSF50249 222 641 9.71E-141 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Gene3D G3DSA:2.40.50.140 79 184 0.4 T 28-03-2018 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Gene3D G3DSA:1.10.10.10 18 78 1.9E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SUPERFAMILY SSF50249 67 147 2.1E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SMART SM00316 642 725 2.4E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.988 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SMART SM00357 86 145 5.8E-15 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 Gene3D G3DSA:2.40.50.140 641 726 1.5E-19 T 28-03-2018 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 3.8E-280 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CO704_RS20935 ad78a0ed987404fb0ea8e2182d57d05d 815 SUPERFAMILY SSF50249 644 724 5.55E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.597 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 Gene3D G3DSA:3.20.20.70 1 331 5.9E-107 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.7E-255 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 SMART SM00917 369 500 1.0E-36 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 SUPERFAMILY SSF110921 391 499 3.01E-26 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 Pfam PF00682 HMGL-like 4 273 2.0E-104 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 SUPERFAMILY SSF51569 1 290 5.27E-97 T 28-03-2018 CO704_RS19710 98a6f2c34471fd3dfdb1a29bdd921b37 525 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 2.4E-35 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 546 1.5E-187 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 571 699 1.0E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Gene3D G3DSA:3.90.100.10 596 713 7.0E-38 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.0E-27 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 PIRSF PIRSF009393 2 713 1.7E-274 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 SUPERFAMILY SSF53383 130 563 5.73E-98 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Gene3D G3DSA:3.40.640.10 130 424 4.2E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 SUPERFAMILY SSF55904 568 707 6.41E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS19225 f26bf657bcefeb9aadf70ed257e6b102 713 Gene3D G3DSA:3.90.1150.10 425 595 4.4E-52 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 Pfam PF00593 TonB dependent receptor 277 736 3.1E-27 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS14800 c715097588d75e05e656626243b9d79f 738 SUPERFAMILY SSF56935 81 738 9.62E-90 T 28-03-2018 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 SUPERFAMILY SSF56935 40 51 9.62E-90 T 28-03-2018 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 738 1.2E-119 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 721 738 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS14800 c715097588d75e05e656626243b9d79f 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 178 3.0E-7 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 Gene3D G3DSA:2.170.130.10 34 201 2.2E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS14800 c715097588d75e05e656626243b9d79f 738 Gene3D G3DSA:2.40.170.20 202 738 4.4E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS24500 e64fffc35c52b5015c6ca63818d427a7 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 9.1E-15 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS24500 e64fffc35c52b5015c6ca63818d427a7 300 Gene3D G3DSA:1.10.3720.10 19 287 4.1E-48 T 28-03-2018 CO704_RS24500 e64fffc35c52b5015c6ca63818d427a7 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 4.3E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24500 e64fffc35c52b5015c6ca63818d427a7 300 SUPERFAMILY SSF161098 93 280 2.35E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS00705 90bf033858c574e43cff0af8253e28e3 692 Gene3D G3DSA:3.20.20.80 138 688 1.2E-157 T 28-03-2018 CO704_RS00705 90bf033858c574e43cff0af8253e28e3 692 SUPERFAMILY SSF51445 142 572 5.1E-149 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS00705 90bf033858c574e43cff0af8253e28e3 692 SUPERFAMILY SSF51445 610 684 5.1E-149 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS00705 90bf033858c574e43cff0af8253e28e3 692 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 100 687 1.4E-256 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CO704_RS00705 90bf033858c574e43cff0af8253e28e3 692 Pfam PF02446 4-alpha-glucanotransferase 148 666 7.3E-131 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 447 8.6E-195 T 28-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 Gene3D G3DSA:3.40.50.300 56 369 8.3E-78 T 28-03-2018 CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 449 6.6E-193 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 SUPERFAMILY SSF52540 105 375 6.9E-91 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 SMART SM00382 170 353 3.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 369 8.7E-71 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS08425 9e15a923c5a92eb77e70ecc87b5bbb3f 452 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 360 369 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 SMART SM00072 1 174 7.4E-19 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 1.0E-68 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 SUPERFAMILY SSF52540 2 180 1.72E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 Pfam PF13238 AAA domain 5 140 7.8E-9 T 28-03-2018 CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 177 33.631 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22370 89758fa175f20caf818feefc8d00bbb0 194 Gene3D G3DSA:3.40.50.300 3 183 7.9E-27 T 28-03-2018 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 28-03-2018 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:3.30.70.920 64 158 1.0E-27 T 28-03-2018 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS15665 31552388ae2bc68bbd1b4365e3e3d017 164 SMART SM00344 12 121 2.1E-55 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Pfam PF04851 Type III restriction enzyme, res subunit 13 119 5.6E-9 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Gene3D G3DSA:3.40.50.300 415 589 4.0E-32 T 28-03-2018 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 44.012 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SUPERFAMILY SSF52540 459 582 1.17E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SUPERFAMILY SSF52540 37 82 1.17E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SMART SM00487 9 425 4.0E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Pfam PF00271 Helicase conserved C-terminal domain 435 544 1.2E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Pfam PF02151 UvrB/uvrC motif 632 665 1.2E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Gene3D G3DSA:4.10.860.10 607 671 4.7E-16 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SUPERFAMILY SSF52540 3 415 2.6E-137 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Gene3D G3DSA:3.40.50.300 10 410 2.3E-32 T 28-03-2018 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SMART SM00490 460 546 3.8E-20 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 SUPERFAMILY SSF46600 621 667 2.48E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CO704_RS16445 b356fdd984b7d477be4f70ef23f0061f 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.4E-20 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CO704_RS12025 17188328448ea408d7132784fee87e29 222 Gene3D G3DSA:3.40.50.620 41 193 6.9E-5 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS12025 17188328448ea408d7132784fee87e29 222 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.2E-64 T 28-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.345 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 SUPERFAMILY SSF103025 3 277 5.02E-92 T 28-03-2018 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Gene3D G3DSA:4.10.1250.10 232 276 1.4E-16 T 28-03-2018 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 5.2E-162 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 3.7E-18 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 3.4E-83 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Gene3D G3DSA:2.40.30.110 277 364 2.2E-18 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Gene3D G3DSA:3.30.1360.120 2 128 3.8E-34 T 28-03-2018 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 SUPERFAMILY SSF101790 272 360 5.56E-25 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 Gene3D G3DSA:3.30.1360.120 129 231 1.9E-24 T 28-03-2018 CO704_RS03010 f5b1825c4fbd57690079953a36b28770 365 PIRSF PIRSF006487 1 362 5.9E-81 T 28-03-2018 CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 Gene3D G3DSA:3.40.50.10490 103 275 3.2E-34 T 28-03-2018 CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 Gene3D G3DSA:1.10.10.10 1 102 4.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 Pfam PF01380 SIS domain 128 257 3.1E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 SUPERFAMILY SSF53697 103 278 5.09E-36 T 28-03-2018 CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 SUPERFAMILY SSF46689 1 77 5.55E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04765 478f6805d0bd8125ab9088ee53f70dd8 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-27 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS04795 f1b655806572ee76dc43e78019de0a39 253 Pfam PF13942 YfhG lipoprotein 56 229 2.5E-73 T 28-03-2018 IPR025262 Quorum-sensing regulator protein G CO704_RS04795 f1b655806572ee76dc43e78019de0a39 253 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 35 230 3.0E-50 T 28-03-2018 CO704_RS10725 df23ccc304d81e6526000765cb96a390 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 4.2E-8 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CO704_RS10725 df23ccc304d81e6526000765cb96a390 265 Gene3D G3DSA:3.40.50.300 8 264 4.3E-58 T 28-03-2018 CO704_RS10725 df23ccc304d81e6526000765cb96a390 265 SUPERFAMILY SSF52540 22 263 6.09E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10725 df23ccc304d81e6526000765cb96a390 265 Pfam PF00005 ABC transporter 40 194 3.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10725 df23ccc304d81e6526000765cb96a390 265 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 24 265 6.6E-112 T 28-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 Pfam PF07238 PilZ domain 693 789 4.4E-11 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 145 828 8.2E-297 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 SUPERFAMILY SSF141371 694 779 2.94E-9 T 28-03-2018 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 SUPERFAMILY SSF53448 271 553 2.53E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 Gene3D G3DSA:3.90.550.10 272 509 5.5E-47 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 Gene3D G3DSA:2.40.10.220 689 797 1.1E-17 T 28-03-2018 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 523 549 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 198 218 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 552 571 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 281 300 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 226 251 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 666 687 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 362 386 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 PRINTS PR01439 Cellulose synthase subunit A signature 592 611 1.1E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24575 7a6b98b28f4549a7022a3f29cec324e0 869 Pfam PF00535 Glycosyl transferase family 2 275 445 1.2E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 45 1.3E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 34 1.3E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 45 64 1.3E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 SUPERFAMILY SSF54909 80 160 2.68E-15 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 Gene3D G3DSA:3.30.70.920 70 162 3.4E-17 T 28-03-2018 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 Pfam PF13404 AsnC-type helix-turn-helix domain 18 59 4.7E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 Gene3D G3DSA:1.10.10.10 18 69 3.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 Pfam PF01037 Lrp/AsnC ligand binding domain 99 154 2.8E-15 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 SUPERFAMILY SSF46785 17 76 1.04E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 SMART SM00344 18 124 1.1E-35 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CO704_RS10665 1a72525ea0bcf32907ba03bfb57ae7e9 172 ProSitePatterns PS00519 AsnC-type HTH domain signature. 36 62 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 5.1E-64 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 SUPERFAMILY SSF55120 69 234 7.2E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 Gene3D G3DSA:3.30.70.580 62 150 7.6E-17 T 28-03-2018 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 7.1E-16 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 Pfam PF01479 S4 domain 4 43 5.3E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 SMART SM00363 3 74 8.7E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 SUPERFAMILY SSF55174 5 98 2.06E-12 T 28-03-2018 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 Gene3D G3DSA:3.30.70.1560 151 219 6.3E-22 T 28-03-2018 CO704_RS10285 dac30da1035e7eca317bc3a365d4e80e 291 Gene3D G3DSA:3.10.290.10 1 61 3.3E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 PIRSF PIRSF000388 1 264 4.6E-99 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 SUPERFAMILY SSF51621 4 263 7.33E-107 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 Gene3D G3DSA:3.20.20.60 1 263 9.8E-86 T 28-03-2018 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.663 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 2.3E-107 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CO704_RS19440 42d7114d1a364c2cfcaf2e3f65ba8288 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 5.5E-126 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 Gene3D G3DSA:3.40.1400.10 1 147 1.4E-61 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 143 2.0E-70 T 28-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 145 1.5E-59 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 PIRSF PIRSF005384 2 148 4.0E-58 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 SUPERFAMILY SSF89623 2 145 7.46E-58 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CO704_RS22390 6f46f1d58e572967a9a27e83678ac298 149 Pfam PF02502 Ribose/Galactose Isomerase 4 141 1.3E-53 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CO704_RS09175 adeb04f8d356c86fadae67e1ed683dd6 66 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.319 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CO704_RS09175 adeb04f8d356c86fadae67e1ed683dd6 66 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 47 5.0E-14 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CO704_RS09175 adeb04f8d356c86fadae67e1ed683dd6 66 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 9.5E-27 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CO704_RS06800 b7f1faffd0bce92614c31ed16dc2758f 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 93 1.0E-37 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CO704_RS06800 b7f1faffd0bce92614c31ed16dc2758f 94 Gene3D G3DSA:2.40.240.10 1 94 1.2E-31 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS06800 b7f1faffd0bce92614c31ed16dc2758f 94 Pfam PF01386 Ribosomal L25p family 4 91 2.2E-24 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CO704_RS06800 b7f1faffd0bce92614c31ed16dc2758f 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.351 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CO704_RS06800 b7f1faffd0bce92614c31ed16dc2758f 94 SUPERFAMILY SSF50715 1 93 4.01E-31 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 SMART SM00342 102 184 1.1E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 199 269 1.0E-7 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 SUPERFAMILY SSF46767 271 351 8.37E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 SUPERFAMILY SSF46689 87 135 5.38E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Gene3D G3DSA:3.30.160.70 188 269 1.4E-17 T 28-03-2018 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 139 180 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Pfam PF02805 Metal binding domain of Ada 13 77 2.9E-31 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 SUPERFAMILY SSF53155 192 270 1.41E-16 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 272 351 1.1E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 SUPERFAMILY SSF57884 8 93 7.45E-32 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Pfam PF12833 Helix-turn-helix domain 108 185 9.5E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Gene3D G3DSA:1.10.10.60 82 140 1.9E-16 T 28-03-2018 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 PIRSF PIRSF000409 1 357 5.0E-137 T 28-03-2018 IPR016221 Bifunctional regulatory protein Ada CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Gene3D G3DSA:1.10.10.60 141 187 0.002 T 28-03-2018 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Gene3D G3DSA:3.40.10.10 2 79 1.4E-26 T 28-03-2018 IPR035451 Ada-like domain CO704_RS06755 b14592426125559e544fca8d6f17459b 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 322 328 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 273 351 1.4E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS06755 b14592426125559e544fca8d6f17459b 357 Gene3D G3DSA:1.10.10.10 270 357 2.4E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 SUPERFAMILY SSF56634 29 340 1.7E-87 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 PIRSF PIRSF000296 11 343 3.2E-112 T 28-03-2018 IPR024168 Catalase, SrpA-type, predicted CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 Gene3D G3DSA:2.40.180.10 32 348 2.6E-64 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 Pfam PF00199 Catalase 57 339 9.4E-26 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 PRINTS PR00067 Catalase signature 315 341 4.1E-6 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 PRINTS PR00067 Catalase signature 54 76 4.1E-6 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 PRINTS PR00067 Catalase signature 91 109 4.1E-6 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 PRINTS PR00067 Catalase signature 112 129 4.1E-6 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS03750 784021d88e193446e38ab9d841ef6c10 352 SMART SM01060 30 352 1.3E-6 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 PIRSF PIRSF000876 1 346 9.4E-139 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 SUPERFAMILY SSF52172 1 108 1.39E-27 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 SUPERFAMILY SSF52738 156 342 1.83E-75 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 Pfam PF01339 CheB methylesterase 159 336 2.4E-63 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 Gene3D G3DSA:3.40.50.180 150 349 6.3E-81 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 Pfam PF00072 Response regulator receiver domain 6 109 9.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 Gene3D G3DSA:3.40.50.2300 1 149 6.4E-27 T 28-03-2018 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 SMART SM00448 4 119 8.4E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08760 10cf5f61332fe0f509ab62461276460a 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.611 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 SUPERFAMILY SSF51658 4 438 2.35E-174 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 3.3E-218 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.559 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 Gene3D G3DSA:3.20.20.150 2 440 7.9E-113 T 28-03-2018 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 180 201 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 207 226 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 133 153 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 271 298 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 300 311 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 333 344 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 92 114 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 156 175 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS24345 d978042f13963c3b2d9d85c03f40ff0b 440 PRINTS PR00688 Xylose isomerase signature 229 253 3.0E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CO704_RS16270 017f6e8d823b3f2c8972536322f6c50a 173 SUPERFAMILY SSF103247 43 158 2.22E-11 T 28-03-2018 IPR005180 Domain of unknown function DUF302 CO704_RS16270 017f6e8d823b3f2c8972536322f6c50a 173 Gene3D G3DSA:3.30.310.70 39 159 1.5E-17 T 28-03-2018 IPR005180 Domain of unknown function DUF302 CO704_RS07845 77c435fb8249622ebeeb81beb837d08f 86 Gene3D G3DSA:3.30.1660.10 23 86 5.7E-18 T 28-03-2018 IPR025543 Dodecin-like CO704_RS07845 77c435fb8249622ebeeb81beb837d08f 86 SUPERFAMILY SSF159871 7 86 4.19E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS07845 77c435fb8249622ebeeb81beb837d08f 86 Pfam PF07338 Protein of unknown function (DUF1471) 36 86 1.1E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 6.3E-34 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 6.3E-34 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 6.3E-34 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 6.3E-34 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 Pfam PF01311 Bacterial export proteins, family 1 14 246 2.0E-68 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS08380 65f08283e81f9f416324e6062cbca901 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 2.0E-78 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.657 T 28-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 7.5E-54 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 Gene3D G3DSA:3.40.50.150 159 343 7.1E-33 T 28-03-2018 CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 SUPERFAMILY SSF53335 152 315 3.47E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS20160 700153670f4c294eea9dff5d1f4c6e50 343 Pfam PF05175 Methyltransferase small domain 166 333 8.5E-61 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 SUPERFAMILY SSF52540 8 284 1.28E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 SUPERFAMILY SSF52540 327 546 4.15E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 Gene3D G3DSA:3.40.50.300 5 296 8.5E-55 T 28-03-2018 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 SMART SM00382 329 524 1.7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 SMART SM00382 9 172 0.86 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 9 575 2.7E-268 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 Pfam PF02374 Anion-transporting ATPase 11 293 2.3E-74 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 Pfam PF02374 Anion-transporting ATPase 333 477 3.2E-31 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 PIRSF PIRSF001327 1 589 6.8E-258 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 Gene3D G3DSA:3.40.50.300 316 586 1.1E-45 T 28-03-2018 CO704_RS09780 f3ee0eee8ca8a336c4c89b9203fa1150 589 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 14 294 5.7E-76 T 28-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CO704_RS05795 6c20c7ba0fed09f8b8b9ec1c9a9ee87d 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 2.7E-115 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CO704_RS05795 6c20c7ba0fed09f8b8b9ec1c9a9ee87d 277 SUPERFAMILY SSF161098 16 265 2.88E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05795 6c20c7ba0fed09f8b8b9ec1c9a9ee87d 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 2.4E-114 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CO704_RS05795 6c20c7ba0fed09f8b8b9ec1c9a9ee87d 277 Gene3D G3DSA:1.10.3720.10 12 275 9.7E-48 T 28-03-2018 CO704_RS05795 6c20c7ba0fed09f8b8b9ec1c9a9ee87d 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 6.7E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 Gene3D G3DSA:3.90.950.10 1 188 4.8E-70 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.018 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 SUPERFAMILY SSF52972 2 184 3.66E-63 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 5.0E-68 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 Pfam PF02545 Maf-like protein 4 184 5.7E-59 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS01450 f5f3547bf25eceeb3173f0a5993e412a 197 PIRSF PIRSF006305 1 190 2.2E-56 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 SMART SM00382 28 179 4.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 SUPERFAMILY SSF52540 8 243 9.87E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 Gene3D G3DSA:1.10.8.60 181 251 3.8E-18 T 28-03-2018 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 Pfam PF02954 Bacterial regulatory protein, Fis family 286 324 2.7E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 307 327 1.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 290 307 1.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 324 1.1E-159 T 28-03-2018 IPR014317 Transcription activator PspF CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 Gene3D G3DSA:1.10.10.60 255 330 1.8E-11 T 28-03-2018 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 SUPERFAMILY SSF46689 222 326 4.93E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 Gene3D G3DSA:3.40.50.300 1 179 1.9E-28 T 28-03-2018 CO704_RS10465 a7e2a762aa06e4c9a280c008baf6467b 332 Pfam PF00158 Sigma-54 interaction domain 8 170 8.4E-61 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 9.1E-45 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 Gene3D G3DSA:3.40.630.10 291 373 1.5E-5 T 28-03-2018 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 SUPERFAMILY SSF55031 179 286 2.84E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 Gene3D G3DSA:3.40.630.10 1 280 7.9E-62 T 28-03-2018 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 2.7E-175 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.44 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 Pfam PF07687 Peptidase dimerisation domain 175 279 9.7E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 SUPERFAMILY SSF53187 292 373 1.28E-64 T 28-03-2018 CO704_RS05685 23fa386bd00b95bf0f61a943e6ae8691 375 SUPERFAMILY SSF53187 5 178 1.28E-64 T 28-03-2018 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 SUPERFAMILY SSF52540 201 272 8.28E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 SUPERFAMILY SSF52540 299 453 8.28E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 7.2E-35 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 3.5E-111 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 Gene3D G3DSA:3.40.50.300 184 468 3.9E-64 T 28-03-2018 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 SUPERFAMILY SSF48024 22 133 7.85E-37 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 SMART SM00382 220 426 8.2E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 2.8E-174 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CO704_RS22615 68c91d7071fc4ccc3eb3250226dfb8b8 468 Gene3D G3DSA:1.10.860.10 14 166 4.7E-46 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CO704_RS22335 1253f0504c0e377df85c946c484cd0ab 153 Pfam PF06754 Phosphonate metabolism protein PhnG 10 150 1.3E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22335 1253f0504c0e377df85c946c484cd0ab 153 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 9 151 6.4E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.334 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 298 6.4E-33 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Gene3D G3DSA:3.40.190.10 129 223 4.6E-23 T 28-03-2018 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 SUPERFAMILY SSF53850 6 224 2.51E-70 T 28-03-2018 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.5E-48 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Gene3D G3DSA:3.40.190.10 1 128 1.2E-36 T 28-03-2018 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Gene3D G3DSA:3.30.70.120 227 298 3.0E-25 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 6.1E-58 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CO704_RS07700 ca0cfca5cc54b7516f5b63ef8ad29469 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.5E-24 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CO704_RS14455 5ff3a40f071d0dbaefae24c9e60e742d 451 SUPERFAMILY SSF51905 162 332 5.31E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14455 5ff3a40f071d0dbaefae24c9e60e742d 451 Gene3D G3DSA:3.50.50.60 194 451 1.0E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14455 5ff3a40f071d0dbaefae24c9e60e742d 451 SUPERFAMILY SSF51905 1 221 3.89E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14455 5ff3a40f071d0dbaefae24c9e60e742d 451 Gene3D G3DSA:3.50.50.60 1 193 2.5E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14455 5ff3a40f071d0dbaefae24c9e60e742d 451 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 333 8.6E-114 T 28-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 Gene3D G3DSA:1.10.10.10 2 100 1.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 SMART SM00418 16 92 1.1E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 SUPERFAMILY SSF46785 3 92 5.69E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 Pfam PF12840 Helix-turn-helix domain 16 72 1.8E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 2.7E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 2.7E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS07755 b6561223da8e0641ec8c2c15f2fb2e73 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 2.7E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 1.5E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 1.5E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 1.5E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.1E-82 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 Gene3D G3DSA:3.40.710.10 18 310 3.2E-43 T 28-03-2018 CO704_RS16300 2d6872a44eefe5e5c6e6450828b74f9c 313 SUPERFAMILY SSF56601 4 279 1.65E-60 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS22480 70c026a3aad146a2d8800b441e64fecd 229 Pfam PF04172 LrgB-like family 14 225 2.8E-68 T 28-03-2018 IPR007300 CidB/LrgB family CO704_RS11365 594f62ff21a500b3327a34593a703778 266 SUPERFAMILY SSF55781 75 254 1.05E-43 T 28-03-2018 IPR029016 GAF domain-like CO704_RS11365 594f62ff21a500b3327a34593a703778 266 SUPERFAMILY SSF46785 14 82 9.28E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11365 594f62ff21a500b3327a34593a703778 266 SMART SM00346 12 100 5.4E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS11365 594f62ff21a500b3327a34593a703778 266 Pfam PF01614 Bacterial transcriptional regulator 128 252 1.4E-34 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CO704_RS11365 594f62ff21a500b3327a34593a703778 266 Gene3D G3DSA:1.10.10.10 6 81 1.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11365 594f62ff21a500b3327a34593a703778 266 Gene3D G3DSA:3.30.450.40 82 257 1.0E-44 T 28-03-2018 IPR029016 GAF domain-like CO704_RS11365 594f62ff21a500b3327a34593a703778 266 Pfam PF09339 IclR helix-turn-helix domain 15 61 8.4E-9 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 Gene3D G3DSA:3.40.50.2300 1 127 2.4E-38 T 28-03-2018 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 SUPERFAMILY SSF52172 4 129 1.01E-40 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 SMART SM00448 5 116 1.4E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 Gene3D G3DSA:1.10.10.10 128 237 2.2E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 SMART SM00862 155 231 9.5E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 Pfam PF00072 Response regulator receiver domain 7 116 1.9E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 1.2E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS03045 01cef860a70c72d09f08fc9fb9bf4a66 237 SUPERFAMILY SSF46894 131 232 1.44E-30 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS14705 a690e0c158d7338fdcd7e2a371641f07 196 SUPERFAMILY SSF55729 12 185 4.66E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS14705 a690e0c158d7338fdcd7e2a371641f07 196 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.1E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS14705 a690e0c158d7338fdcd7e2a371641f07 196 Gene3D G3DSA:3.40.630.30 9 192 1.5E-30 T 28-03-2018 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 Gene3D G3DSA:2.20.150.10 12 46 1.2E-10 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 4.7E-102 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 2.7E-99 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 SUPERFAMILY SSF53613 7 291 5.61E-69 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 3.7E-66 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 PIRSF PIRSF000535 2 311 3.2E-118 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CO704_RS06920 55d9387a11623ea403e0bae92577e510 312 Gene3D G3DSA:3.40.1190.20 47 312 2.9E-53 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 1.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 Gene3D G3DSA:3.40.190.10 185 277 1.8E-19 T 28-03-2018 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 SUPERFAMILY SSF53850 99 309 1.16E-32 T 28-03-2018 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 SUPERFAMILY SSF46785 17 123 1.21E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 Gene3D G3DSA:1.10.10.10 2 100 2.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 Pfam PF03466 LysR substrate binding domain 99 305 1.7E-29 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 305 1.6E-166 T 28-03-2018 IPR011781 D-serine deaminase transcriptional activator CO704_RS24845 2ac52607e33b5a94f13b1fe4c8753013 311 Gene3D G3DSA:3.40.190.10 103 184 1.7E-11 T 28-03-2018 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 6.4E-28 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 SUPERFAMILY SSF50249 1 65 4.16E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 2.3E-41 T 28-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 SMART SM00357 3 67 2.4E-26 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 Gene3D G3DSA:2.40.50.140 1 66 6.9E-26 T 28-03-2018 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 PIRSF PIRSF002599 1 73 6.5E-23 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS15720 bff933a374dcf35b852878a6b1a74fe4 73 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-15 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS24045 b71668553904b5d210ea462921d5d732 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 5.1E-52 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS24045 b71668553904b5d210ea462921d5d732 321 Gene3D G3DSA:1.10.3470.10 34 320 8.1E-38 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Pfam PF01556 DnaJ C terminal domain 120 276 7.4E-32 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Gene3D G3DSA:2.60.260.20 204 282 4.8E-18 T 28-03-2018 CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 PRINTS PR00625 DnaJ domain signature 41 61 2.5E-17 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 PRINTS PR00625 DnaJ domain signature 25 40 2.5E-17 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 PRINTS PR00625 DnaJ domain signature 7 25 2.5E-17 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 PRINTS PR00625 DnaJ domain signature 61 80 2.5E-17 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Gene3D G3DSA:2.60.260.20 115 199 1.1E-15 T 28-03-2018 CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 SUPERFAMILY SSF46565 1 103 5.23E-27 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Pfam PF00226 DnaJ domain 5 66 3.9E-23 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Gene3D G3DSA:1.20.5.460 283 304 1.0E-14 T 28-03-2018 CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 SUPERFAMILY SSF49493 115 208 1.31E-14 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Gene3D G3DSA:1.10.287.110 1 114 3.1E-32 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 54.191 T 28-03-2018 IPR023859 DNA-binding protein, curved-DNA CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 SMART SM00271 4 61 5.1E-25 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 SUPERFAMILY SSF49493 204 283 1.83E-15 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CO704_RS04090 1df9764084bc375f63cec62116fa4ec5 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.3E-155 T 28-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 SMART SM00487 150 339 6.5E-20 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 SUPERFAMILY SSF52540 125 369 1.17E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.09 T 28-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Gene3D G3DSA:3.40.50.300 484 959 3.8E-22 T 28-03-2018 CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Gene3D G3DSA:3.40.50.10810 123 359 4.5E-28 T 28-03-2018 CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Pfam PF00176 SNF2 family N-terminal domain 174 442 8.7E-20 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 SUPERFAMILY SSF52540 480 644 2.6E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 SUPERFAMILY SSF52540 273 337 2.6E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 Pfam PF00271 Helicase conserved C-terminal domain 495 601 9.0E-15 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS19770 31bbd5bbd15c9533f39c04b22e3af8b3 968 SMART SM00490 517 601 6.1E-18 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 SUPERFAMILY SSF53244 312 447 2.49E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.1E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Gene3D G3DSA:3.40.1190.10 91 312 5.1E-38 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Pfam PF08245 Mur ligase middle domain 108 291 1.5E-17 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.283 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Gene3D G3DSA:3.90.190.20 313 451 9.0E-27 T 28-03-2018 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 SUPERFAMILY SSF51984 1 90 2.62E-24 T 28-03-2018 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Gene3D G3DSA:3.40.50.720 1 90 2.5E-13 T 28-03-2018 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 1.1E-8 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 SUPERFAMILY SSF53623 95 308 1.24E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS20720 82b512640aae8dad069927cf1f31d9ca 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 6.6E-269 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Gene3D G3DSA:1.10.287.1060 234 326 0.015 T 28-03-2018 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 1.2E-59 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 SUPERFAMILY SSF47170 25 179 5.62E-42 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Pfam PF00672 HAMP domain 217 263 1.1E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Gene3D G3DSA:1.10.287.950 327 519 6.1E-49 T 28-03-2018 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 SMART SM00283 268 515 2.3E-97 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 8.1E-88 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Gene3D G3DSA:1.20.120.30 23 189 1.6E-37 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 SUPERFAMILY SSF58104 235 516 1.57E-75 T 28-03-2018 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 SMART SM00319 44 181 5.7E-31 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 Pfam PF02203 Tar ligand binding domain homologue 1 174 7.2E-48 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS08745 70d00122a3c2a74fcafc8486e1a0f519 555 SMART SM00304 215 267 1.1E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS08410 bb7227b19c812ff103203117e25ba130 155 Pfam PF03748 Flagellar basal body-associated protein FliL 57 153 2.4E-19 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 SUPERFAMILY SSF50447 568 649 3.12E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 SUPERFAMILY SSF50447 796 892 1.62E-33 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:3.30.56.50 321 362 2.0E-9 T 28-03-2018 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:3.30.56.50 4 45 7.1E-11 T 28-03-2018 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 892 17.628 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:2.40.30.10 795 893 6.2E-30 T 28-03-2018 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:3.40.50.300 390 567 5.2E-39 T 28-03-2018 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 369 2.1E-14 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 6.7E-9 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 SUPERFAMILY SSF52156 672 801 4.71E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 311 894 2.4E-295 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 SUPERFAMILY SSF46955 3 50 1.45E-12 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 SUPERFAMILY SSF52540 394 562 1.1E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 ProSitePatterns PS01176 Initiation factor 2 signature. 845 867 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 397 553 6.9E-34 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 5.2E-16 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Pfam PF11987 Translation-initiation factor 2 679 784 5.1E-36 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:3.40.50.10050 698 773 7.4E-25 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Gene3D G3DSA:2.40.30.10 568 697 1.3E-29 T 28-03-2018 CO704_RS01805 101eca479c6fc27d56a129bc0ea1d422 895 Pfam PF00009 Elongation factor Tu GTP binding domain 398 555 6.0E-35 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS12840 f42ab110bb2db0357f15d45ec48bcc46 366 Pfam PF05145 Transition state regulatory protein AbrB 45 354 4.9E-85 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CO704_RS12840 f42ab110bb2db0357f15d45ec48bcc46 366 PIRSF PIRSF038991 13 364 1.7E-69 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CO704_RS12840 f42ab110bb2db0357f15d45ec48bcc46 366 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 23 175 4.5E-38 T 28-03-2018 IPR017516 AbrB duplication CO704_RS12840 f42ab110bb2db0357f15d45ec48bcc46 366 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 200 353 1.4E-39 T 28-03-2018 IPR017516 AbrB duplication CO704_RS10985 51c6f875b8e62f0c1429a63b2eb23b6e 195 Gene3D G3DSA:3.90.550.10 1 193 5.6E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS10985 51c6f875b8e62f0c1429a63b2eb23b6e 195 SUPERFAMILY SSF53448 1 187 2.01E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS10985 51c6f875b8e62f0c1429a63b2eb23b6e 195 Pfam PF12804 MobA-like NTP transferase domain 7 159 5.4E-27 T 28-03-2018 IPR025877 MobA-like NTP transferase CO704_RS00085 91d6af347651026fb97e805c18829abb 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 279 8.1E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS00085 91d6af347651026fb97e805c18829abb 393 Gene3D G3DSA:1.20.1600.10 27 327 1.2E-31 T 28-03-2018 CO704_RS00085 91d6af347651026fb97e805c18829abb 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 58 389 2.2E-43 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS00085 91d6af347651026fb97e805c18829abb 393 SUPERFAMILY SSF111369 65 268 3.53E-27 T 28-03-2018 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 64.116 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 SUPERFAMILY SSF88946 5 88 3.61E-23 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Gene3D G3DSA:1.10.10.10 145 239 9.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 SUPERFAMILY SSF88659 157 237 2.06E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Pfam PF04542 Sigma-70 region 2 16 88 1.9E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Gene3D G3DSA:1.10.10.10 89 136 2.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Gene3D G3DSA:1.10.1740.10 2 86 6.5E-22 T 28-03-2018 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PIRSF PIRSF000770 1 238 3.8E-40 T 28-03-2018 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Pfam PF04545 Sigma-70, region 4 185 233 2.8E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 SUPERFAMILY SSF88659 89 156 1.05E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 Pfam PF04539 Sigma-70 region 3 98 166 4.0E-19 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 5.0E-33 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 6.2E-87 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS08520 a287edb8bc5f9804f94011af35aae4bd 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.40.190.10 161 233 0.011 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF47384 580 664 2.55E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF55874 653 827 1.7E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF53850 49 274 9.31E-27 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SMART SM00448 847 959 2.6E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:1.20.120.160 978 1089 1.6E-12 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 711 824 1.4E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SMART SM00062 56 278 3.5E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SMART SM00062 302 521 8.1E-26 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SMART SM00387 710 825 6.9E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF01627 Hpt domain 998 1068 2.1E-8 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SMART SM00388 597 663 4.6E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF00512 His Kinase A (phospho-acceptor) domain 597 663 5.7E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.40.50.2300 833 977 4.1E-38 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF53850 296 518 6.38E-34 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.40.190.10 39 160 2.0E-11 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:1.10.287.130 588 659 3.4E-15 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.40.190.10 442 522 1.9E-4 T 28-03-2018 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.30.565.10 668 832 1.2E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF47226 942 1065 6.02E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 PRINTS PR00344 Bacterial sensor protein C-terminal signature 785 803 1.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 PRINTS PR00344 Bacterial sensor protein C-terminal signature 752 766 1.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 PRINTS PR00344 Bacterial sensor protein C-terminal signature 809 822 1.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 PRINTS PR00344 Bacterial sensor protein C-terminal signature 770 780 1.8E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF00072 Response regulator receiver domain 849 959 1.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 SUPERFAMILY SSF52172 846 970 6.26E-35 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 59 263 1.1E-17 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 303 517 3.2E-25 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13000 ffee0e429769bec40cb8ff928756f6a8 1095 Gene3D G3DSA:3.40.190.10 292 441 5.4E-18 T 28-03-2018 CO704_RS14020 4c9f43dbbcf3dde0f05cc076054657c9 183 SUPERFAMILY SSF55469 1 168 2.75E-39 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS14020 4c9f43dbbcf3dde0f05cc076054657c9 183 Pfam PF00881 Nitroreductase family 9 161 1.4E-23 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CO704_RS14020 4c9f43dbbcf3dde0f05cc076054657c9 183 PIRSF PIRSF000232 1 182 1.2E-67 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CO704_RS14020 4c9f43dbbcf3dde0f05cc076054657c9 183 Gene3D G3DSA:3.40.109.10 1 181 4.5E-33 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 SUPERFAMILY SSF46689 197 247 1.72E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 SUPERFAMILY SSF51182 28 89 3.56E-5 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 Pfam PF12852 Cupin 2 182 6.9E-37 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 3.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 3.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 SMART SM00342 213 296 1.4E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 Gene3D G3DSA:2.60.120.280 14 178 1.2E-16 T 28-03-2018 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 Gene3D G3DSA:1.10.10.60 253 298 3.7E-13 T 28-03-2018 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 Gene3D G3DSA:1.10.10.60 179 252 2.3E-11 T 28-03-2018 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 SUPERFAMILY SSF46689 249 297 2.24E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12125 80cb4f84a581f018e3b4795f66b21562 298 Pfam PF12833 Helix-turn-helix domain 219 297 7.4E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS01545 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CO704_RS01545 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CO704_RS01545 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CO704_RS01545 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS01545 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 3 130 1.2E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 48 571 5.8E-222 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 291 310 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 480 497 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 433 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 391 409 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 261 277 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 471 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 70 95 1.3E-80 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 Pfam PF01019 Gamma-glutamyltranspeptidase 63 572 6.8E-188 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 391 415 - T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS00600 9107f3ea155e3a8fd8801393e4f1e482 580 SUPERFAMILY SSF56235 40 572 5.02E-197 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS07540 a9785f7874ddce2b296578031ecda363 396 SUPERFAMILY SSF51735 34 278 2.05E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07540 a9785f7874ddce2b296578031ecda363 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 333 6.0E-46 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CO704_RS07540 a9785f7874ddce2b296578031ecda363 396 Gene3D G3DSA:3.40.50.720 30 381 4.0E-38 T 28-03-2018 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 SUPERFAMILY SSF75615 114 200 6.54E-26 T 28-03-2018 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Gene3D G3DSA:3.40.1010.10 215 340 1.6E-34 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Gene3D G3DSA:1.10.8.210 151 209 5.9E-18 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Pfam PF13241 Putative NAD(P)-binding 6 115 2.0E-26 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Gene3D G3DSA:3.30.950.10 341 457 1.3E-38 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 SUPERFAMILY SSF53790 215 456 1.2E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Gene3D G3DSA:3.30.160.110 121 148 2.0E-16 T 28-03-2018 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 5.4E-91 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Gene3D G3DSA:3.40.50.720 3 120 4.5E-19 T 28-03-2018 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 3.1E-49 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 4.7E-69 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.5E-17 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 6.6E-9 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 PIRSF PIRSF036426 1 457 5.2E-201 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.691 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CO704_RS00910 904c5c780c2389b0c5e31bd08898998a 457 SUPERFAMILY SSF51735 2 112 6.9E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.576 T 28-03-2018 IPR023017 Transport protein YbjL, putative CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Pfam PF06826 Predicted Permease Membrane Region 17 182 2.2E-40 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Pfam PF06826 Predicted Permease Membrane Region 385 554 6.0E-42 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Gene3D G3DSA:3.30.70.1450 215 291 1.6E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 SUPERFAMILY SSF116726 291 374 2.88E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Gene3D G3DSA:3.30.70.1450 295 375 4.3E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Pfam PF02080 TrkA-C domain 227 281 7.4E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 Pfam PF02080 TrkA-C domain 305 372 1.4E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.5E-37 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 4.2E-44 T 28-03-2018 IPR006512 YidE/YbjL duplication CO704_RS15910 9328363d8215e18490f6577bd0d8cd1d 560 SUPERFAMILY SSF116726 227 282 2.09E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS19055 36aee844687f1db31a2d425b5a746187 497 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 31 465 5.1E-84 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SMART SM00889 485 604 1.1E-73 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SUPERFAMILY SSF54211 484 605 1.42E-44 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SUPERFAMILY SSF50447 271 409 1.08E-37 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.5E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Gene3D G3DSA:3.30.230.10 499 619 2.5E-43 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Gene3D G3DSA:3.40.50.300 5 293 4.0E-54 T 28-03-2018 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Gene3D G3DSA:3.30.70.240 620 697 1.6E-31 T 28-03-2018 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Gene3D G3DSA:2.40.30.10 294 406 1.2E-33 T 28-03-2018 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 108.935 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SMART SM00838 606 693 1.2E-54 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SUPERFAMILY SSF54980 407 485 2.77E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 697 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SUPERFAMILY SSF52540 6 288 1.74E-105 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Pfam PF00679 Elongation factor G C-terminus 606 692 4.4E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Gene3D G3DSA:3.30.70.870 407 498 2.7E-38 T 28-03-2018 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Pfam PF14492 Elongation Factor G, domain II 409 482 6.9E-36 T 28-03-2018 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 SUPERFAMILY SSF54980 609 696 9.11E-30 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Pfam PF03764 Elongation factor G, domain IV 484 604 5.6E-49 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS07760 9554a2aaf54a0d8c9e87b0257880b7df 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 7.4E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 Gene3D G3DSA:1.20.1250.20 18 225 1.6E-32 T 28-03-2018 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 3.6E-163 T 28-03-2018 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 Pfam PF07690 Major Facilitator Superfamily 34 400 1.5E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 SUPERFAMILY SSF103473 13 442 2.09E-85 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 Gene3D G3DSA:1.20.1250.20 240 449 2.0E-32 T 28-03-2018 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 PIRSF PIRSF002808 5 449 3.7E-172 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CO704_RS06690 0d0aefdc804d645946aba30b1c41b80a 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 2.8E-260 T 28-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Gene3D G3DSA:3.30.230.10 217 391 4.4E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 SUPERFAMILY SSF55874 5 215 5.59E-69 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Gene3D G3DSA:3.40.50.670 396 627 2.2E-78 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.009 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 SMART SM00433 34 624 4.4E-212 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 9.6E-156 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Pfam PF00204 DNA gyrase B 218 384 9.7E-40 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Pfam PF01751 Toprim domain 413 522 4.2E-12 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Gene3D G3DSA:3.30.565.10 17 216 5.0E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 SUPERFAMILY SSF56719 388 621 1.86E-77 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 8.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 SUPERFAMILY SSF54211 217 382 8.16E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.9E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 6.2E-24 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 SMART SM00387 27 173 1.7E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02465 cbf84cdaa9661ac1e716fad7d2161d4a 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Gene3D G3DSA:3.90.190.20 312 452 3.1E-40 T 28-03-2018 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Gene3D G3DSA:3.40.1190.10 90 309 1.2E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Pfam PF08245 Mur ligase middle domain 106 293 1.7E-48 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 1.7E-140 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 391 2.4E-15 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 SUPERFAMILY SSF53623 101 310 1.83E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Gene3D G3DSA:3.40.1390.10 1 89 1.1E-26 T 28-03-2018 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 SUPERFAMILY SSF53244 313 446 1.65E-37 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 SUPERFAMILY SSF63418 1 97 1.83E-26 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.309 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19660 7cc669d054de3534996628b42367b8de 452 Pfam PF01225 Mur ligase family, catalytic domain 27 79 9.4E-8 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1148 1239 2.55E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 861 951 1.0E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2197 2293 4.91E-15 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1285 1381 5.7E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 3020 3116 1.0E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2633 2729 3.1E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1189 1284 1.2E-14 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 901 996 3.8E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2828 2922 3.0E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1093 1188 1.7E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1958 2052 5.1E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2053 2149 2.5E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2247 2341 3.6E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2342 2439 3.4E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2536 2632 1.8E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 3117 3213 2.6E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 699 801 6.4E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1478 1574 1.5E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2730 2827 5.1E-19 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 3214 3310 7.3E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1382 1477 3.5E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1670 1765 2.6E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1575 1669 3.2E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2150 2246 3.1E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2923 3019 3.1E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1766 1861 4.9E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 2440 2535 1.5E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 595 698 1.2E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 329 495 1.5E-12 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 3311 3421 2.1E-10 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 496 594 1.6E-11 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 802 900 3.8E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 997 1092 3.2E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Gene3D G3DSA:2.60.120.260 1862 1957 4.7E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2293 2385 5.89E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF09134 Invasin, domain 3 756 855 4.9E-21 T 28-03-2018 IPR015217 Invasin, domain 3 CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF09134 Invasin, domain 3 655 751 1.8E-20 T 28-03-2018 IPR015217 Invasin, domain 3 CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF09134 Invasin, domain 3 548 649 2.1E-16 T 28-03-2018 IPR015217 Invasin, domain 3 CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2487 2579 3.73E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1725 1816 1.0E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2390 2482 3.34E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1629 1720 1.33E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 547 644 2.04E-11 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1052 1143 1.43E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 653 750 7.46E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2584 2676 7.46E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1533 1624 4.71E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 757 852 5.49E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2681 2774 4.51E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 455 544 4.71E-15 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 3165 3257 5.89E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1429 1523 2.35E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2689 2776 2.9E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2013 2100 5.2E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 451 541 3.6E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2495 2582 7.1E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2786 2872 4.1E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1917 2004 2.2E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1244 1331 2.6E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1340 1427 1.3E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 3367 3464 0.034 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1148 1235 2.8E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 3076 3163 7.1E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2109 2196 3.8E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2301 2388 7.1E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1533 1620 2.2E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 956 1043 1.9E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 656 746 1.7E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2592 2679 2.0E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1821 1908 5.2E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 758 848 2.8E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 860 947 3.2E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2882 2969 7.1E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2979 3066 4.8E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 3173 3260 1.5E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2205 2291 3.5E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1052 1139 1.9E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 2398 2485 4.8E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1629 1716 2.8E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1725 1812 3.8E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 1437 1524 5.8E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 550 642 0.35 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SMART SM00634 3270 3357 9.8E-14 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 956 1047 1.43E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1244 1335 2.75E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 3068 3160 3.73E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2778 2874 4.71E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF11924 Inverse autotransporter, beta-domain 56 324 8.4E-105 T 28-03-2018 IPR024519 Inverse autotransporter, beta-domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2013 2104 1.2E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 3262 3356 7.06E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1917 2008 4.71E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2874 2966 5.49E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1054 1137 2.7E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2687 2772 3.7E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2979 3059 1.1E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2495 2575 4.4E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1536 1618 1.2E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 3268 3352 1.6E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2398 2478 1.1E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 3173 3252 2.4E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1728 1810 1.3E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2882 2962 4.4E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1437 1522 7.1E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1342 1420 6.1E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 461 538 2.4E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2594 2672 2.7E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1632 1714 5.4E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 863 945 4.3E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1920 2002 1.2E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1150 1234 9.9E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 1245 1329 6.2E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2112 2194 1.3E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 2301 2381 4.4E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 3076 3156 4.4E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 Pfam PF02369 Bacterial Ig-like domain (group 1) 958 1041 2.7E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 3386 3466 7.59E-10 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2971 3063 3.34E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 2109 2200 1.0E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1821 1912 1.2E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS21550 3f0b68b05cc6a8c2980ec6703e0418bc 3591 SUPERFAMILY SSF49373 1332 1424 5.69E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 SUPERFAMILY SSF51366 2 214 3.49E-58 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 Gene3D G3DSA:3.20.20.70 1 218 6.4E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 8.5E-63 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 209 1.0E-64 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS22415 f8bb9ed0e92be287d79ad1421dbf2f3b 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS02590 f4f9c39ddef17e53c899ac390c03125f 165 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 165 89.78 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CO704_RS02590 f4f9c39ddef17e53c899ac390c03125f 165 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 5.7E-76 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CO704_RS02590 f4f9c39ddef17e53c899ac390c03125f 165 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.3E-33 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 Gene3D G3DSA:1.10.3410.10 263 390 1.2E-22 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 Gene3D G3DSA:1.10.3210.10 3 262 1.3E-54 T 28-03-2018 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.332 T 28-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 Pfam PF13286 Phosphohydrolase-associated domain 477 499 3.0E-5 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 SMART SM00471 62 282 1.0E-12 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 Pfam PF01966 HD domain 66 139 2.9E-10 T 28-03-2018 IPR006674 HD domain CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 SUPERFAMILY SSF109604 251 432 4.0E-67 T 28-03-2018 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 SUPERFAMILY SSF109604 31 134 4.0E-67 T 28-03-2018 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 SUPERFAMILY SSF109604 182 215 4.0E-67 T 28-03-2018 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 SUPERFAMILY SSF109604 483 501 4.0E-67 T 28-03-2018 CO704_RS19340 a412c9e4d5f4f9d994f10753936e58a1 504 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 1.3E-136 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 PRINTS PR00721 Stomatin signature 147 168 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 PRINTS PR00721 Stomatin signature 182 199 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 PRINTS PR00721 Stomatin signature 100 122 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 Pfam PF12221 Bacterial membrane protein N terminal 1 57 5.1E-15 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 SMART SM00244 93 253 1.5E-42 T 28-03-2018 IPR001107 Band 7 domain CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 SUPERFAMILY SSF117892 126 257 1.15E-20 T 28-03-2018 IPR001107 Band 7 domain CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 TIGRFAM TIGR01933 hflK: HflK protein 95 354 6.7E-124 T 28-03-2018 IPR010201 HflK GO:0016021 CO704_RS20960 b220325cd83d0106a81fe02d72cdf798 419 Pfam PF01145 SPFH domain / Band 7 family 97 268 4.1E-31 T 28-03-2018 IPR001107 Band 7 domain CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 SUPERFAMILY SSF55545 30 161 2.62E-25 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 29 158 7.5E-16 T 28-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 Gene3D G3DSA:3.20.20.80 160 624 1.2E-128 T 28-03-2018 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 SUPERFAMILY SSF51445 162 419 1.99E-108 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 SUPERFAMILY SSF51445 523 600 1.99E-108 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 552 568 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 121 141 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 185 206 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 156 173 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 237 254 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 586 4.6E-45 T 28-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 Gene3D G3DSA:3.30.379.10 15 158 6.4E-28 T 28-03-2018 CO704_RS01945 94f66a3f599b8254c4f7b9a488ef42f1 796 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 162 587 3.4E-100 T 28-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CO704_RS06280 55ed57a7f5c2df41102336b498ba3293 183 SMART SM00463 95 173 5.3E-21 T 28-03-2018 IPR002625 Smr domain CO704_RS06280 55ed57a7f5c2df41102336b498ba3293 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 41.612 T 28-03-2018 IPR022990 Uncharacterised protein family UPF0115 CO704_RS06280 55ed57a7f5c2df41102336b498ba3293 183 SUPERFAMILY SSF160443 96 170 1.31E-9 T 28-03-2018 IPR002625 Smr domain CO704_RS06280 55ed57a7f5c2df41102336b498ba3293 183 Pfam PF01713 Smr domain 98 172 2.7E-17 T 28-03-2018 IPR002625 Smr domain CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 SUPERFAMILY SSF56601 235 563 1.61E-87 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 Gene3D G3DSA:3.40.710.10 236 587 1.1E-79 T 28-03-2018 CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 SUPERFAMILY SSF56519 63 233 5.62E-45 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 Gene3D G3DSA:3.90.1310.10 36 235 1.5E-43 T 28-03-2018 CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 1.1E-83 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS19670 fce5efa6ca4973261603e3cb771f607e 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 6.0E-19 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 Pfam PF01497 Periplasmic binding protein 40 269 6.5E-31 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 Gene3D G3DSA:3.40.50.1980 30 138 1.0E-14 T 28-03-2018 CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 88 103 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 57 75 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 187 202 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 211 229 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 276 289 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 239 256 7.8E-39 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 SUPERFAMILY SSF53807 37 294 9.03E-55 T 28-03-2018 CO704_RS19380 21c44b4c4b98388a50bc3cbe8de29d7d 299 Gene3D G3DSA:3.40.50.1980 139 298 1.4E-25 T 28-03-2018 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SUPERFAMILY SSF50249 560 642 2.0E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SMART SM00357 23 79 1.1E-13 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SMART SM00955 189 517 3.5E-124 T 28-03-2018 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SUPERFAMILY SSF50249 177 555 1.11E-112 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Gene3D G3DSA:2.40.50.140 22 75 0.16 T 28-03-2018 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.4E-18 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Pfam PF00575 S1 RNA binding domain 559 636 2.6E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SUPERFAMILY SSF50249 83 171 1.03E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Pfam PF00773 RNB domain 189 516 4.6E-84 T 28-03-2018 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 2.3E-237 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 SUPERFAMILY SSF50249 8 80 2.35E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 44.917 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CO704_RS10425 70d94ebef2e14c6ac0c59fb88fc13d1e 644 Gene3D G3DSA:2.40.50.140 558 644 8.7E-7 T 28-03-2018 CO704_RS08165 070cbf2367a08f6cc4371ecac745feb1 504 Pfam PF03389 MobA/MobL family 17 196 5.5E-54 T 28-03-2018 IPR005053 MobA/MobL protein CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 SMART SM00079 50 270 2.0E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 Gene3D G3DSA:3.40.190.10 40 149 9.1E-37 T 28-03-2018 CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 SUPERFAMILY SSF53850 22 271 1.3E-70 T 28-03-2018 CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 269 9.4E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 SMART SM00062 50 271 4.3E-73 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 74 87 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS14140 74eeb2756dd24b51c1224052beabf625 285 Gene3D G3DSA:3.40.190.10 150 233 5.5E-16 T 28-03-2018 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 SMART SM01134 67 227 1.7E-55 T 28-03-2018 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 Pfam PF08220 DeoR-like helix-turn-helix domain 4 58 2.4E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 Pfam PF00455 DeoR C terminal sensor domain 69 225 2.0E-44 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 SMART SM00420 4 56 2.9E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 Gene3D G3DSA:3.40.50.1360 59 239 1.5E-32 T 28-03-2018 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 Gene3D G3DSA:1.10.10.10 1 55 2.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 SUPERFAMILY SSF46785 1 60 2.01E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 SUPERFAMILY SSF100950 67 227 3.63E-28 T 28-03-2018 CO704_RS10380 88d18ebac93cb37c8109f3e0a9834246 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 SUPERFAMILY SSF52540 4 235 3.47E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 SUPERFAMILY SSF52540 263 503 8.05E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 SMART SM00382 288 491 0.067 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 SMART SM00382 30 212 1.1E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 Gene3D G3DSA:3.40.50.300 2 253 2.3E-52 T 28-03-2018 CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 Gene3D G3DSA:3.40.50.300 254 502 4.5E-41 T 28-03-2018 CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 Pfam PF00005 ABC transporter 279 437 1.2E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22405 01bdce88ca009a6c63b82c3a36755e96 510 Pfam PF00005 ABC transporter 21 174 9.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22570 49ad0556107fa46c3939f4fdbcd2e005 311 SUPERFAMILY SSF51735 10 280 6.61E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22570 49ad0556107fa46c3939f4fdbcd2e005 311 Pfam PF05368 NmrA-like family 18 246 5.9E-18 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 CO704_RS22570 49ad0556107fa46c3939f4fdbcd2e005 311 Gene3D G3DSA:3.40.50.720 2 122 5.7E-8 T 28-03-2018 CO704_RS22570 49ad0556107fa46c3939f4fdbcd2e005 311 Gene3D G3DSA:3.90.25.10 162 294 5.4E-13 T 28-03-2018 CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 SMART SM00479 7 184 2.2E-50 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 Pfam PF00929 Exonuclease 9 175 1.2E-40 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 SUPERFAMILY SSF53098 5 185 2.16E-53 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 Gene3D G3DSA:3.30.420.10 3 191 5.1E-41 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 7.5E-95 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19070 063b976f6c1517b0c6f68333543176f0 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 1.0E-94 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Gene3D G3DSA:3.40.50.620 222 400 8.1E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 SUPERFAMILY SSF52402 197 420 8.82E-59 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 2.4E-83 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 SUPERFAMILY SSF52317 5 204 1.22E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Pfam PF02540 NAD synthase 221 256 1.2E-6 T 28-03-2018 IPR022310 NAD/GMP synthase CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 3.7E-41 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 2.6E-155 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Gene3D G3DSA:3.30.300.10 401 525 4.8E-53 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Gene3D G3DSA:3.40.50.880 5 221 1.4E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 28-03-2018 CO704_RS05040 63b64c454059a806c2b02635b34eff11 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.342 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SUPERFAMILY SSF117023 447 575 1.7E-38 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SUPERFAMILY SSF57783 4 100 6.12E-36 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Hamap MF_00974 DNA primase [dnaG]. 4 580 30.193 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Gene3D G3DSA:3.90.580.10 1 102 8.6E-35 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.6E-149 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 4.6E-12 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Pfam PF01807 CHC2 zinc finger 7 100 4.6E-41 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Pfam PF13155 Toprim-like 263 348 5.7E-14 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Gene3D G3DSA:3.90.980.10 109 240 9.5E-46 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Gene3D G3DSA:3.40.1360.10 241 367 5.4E-32 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SMART SM00400 36 90 1.2E-37 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SMART SM00766 450 575 2.1E-42 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Gene3D G3DSA:1.10.860.10 434 581 1.6E-37 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 572 2.5E-32 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SMART SM00493 259 330 9.7E-19 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Gene3D G3DSA:1.20.50.20 368 417 1.6E-20 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 SUPERFAMILY SSF56731 115 428 3.27E-114 T 28-03-2018 CO704_RS20325 071f61c60532c0578fd0c8b85307fe5f 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 5.4E-43 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.7E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 2.7E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.7E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.7E-23 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 Gene3D G3DSA:1.10.10.10 6 109 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 Pfam PF01022 Bacterial regulatory protein, arsR family 16 61 2.3E-14 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 SUPERFAMILY SSF46785 3 102 2.41E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09760 ea1582b15b71e673b33f88620e4524dd 113 SMART SM00418 8 86 4.5E-30 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS02880 f65a3d3ace80c44c24491e54b0bf9128 285 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 20 285 5.6E-86 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Gene3D G3DSA:1.10.8.60 766 857 2.4E-23 T 28-03-2018 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Gene3D G3DSA:1.10.1780.10 1 151 1.2E-33 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SUPERFAMILY SSF52540 546 853 7.32E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Gene3D G3DSA:3.40.50.300 157 342 3.3E-25 T 28-03-2018 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SUPERFAMILY SSF52540 159 545 6.48E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SMART SM01086 766 855 3.4E-37 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Gene3D G3DSA:3.40.50.300 552 765 1.3E-54 T 28-03-2018 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.3E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Gene3D G3DSA:1.10.8.60 343 547 3.2E-45 T 28-03-2018 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SMART SM00382 198 344 7.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SMART SM00382 597 768 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.6E-55 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.1E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 5.2E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.6E-27 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS04475 e83690b03196102312f374b39e104ccd 857 SUPERFAMILY SSF81923 4 156 1.83E-42 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CO704_RS04475 e83690b03196102312f374b39e104ccd 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CO704_RS09225 c9b7326ecc48125591f09e744baee8fd 91 Pfam PF05166 YcgL domain 3 75 1.6E-31 T 28-03-2018 IPR027354 YcgL domain CO704_RS09225 c9b7326ecc48125591f09e744baee8fd 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 81 5.0E-34 T 28-03-2018 IPR027354 YcgL domain CO704_RS09225 c9b7326ecc48125591f09e744baee8fd 91 SUPERFAMILY SSF160191 1 87 3.66E-37 T 28-03-2018 CO704_RS09225 c9b7326ecc48125591f09e744baee8fd 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.345 T 28-03-2018 IPR027354 YcgL domain CO704_RS16250 7af04fec71d8d93519eddfb19c018260 473 SUPERFAMILY SSF53756 3 446 1.49E-94 T 28-03-2018 CO704_RS16250 7af04fec71d8d93519eddfb19c018260 473 Pfam PF00982 Glycosyltransferase family 20 20 446 5.6E-96 T 28-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 CO704_RS16250 7af04fec71d8d93519eddfb19c018260 473 Gene3D G3DSA:3.40.50.2000 239 431 4.1E-23 T 28-03-2018 CO704_RS16250 7af04fec71d8d93519eddfb19c018260 473 Gene3D G3DSA:3.40.50.2000 1 238 3.3E-52 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 SUPERFAMILY SSF52540 613 911 1.78E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:3.30.190.20 135 248 2.2E-43 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:3.40.50.300 35 134 1.6E-4 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:1.10.8.280 285 405 1.0E-37 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:3.40.50.300 3 34 0.0015 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:3.40.50.300 410 614 1.4E-21 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Gene3D G3DSA:3.40.50.300 615 941 9.9E-54 T 28-03-2018 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Pfam PF00005 ABC transporter 806 860 2.4E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.066 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 SUPERFAMILY SSF52540 433 569 5.33E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 SUPERFAMILY SSF52540 4 204 5.33E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22590 0340d151bab23eddcea2580713e616ce 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 SUPERFAMILY SSF50156 87 194 1.45E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 9.0E-164 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 Pfam PF02163 Peptidase family M50 10 438 3.1E-88 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 SUPERFAMILY SSF50156 196 292 1.71E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 Gene3D G3DSA:2.30.42.10 223 309 3.9E-20 T 28-03-2018 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 Gene3D G3DSA:2.30.42.10 126 220 1.6E-11 T 28-03-2018 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 SMART SM00228 115 186 0.43 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 SMART SM00228 211 280 7.3E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19275 eea81df4bee8d44eb1049522ac102423 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 212 276 1.4E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 Gene3D G3DSA:3.30.565.10 294 449 3.6E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 SMART SM00304 180 232 6.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 9.0E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 SUPERFAMILY SSF55874 292 440 1.3E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 439 2.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 Gene3D G3DSA:1.10.287.130 223 289 3.4E-12 T 28-03-2018 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 SUPERFAMILY SSF47384 217 291 1.28E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 Pfam PF00672 HAMP domain 182 225 2.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 SMART SM00388 233 293 2.2E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS00760 c5ba512d64300b3adabc44a13be86a33 449 SMART SM00387 332 440 1.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Gene3D G3DSA:1.20.5.70 347 376 1.3E-15 T 28-03-2018 CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Gene3D G3DSA:3.10.560.10 161 251 3.9E-25 T 28-03-2018 CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Gene3D G3DSA:3.10.560.10 252 346 6.5E-16 T 28-03-2018 CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 7.3E-27 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Pfam PF10531 SLBB domain 173 218 6.8E-7 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS07435 339ed2dee9257626279593c804dd9673 379 Gene3D G3DSA:3.30.1950.10 89 160 1.4E-24 T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 SUPERFAMILY SSF47413 4 62 8.34E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 Gene3D G3DSA:1.10.260.40 5 58 2.7E-20 T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.9E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 Gene3D G3DSA:3.40.50.2300 193 331 1.8E-35 T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 Gene3D G3DSA:3.40.50.2300 59 192 1.7E-28 T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 1.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 1.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 Pfam PF13377 Periplasmic binding protein-like domain 186 348 1.6E-28 T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 SMART SM00354 4 74 1.0E-30 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 28-03-2018 CO704_RS00460 56cde0ea723736da3ffbd653915c0622 348 SUPERFAMILY SSF53822 63 348 1.41E-53 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 SUPERFAMILY SSF46689 1 78 2.5E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 Gene3D G3DSA:1.10.10.60 2 48 7.2E-16 T 28-03-2018 CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 210 53.041 T 28-03-2018 IPR023764 Transcriptional repressor HTH, FabR CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 Gene3D G3DSA:1.10.357.10 83 175 6.2E-6 T 28-03-2018 CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS23500 fe587d10d597ab72d0c263028a232af8 214 Gene3D G3DSA:1.10.10.60 49 82 3.3E-8 T 28-03-2018 CO704_RS11925 4698a2c94febde650aa9a937038d9c03 119 SUPERFAMILY SSF54909 1 99 8.26E-27 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS11925 4698a2c94febde650aa9a937038d9c03 119 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.9E-14 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CO704_RS11925 4698a2c94febde650aa9a937038d9c03 119 Gene3D G3DSA:3.30.70.100 1 94 4.0E-21 T 28-03-2018 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.0E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 1.1E-54 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 Gene3D G3DSA:1.10.10.10 1 61 3.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 SUPERFAMILY SSF46785 3 76 6.19E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 SUPERFAMILY SSF100950 73 234 1.14E-30 T 28-03-2018 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 SMART SM00420 6 58 1.6E-25 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 Gene3D G3DSA:3.40.50.1360 72 239 1.2E-39 T 28-03-2018 CO704_RS00675 eb1e8e4e0bee10399f43c6f388e08906 252 SMART SM01134 72 233 2.0E-71 T 28-03-2018 CO704_RS05735 e9ded19e918c86df3b3bd40143d0dec5 191 SUPERFAMILY SSF55811 11 188 5.82E-49 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS05735 e9ded19e918c86df3b3bd40143d0dec5 191 Pfam PF00293 NUDIX domain 45 163 2.7E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS05735 e9ded19e918c86df3b3bd40143d0dec5 191 Gene3D G3DSA:3.90.79.10 1 191 4.4E-38 T 28-03-2018 CO704_RS05735 e9ded19e918c86df3b3bd40143d0dec5 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 7 186 5.1E-69 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 4.6E-152 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.0E-159 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS01840 c5d3be1d2e1583c3fc444ad08e7e8d4e 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 3.4E-105 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 Gene3D G3DSA:3.40.190.10 93 178 1.7E-17 T 28-03-2018 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 Gene3D G3DSA:1.10.10.10 2 85 2.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 SUPERFAMILY SSF53850 91 297 6.98E-46 T 28-03-2018 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 SUPERFAMILY SSF46785 6 113 5.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 Pfam PF03466 LysR substrate binding domain 89 292 6.1E-45 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 Gene3D G3DSA:3.40.190.10 179 262 4.5E-23 T 28-03-2018 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.9E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19110 f6c99d1a4ba02b452df5bedba6bd3b0c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 SMART SM00345 12 70 2.1E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 SMART SM00895 80 204 5.8E-15 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 SUPERFAMILY SSF46785 5 94 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 1.5E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 SUPERFAMILY SSF48008 76 211 6.8E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 Gene3D G3DSA:1.20.120.530 67 222 1.3E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 Gene3D G3DSA:1.10.10.10 1 66 2.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10705 e405af8dafd985e22330f5e297336ca0 226 Pfam PF07729 FCD domain 81 203 1.7E-17 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS05115 795e46c35fe9aee76b483b7157acca6d 299 Gene3D G3DSA:3.40.190.10 24 169 7.3E-32 T 28-03-2018 CO704_RS05115 795e46c35fe9aee76b483b7157acca6d 299 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 294 2.3E-52 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS05115 795e46c35fe9aee76b483b7157acca6d 299 Gene3D G3DSA:3.40.190.10 170 298 9.0E-18 T 28-03-2018 CO704_RS05115 795e46c35fe9aee76b483b7157acca6d 299 SUPERFAMILY SSF53850 33 294 1.22E-53 T 28-03-2018 CO704_RS21860 fc4e7cb6cf9cb901ae6f600f4ce5c02e 132 Pfam PF07511 Protein of unknown function (DUF1525) 20 126 1.4E-38 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 CO704_RS21860 fc4e7cb6cf9cb901ae6f600f4ce5c02e 132 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 20 128 4.7E-42 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 CO704_RS05625 5a021a7aded4b781779ebac53976d17c 118 Pfam PF03960 ArsC family 8 117 2.1E-22 T 28-03-2018 IPR006660 Arsenate reductase-like CO704_RS05625 5a021a7aded4b781779ebac53976d17c 118 SUPERFAMILY SSF52833 5 118 4.83E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05625 5a021a7aded4b781779ebac53976d17c 118 Gene3D G3DSA:3.40.30.10 1 118 7.3E-38 T 28-03-2018 CO704_RS05625 5a021a7aded4b781779ebac53976d17c 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 118 2.7E-50 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:3.40.50.920 255 417 1.6E-45 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 PIRSF PIRSF000159 1 1175 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF10371 Domain of unknown function 627 678 3.4E-23 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:3.40.50.970 793 1170 6.9E-105 T 28-03-2018 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1167 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.5E-82 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SMART SM00890 622 679 2.0E-29 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SUPERFAMILY SSF52518 2 254 1.71E-75 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 956 1068 2.1E-8 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 1.2E-31 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF12838 4Fe-4S dicluster domain 689 757 1.5E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:3.40.920.10 418 623 2.3E-51 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SUPERFAMILY SSF52922 256 411 4.14E-45 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SUPERFAMILY SSF53323 419 668 1.44E-72 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:3.30.70.20 669 791 1.5E-30 T 28-03-2018 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SUPERFAMILY SSF54862 665 839 2.51E-23 T 28-03-2018 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:3.40.50.970 1 254 1.9E-50 T 28-03-2018 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Gene3D G3DSA:4.10.780.10 634 668 2.2E-15 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 7.7E-16 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CO704_RS11915 6a28b2dbee73b17baf416038a7d046f8 1175 SUPERFAMILY SSF52518 794 1168 4.67E-120 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS05190 a23a42531061980872dd21b899b0328b 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 194 1.3E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 220 41.468 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 219 7.9E-96 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.2E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.2E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 1.2E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 1.2E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS05190 a23a42531061980872dd21b899b0328b 227 SUPERFAMILY SSF56784 1 218 1.23E-60 T 28-03-2018 IPR023214 HAD-like domain CO704_RS05190 a23a42531061980872dd21b899b0328b 227 Gene3D G3DSA:3.40.50.1000 2 224 4.9E-18 T 28-03-2018 IPR023214 HAD-like domain CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 202 243 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 231 6.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 247 6.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 Gene3D G3DSA:2.60.120.10 8 153 3.7E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 SMART SM00342 165 247 9.9E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 Pfam PF02311 AraC-like ligand binding domain 16 101 3.5E-7 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 Gene3D G3DSA:1.10.10.60 206 250 1.5E-8 T 28-03-2018 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 SUPERFAMILY SSF51182 19 185 1.25E-10 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 Pfam PF12833 Helix-turn-helix domain 171 248 5.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 Gene3D G3DSA:1.10.10.60 154 205 4.0E-10 T 28-03-2018 CO704_RS09360 16839ff9c95eff6ece6528758f710db5 256 SUPERFAMILY SSF46689 202 249 1.57E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13895 e2ac2ff981445ce1363580bf504e8c56 296 Pfam PF00892 EamA-like transporter family 9 136 3.0E-6 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13895 e2ac2ff981445ce1363580bf504e8c56 296 Pfam PF00892 EamA-like transporter family 161 287 2.8E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13895 e2ac2ff981445ce1363580bf504e8c56 296 SUPERFAMILY SSF103481 192 293 1.09E-8 T 28-03-2018 CO704_RS13895 e2ac2ff981445ce1363580bf504e8c56 296 SUPERFAMILY SSF103481 47 142 1.7E-5 T 28-03-2018 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 1.6E-172 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 299 316 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 95 124 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 167 196 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 212 240 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 129 158 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 PRINTS PR00142 RecA protein signature 245 274 4.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 ProSitePatterns PS00321 recA signature. 215 223 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 Pfam PF00154 recA bacterial DNA recombination protein 9 270 8.3E-142 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 SMART SM00382 59 230 1.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 Gene3D G3DSA:3.30.250.10 272 328 8.9E-26 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 Hamap MF_00268 Protein RecA [recA]. 7 331 51.045 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 SUPERFAMILY SSF52540 6 269 1.38E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 SUPERFAMILY SSF54752 272 327 6.28E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CO704_RS03845 330d8db17d36fccb062300613a21b1b9 354 Gene3D G3DSA:3.40.50.300 28 270 2.0E-46 T 28-03-2018 CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 Gene3D G3DSA:1.10.10.10 24 116 8.8E-40 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 Pfam PF17193 MukF C-terminal domain 283 440 2.7E-79 T 28-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 Pfam PF03882 MukF winged-helix domain 3 117 6.8E-57 T 28-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 PIRSF PIRSF018282 1 440 4.8E-242 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 Pfam PF17192 MukF middle domain 121 281 3.3E-84 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 56.609 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 SUPERFAMILY SSF140570 119 281 3.92E-77 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CO704_RS15530 2098276492137f4454d481f354c7eb7f 440 SUPERFAMILY SSF46785 8 118 1.52E-48 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 SUPERFAMILY SSF55811 79 241 1.9E-39 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 SUPERFAMILY SSF55811 3 96 7.3E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 Gene3D G3DSA:3.90.79.10 126 257 2.0E-34 T 28-03-2018 CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 Pfam PF00293 NUDIX domain 132 234 4.5E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.8E-10 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CO704_RS22875 90fe12902c4c2a75eedf9258e0796e56 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 45.802 T 28-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CO704_RS12685 9c820c975f553919e3aef0d0c317028d 213 Pfam PF00574 Clp protease 30 195 1.6E-16 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CO704_RS12685 9c820c975f553919e3aef0d0c317028d 213 Gene3D G3DSA:3.90.226.10 15 198 9.2E-19 T 28-03-2018 CO704_RS12685 9c820c975f553919e3aef0d0c317028d 213 SUPERFAMILY SSF52096 13 195 7.85E-25 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS24615 01267583ad6fda8dd250a11d7f3c4c61 257 Pfam PF00563 EAL domain 28 243 1.7E-30 T 28-03-2018 IPR001633 EAL domain CO704_RS24615 01267583ad6fda8dd250a11d7f3c4c61 257 Gene3D G3DSA:3.20.20.450 19 255 5.8E-33 T 28-03-2018 IPR001633 EAL domain CO704_RS24615 01267583ad6fda8dd250a11d7f3c4c61 257 SUPERFAMILY SSF141868 26 254 2.48E-33 T 28-03-2018 IPR001633 EAL domain CO704_RS24615 01267583ad6fda8dd250a11d7f3c4c61 257 SMART SM00052 8 248 2.6E-32 T 28-03-2018 IPR001633 EAL domain CO704_RS21810 d2fe54d859a31d4dbaf45bf2968134fe 303 Pfam PF12835 Integrase 114 261 6.3E-54 T 28-03-2018 IPR024456 Integrase catalytic domain, putative CO704_RS21810 d2fe54d859a31d4dbaf45bf2968134fe 303 Gene3D G3DSA:1.10.150.130 11 133 8.2E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS21810 d2fe54d859a31d4dbaf45bf2968134fe 303 SUPERFAMILY SSF56349 17 262 7.85E-13 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS21810 d2fe54d859a31d4dbaf45bf2968134fe 303 Pfam PF12834 Phage integrase, N-terminal 15 100 1.6E-18 T 28-03-2018 IPR024457 Putative integrase, N-terminal CO704_RS21810 d2fe54d859a31d4dbaf45bf2968134fe 303 Gene3D G3DSA:1.10.443.10 134 298 5.1E-8 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 2.6E-94 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 SUPERFAMILY SSF51569 3 283 3.08E-96 T 28-03-2018 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 PIRSF PIRSF001359 1 284 1.2E-111 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.6E-109 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 Gene3D G3DSA:3.20.20.70 1 285 2.1E-102 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS21130 f697e8ee7aafef1c3a4a8a8e2b8c0e34 292 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 5.4E-155 T 28-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CO704_RS26020 d1f72830776270267b2a10036a74dc30 577 Gene3D G3DSA:3.40.50.1820 229 552 5.0E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS26020 d1f72830776270267b2a10036a74dc30 577 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 85 256 5.0E-58 T 28-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CO704_RS26020 d1f72830776270267b2a10036a74dc30 577 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 50 573 1.1E-201 T 28-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 CO704_RS26020 d1f72830776270267b2a10036a74dc30 577 SUPERFAMILY SSF53474 227 505 1.04E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 215 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 234 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 247 267 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 186 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 Pfam PF00106 short chain dehydrogenase 51 239 2.5E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 51 232 0.0031 T 28-03-2018 CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 Gene3D G3DSA:3.40.50.720 209 273 1.3E-10 T 28-03-2018 CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 Gene3D G3DSA:3.40.50.720 47 208 2.2E-45 T 28-03-2018 CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 183 211 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS25780 aec7fc89380e647bf302a748e2302dc3 285 SUPERFAMILY SSF51735 47 269 1.27E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 SMART SM01209 103 296 4.4E-143 T 28-03-2018 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 SUPERFAMILY SSF56059 104 321 7.6E-69 T 28-03-2018 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 SUPERFAMILY SSF51246 329 425 4.79E-30 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 422 1.7E-26 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 SMART SM01210 330 424 6.2E-47 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Gene3D G3DSA:3.90.600.10 330 425 3.8E-31 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Gene3D G3DSA:3.30.1490.20 135 189 4.0E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Gene3D G3DSA:3.40.50.20 2 95 2.9E-37 T 28-03-2018 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.944 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 3.3E-185 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.6E-35 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 SUPERFAMILY SSF52440 1 103 4.46E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Gene3D G3DSA:3.30.470.20 191 329 2.5E-62 T 28-03-2018 CO704_RS22845 7f56472a4208d3ba67fc2a97b8e7be3e 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.1E-83 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 Gene3D G3DSA:3.60.21.10 1 280 6.9E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 PIRSF PIRSF000903 1 275 3.2E-125 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 277 4.7E-156 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.876 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 Pfam PF00149 Calcineurin-like phosphoesterase 2 133 6.5E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS19810 9c68b2acc7eeee367a7a90e46a6e3cf7 283 SUPERFAMILY SSF56300 1 262 7.9E-59 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:1.20.1640.10 809 1012 1.2E-38 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:1.20.1640.10 267 489 7.5E-46 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82866 787 1011 2.75E-46 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:3.30.2090.10 704 790 1.5E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Pfam PF00873 AcrB/AcrD/AcrF family 5 1009 1.8E-299 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.1E-63 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82693 137 182 4.19E-20 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82693 268 324 4.19E-20 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:3.30.70.1430 560 651 1.6E-6 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82714 704 788 6.93E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:3.30.70.1430 41 142 9.4E-25 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 Gene3D G3DSA:3.30.2090.10 181 266 9.8E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82866 290 486 2.22E-44 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82714 183 265 4.32E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82693 41 132 6.02E-23 T 28-03-2018 CO704_RS11405 0c0af42191328540af7ffafbfd36034d 1018 SUPERFAMILY SSF82693 558 647 1.18E-5 T 28-03-2018 CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 362 390 6.8E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 446 472 1.3E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 293 324 5.1E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 726 763 1.2E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 230 264 9.2E-9 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Pfam PF01011 PQQ enzyme repeat 669 701 2.1E-4 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SUPERFAMILY SSF50998 166 526 1.57E-158 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SUPERFAMILY SSF50998 562 797 1.57E-158 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 408 429 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 19 797 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 391 462 310.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 224 255 7.5E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 720 753 0.0022 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 486 517 670.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 343 384 0.0037 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 SMART SM00564 286 318 52.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS19485 bca58cdbab22244a92c75c060f4c3176 801 Gene3D G3DSA:2.140.10.10 159 795 8.5E-104 T 28-03-2018 CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 SUPERFAMILY SSF51735 5 246 4.33E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 0.0023 T 28-03-2018 CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 8.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 Gene3D G3DSA:3.40.50.720 2 50 4.1E-11 T 28-03-2018 CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 Gene3D G3DSA:3.40.50.720 51 252 9.2E-55 T 28-03-2018 CO704_RS18780 dd218271dbfff486720da19dac112ed3 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 245 1.4E-55 T 28-03-2018 CO704_RS00845 411d144e2223f86159dbec30cd5ccd3f 430 Gene3D G3DSA:3.30.70.1070 349 413 0.001 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS00845 411d144e2223f86159dbec30cd5ccd3f 430 Hamap MF_02021 Cell division protein DamX [damX]. 1 430 25.868 T 28-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 CO704_RS00845 411d144e2223f86159dbec30cd5ccd3f 430 Pfam PF05036 Sporulation related domain 347 419 9.3E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS00845 411d144e2223f86159dbec30cd5ccd3f 430 SUPERFAMILY SSF110997 346 410 1.83E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS01015 2f898e2635c909471ec202b8592c0f80 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 3.6E-31 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CO704_RS01015 2f898e2635c909471ec202b8592c0f80 66 Gene3D G3DSA:2.20.25.10 11 51 5.7E-4 T 28-03-2018 CO704_RS01015 2f898e2635c909471ec202b8592c0f80 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 59 2.4E-19 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SMART SM00959 5 47 5.6E-16 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Gene3D G3DSA:3.40.50.300 129 419 7.7E-58 T 28-03-2018 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SMART SM00382 170 355 5.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-15 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SUPERFAMILY SSF52540 90 371 1.84E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 SMART SM00357 52 118 9.6E-19 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Gene3D G3DSA:2.40.50.140 2 126 2.0E-46 T 28-03-2018 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.2E-222 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CO704_RS23355 8665e5d5feb0dc3de78e9e3cebe7dcd7 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.144 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 SUPERFAMILY SSF51556 57 384 8.45E-96 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 SUPERFAMILY SSF51338 353 460 4.05E-35 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 Gene3D G3DSA:2.30.40.10 1 65 1.5E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 Pfam PF01979 Amidohydrolase family 53 437 3.1E-20 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 456 1.1E-188 T 28-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 SUPERFAMILY SSF51338 1 67 1.57E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 Gene3D G3DSA:3.20.20.140 66 283 4.5E-52 T 28-03-2018 CO704_RS11005 6e011d2c55871e9da29f5af6fd3605e1 471 Gene3D G3DSA:3.20.20.140 284 425 3.3E-41 T 28-03-2018 CO704_RS22515 302b830082ff113554a21f652632980d 107 SUPERFAMILY SSF46689 57 106 2.55E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS22515 302b830082ff113554a21f652632980d 107 SMART SM00342 21 104 1.2E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS22515 302b830082ff113554a21f652632980d 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS22515 302b830082ff113554a21f652632980d 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 5.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS22515 302b830082ff113554a21f652632980d 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 5.8E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS22515 302b830082ff113554a21f652632980d 107 Gene3D G3DSA:1.10.10.60 1 57 5.6E-15 T 28-03-2018 CO704_RS22515 302b830082ff113554a21f652632980d 107 Pfam PF12833 Helix-turn-helix domain 27 105 1.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS22515 302b830082ff113554a21f652632980d 107 SUPERFAMILY SSF46689 5 56 1.66E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS22515 302b830082ff113554a21f652632980d 107 Gene3D G3DSA:1.10.10.60 58 107 4.1E-14 T 28-03-2018 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Gene3D G3DSA:1.10.10.10 1 68 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Gene3D G3DSA:1.10.10.60 101 201 7.7E-5 T 28-03-2018 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Pfam PF09299 Mu transposase, C-terminal 542 599 1.1E-11 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 SUPERFAMILY SSF50610 529 604 1.06E-19 T 28-03-2018 IPR009004 Transposase, Mu, C-terminal CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Gene3D G3DSA:1.10.10.60 223 288 2.9E-9 T 28-03-2018 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Gene3D G3DSA:3.30.420.10 295 534 5.2E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Gene3D G3DSA:2.30.30.130 537 602 7.9E-16 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Pfam PF00665 Integrase core domain 310 430 3.9E-13 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 SUPERFAMILY SSF46955 2 69 4.85E-12 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 Pfam PF02316 Mu DNA-binding domain 7 75 2.8E-5 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CO704_RS09920 67fd868fe7a01c2e1c35eb2ae11554be 687 SUPERFAMILY SSF53098 306 520 3.04E-46 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 SUPERFAMILY SSF56059 113 315 1.52E-55 T 28-03-2018 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 SUPERFAMILY SSF52440 3 112 2.73E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.569 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 Gene3D G3DSA:3.30.1490.20 129 197 5.4E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 Gene3D G3DSA:3.30.470.20 198 392 2.5E-36 T 28-03-2018 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 Pfam PF02222 ATP-grasp domain 123 295 1.6E-55 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 Gene3D G3DSA:3.40.50.20 14 112 3.6E-21 T 28-03-2018 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 SUPERFAMILY SSF51246 319 391 7.85E-19 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS08950 f2ae2e0b946eeb0262aa69773d5c2941 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 2.9E-187 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 2.5E-87 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 Gene3D G3DSA:3.40.50.620 1 190 1.4E-73 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 6.4E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 6.4E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 6.4E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.4E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.592 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 SUPERFAMILY SSF52374 5 330 3.5E-97 T 28-03-2018 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 2.4E-118 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS00865 8d7b7231db435191256e9c5c38672e55 334 Gene3D G3DSA:1.10.240.10 191 313 2.6E-31 T 28-03-2018 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 SUPERFAMILY SSF69189 284 377 1.31E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.1E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.1E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.1E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 SMART SM00936 284 375 1.3E-33 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 Gene3D G3DSA:2.60.410.10 301 375 3.4E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 SUPERFAMILY SSF56601 14 284 1.41E-81 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 264 2.1E-99 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 Gene3D G3DSA:3.40.710.10 19 300 2.0E-53 T 28-03-2018 CO704_RS07180 68d7be0d1644dd0a4ea185a3b9bd3d0e 399 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 375 2.2E-22 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.78 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.9E-140 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 236 1.7E-15 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 PIRSF PIRSF003095 1 432 8.4E-128 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 SUPERFAMILY SSF102735 1 131 2.62E-38 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Gene3D G3DSA:3.30.70.1050 1 118 3.0E-34 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.4E-41 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Gene3D G3DSA:1.10.3120.10 211 389 2.1E-44 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 2.7E-39 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 SUPERFAMILY SSF109998 249 429 1.15E-45 T 28-03-2018 IPR027304 Trigger factor/SurA domain CO704_RS18185 0ebc779b08e17d251fa8b697023c4890 432 SUPERFAMILY SSF54534 96 241 1.1E-38 T 28-03-2018 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 SUPERFAMILY SSF51197 6 287 1.58E-83 T 28-03-2018 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 Gene3D G3DSA:2.60.120.330 7 330 3.9E-89 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 180 277 8.5E-20 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 PRINTS PR00682 Isopenicillin N synthase signature 202 223 4.9E-12 T 28-03-2018 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 PRINTS PR00682 Isopenicillin N synthase signature 31 48 4.9E-12 T 28-03-2018 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 PRINTS PR00682 Isopenicillin N synthase signature 238 264 4.9E-12 T 28-03-2018 CO704_RS05315 0521d218b05e124781bcbce2d6189302 345 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 9 132 7.3E-38 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CO704_RS00075 f7ea29192e323fdcfb09a5c5f3f64423 466 Pfam PF02321 Outer membrane efflux protein 279 450 1.4E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS00075 f7ea29192e323fdcfb09a5c5f3f64423 466 Pfam PF02321 Outer membrane efflux protein 66 241 1.1E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS00075 f7ea29192e323fdcfb09a5c5f3f64423 466 SUPERFAMILY SSF56954 4 454 2.09E-76 T 28-03-2018 CO704_RS00075 f7ea29192e323fdcfb09a5c5f3f64423 466 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 454 2.5E-67 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CO704_RS00075 f7ea29192e323fdcfb09a5c5f3f64423 466 Gene3D G3DSA:1.20.1600.10 32 455 2.0E-70 T 28-03-2018 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 Gene3D G3DSA:3.40.50.880 8 218 2.7E-50 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 Pfam PF01965 DJ-1/PfpI family 44 181 1.1E-16 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 Gene3D G3DSA:1.10.10.60 272 327 3.2E-12 T 28-03-2018 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 SUPERFAMILY SSF46689 272 322 4.79E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 SMART SM00342 236 319 2.2E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 SUPERFAMILY SSF52317 13 202 1.41E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 Pfam PF12833 Helix-turn-helix domain 242 320 3.3E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 Gene3D G3DSA:1.10.10.60 219 271 9.1E-15 T 28-03-2018 CO704_RS05525 477882da600385f71fc69e5a35e2857c 332 SUPERFAMILY SSF46689 222 269 5.53E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS23975 6372b999304c35b3c0596eff76999bed 207 Gene3D G3DSA:3.40.30.10 17 207 2.7E-35 T 28-03-2018 CO704_RS23975 6372b999304c35b3c0596eff76999bed 207 PIRSF PIRSF001488 1 207 9.2E-89 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CO704_RS23975 6372b999304c35b3c0596eff76999bed 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 4.2E-30 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CO704_RS23975 6372b999304c35b3c0596eff76999bed 207 SUPERFAMILY SSF52833 20 205 4.55E-47 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS23975 6372b999304c35b3c0596eff76999bed 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS03610 22647bafa488b132af79a419a812d7fd 451 Pfam PF00083 Sugar (and other) transporter 29 430 4.4E-54 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS03610 22647bafa488b132af79a419a812d7fd 451 Gene3D G3DSA:1.20.1250.20 229 448 3.5E-25 T 28-03-2018 CO704_RS03610 22647bafa488b132af79a419a812d7fd 451 SUPERFAMILY SSF103473 9 430 1.16E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03610 22647bafa488b132af79a419a812d7fd 451 Gene3D G3DSA:1.20.1250.20 11 213 1.1E-37 T 28-03-2018 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.183 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 Gene3D G3DSA:3.40.50.2300 54 173 0.0061 T 28-03-2018 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 SUPERFAMILY SSF143975 3 420 1.03E-133 T 28-03-2018 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 Pfam PF00920 Dehydratase family 34 607 1.8E-217 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 3.6E-269 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 SUPERFAMILY SSF52016 421 610 5.1E-59 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS23410 f9c97203b8b7049d68191870b7367021 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 7.5E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 Gene3D G3DSA:1.10.10.10 1 79 7.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 6.5E-122 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 Gene3D G3DSA:1.20.120.530 80 239 4.7E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 SUPERFAMILY SSF48008 79 230 1.31E-64 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 161.358 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 SUPERFAMILY SSF46785 11 87 1.82E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 Pfam PF07840 FadR C-terminal domain 72 234 4.6E-73 T 28-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CO704_RS09265 0aa60f0d7f04bc7783f3115b19c8db16 239 SMART SM00345 12 71 4.4E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 SUPERFAMILY SSF54534 49 126 4.71E-17 T 28-03-2018 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 Gene3D G3DSA:3.10.50.30 45 136 8.4E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 42.856 T 28-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 2.9E-19 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 PIRSF PIRSF006092 21 128 1.2E-23 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 Gene3D G3DSA:1.10.286.20 3 43 9.9E-14 T 28-03-2018 CO704_RS17350 1bb1f182cd1c8c8d491e4a7d8968494f 136 Pfam PF14760 Rnk N-terminus 4 42 4.2E-13 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 Gene3D G3DSA:1.20.1250.20 7 200 6.9E-35 T 28-03-2018 CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 Pfam PF07690 Major Facilitator Superfamily 16 357 3.6E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 Gene3D G3DSA:1.20.1250.20 208 398 1.1E-17 T 28-03-2018 CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 390 8.4E-148 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 SUPERFAMILY SSF103473 11 395 1.83E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06815 6b336306d7bb1c4c3196bc253b74d86d 398 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 9.2E-41 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 SUPERFAMILY SSF53850 95 302 6.21E-41 T 28-03-2018 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 Pfam PF03466 LysR substrate binding domain 95 301 2.5E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 Gene3D G3DSA:1.10.10.10 3 90 3.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 SUPERFAMILY SSF46785 8 118 4.84E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 Gene3D G3DSA:3.40.190.10 182 271 2.3E-22 T 28-03-2018 CO704_RS09625 f8fd0902ca9ee6402f166ca1b0429aa5 303 Gene3D G3DSA:3.40.190.10 95 181 1.4E-12 T 28-03-2018 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Pfam PF09285 Elongation factor P, C-terminal 133 184 1.7E-16 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Gene3D G3DSA:2.40.50.140 133 188 4.4E-18 T 28-03-2018 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 SUPERFAMILY SSF50249 68 130 3.13E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 SMART SM01185 69 125 3.8E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 PIRSF PIRSF005901 1 190 1.5E-58 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 SUPERFAMILY SSF50249 132 188 2.57E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Gene3D G3DSA:2.40.50.140 66 131 2.6E-15 T 28-03-2018 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.057 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 1.4E-13 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Gene3D G3DSA:2.30.30.30 2 63 8.6E-17 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 SUPERFAMILY SSF50104 1 64 1.87E-11 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 SMART SM00841 133 188 1.5E-22 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.9E-96 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP CO704_RS06875 9a1c4b88ff6a107c4990ae1f1f499c1f 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 3.7E-17 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 Pfam PF02690 Na+/Pi-cotransporter 158 246 3.4E-7 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 3.0E-35 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 3.2E-126 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 Gene3D G3DSA:1.20.58.220 431 543 7.4E-7 T 28-03-2018 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 SUPERFAMILY SSF109755 320 531 7.12E-25 T 28-03-2018 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 2.5E-150 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CO704_RS22780 c29aa7bc7f7ed62d9e3b357257af51c9 543 Gene3D G3DSA:1.20.58.220 323 430 8.0E-9 T 28-03-2018 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 SUPERFAMILY SSF52833 2 112 4.26E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Pfam PF00085 Thioredoxin 6 108 3.5E-20 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.0E-22 T 28-03-2018 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Gene3D G3DSA:3.40.30.10 1 124 3.5E-30 T 28-03-2018 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 SUPERFAMILY SSF48452 116 246 1.11E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Gene3D G3DSA:1.25.40.10 125 196 1.4E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Gene3D G3DSA:1.25.40.10 197 284 3.3E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS05495 33207e048d3a6dcb8c0713c31bd789a3 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.2E-28 T 28-03-2018 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 SUPERFAMILY SSF46785 5 143 2.9E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 SMART SM00347 31 132 6.6E-30 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 Gene3D G3DSA:1.10.10.10 7 144 1.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.1E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.1E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.1E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.1E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 Pfam PF01047 MarR family 38 96 4.6E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS10760 29f53dda136fc20b82cdb7972a8601ba 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 Gene3D G3DSA:1.10.10.10 126 228 7.2E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.1E-114 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 SUPERFAMILY SSF46894 129 226 1.53E-31 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 SUPERFAMILY SSF52172 3 126 3.13E-42 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 SMART SM00862 150 225 3.5E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 SMART SM00448 3 116 4.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 Pfam PF00072 Response regulator receiver domain 5 117 1.1E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 Gene3D G3DSA:3.40.50.2300 2 125 3.0E-36 T 28-03-2018 CO704_RS18415 75d45f36f62163613129dcb55c906df5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.8E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 SUPERFAMILY SSF54534 283 384 7.2E-32 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.199 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 SUPERFAMILY SSF54534 173 275 2.03E-28 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Pfam PF13616 PPIC-type PPIASE domain 282 383 2.8E-26 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Gene3D G3DSA:1.10.4030.10 21 148 1.2E-24 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Pfam PF09312 SurA N-terminal domain 25 142 5.7E-45 T 28-03-2018 IPR015391 SurA N-terminal CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Pfam PF00639 PPIC-type PPIASE domain 178 272 5.6E-22 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Gene3D G3DSA:3.10.50.40 163 278 7.2E-24 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 Gene3D G3DSA:3.10.50.40 279 386 3.4E-32 T 28-03-2018 CO704_RS19790 ca813471d6d0aa8beb66f39ce6376c77 430 SUPERFAMILY SSF109998 25 200 2.94E-42 T 28-03-2018 IPR027304 Trigger factor/SurA domain CO704_RS18245 5f642e77c0b0d294e9307386c90039f5 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site CO704_RS18245 5f642e77c0b0d294e9307386c90039f5 295 Pfam PF01040 UbiA prenyltransferase family 18 267 5.5E-60 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CO704_RS18245 5f642e77c0b0d294e9307386c90039f5 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.075 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CO704_RS18245 5f642e77c0b0d294e9307386c90039f5 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 6.0E-92 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CO704_RS02745 1aaef71839011023afcc226147107415 362 SMART SM00478 41 192 4.4E-55 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Gene3D G3DSA:3.90.79.10 233 352 1.8E-9 T 28-03-2018 CO704_RS02745 1aaef71839011023afcc226147107415 362 Pfam PF00633 Helix-hairpin-helix motif 102 129 2.0E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 SUPERFAMILY SSF55811 222 346 3.06E-25 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS02745 1aaef71839011023afcc226147107415 362 SUPERFAMILY SSF48150 5 227 1.73E-79 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Pfam PF14815 NUDIX domain 236 345 6.2E-22 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Gene3D G3DSA:1.10.1670.10 120 227 2.8E-34 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 278 9.1E-129 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CO704_RS02745 1aaef71839011023afcc226147107415 362 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Gene3D G3DSA:1.10.340.30 23 119 4.1E-34 T 28-03-2018 CO704_RS02745 1aaef71839011023afcc226147107415 362 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 194 210 7.4E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 170 2.6E-23 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS02745 1aaef71839011023afcc226147107415 362 SMART SM00525 193 213 8.1E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 Gene3D G3DSA:3.30.540.10 2 138 2.4E-35 T 28-03-2018 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 Pfam PF00459 Inositol monophosphatase family 10 239 1.4E-46 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 Gene3D G3DSA:3.40.190.80 139 256 1.8E-16 T 28-03-2018 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 SUPERFAMILY SSF56655 5 251 1.16E-60 T 28-03-2018 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 202 226 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS11665 2cf434646fe739543c6dada97de3b490 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 1.9E-31 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS00440 c4cb51377aebe1253d4496e9fa0c9023 81 Gene3D G3DSA:3.30.110.40 4 81 1.2E-27 T 28-03-2018 IPR001455 TusA-like domain CO704_RS00440 c4cb51377aebe1253d4496e9fa0c9023 81 Pfam PF01206 Sulfurtransferase TusA 10 79 8.9E-24 T 28-03-2018 IPR001455 TusA-like domain CO704_RS00440 c4cb51377aebe1253d4496e9fa0c9023 81 SUPERFAMILY SSF64307 4 79 5.49E-26 T 28-03-2018 IPR001455 TusA-like domain CO704_RS00440 c4cb51377aebe1253d4496e9fa0c9023 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.24 T 28-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CO704_RS00440 c4cb51377aebe1253d4496e9fa0c9023 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 28-03-2018 IPR001455 TusA-like domain CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 Gene3D G3DSA:1.10.10.10 126 239 5.8E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 SMART SM00448 5 116 8.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 28-03-2018 CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS00755 565d46a7daacec81f8746b7d9159a23d 239 SMART SM00862 156 232 1.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS16785 7d19b58d234e7d62e1055ce4d2a44ad2 77 SUPERFAMILY SSF47413 8 74 7.87E-26 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS16785 7d19b58d234e7d62e1055ce4d2a44ad2 77 Pfam PF13693 Winged helix-turn-helix DNA-binding 10 75 9.5E-29 T 28-03-2018 CO704_RS16785 7d19b58d234e7d62e1055ce4d2a44ad2 77 Gene3D G3DSA:1.10.260.40 4 76 3.3E-11 T 28-03-2018 CO704_RS09915 7d19b58d234e7d62e1055ce4d2a44ad2 77 SUPERFAMILY SSF47413 8 74 7.87E-26 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS09915 7d19b58d234e7d62e1055ce4d2a44ad2 77 Pfam PF13693 Winged helix-turn-helix DNA-binding 10 75 9.5E-29 T 28-03-2018 CO704_RS09915 7d19b58d234e7d62e1055ce4d2a44ad2 77 Gene3D G3DSA:1.10.260.40 4 76 3.3E-11 T 28-03-2018 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 227 8.2E-22 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.2E-138 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 Gene3D G3DSA:3.40.50.1360 1 266 2.8E-87 T 28-03-2018 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.464 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CO704_RS17095 e0abe5d76379e0ed888206a0b3b5a150 266 SUPERFAMILY SSF100950 1 263 7.85E-104 T 28-03-2018 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 SUPERFAMILY SSF51569 20 328 5.68E-96 T 28-03-2018 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 Gene3D G3DSA:3.20.20.70 8 376 2.0E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 550 9.3E-20 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 549 2.2E-232 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 553 50.934 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 Pfam PF00682 HMGL-like 31 311 1.8E-72 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 SUPERFAMILY SSF110921 444 550 2.22E-24 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 SUPERFAMILY SSF89000 388 436 1.37E-12 T 28-03-2018 CO704_RS03915 5e2ba3ffc9e273f11a189733f4b391ae 553 SMART SM00917 422 550 1.0E-15 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 SUPERFAMILY SSF56784 8 217 2.85E-49 T 28-03-2018 IPR023214 HAD-like domain CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 Gene3D G3DSA:3.40.50.1000 78 199 4.9E-27 T 28-03-2018 IPR023214 HAD-like domain CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 191 9.4E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 1.1E-23 T 28-03-2018 IPR023214 HAD-like domain CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 Gene3D G3DSA:3.40.50.1000 2 31 0.067 T 28-03-2018 IPR023214 HAD-like domain CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 Gene3D G3DSA:1.10.150.240 32 77 1.8E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 5.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 5.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS13865 f7de477667520bb7b94b62aa3736ac77 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 Pfam PF00005 ABC transporter 348 491 9.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 Pfam PF00005 ABC transporter 28 167 5.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 SUPERFAMILY SSF52540 7 230 5.01E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 Gene3D G3DSA:3.40.50.300 4 282 1.6E-53 T 28-03-2018 CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 Gene3D G3DSA:3.40.50.300 328 567 4.7E-60 T 28-03-2018 CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 SUPERFAMILY SSF52540 327 551 7.83E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 SMART SM00382 356 537 1.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 SMART SM00382 34 268 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16390 a8df9b00c0581d598070f986d094765e 582 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.9E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.5E-124 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 Gene3D G3DSA:3.50.50.60 129 243 1.6E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 SUPERFAMILY SSF51905 3 315 6.6E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 6.5E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 Gene3D G3DSA:3.50.50.60 2 128 5.1E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 Gene3D G3DSA:3.50.50.60 262 321 0.27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.9E-41 T 28-03-2018 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.9E-41 T 28-03-2018 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.9E-41 T 28-03-2018 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.9E-41 T 28-03-2018 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.9E-41 T 28-03-2018 CO704_RS15680 3269b1dae3f7f6add5d38a21bf725c19 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.6E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 PIRSF PIRSF002133 1 124 7.6E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.655 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 Gene3D G3DSA:2.40.50.140 1 124 2.4E-63 T 28-03-2018 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 SUPERFAMILY SSF50249 3 123 1.2E-51 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 Pfam PF00164 Ribosomal protein S12/S23 14 123 1.3E-42 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01055 881d9d08e607b035e536b7dded8037c7 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Pfam PF13180 PDZ domain 295 384 2.5E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 225 242 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 2.4E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Gene3D G3DSA:2.30.42.10 410 479 6.6E-16 T 28-03-2018 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 398 468 1.4E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SUPERFAMILY SSF50156 407 476 3.81E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 478 2.3E-164 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SUPERFAMILY SSF50494 115 302 7.27E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SUPERFAMILY SSF50494 8 60 7.27E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SMART SM00228 293 375 3.8E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SMART SM00228 400 472 1.9E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Pfam PF13365 Trypsin-like peptidase domain 118 254 2.2E-32 T 28-03-2018 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Gene3D G3DSA:2.40.10.10 21 168 5.4E-32 T 28-03-2018 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 SUPERFAMILY SSF50156 275 384 4.66E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Gene3D G3DSA:2.30.42.10 288 397 1.1E-25 T 28-03-2018 CO704_RS19335 cbdfd5bd9ebbdd5c50ef7e641df737d2 480 Gene3D G3DSA:2.40.10.10 169 283 3.6E-43 T 28-03-2018 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 SUPERFAMILY SSF50104 2 63 5.66E-18 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 SUPERFAMILY SSF50249 70 128 6.0E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 SUPERFAMILY SSF50249 130 187 7.2E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 SMART SM00841 131 186 2.7E-33 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 SMART SM01185 69 123 6.8E-26 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 PIRSF PIRSF005901 2 188 4.4E-67 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.8E-26 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Gene3D G3DSA:2.40.50.140 67 129 1.3E-24 T 28-03-2018 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 7.6E-77 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 51.016 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.0E-22 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Gene3D G3DSA:2.40.50.140 131 186 8.2E-28 T 28-03-2018 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Gene3D G3DSA:2.30.30.30 4 63 2.0E-24 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS21375 a061b79a5c0dd787d3cac5baaa8b005c 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 5.3E-24 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Gene3D G3DSA:1.10.8.60 460 554 1.0E-20 T 28-03-2018 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Gene3D G3DSA:3.30.450.20 163 266 7.9E-8 T 28-03-2018 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 SUPERFAMILY SSF55785 161 212 1.47E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 SMART SM00382 292 436 1.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Gene3D G3DSA:1.10.10.60 555 591 7.7E-15 T 28-03-2018 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 SUPERFAMILY SSF52540 272 515 1.6E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Pfam PF02954 Bacterial regulatory protein, Fis family 550 589 2.0E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Pfam PF00158 Sigma-54 interaction domain 273 439 5.7E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Pfam PF13188 PAS domain 164 200 4.2E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 Gene3D G3DSA:3.40.50.300 267 459 2.9E-31 T 28-03-2018 CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 SMART SM00091 160 226 3.0E-6 T 28-03-2018 IPR000014 PAS domain CO704_RS11025 f7d966675742d09c069bb7aa4ad1ee16 594 SUPERFAMILY SSF46689 550 592 8.19E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 Pfam PF05231 MASE1 15 320 3.5E-21 T 28-03-2018 IPR007895 MASE1 CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 SMART SM00052 492 735 1.5E-90 T 28-03-2018 IPR001633 EAL domain CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 Gene3D G3DSA:3.20.20.450 494 743 2.4E-76 T 28-03-2018 IPR001633 EAL domain CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 SUPERFAMILY SSF141868 497 738 3.01E-71 T 28-03-2018 IPR001633 EAL domain CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 SMART SM00267 319 489 1.6E-4 T 28-03-2018 IPR000160 GGDEF domain CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 Pfam PF00563 EAL domain 498 730 3.0E-64 T 28-03-2018 IPR001633 EAL domain CO704_RS05145 be87739bf59a6a2e522e5eb2094a2f51 753 Gene3D G3DSA:3.30.70.270 313 466 0.0011 T 28-03-2018 CO704_RS13700 ecd18a5df8e7a13ebfb93a22f036d0c5 295 SUPERFAMILY SSF53474 17 291 1.29E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13700 ecd18a5df8e7a13ebfb93a22f036d0c5 295 Gene3D G3DSA:3.40.50.1820 23 295 4.7E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13700 ecd18a5df8e7a13ebfb93a22f036d0c5 295 Pfam PF00756 Putative esterase 35 206 1.9E-18 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 SUPERFAMILY SSF48008 79 212 1.75E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 SUPERFAMILY SSF46785 6 89 6.61E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 SMART SM00345 14 72 3.1E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 Pfam PF07729 FCD domain 82 203 3.9E-14 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 7.5E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 Gene3D G3DSA:1.10.10.10 2 68 4.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 Gene3D G3DSA:1.20.120.530 69 220 1.4E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS06015 ce2e279ccf4b04ff7d5b81b8db928285 220 SMART SM00895 82 204 5.7E-11 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS06995 7e1841744076673206d545be48712c79 221 Pfam PF01227 GTP cyclohydrolase I 40 218 2.5E-63 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CO704_RS06995 7e1841744076673206d545be48712c79 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CO704_RS06995 7e1841744076673206d545be48712c79 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 34.059 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CO704_RS06995 7e1841744076673206d545be48712c79 221 Gene3D G3DSA:3.30.1130.10 89 221 1.5E-46 T 28-03-2018 CO704_RS06995 7e1841744076673206d545be48712c79 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CO704_RS06995 7e1841744076673206d545be48712c79 221 SUPERFAMILY SSF55620 4 220 2.96E-77 T 28-03-2018 CO704_RS06995 7e1841744076673206d545be48712c79 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.5E-85 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CO704_RS06995 7e1841744076673206d545be48712c79 221 Gene3D G3DSA:1.10.286.10 7 85 5.2E-22 T 28-03-2018 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Gene3D G3DSA:3.40.50.970 1 212 7.9E-48 T 28-03-2018 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 196 8.0E-33 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Gene3D G3DSA:3.40.50.970 412 642 2.0E-42 T 28-03-2018 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Gene3D G3DSA:3.40.50.1220 213 386 4.3E-38 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS02610 287169f171caa144442028e25c9c22c6 642 SUPERFAMILY SSF52518 1 209 2.95E-33 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS02610 287169f171caa144442028e25c9c22c6 642 SUPERFAMILY SSF52518 415 630 4.29E-56 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 438 597 4.5E-42 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 640 7.5E-284 T 28-03-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 SUPERFAMILY SSF52467 185 367 9.2E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS02610 287169f171caa144442028e25c9c22c6 642 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 352 6.0E-30 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS02610 287169f171caa144442028e25c9c22c6 642 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 474 493 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 51.339 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 SUPERFAMILY SSF52402 1 214 5.95E-66 T 28-03-2018 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 206 5.4E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 PIRSF PIRSF006293 1 226 4.2E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 Pfam PF06508 Queuosine biosynthesis protein QueC 4 213 4.0E-83 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS18145 184359b922427b6b38478abe4682c7a5 231 Gene3D G3DSA:3.40.50.620 1 231 2.8E-52 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 SUPERFAMILY SSF53850 95 300 2.81E-37 T 28-03-2018 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 Gene3D G3DSA:3.40.190.10 191 274 5.2E-11 T 28-03-2018 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 5.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 Pfam PF03466 LysR substrate binding domain 102 302 4.8E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 SUPERFAMILY SSF46785 9 89 1.9E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 Gene3D G3DSA:3.40.190.10 102 190 1.7E-12 T 28-03-2018 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.8E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS16340 2dab91d4eb0ac66b712d67e706580ff8 306 Gene3D G3DSA:1.10.10.10 1 94 6.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 Gene3D G3DSA:1.10.10.10 132 215 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 SUPERFAMILY SSF52172 3 135 3.13E-21 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 Pfam PF00072 Response regulator receiver domain 6 120 1.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 SUPERFAMILY SSF46894 146 209 1.02E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.566 T 28-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 Gene3D G3DSA:3.40.50.2300 3 131 3.0E-21 T 28-03-2018 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 SMART SM00421 148 205 2.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 SMART SM00448 4 120 7.6E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS06730 be4ba8f999180471ff7f32e217d19451 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07200 c24e7ad173b2f55a93354b58844693bf 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS07200 c24e7ad173b2f55a93354b58844693bf 410 Gene3D G3DSA:1.20.1250.20 210 409 9.0E-11 T 28-03-2018 CO704_RS07200 c24e7ad173b2f55a93354b58844693bf 410 Pfam PF07690 Major Facilitator Superfamily 27 361 2.4E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07200 c24e7ad173b2f55a93354b58844693bf 410 SUPERFAMILY SSF103473 9 399 1.57E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07200 c24e7ad173b2f55a93354b58844693bf 410 Gene3D G3DSA:1.20.1250.20 8 204 1.3E-25 T 28-03-2018 CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 SUPERFAMILY SSF46955 3 90 7.78E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 Gene3D G3DSA:3.40.50.880 159 247 0.0013 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 Gene3D G3DSA:1.10.1660.10 1 109 7.9E-26 T 28-03-2018 CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 Pfam PF13411 MerR HTH family regulatory protein 4 72 7.0E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 SMART SM00422 4 73 2.4E-25 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS16220 084c95169d21cdba1b74a5dc65cc0f5c 251 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 1.1E-76 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 SUPERFAMILY SSF53633 1 256 1.26E-63 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 Gene3D G3DSA:3.40.1160.10 1 258 4.1E-47 T 28-03-2018 CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 27.439 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 Pfam PF00696 Amino acid kinase family 5 235 2.7E-40 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS23525 484744115958a1d3a7eba90a4df87d43 258 PIRSF PIRSF000728 1 258 5.2E-74 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 Gene3D G3DSA:3.30.420.40 1 237 3.4E-75 T 28-03-2018 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 5.6E-79 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 Gene3D G3DSA:3.30.420.40 238 481 1.1E-58 T 28-03-2018 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 SUPERFAMILY SSF53067 2 242 1.73E-71 T 28-03-2018 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.2E-184 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 PIRSF PIRSF000538 1 484 2.5E-134 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 SUPERFAMILY SSF53067 242 482 1.15E-62 T 28-03-2018 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS24350 0cc28afb452d94d7deb8dc4b685e0ac3 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 5.4E-32 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 838 1.2E-297 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 SUPERFAMILY SSF52374 403 647 2.82E-137 T 28-03-2018 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 SUPERFAMILY SSF52374 4 202 2.82E-137 T 28-03-2018 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 SUPERFAMILY SSF50677 204 403 6.91E-52 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Gene3D G3DSA:3.40.50.620 29 191 9.9E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Pfam PF08264 Anticodon-binding domain of tRNA 685 839 5.2E-25 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Gene3D G3DSA:3.90.740.10 205 501 1.0E-91 T 28-03-2018 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 6.9E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 6.9E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 6.9E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 6.9E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 6.9E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.22 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Gene3D G3DSA:1.10.730.10 578 794 6.3E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Pfam PF06827 Zinc finger found in FPG and IleRS 903 931 7.0E-10 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 7.7E-225 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 SUPERFAMILY SSF47323 652 934 4.67E-71 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 Gene3D G3DSA:3.30.2320.20 803 900 1.2E-14 T 28-03-2018 CO704_RS19880 ebaed8f4245e29c34d2a678df0951427 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.969 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.4E-41 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 Gene3D G3DSA:3.30.1440.10 1 179 1.1E-81 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 SUPERFAMILY SSF55282 4 179 7.77E-80 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01155 fd285c8c5820721064a13bd3b869c7ae 179 PIRSF PIRSF002161 1 179 3.3E-67 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS14380 223d91638e82387115cffa2a1bd30f4e 273 SUPERFAMILY SSF52467 42 270 1.11E-75 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS14380 223d91638e82387115cffa2a1bd30f4e 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 60.512 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CO704_RS14380 223d91638e82387115cffa2a1bd30f4e 273 Gene3D G3DSA:3.40.50.1220 37 272 7.0E-54 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS14380 223d91638e82387115cffa2a1bd30f4e 273 Pfam PF02146 Sir2 family 48 221 2.1E-52 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.9E-101 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 Gene3D G3DSA:3.20.20.70 1 255 1.3E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.707 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 Pfam PF00121 Triosephosphate isomerase 5 246 6.4E-93 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS23650 36c4fa6c0b872524986c02ab90800050 255 SUPERFAMILY SSF51351 1 250 8.12E-92 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 1.2E-36 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 Gene3D G3DSA:1.10.1040.10 161 290 6.8E-19 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 SUPERFAMILY SSF51735 1 160 1.97E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 SUPERFAMILY SSF48179 165 283 2.93E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 Gene3D G3DSA:3.40.50.720 1 160 2.3E-30 T 28-03-2018 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 282 8.3E-14 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CO704_RS10690 9a82a46c8ea1ddf1c9aa44b7f379cc34 290 PIRSF PIRSF000103 1 290 1.4E-73 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 PIRSF PIRSF002867 1 320 8.7E-100 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 SMART SM00448 187 312 3.1E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 Gene3D G3DSA:3.40.50.2300 174 322 6.3E-23 T 28-03-2018 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 Pfam PF01584 CheW-like domain 21 163 1.6E-28 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 Pfam PF00072 Response regulator receiver domain 190 310 3.2E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 SUPERFAMILY SSF52172 190 317 6.4E-23 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 Gene3D G3DSA:2.30.30.40 109 155 7.3E-6 T 28-03-2018 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 Gene3D G3DSA:2.40.50.180 45 108 1.2E-10 T 28-03-2018 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 SUPERFAMILY SSF50341 19 164 3.4E-24 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS24200 45f0d1e0e05f37c2123faac5c689d73f 322 SMART SM00260 17 161 9.4E-13 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS02225 e07fdc8c2ee8d00aa9a7f2c2539daf93 94 Gene3D G3DSA:1.10.260.40 7 83 4.5E-15 T 28-03-2018 CO704_RS02225 e07fdc8c2ee8d00aa9a7f2c2539daf93 94 Pfam PF13560 Helix-turn-helix domain 14 70 1.1E-7 T 28-03-2018 CO704_RS02225 e07fdc8c2ee8d00aa9a7f2c2539daf93 94 SMART SM00530 14 73 2.9E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS02225 e07fdc8c2ee8d00aa9a7f2c2539daf93 94 SUPERFAMILY SSF47413 6 77 1.41E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 1 99 2.4E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS13800 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 Pfam PF00384 Molybdopterin oxidoreductase 109 517 2.0E-21 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 755 1.9E-270 T 28-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 SUPERFAMILY SSF53706 48 631 4.84E-138 T 28-03-2018 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 Pfam PF01568 Molydopterin dinucleotide binding domain 642 749 1.3E-11 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 Gene3D G3DSA:3.40.50.740 338 615 4.2E-42 T 28-03-2018 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 Gene3D G3DSA:2.40.40.20 636 764 4.1E-25 T 28-03-2018 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 Gene3D G3DSA:3.40.50.740 110 337 4.3E-37 T 28-03-2018 CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 SUPERFAMILY SSF50692 639 758 7.91E-19 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS12550 f5b12a7929e9dd8a88dd56f0c1962c7f 765 PIRSF PIRSF000144 1 760 0.0 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF81665 619 660 9.94E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF81665 30 103 9.94E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF81665 208 299 9.94E-14 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Pfam PF00122 E1-E2 ATPase 114 282 7.1E-34 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.287 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 337 3.5E-37 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 602 1.8E-46 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Gene3D G3DSA:2.70.150.10 12 208 7.9E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Gene3D G3DSA:3.40.1110.10 316 442 5.5E-26 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF56784 293 317 1.48E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF56784 372 404 1.48E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF56784 435 559 1.48E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Gene3D G3DSA:3.40.50.1000 443 577 1.1E-33 T 28-03-2018 IPR023214 HAD-like domain CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 1.1E-35 T 28-03-2018 CO704_RS16750 54188522784072149c15e7aa93fb5fd8 682 SUPERFAMILY SSF81653 115 207 3.66E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 Gene3D G3DSA:2.40.170.20 155 659 1.2E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 146 8.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 SUPERFAMILY SSF56935 29 659 8.79E-99 T 28-03-2018 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 29 659 1.0E-175 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 659 3.5E-129 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 Gene3D G3DSA:2.170.130.10 23 154 4.8E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS13735 208607e8114df6a4b1a97c618e10fafb 659 Pfam PF00593 TonB dependent receptor 235 657 1.8E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.4E-135 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 SUPERFAMILY SSF51726 1 352 1.73E-120 T 28-03-2018 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 Gene3D G3DSA:3.20.20.210 1 355 1.8E-108 T 28-03-2018 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.2E-140 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CO704_RS22870 ef4cc3a3873db3faf0cec2b47c2ea10e 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.212 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CO704_RS06395 e0d32e7d835a12318d8ee9091231d5d9 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 1.1E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06395 e0d32e7d835a12318d8ee9091231d5d9 228 SUPERFAMILY SSF161098 7 205 1.83E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06395 e0d32e7d835a12318d8ee9091231d5d9 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 5.1E-20 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS06395 e0d32e7d835a12318d8ee9091231d5d9 228 Gene3D G3DSA:1.10.3720.10 3 224 1.9E-40 T 28-03-2018 CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 7.7E-83 T 28-03-2018 IPR001405 RadC protein CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 Gene3D G3DSA:3.40.140.10 100 225 4.2E-47 T 28-03-2018 CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 Pfam PF04002 RadC-like JAB domain 106 223 5.0E-45 T 28-03-2018 IPR025657 RadC-like JAB domain CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 SUPERFAMILY SSF47781 22 88 2.13E-8 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 Hamap MF_00018 UPF0758 protein YicR [yicR]. 5 225 50.029 T 28-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CO704_RS23815 7fcc66f22064873b824d9f6b4c3f8081 225 Gene3D G3DSA:1.10.150.20 46 87 3.0E-4 T 28-03-2018 CO704_RS25875 1bc4b5c6d51db7fa59590630a07e6555 670 SUPERFAMILY SSF52540 20 130 2.2E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS25875 1bc4b5c6d51db7fa59590630a07e6555 670 SUPERFAMILY SSF52540 379 573 2.2E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS25875 1bc4b5c6d51db7fa59590630a07e6555 670 Gene3D G3DSA:3.40.50.300 6 643 5.3E-14 T 28-03-2018 CO704_RS25875 1bc4b5c6d51db7fa59590630a07e6555 670 Pfam PF12532 Protein of unknown function (DUF3732) 466 666 3.9E-54 T 28-03-2018 IPR022205 Protein of unknown function DUF3732 CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 PIRSF PIRSF006755 1 225 7.0E-63 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 SUPERFAMILY SSF52540 1 210 7.31E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.106 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 Gene3D G3DSA:3.40.50.300 2 214 5.0E-46 T 28-03-2018 CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 3.5E-39 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS12645 41b859f1da66a38b1ca6e2cbddbe0e96 231 Pfam PF13500 AAA domain 4 207 3.4E-29 T 28-03-2018 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 3.9E-127 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 PIRSF PIRSF000382 2 753 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 Gene3D G3DSA:3.20.20.210 387 753 4.4E-130 T 28-03-2018 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 SUPERFAMILY SSF51726 391 751 4.97E-122 T 28-03-2018 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.481 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 4.3E-160 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 Gene3D G3DSA:3.20.20.210 3 386 9.6E-142 T 28-03-2018 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS23145 515c4a70f683d0440f5941a8bc2f34cd 753 SUPERFAMILY SSF51726 6 389 9.94E-114 T 28-03-2018 CO704_RS18295 a95b12a351de523881dfa968c376091a 323 Gene3D G3DSA:3.30.1330.10 1 142 3.0E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS18295 a95b12a351de523881dfa968c376091a 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 8.2E-10 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS18295 a95b12a351de523881dfa968c376091a 323 Gene3D G3DSA:3.90.650.10 145 323 1.7E-48 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS18295 a95b12a351de523881dfa968c376091a 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 7.7E-118 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CO704_RS18295 a95b12a351de523881dfa968c376091a 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 4.6E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS18295 a95b12a351de523881dfa968c376091a 323 PIRSF PIRSF005303 1 322 7.4E-89 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CO704_RS18295 a95b12a351de523881dfa968c376091a 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.136 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CO704_RS18295 a95b12a351de523881dfa968c376091a 323 SUPERFAMILY SSF55326 4 137 6.45E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS18295 a95b12a351de523881dfa968c376091a 323 SUPERFAMILY SSF56042 143 305 1.06E-40 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Pfam PF02929 Beta galactosidase small chain 753 1018 9.2E-60 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SUPERFAMILY SSF49303 221 333 2.71E-21 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Gene3D G3DSA:2.60.120.260 5 219 3.6E-63 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1023 17.351 T 28-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SUPERFAMILY SSF49303 621 725 4.32E-27 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 335 628 7.3E-120 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Gene3D G3DSA:2.60.40.10 625 728 2.8E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SUPERFAMILY SSF51445 334 624 2.39E-103 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Gene3D G3DSA:2.70.98.10 735 1023 2.3E-74 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Gene3D G3DSA:2.60.40.10 220 333 5.2E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Pfam PF16353 Domain of unknown function(DUF4981) 637 723 3.5E-16 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Pfam PF00703 Glycosyl hydrolases family 2 221 333 2.0E-11 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 447 461 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Gene3D G3DSA:3.20.20.80 334 624 2.4E-87 T 28-03-2018 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SUPERFAMILY SSF49785 15 219 1.84E-67 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 53 219 5.0E-64 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 385 410 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 1.5E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 PRINTS PR00132 Glycosyl hydrolase family 2 signature 447 462 1.5E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 PRINTS PR00132 Glycosyl hydrolase family 2 signature 531 546 1.5E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 PRINTS PR00132 Glycosyl hydrolase family 2 signature 375 393 1.5E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 PRINTS PR00132 Glycosyl hydrolase family 2 signature 344 358 1.5E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SMART SM01038 748 1021 7.1E-113 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CO704_RS11345 aa9a08b9c84ead17e6978280cf37835b 1023 SUPERFAMILY SSF74650 735 1020 1.88E-90 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 Gene3D G3DSA:3.40.190.10 92 175 1.1E-17 T 28-03-2018 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 Gene3D G3DSA:1.10.10.10 1 91 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 Gene3D G3DSA:3.40.190.10 176 263 6.8E-24 T 28-03-2018 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 Pfam PF03466 LysR substrate binding domain 87 289 6.5E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 SUPERFAMILY SSF46785 1 86 2.25E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 SUPERFAMILY SSF53850 90 294 4.81E-42 T 28-03-2018 CO704_RS22490 222ead3b3b567ae8efe46a6c00ac5ac5 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20900 2000c0c0dd55b6a18add1848faa7174e 354 SUPERFAMILY SSF56281 36 301 2.03E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS20900 2000c0c0dd55b6a18add1848faa7174e 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 6.8E-15 T 28-03-2018 CO704_RS20900 2000c0c0dd55b6a18add1848faa7174e 354 Gene3D G3DSA:3.60.15.10 1 337 8.4E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 SUPERFAMILY SSF52540 279 523 2.27E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Pfam PF00005 ABC transporter 26 184 5.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Pfam PF00005 ABC transporter 301 453 1.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Gene3D G3DSA:3.40.50.300 275 537 4.9E-72 T 28-03-2018 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Gene3D G3DSA:3.40.50.300 2 269 2.3E-73 T 28-03-2018 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 SMART SM00382 310 510 2.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 SMART SM00382 34 233 1.9E-22 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 270 0.002 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 535 0.0064 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS11750 d2ba6d9fc5881cb6a703c9973601e04f 539 SUPERFAMILY SSF52540 5 255 2.03E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 Gene3D G3DSA:3.90.25.10 207 248 2.6E-21 T 28-03-2018 CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 Gene3D G3DSA:3.90.25.10 249 372 4.1E-34 T 28-03-2018 CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 4.8E-177 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.518 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 Gene3D G3DSA:3.40.50.720 1 206 3.4E-26 T 28-03-2018 CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 SUPERFAMILY SSF51735 3 353 2.43E-89 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07480 983a324c29dcdcfc2c382f80306389e8 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 2.8E-161 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 5.6E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.8E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 Gene3D G3DSA:3.40.50.300 8 331 6.6E-79 T 28-03-2018 CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 SUPERFAMILY SSF52540 23 264 5.93E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 Pfam PF00005 ABC transporter 41 192 2.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS09880 c2c139a05e6fb08b30a2695d5e418625 334 SMART SM00382 49 242 2.8E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06215 3ab14d02b91fecf954815a5f4751149e 185 Pfam PF08534 Redoxin 42 164 5.5E-20 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CO704_RS06215 3ab14d02b91fecf954815a5f4751149e 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS06215 3ab14d02b91fecf954815a5f4751149e 185 Gene3D G3DSA:3.40.30.10 36 185 1.4E-25 T 28-03-2018 CO704_RS06215 3ab14d02b91fecf954815a5f4751149e 185 SUPERFAMILY SSF52833 50 178 8.74E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS06215 3ab14d02b91fecf954815a5f4751149e 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 9.1E-76 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 PIRSF PIRSF004750 4 281 4.7E-112 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 SUPERFAMILY SSF55620 178 265 1.85E-8 T 28-03-2018 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 132.106 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 Gene3D G3DSA:3.30.1130.10 19 132 1.2E-36 T 28-03-2018 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 Gene3D G3DSA:3.30.1130.10 142 281 3.3E-43 T 28-03-2018 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 20 129 5.6E-42 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 4.9E-113 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS25035 edc6dd8035e0d7eae9345ffd5427ebaf 281 Pfam PF14489 QueF-like protein 195 268 5.5E-25 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.6E-186 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.648 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 6.1E-130 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 Gene3D G3DSA:3.65.10.10 21 219 2.8E-51 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 Gene3D G3DSA:3.65.10.10 220 418 3.7E-50 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS01700 808ba8a0ae61622e426d421033ed20da 420 SUPERFAMILY SSF55205 1 417 5.4E-149 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 4.9E-93 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 Gene3D G3DSA:3.30.1330.30 1 76 4.4E-19 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 SUPERFAMILY SSF55315 2 76 2.94E-21 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 Gene3D G3DSA:3.40.1280.10 77 243 2.1E-50 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.8E-40 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 77 9.6E-20 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 SMART SM00967 4 80 4.0E-22 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.275 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CO704_RS20930 23a3e66cfb21e3171cc31db0f4f1b59e 243 SUPERFAMILY SSF75217 68 243 4.91E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS02365 65d062751f51e8a7d4c1e49a3613835c 334 Gene3D G3DSA:2.60.40.1090 184 333 1.2E-13 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS02365 65d062751f51e8a7d4c1e49a3613835c 334 SUPERFAMILY SSF49401 195 333 4.87E-13 T 28-03-2018 IPR008966 Adhesion domain CO704_RS02365 65d062751f51e8a7d4c1e49a3613835c 334 Pfam PF00419 Fimbrial protein 187 333 3.8E-18 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 SUPERFAMILY SSF52402 7 172 4.85E-45 T 28-03-2018 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 2.5E-139 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 51.193 T 28-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 Gene3D G3DSA:3.40.50.620 2 167 1.9E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 Pfam PF00764 Arginosuccinate synthase 10 397 2.3E-145 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 Gene3D G3DSA:1.20.5.470 369 402 7.7E-14 T 28-03-2018 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 SUPERFAMILY SSF69864 177 402 2.22E-88 T 28-03-2018 CO704_RS23520 f0f9528cc4457049bc1328847f51f3ce 405 Gene3D G3DSA:3.90.1260.10 168 359 3.7E-83 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Gene3D G3DSA:2.30.130.10 250 313 8.8E-15 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Gene3D G3DSA:3.30.2350.10 10 228 2.1E-79 T 28-03-2018 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 SUPERFAMILY SSF55120 10 246 1.78E-83 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 SUPERFAMILY SSF88697 251 310 7.45E-14 T 28-03-2018 IPR015947 PUA-like domain CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 1.4E-21 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 1.6E-18 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 7.0E-93 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.601 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS01815 f1f0c0c9123c1d014afbfbc080b25823 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 8.3E-57 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 SUPERFAMILY SSF53448 48 346 3.52E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 Pfam PF00483 Nucleotidyl transferase 124 345 1.4E-37 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 Pfam PF00571 CBS domain 66 106 0.0016 T 28-03-2018 IPR000644 CBS domain CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 Pfam PF00571 CBS domain 9 54 3.2E-7 T 28-03-2018 IPR000644 CBS domain CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 Gene3D G3DSA:3.90.550.10 115 349 3.6E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 SMART SM00116 70 117 6.4 T 28-03-2018 IPR000644 CBS domain CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 SMART SM00116 6 54 0.061 T 28-03-2018 IPR000644 CBS domain CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 SUPERFAMILY SSF54631 8 57 7.77E-8 T 28-03-2018 CO704_RS07565 837530beb37fe838d5c877e270ac3e45 352 Gene3D G3DSA:3.10.580.10 1 113 5.9E-17 T 28-03-2018 CO704_RS11135 c709bee649401cf931dc5aef7e402e26 211 Pfam PF04239 Protein of unknown function (DUF421) 88 189 1.5E-29 T 28-03-2018 IPR007353 Protein of unknown function DUF421 CO704_RS11135 c709bee649401cf931dc5aef7e402e26 211 Gene3D G3DSA:3.30.240.20 83 151 1.7E-17 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CO704_RS11135 c709bee649401cf931dc5aef7e402e26 211 Gene3D G3DSA:3.30.240.20 156 210 5.4E-8 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 Gene3D G3DSA:3.30.70.140 5 97 2.6E-34 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 148 7.1E-18 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 151 3.5E-67 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 Gene3D G3DSA:2.30.30.20 102 150 1.0E-17 T 28-03-2018 CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 3.0E-34 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 2.8E-30 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 SUPERFAMILY SSF57825 101 150 6.02E-15 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.562 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CO704_RS01955 88b7f285b0fd6bfc2dabc33621da3b2b 153 SUPERFAMILY SSF54893 2 100 3.27E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 SUPERFAMILY SSF51621 420 715 1.49E-96 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 SUPERFAMILY SSF55781 2 159 3.27E-30 T 28-03-2018 IPR029016 GAF domain-like CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 SMART SM00065 17 164 3.3E-28 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Gene3D G3DSA:3.30.450.40 1 173 1.8E-29 T 28-03-2018 IPR029016 GAF domain-like CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 SUPERFAMILY SSF47831 202 309 1.7E-25 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 SUPERFAMILY SSF52009 293 412 1.7E-24 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 1.9E-126 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 1.8E-24 T 28-03-2018 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 1.8E-24 T 28-03-2018 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.8E-24 T 28-03-2018 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 1.8E-24 T 28-03-2018 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Gene3D G3DSA:1.10.274.10 197 302 2.1E-28 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.1E-23 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Pfam PF01590 GAF domain 18 151 3.7E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Gene3D G3DSA:3.50.30.10 303 419 1.3E-18 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 1.8E-106 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Gene3D G3DSA:3.20.20.60 420 739 1.3E-85 T 28-03-2018 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CO704_RS03350 b51dc4afe2080a596559b14c8f91065a 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 2.8E-15 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 SMART SM00342 203 286 1.3E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 SUPERFAMILY SSF46689 188 237 7.89E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 Pfam PF12833 Helix-turn-helix domain 209 286 3.3E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 Gene3D G3DSA:1.10.10.60 242 289 5.6E-15 T 28-03-2018 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 Gene3D G3DSA:1.10.10.60 99 241 2.2E-16 T 28-03-2018 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.9E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.9E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 SUPERFAMILY SSF46689 239 287 9.86E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13065 f4f51fbb1bd1c61eed20ea62ec2c8c2a 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS12175 34d2dc275bdba3e3b62d7f5ced25c33b 584 Pfam PF05947 Type VI secretion system, TssF 6 581 4.4E-188 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS12175 34d2dc275bdba3e3b62d7f5ced25c33b 584 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 2.0E-169 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS12175 34d2dc275bdba3e3b62d7f5ced25c33b 584 PIRSF PIRSF028304 1 583 7.8E-160 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS13300 6127c30126e74d7772ef783c26ec9752 476 SUPERFAMILY SSF89550 142 353 1.88E-24 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CO704_RS13300 6127c30126e74d7772ef783c26ec9752 476 Gene3D G3DSA:3.20.20.140 136 322 9.1E-10 T 28-03-2018 CO704_RS21720 7e4084af63297d97ca92cb7b6b2bda7d 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 182 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21720 7e4084af63297d97ca92cb7b6b2bda7d 218 SUPERFAMILY SSF46894 147 201 5.44E-7 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS21720 7e4084af63297d97ca92cb7b6b2bda7d 218 Gene3D G3DSA:1.10.10.10 141 203 2.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00435 ce6d5d59e67d38bc4a4f028adb8b7e31 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 2.0E-66 T 28-03-2018 IPR003744 Queuosine precursor transporter CO704_RS00435 ce6d5d59e67d38bc4a4f028adb8b7e31 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 9.5E-37 T 28-03-2018 IPR003744 Queuosine precursor transporter CO704_RS21255 8d888f0f0eecc901c68cafe86fdcf9f1 266 Gene3D G3DSA:3.90.226.10 10 263 2.0E-26 T 28-03-2018 CO704_RS21255 8d888f0f0eecc901c68cafe86fdcf9f1 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 1.1E-95 T 28-03-2018 CO704_RS21255 8d888f0f0eecc901c68cafe86fdcf9f1 266 SUPERFAMILY SSF52096 21 210 7.46E-18 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS21255 8d888f0f0eecc901c68cafe86fdcf9f1 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 10 266 4.1E-93 T 28-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SUPERFAMILY SSF52540 13 232 1.29E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SUPERFAMILY SSF52540 573 596 6.09E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SUPERFAMILY SSF52540 477 542 6.09E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SUPERFAMILY SSF52540 39 88 6.09E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 Pfam PF06733 DEAD_2 177 247 1.1E-4 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 Gene3D G3DSA:3.40.50.300 17 423 3.3E-32 T 28-03-2018 CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SMART SM00491 474 603 1.2E-53 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 SMART SM00487 16 298 0.0045 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 Gene3D G3DSA:3.40.50.300 445 624 6.1E-12 T 28-03-2018 CO704_RS09185 8850ed1abade00234a5dd1a3d9b564ae 636 Pfam PF13307 Helicase C-terminal domain 459 616 2.4E-34 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CO704_RS00005 5e7d6fba73caf0c30f1276323c3a994a 226 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 171 1.7E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS00005 5e7d6fba73caf0c30f1276323c3a994a 226 SUPERFAMILY SSF56935 27 226 3.3E-32 T 28-03-2018 CO704_RS00005 5e7d6fba73caf0c30f1276323c3a994a 226 Gene3D G3DSA:2.40.170.20 181 226 5.6E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS00005 5e7d6fba73caf0c30f1276323c3a994a 226 Gene3D G3DSA:2.170.130.10 31 180 2.8E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS01345 0be7c49c2d11134c315c18f7e3355b99 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 5.6E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01345 0be7c49c2d11134c315c18f7e3355b99 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 154 252 9.0E-20 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS01345 0be7c49c2d11134c315c18f7e3355b99 367 Gene3D G3DSA:1.10.3720.10 17 354 7.7E-36 T 28-03-2018 CO704_RS01345 0be7c49c2d11134c315c18f7e3355b99 367 SUPERFAMILY SSF161098 154 346 6.67E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05510 6fcff2bae652258af624d9efd3ebfe32 228 Gene3D G3DSA:3.40.50.300 2 228 1.2E-60 T 28-03-2018 CO704_RS05510 6fcff2bae652258af624d9efd3ebfe32 228 SUPERFAMILY SSF52540 6 227 7.55E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05510 6fcff2bae652258af624d9efd3ebfe32 228 Pfam PF00005 ABC transporter 27 174 3.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05510 6fcff2bae652258af624d9efd3ebfe32 228 SMART SM00382 35 223 3.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05510 6fcff2bae652258af624d9efd3ebfe32 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 SUPERFAMILY SSF88659 201 283 9.91E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 1.1E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Pfam PF04545 Sigma-70, region 4 228 280 3.1E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Gene3D G3DSA:1.10.10.10 222 284 4.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Gene3D G3DSA:1.10.601.10 10 122 1.1E-33 T 28-03-2018 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 SUPERFAMILY SSF88946 15 122 8.79E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Pfam PF04542 Sigma-70 region 2 53 122 2.2E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.772 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 3.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 3.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 3.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 4.4E-129 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 40 4.7E-5 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00510 8c6190c8e4fdd1913893e6923b854835 284 PIRSF PIRSF000770 7 284 1.7E-34 T 28-03-2018 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 Gene3D G3DSA:3.10.20.70 45 154 2.1E-11 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 SUPERFAMILY SSF54368 46 152 5.23E-6 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 SMART SM01230 155 397 2.5E-64 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 278 293 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 SUPERFAMILY SSF55931 156 467 1.08E-71 T 28-03-2018 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 Gene3D G3DSA:3.30.590.10 155 470 5.1E-69 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CO704_RS16245 4b51d124fc66cb300cd05f4c5baaab4d 472 Pfam PF00120 Glutamine synthetase, catalytic domain 157 467 1.3E-71 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS05715 df803d2d5581acfbd703c5bf3b2f1fc4 87 Pfam PF03927 NapD protein 5 80 2.8E-25 T 28-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 Gene3D G3DSA:1.20.58.340 249 316 1.2E-20 T 28-03-2018 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 Gene3D G3DSA:1.20.58.340 131 248 9.0E-9 T 28-03-2018 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 3.9E-55 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 1.4E-108 T 28-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 SUPERFAMILY SSF143865 1 255 1.83E-37 T 28-03-2018 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 Gene3D G3DSA:3.30.460.20 1 125 7.9E-10 T 28-03-2018 CO704_RS23200 584fc3629eeafe35dae6b24f85a397ab 316 SUPERFAMILY SSF144083 251 314 2.62E-20 T 28-03-2018 CO704_RS14210 ff838fa0f07df1d9989a53a8a9909cf3 71 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 68 1.0E-22 T 28-03-2018 CO704_RS14210 ff838fa0f07df1d9989a53a8a9909cf3 71 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.7E-32 T 28-03-2018 IPR024493 Fumarase D CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 1.4E-15 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Gene3D G3DSA:3.30.300.30 465 570 1.8E-25 T 28-03-2018 CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Gene3D G3DSA:2.30.38.10 383 464 3.7E-29 T 28-03-2018 CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 SUPERFAMILY SSF56801 24 564 3.53E-152 T 28-03-2018 CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Gene3D G3DSA:3.40.50.980 31 227 7.2E-44 T 28-03-2018 CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 28-03-2018 IPR020845 AMP-binding, conserved site CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Gene3D G3DSA:3.40.50.980 228 382 3.7E-38 T 28-03-2018 CO704_RS09200 d3230788330eeb9cbd8e44bae72d3266 572 Pfam PF00501 AMP-binding enzyme 40 471 1.0E-111 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS14695 36cef39eefb6d0e4a2e013000e553070 307 Gene3D G3DSA:3.30.360.10 130 306 1.3E-23 T 28-03-2018 CO704_RS14695 36cef39eefb6d0e4a2e013000e553070 307 SUPERFAMILY SSF55347 123 264 3.92E-45 T 28-03-2018 CO704_RS14695 36cef39eefb6d0e4a2e013000e553070 307 SUPERFAMILY SSF51735 3 138 6.15E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14695 36cef39eefb6d0e4a2e013000e553070 307 Gene3D G3DSA:3.40.50.720 1 129 2.4E-31 T 28-03-2018 CO704_RS14695 36cef39eefb6d0e4a2e013000e553070 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 9.6E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.2E-26 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.4E-60 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 SUPERFAMILY SSF89360 1 96 5.36E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 6.1E-38 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-37 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS04920 342ee436a70f546bc6616bd54aec43f8 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 43.694 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82866 291 490 7.06E-49 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 136 182 1.31E-21 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 268 324 1.31E-21 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 555 650 1.24E-18 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 788 833 2.44E-6 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 664 701 2.44E-6 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:3.30.2090.10 181 269 1.3E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82866 811 1010 2.88E-41 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.8E-85 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:3.30.2090.10 701 788 2.2E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:3.30.70.1430 557 652 5.0E-15 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82693 40 135 3.14E-23 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:1.20.1640.10 281 503 3.7E-51 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:1.20.1640.10 801 1022 5.1E-34 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.05 T 28-03-2018 IPR023931 Multidrug resistance protein MdtC CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82714 703 785 9.55E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 Gene3D G3DSA:3.30.70.1430 40 142 5.1E-26 T 28-03-2018 CO704_RS07375 234330a650fad9d74cf99cdaee215406 1027 SUPERFAMILY SSF82714 183 266 7.32E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS08515 8a5af299495f7ff0953b6c1b0231604c 308 SUPERFAMILY SSF56059 92 286 2.53E-21 T 28-03-2018 CO704_RS08515 8a5af299495f7ff0953b6c1b0231604c 308 Gene3D G3DSA:3.40.50.20 2 107 1.9E-8 T 28-03-2018 CO704_RS08515 8a5af299495f7ff0953b6c1b0231604c 308 Pfam PF02655 ATP-grasp domain 100 260 1.9E-11 T 28-03-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 CO704_RS08515 8a5af299495f7ff0953b6c1b0231604c 308 Gene3D G3DSA:3.30.470.20 108 307 2.8E-21 T 28-03-2018 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 Pfam PF02254 TrkA-N domain 402 512 1.2E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 1.2E-89 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 SUPERFAMILY SSF51735 401 530 5.61E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 5.0E-62 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 Gene3D G3DSA:3.40.50.720 396 560 8.6E-26 T 28-03-2018 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 Gene3D G3DSA:1.20.91.10 232 310 5.0E-12 T 28-03-2018 CO704_RS19820 00848a516501f265ca73dcbdfaae2154 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 54.99 T 28-03-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 Pfam PF03466 LysR substrate binding domain 85 282 7.9E-44 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 Gene3D G3DSA:1.10.10.10 1 82 9.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 SUPERFAMILY SSF46785 1 109 3.59E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 SUPERFAMILY SSF53850 85 282 1.76E-37 T 28-03-2018 CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 Gene3D G3DSA:3.40.190.10 83 173 1.7E-19 T 28-03-2018 CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10785 2488852bc4e2596179185b9ff8c7622c 283 Gene3D G3DSA:3.40.190.10 174 255 6.8E-14 T 28-03-2018 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 64.99 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Gene3D G3DSA:1.10.443.10 112 292 4.4E-51 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 1.5E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 1.1E-120 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 SUPERFAMILY SSF47823 4 100 1.2E-35 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 SUPERFAMILY SSF56349 106 296 5.59E-59 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 58.008 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Pfam PF00589 Phage integrase family 113 283 1.8E-56 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS03095 32e8dc4ea67da4932906e7495717bf5c 298 Gene3D G3DSA:1.10.150.130 5 111 2.3E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.492 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 Gene3D G3DSA:3.40.50.720 2 181 2.8E-38 T 28-03-2018 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.1E-52 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 1.6E-41 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 Gene3D G3DSA:1.10.1040.10 193 339 1.1E-53 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 1.3E-49 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 SUPERFAMILY SSF48179 184 335 6.39E-58 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 SUPERFAMILY SSF51735 8 182 5.92E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23700 c781560e2b20177b1001e94ba433f7bb 339 PIRSF PIRSF000114 1 336 2.7E-99 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:2.10.230.10 507 556 0.0035 T 28-03-2018 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 SMART SM00382 23 402 0.41 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 SMART SM00382 448 695 0.31 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 SUPERFAMILY SSF52540 267 396 4.48E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 SUPERFAMILY SSF52540 8 115 4.48E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Pfam PF00005 ABC transporter 441 648 7.2E-12 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:3.40.50.300 275 405 6.5E-11 T 28-03-2018 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:1.10.8.280 139 249 3.0E-11 T 28-03-2018 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 SUPERFAMILY SSF52540 430 693 3.61E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:3.40.50.300 557 708 1.1E-20 T 28-03-2018 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:3.40.50.300 420 506 1.2E-7 T 28-03-2018 CO704_RS04150 0410ba914f8bb5358239d783edc3133c 709 Gene3D G3DSA:3.40.50.300 1 111 3.1E-6 T 28-03-2018 CO704_RS08970 ebd6f4360a5476878fae980717150a9a 223 SMART SM00479 1 156 1.6E-31 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS08970 ebd6f4360a5476878fae980717150a9a 223 Pfam PF00929 Exonuclease 4 147 1.4E-12 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS08970 ebd6f4360a5476878fae980717150a9a 223 SUPERFAMILY SSF53098 4 187 1.17E-31 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS08970 ebd6f4360a5476878fae980717150a9a 223 Gene3D G3DSA:3.30.420.10 1 156 2.4E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 Pfam PF00890 FAD binding domain 4 398 7.8E-57 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 SUPERFAMILY SSF51905 1 57 6.15E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 SUPERFAMILY SSF51905 248 411 6.15E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 SUPERFAMILY SSF51905 128 181 6.15E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 PIRSF PIRSF000141 1 417 2.5E-155 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.8E-6 T 28-03-2018 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 384 5.8E-6 T 28-03-2018 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 1.5E-159 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 414 44.873 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CO704_RS06680 472f9ff4157d5f30588bd7e94fc0fad2 421 Gene3D G3DSA:3.50.50.60 1 419 4.5E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 PIRSF PIRSF000386 1 253 7.7E-104 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 SUPERFAMILY SSF75217 2 248 6.54E-102 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.9E-72 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 234 2.6E-110 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 Gene3D G3DSA:1.10.1270.20 170 254 2.7E-36 T 28-03-2018 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 119.031 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CO704_RS04405 cf9efa09af269aca72049aa8f25a6e83 255 Gene3D G3DSA:3.40.1280.10 1 169 3.1E-72 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82866 802 1024 2.75E-44 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:3.30.70.1430 49 150 4.1E-23 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82866 299 498 1.44E-44 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82693 146 191 2.75E-21 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82693 277 333 2.75E-21 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.1E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82714 192 275 5.62E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82693 565 662 1.62E-16 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.655 T 28-03-2018 IPR022831 Multidrug resistance protein MdtB CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82714 719 800 1.7E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:1.20.1640.10 276 501 7.7E-45 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:1.20.1640.10 819 1025 4.6E-36 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:3.30.2090.10 190 275 1.7E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:3.30.2090.10 717 803 6.4E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 Gene3D G3DSA:3.30.70.1430 567 666 2.0E-14 T 28-03-2018 CO704_RS07380 746334b422d11e538b03fba4e3300593 1040 SUPERFAMILY SSF82693 49 138 3.14E-22 T 28-03-2018 CO704_RS14870 a82c1cd87821b1e088e2af9cdd075fed 245 SUPERFAMILY SSF89550 3 242 8.63E-64 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CO704_RS14870 a82c1cd87821b1e088e2af9cdd075fed 245 SMART SM00481 4 78 2.2E-17 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CO704_RS14870 a82c1cd87821b1e088e2af9cdd075fed 245 Gene3D G3DSA:3.20.20.140 1 245 6.8E-38 T 28-03-2018 CO704_RS14870 a82c1cd87821b1e088e2af9cdd075fed 245 Pfam PF02811 PHP domain 5 159 1.1E-7 T 28-03-2018 IPR004013 PHP domain GO:0003824 CO704_RS14870 a82c1cd87821b1e088e2af9cdd075fed 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.805 T 28-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 162 4.1E-21 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 SUPERFAMILY SSF47144 77 170 1.26E-28 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.4E-58 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 Gene3D G3DSA:1.10.287.110 1 85 2.2E-11 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 SUPERFAMILY SSF46565 1 74 7.46E-18 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 Pfam PF00226 DnaJ domain 2 70 3.3E-7 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 SMART SM00271 1 66 2.6E-8 T 28-03-2018 IPR001623 DnaJ domain CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.773 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS04925 5992f2f17f8ed44f77f4b7229cab45c7 171 Gene3D G3DSA:1.20.1280.20 86 168 2.3E-27 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82714 182 271 1.83E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.4E-115 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:3.30.2090.10 180 275 3.1E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:3.30.70.1440 673 770 4.6E-20 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:1.20.1640.10 826 1032 8.3E-37 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:3.30.70.1430 38 140 2.5E-30 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82866 296 497 4.05E-49 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:1.20.1640.10 287 510 1.4E-46 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82693 135 182 2.27E-28 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82693 274 330 2.27E-28 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82866 808 1032 6.67E-44 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 Gene3D G3DSA:3.30.70.1430 568 669 1.9E-20 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82693 566 670 3.03E-33 T 28-03-2018 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82714 724 811 1.02E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05355 19b0d25a1dda68adcd8231b17e72bea7 1049 SUPERFAMILY SSF82693 38 132 3.56E-28 T 28-03-2018 CO704_RS22525 cd8c669209dba464cefa2be9fe715ba0 535 Pfam PF00563 EAL domain 273 505 1.3E-67 T 28-03-2018 IPR001633 EAL domain CO704_RS22525 cd8c669209dba464cefa2be9fe715ba0 535 Gene3D G3DSA:3.20.20.450 270 520 2.3E-84 T 28-03-2018 IPR001633 EAL domain CO704_RS22525 cd8c669209dba464cefa2be9fe715ba0 535 Pfam PF12792 CSS motif domain associated with EAL 38 243 2.4E-34 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CO704_RS22525 cd8c669209dba464cefa2be9fe715ba0 535 SMART SM00052 267 511 9.0E-103 T 28-03-2018 IPR001633 EAL domain CO704_RS22525 cd8c669209dba464cefa2be9fe715ba0 535 SUPERFAMILY SSF141868 273 518 8.89E-80 T 28-03-2018 IPR001633 EAL domain CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 343 6.3E-11 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SUPERFAMILY SSF52540 168 488 5.29E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SUPERFAMILY SSF81923 11 125 5.76E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Gene3D G3DSA:1.10.8.60 744 840 6.4E-9 T 28-03-2018 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Gene3D G3DSA:1.10.1780.10 4 154 3.0E-18 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 578 596 1.6E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 685 699 1.6E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 1.6E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 623 641 1.6E-29 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Gene3D G3DSA:3.40.50.300 540 740 2.3E-30 T 28-03-2018 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Pfam PF07724 AAA domain (Cdc48 subfamily) 573 737 3.9E-40 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SMART SM00382 574 726 4.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SMART SM00382 206 352 9.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Gene3D G3DSA:3.40.50.300 165 350 7.3E-24 T 28-03-2018 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Gene3D G3DSA:1.10.8.60 351 524 3.9E-35 T 28-03-2018 CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SMART SM01086 744 834 6.7E-4 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 744 818 9.3E-7 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 SUPERFAMILY SSF52540 523 812 3.36E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17770 7a990cba87ec6126d165422fae33a653 841 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 816 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 SUPERFAMILY SSF89562 2 158 9.68E-44 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 3.1E-89 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.3E-62 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.157 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 Pfam PF03737 Aldolase/RraA 5 152 5.8E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS23610 3cfc5407fa2726ed9589fcdf7360ff5c 161 Gene3D G3DSA:3.50.30.40 1 159 6.6E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 Gene3D G3DSA:3.40.50.300 256 511 5.6E-39 T 28-03-2018 CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 Gene3D G3DSA:3.40.50.300 1 233 6.1E-50 T 28-03-2018 CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.2E-275 T 28-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 SUPERFAMILY SSF52540 258 486 7.17E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 SUPERFAMILY SSF52540 3 222 2.2E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 SMART SM00382 286 482 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 SMART SM00382 29 219 3.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 Pfam PF00005 ABC transporter 278 433 7.9E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24335 67118a9758787ec4db265aec154ba6f3 513 Pfam PF00005 ABC transporter 20 171 3.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Gene3D G3DSA:3.30.450.20 97 234 1.4E-18 T 28-03-2018 CO704_RS10420 7d830241857507407e6bbe612c016abc 663 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 6.7E-15 T 28-03-2018 IPR000014 PAS domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 8.1E-44 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Gene3D G3DSA:3.20.20.450 403 663 1.3E-88 T 28-03-2018 IPR001633 EAL domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 394 1.5E-35 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Pfam PF13426 PAS domain 123 225 3.8E-10 T 28-03-2018 IPR000014 PAS domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SUPERFAMILY SSF55785 124 234 2.42E-16 T 28-03-2018 IPR000014 PAS domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Gene3D G3DSA:3.30.70.270 235 402 7.5E-55 T 28-03-2018 CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SUPERFAMILY SSF55073 243 397 2.98E-44 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SMART SM00052 405 649 9.4E-119 T 28-03-2018 IPR001633 EAL domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 Pfam PF00563 EAL domain 412 644 8.1E-66 T 28-03-2018 IPR001633 EAL domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SMART SM00267 226 395 2.3E-64 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SMART SM00091 111 177 1.6E-4 T 28-03-2018 IPR000014 PAS domain CO704_RS10420 7d830241857507407e6bbe612c016abc 663 SUPERFAMILY SSF141868 412 658 1.83E-81 T 28-03-2018 IPR001633 EAL domain CO704_RS01275 d6d57bcd6b31cb7a3b72695fdf439e81 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.091 T 28-03-2018 IPR007456 Smg CO704_RS01275 d6d57bcd6b31cb7a3b72695fdf439e81 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 2.3E-59 T 28-03-2018 IPR007456 Smg CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Gene3D G3DSA:3.40.50.20 4 126 2.5E-50 T 28-03-2018 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 SMART SM00878 338 445 1.8E-57 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Pfam PF00364 Biotin-requiring enzyme 514 575 3.7E-8 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Gene3D G3DSA:2.40.50.100 506 576 2.9E-12 T 28-03-2018 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 SUPERFAMILY SSF51230 507 575 1.31E-11 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 3.8E-76 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Gene3D G3DSA:3.30.470.20 213 448 9.4E-94 T 28-03-2018 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.0E-42 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Pfam PF02785 Biotin carboxylase C-terminal domain 338 445 7.1E-37 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 Gene3D G3DSA:3.30.1490.20 127 212 3.3E-15 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 533 550 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 SUPERFAMILY SSF51246 332 446 6.28E-37 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 SUPERFAMILY SSF52440 4 116 4.1E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS06035 8f23ad8cd9c3a6e7f4fc7778fa109713 576 SUPERFAMILY SSF56059 86 326 3.18E-59 T 28-03-2018 CO704_RS14465 ccc4e290843afb8b65fad93d57ad77a8 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 104 3.6E-7 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS14465 ccc4e290843afb8b65fad93d57ad77a8 339 Gene3D G3DSA:3.40.50.720 1 205 2.1E-14 T 28-03-2018 CO704_RS14465 ccc4e290843afb8b65fad93d57ad77a8 339 SUPERFAMILY SSF51735 1 104 1.35E-14 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 Gene3D G3DSA:3.40.30.10 45 145 1.9E-23 T 28-03-2018 CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 Pfam PF02798 Glutathione S-transferase, N-terminal domain 46 127 2.2E-6 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 SUPERFAMILY SSF47616 181 259 2.23E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 SUPERFAMILY SSF47616 117 152 2.23E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 Pfam PF00043 Glutathione S-transferase, C-terminal domain 182 250 7.1E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 Gene3D G3DSA:1.20.1050.10 146 276 1.5E-26 T 28-03-2018 CO704_RS22235 cd8422b85282bbd9838bae9e645e6f5f 281 SUPERFAMILY SSF52833 37 131 3.58E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 1.4E-17 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 158 1.9E-6 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 Gene3D G3DSA:3.30.930.10 2 249 8.8E-70 T 28-03-2018 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 7.9E-128 T 28-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 Gene3D G3DSA:3.30.390.50 250 337 2.1E-23 T 28-03-2018 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 SUPERFAMILY SSF55681 3 247 5.39E-77 T 28-03-2018 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 SUPERFAMILY SSF82649 248 336 1.1E-23 T 28-03-2018 CO704_RS20080 0f38d0549dc5c8d575dcc0748e9225e2 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 58.199 T 28-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 CO704_RS25350 b20abaa9087ce60e2f7c1d8070b4aa21 906 Gene3D G3DSA:2.60.40.10 333 435 2.6E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 SUPERFAMILY SSF53850 1 242 5.03E-72 T 28-03-2018 CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 SMART SM00079 22 243 4.3E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 2.6E-68 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 Gene3D G3DSA:3.40.190.10 10 142 2.5E-36 T 28-03-2018 CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 SMART SM00062 22 243 9.6E-85 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 6.4E-91 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CO704_RS15810 bbe53c6e53dceb71788d8445ab6c7188 243 Gene3D G3DSA:3.40.190.10 143 243 2.0E-18 T 28-03-2018 CO704_RS10475 f860db20f9b2c3516d3b5d27e7e44829 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 73 6.0E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CO704_RS10475 f860db20f9b2c3516d3b5d27e7e44829 74 Pfam PF06667 Phage shock protein B 4 73 1.2E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 SUPERFAMILY SSF51905 1 310 3.06E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 Gene3D G3DSA:3.50.50.60 150 243 1.2E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 Gene3D G3DSA:3.50.50.60 1 149 1.6E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.5E-8 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 4.5E-8 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 288 4.5E-8 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-5 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.8E-5 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.8E-5 T 28-03-2018 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 Gene3D G3DSA:3.50.50.60 244 325 0.031 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10925 2723f376bddef73c948136c8480e7b34 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 3.5E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 Gene3D G3DSA:3.40.50.300 15 234 4.3E-43 T 28-03-2018 CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 Pfam PF00005 ABC transporter 18 161 1.4E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 3 247 45.064 T 28-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 SUPERFAMILY SSF52540 16 223 4.71E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13780 ebaa8a3a1a8776bce55575a89324d6f0 248 SMART SM00382 24 226 6.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 SUPERFAMILY SSF63380 1 93 8.33E-28 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 Gene3D G3DSA:2.40.30.20 94 193 3.3E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 PIRSF PIRSF000498 1 210 5.1E-75 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 SUPERFAMILY SSF63380 94 201 5.44E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 Pfam PF00677 Lumazine binding domain 3 87 1.1E-21 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 Pfam PF00677 Lumazine binding domain 100 185 1.7E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 Gene3D G3DSA:2.40.30.20 1 93 2.4E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS13575 c34101ff62741a8d3cae55dffcf0db98 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.9E-87 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 550 3.9E-47 T 28-03-2018 IPR000160 GGDEF domain CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 Gene3D G3DSA:3.30.70.270 381 555 3.5E-53 T 28-03-2018 CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 Gene3D G3DSA:3.30.450.20 37 237 0.0019 T 28-03-2018 CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 SUPERFAMILY SSF55073 396 553 1.96E-45 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 Pfam PF17151 Periplasmic sensor domain 35 219 1.6E-70 T 28-03-2018 IPR033416 Periplasmic sensor domain CHASE7 CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 SMART SM00267 380 554 3.7E-64 T 28-03-2018 IPR000160 GGDEF domain CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 387 553 5.2E-58 T 28-03-2018 IPR000160 GGDEF domain CO704_RS08355 ac6d9a5f7a5d5f431f28beb7b864e89d 555 Gene3D G3DSA:3.30.450.20 238 343 1.9E-8 T 28-03-2018 CO704_RS21045 4e6d2f22cf007e3e4bd8480af22ae88c 233 Gene3D G3DSA:2.60.120.10 12 135 8.1E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS21045 4e6d2f22cf007e3e4bd8480af22ae88c 233 Pfam PF02678 Pirin 5 119 5.7E-24 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CO704_RS21045 4e6d2f22cf007e3e4bd8480af22ae88c 233 SUPERFAMILY SSF51182 1 231 4.15E-45 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS21045 4e6d2f22cf007e3e4bd8480af22ae88c 233 PIRSF PIRSF006232 1 230 1.6E-33 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CO704_RS21045 4e6d2f22cf007e3e4bd8480af22ae88c 233 Gene3D G3DSA:2.60.120.10 138 233 1.9E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:3.90.1800.10 1267 1313 7.2E-12 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:3.90.1110.10 148 429 1.3E-66 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 3.2E-27 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:3.90.1100.10 430 645 8.4E-81 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.3E-14 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 3.0E-160 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:2.40.270.10 1021 1242 1.3E-80 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:2.40.50.100 715 795 4.0E-27 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 334 454 9.2E-16 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.337 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 SUPERFAMILY SSF64484 343 939 0.0 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 SUPERFAMILY SSF64484 11 226 0.0 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 28-03-2018 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.9E-57 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 Gene3D G3DSA:2.40.50.150 814 949 4.1E-29 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22935 59da40311eb922e0e46c92d9da35c6c9 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SMART SM00490 505 589 2.1E-22 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SUPERFAMILY SSF50249 9 176 3.31E-44 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SMART SM00487 265 459 8.9E-30 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Gene3D G3DSA:3.40.50.300 251 456 5.3E-35 T 28-03-2018 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 7.6E-245 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SUPERFAMILY SSF52540 508 653 9.72E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SUPERFAMILY SSF52540 292 342 9.72E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Gene3D G3DSA:3.40.50.300 457 630 2.4E-27 T 28-03-2018 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Gene3D G3DSA:1.10.150.20 3 50 0.0029 T 28-03-2018 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Gene3D G3DSA:2.40.50.140 51 141 4.6E-13 T 28-03-2018 CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Pfam PF17191 RecG wedge domain 15 171 8.9E-23 T 28-03-2018 IPR033454 RecG, wedge domain CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 2.8E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 SUPERFAMILY SSF52540 205 453 3.65E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23885 54a6b095d058a3509146b9878e6dc93e 693 Pfam PF00270 DEAD/DEAH box helicase 273 433 2.1E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 6.9E-58 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Gene3D G3DSA:1.10.1040.10 615 703 1.4E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Gene3D G3DSA:3.90.226.10 4 205 2.3E-58 T 28-03-2018 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 585 1.4E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 SUPERFAMILY SSF51735 308 490 5.14E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 SUPERFAMILY SSF48179 613 705 5.78E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 705 53.396 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 SUPERFAMILY SSF48179 492 601 4.25E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 705 0.0 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Gene3D G3DSA:3.40.50.720 252 490 1.2E-57 T 28-03-2018 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Gene3D G3DSA:1.10.1040.10 491 590 5.0E-26 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 SUPERFAMILY SSF52096 14 299 1.36E-66 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS06270 e87ec707ca6e2a81953ea90e906911cf 721 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 1.8E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS07395 9ec9b1ae8676baac5a2696e58bc5a39e 98 SMART SM00530 31 86 1.6E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07395 9ec9b1ae8676baac5a2696e58bc5a39e 98 Gene3D G3DSA:3.30.1190.10 50 98 9.3E-14 T 28-03-2018 CO704_RS07395 9ec9b1ae8676baac5a2696e58bc5a39e 98 Pfam PF13744 Helix-turn-helix domain 8 87 1.9E-14 T 28-03-2018 CO704_RS07395 9ec9b1ae8676baac5a2696e58bc5a39e 98 SUPERFAMILY SSF47413 20 93 2.17E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07395 9ec9b1ae8676baac5a2696e58bc5a39e 98 Gene3D G3DSA:1.10.10.60 15 49 1.4E-9 T 28-03-2018 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 14 332 6.6E-176 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 Gene3D G3DSA:3.40.190.10 24 134 9.6E-16 T 28-03-2018 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 SUPERFAMILY SSF53850 25 332 2.97E-82 T 28-03-2018 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 Gene3D G3DSA:3.40.190.10 135 335 6.5E-43 T 28-03-2018 CO704_RS05790 26397a340587ebfdd67272a2bfa1558b 338 Pfam PF13531 Bacterial extracellular solute-binding protein 37 286 1.9E-42 T 28-03-2018 CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 Gene3D G3DSA:3.40.50.300 819 1031 5.4E-10 T 28-03-2018 CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 SUPERFAMILY SSF52540 903 1038 1.96E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 SUPERFAMILY SSF52540 1 219 1.96E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 Gene3D G3DSA:3.40.50.300 1 212 2.2E-31 T 28-03-2018 CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 Pfam PF13558 Putative exonuclease SbcCD, C subunit 935 1005 6.2E-15 T 28-03-2018 CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 Pfam PF13555 P-loop containing region of AAA domain 25 66 4.6E-7 T 28-03-2018 CO704_RS18425 b3e8e433abe392a975cbf0887cb5c388 1051 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1041 1.1E-235 T 28-03-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 Pfam PF03471 Transporter associated domain 432 511 2.4E-17 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 Pfam PF03741 Integral membrane protein TerC family 14 203 2.6E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 SMART SM01091 431 512 1.8E-21 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 Gene3D G3DSA:3.10.580.10 281 428 2.4E-20 T 28-03-2018 CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 SUPERFAMILY SSF56176 432 519 5.45E-18 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 SUPERFAMILY SSF54631 288 422 9.98E-21 T 28-03-2018 CO704_RS09140 fd6fefa1cd7ea84358fdf60716ca08b2 520 Gene3D G3DSA:3.30.465.10 429 512 1.0E-18 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Gene3D G3DSA:3.40.50.300 441 651 5.0E-43 T 28-03-2018 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 3.0E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SUPERFAMILY SSF52540 168 426 1.12E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SMART SM01086 652 741 6.2E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SUPERFAMILY SSF81923 1 141 1.83E-58 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SMART SM00382 205 350 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SMART SM00382 486 635 1.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Gene3D G3DSA:1.10.8.60 652 757 3.9E-25 T 28-03-2018 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Gene3D G3DSA:1.10.8.60 350 420 1.1E-27 T 28-03-2018 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Gene3D G3DSA:3.40.50.300 164 349 6.6E-29 T 28-03-2018 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 7.9E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 SUPERFAMILY SSF52540 436 743 1.15E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 2.6E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 3.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 3.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 3.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 3.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Gene3D G3DSA:1.10.1780.10 1 143 7.8E-28 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 4.5E-25 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS15710 37b15ee707559b09f2d647bc7873a692 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CO704_RS01645 d7920fa9c7eca1b95058a7388cdc8e8f 190 PIRSF PIRSF028513 1 185 1.6E-41 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CO704_RS01645 d7920fa9c7eca1b95058a7388cdc8e8f 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 181 4.3E-54 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CO704_RS01645 d7920fa9c7eca1b95058a7388cdc8e8f 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 182 3.7E-53 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CO704_RS01645 d7920fa9c7eca1b95058a7388cdc8e8f 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 184 27.064 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CO704_RS01645 d7920fa9c7eca1b95058a7388cdc8e8f 190 Gene3D G3DSA:2.60.450.10 24 146 2.1E-6 T 28-03-2018 CO704_RS11605 02d95ec660ba862c860d1f8d54440511 440 Pfam PF13416 Bacterial extracellular solute-binding protein 49 364 2.5E-41 T 28-03-2018 CO704_RS11605 02d95ec660ba862c860d1f8d54440511 440 Gene3D G3DSA:3.40.190.10 147 437 7.9E-47 T 28-03-2018 CO704_RS11605 02d95ec660ba862c860d1f8d54440511 440 SUPERFAMILY SSF53850 39 424 2.02E-75 T 28-03-2018 CO704_RS11635 f13179853d7fb6329aba7e8e5c18a89e 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 265 1.9E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11635 f13179853d7fb6329aba7e8e5c18a89e 271 Gene3D G3DSA:1.10.3720.10 10 263 9.9E-41 T 28-03-2018 CO704_RS11635 f13179853d7fb6329aba7e8e5c18a89e 271 SUPERFAMILY SSF161098 6 265 5.7E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22065 6f1927b1bf55ccacf429966323309cca 531 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 227 488 7.6E-77 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CO704_RS22065 6f1927b1bf55ccacf429966323309cca 531 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 488 1.5E-107 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CO704_RS22065 6f1927b1bf55ccacf429966323309cca 531 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 3.1E-24 T 28-03-2018 IPR010657 ImpA, N-terminal CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Gene3D G3DSA:2.40.50.140 356 417 1.7E-22 T 28-03-2018 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 792 2.7E-171 T 28-03-2018 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Pfam PF00912 Transglycosylase 63 237 1.8E-64 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Gene3D G3DSA:1.10.3810.10 55 254 6.6E-83 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Gene3D G3DSA:3.40.710.10 418 807 1.3E-92 T 28-03-2018 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 SUPERFAMILY SSF56601 430 618 1.94E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 SUPERFAMILY SSF56601 219 241 1.94E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 SUPERFAMILY SSF56601 680 840 1.94E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 SUPERFAMILY SSF56601 270 321 1.94E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Pfam PF00905 Penicillin binding protein transpeptidase domain 437 618 7.5E-24 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 Pfam PF17092 Penicillin-binding protein OB-like domain 324 433 1.0E-30 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CO704_RS00800 b60265cbfbf16f1908c46d2e56566fc6 858 SUPERFAMILY SSF53955 51 265 1.72E-80 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.8E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.8E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 2.8E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 2.8E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 Gene3D G3DSA:3.40.50.150 156 270 3.7E-16 T 28-03-2018 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 Gene3D G3DSA:1.10.1020.10 57 155 8.9E-33 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 PIRSF PIRSF000398 1 273 7.8E-69 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 SUPERFAMILY SSF53335 5 268 4.15E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 241 2.4E-73 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS00850 3b9a6e430281c8b059f0b437d77b7734 274 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.7E-100 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 159 1.1E-66 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 115 132 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 SUPERFAMILY SSF51230 84 159 6.81E-26 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 88 101 2.5E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 105 119 2.5E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 120 133 2.5E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 Gene3D G3DSA:2.40.50.100 4 159 8.4E-20 T 28-03-2018 CO704_RS01395 322a11d85da79b7425e01fab6641ea4b 159 Pfam PF00364 Biotin-requiring enzyme 86 158 1.6E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS13030 dd2f38b659c686a2714a222bb7476c3d 298 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 64.661 T 28-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 CO704_RS13030 dd2f38b659c686a2714a222bb7476c3d 298 Pfam PF01522 Polysaccharide deacetylase 15 167 4.3E-8 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CO704_RS13030 dd2f38b659c686a2714a222bb7476c3d 298 SUPERFAMILY SSF88713 85 274 1.0E-24 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS13030 dd2f38b659c686a2714a222bb7476c3d 298 SUPERFAMILY SSF88713 14 41 1.0E-24 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS13030 dd2f38b659c686a2714a222bb7476c3d 298 Gene3D G3DSA:3.20.20.370 2 268 4.4E-23 T 28-03-2018 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 SUPERFAMILY SSF55681 12 320 3.19E-81 T 28-03-2018 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 Gene3D G3DSA:3.30.930.10 9 324 1.4E-68 T 28-03-2018 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.518 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 2.1E-47 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 2.5E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 2.5E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS21315 8e47a685e555c1d34b20cb78ddb156b7 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.6E-132 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 Gene3D G3DSA:3.40.50.2300 2 130 3.5E-27 T 28-03-2018 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 4.5E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 SMART SM00448 2 112 2.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 Gene3D G3DSA:1.10.10.10 131 240 5.0E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 SUPERFAMILY SSF52172 2 126 2.7E-30 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 SMART SM00862 157 233 7.2E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS13225 4563372a736e26637b80cbd980edb99d 242 SUPERFAMILY SSF46894 135 234 3.12E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 Gene3D G3DSA:1.10.760.10 149 286 1.1E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 Gene3D G3DSA:1.10.760.10 287 400 2.1E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 Gene3D G3DSA:1.10.760.10 14 134 1.0E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 Pfam PF00034 Cytochrome c 23 118 1.5E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 SUPERFAMILY SSF46626 172 282 2.55E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 292 376 1.4E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 PIRSF PIRSF000018 11 400 1.7E-128 T 28-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 SUPERFAMILY SSF46626 18 119 1.15E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS06075 0ab3c5903afcdaa3c9a12aca67a96e04 400 SUPERFAMILY SSF46626 288 392 2.95E-22 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 PIRSF PIRSF000521 31 423 2.1E-28 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 Gene3D G3DSA:3.90.1150.10 198 257 0.0049 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 Gene3D G3DSA:3.90.1150.10 258 423 2.1E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 SUPERFAMILY SSF53383 3 422 1.25E-138 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.669 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 Pfam PF00202 Aminotransferase class-III 26 420 1.2E-132 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 Gene3D G3DSA:3.90.1150.10 4 197 1.1E-47 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS16485 c8075235d5f8befc23cd98d89650b499 428 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 1.3E-183 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 530 542 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 SUPERFAMILY SSF55604 6 79 9.02E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 SUPERFAMILY SSF51261 462 601 1.2E-49 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 Gene3D G3DSA:2.70.70.10 460 615 7.1E-54 T 28-03-2018 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 Pfam PF02378 Phosphotransferase system, EIIC 108 388 5.4E-26 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 Pfam PF00367 phosphotransferase system, EIIB 8 37 8.0E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 467 591 3.5E-47 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 Gene3D G3DSA:3.30.1360.60 4 79 4.2E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 608 5.9E-212 T 28-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 CO704_RS16350 8058bd4dd696cbd2866c6bbfa1a09698 615 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 468 588 1.7E-42 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 129 7.5E-29 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 Gene3D G3DSA:3.40.50.10330 5 133 1.7E-29 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 3.2E-100 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 299 45.831 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 8 298 7.1E-137 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 SUPERFAMILY SSF111331 8 296 3.49E-73 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CO704_RS07345 6f79a66c45ea43aa6a12d1034ede56a1 299 SMART SM00046 6 133 7.9E-22 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 4 144 6.0E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS00970 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 3.0E-139 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 PIRSF PIRSF006278 1 328 3.8E-95 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 SUPERFAMILY SSF53686 7 326 1.83E-85 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 73.391 T 28-03-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 1.6E-53 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 Gene3D G3DSA:3.40.50.1100 145 327 5.8E-28 T 28-03-2018 CO704_RS08535 30c7b63f1b57280efc94e49543397c77 328 Gene3D G3DSA:3.40.50.1100 50 144 9.0E-30 T 28-03-2018 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 Gene3D G3DSA:1.20.1260.10 2 167 9.5E-41 T 28-03-2018 IPR012347 Ferritin-related CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 SUPERFAMILY SSF47240 10 167 3.69E-50 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.7E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.7E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.7E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 PIRSF PIRSF005900 8 167 1.4E-44 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 48.544 T 28-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CO704_RS15970 9c405d629002d93265e516fdc7bacde0 167 Pfam PF00210 Ferritin-like domain 30 166 2.9E-23 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CO704_RS08835 38d764385a8317635c121d1e4a3dbb71 188 Pfam PF00857 Isochorismatase family 9 182 8.3E-38 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS08835 38d764385a8317635c121d1e4a3dbb71 188 SUPERFAMILY SSF52499 3 188 3.4E-50 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS08835 38d764385a8317635c121d1e4a3dbb71 188 Gene3D G3DSA:3.40.50.850 1 188 1.0E-45 T 28-03-2018 CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 Gene3D G3DSA:3.90.230.10 172 438 2.6E-89 T 28-03-2018 CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 SUPERFAMILY SSF53092 1 174 6.28E-52 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 Gene3D G3DSA:3.40.350.10 1 171 2.7E-46 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 Pfam PF00557 Metallopeptidase family M24 181 411 3.3E-66 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 SMART SM01011 1 136 5.8E-57 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 SUPERFAMILY SSF55920 175 433 1.83E-88 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS02995 45f71f66d3c79b0f7b0f865bfc8b9d77 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 126 1.5E-34 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 SUPERFAMILY SSF64383 180 312 1.1E-48 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 Gene3D G3DSA:3.30.1400.10 180 312 3.6E-56 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 182 317 8.0E-66 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 309 7.2E-97 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 SMART SM00771 179 309 1.1E-76 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 311 25.236 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CO704_RS05850 8a4e5927484ae18ac839dc514f6eb7ec 317 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 182 308 1.1E-50 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.517 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 SUPERFAMILY SSF102114 6 313 2.35E-94 T 28-03-2018 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 SMART SM00876 220 312 3.0E-49 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 9.8E-125 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 SMART SM00729 43 255 8.1E-41 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 Pfam PF04055 Radical SAM superfamily 50 201 2.0E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 9.1E-21 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 PIRSF PIRSF001619 1 319 1.7E-139 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS16480 5921d55c09daa95339a60d82fbbda628 346 Gene3D G3DSA:3.20.20.70 4 315 4.6E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 Pfam PF00005 ABC transporter 340 473 3.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 Pfam PF00005 ABC transporter 22 191 1.5E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 Gene3D G3DSA:3.40.50.300 12 289 1.6E-55 T 28-03-2018 CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.5E-294 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 SUPERFAMILY SSF52540 301 526 3.3E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 Gene3D G3DSA:3.40.50.300 290 551 6.2E-57 T 28-03-2018 CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 SUPERFAMILY SSF52540 11 243 3.67E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 SMART SM00382 31 236 5.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 SMART SM00382 348 522 3.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20055 7df01485871b5918cefe1f99869a6e52 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18570 8df90bb96b5cfbf300e79a2763d596e1 300 SUPERFAMILY SSF103481 42 148 1.7E-6 T 28-03-2018 CO704_RS18570 8df90bb96b5cfbf300e79a2763d596e1 300 SUPERFAMILY SSF103481 191 294 8.76E-13 T 28-03-2018 CO704_RS18570 8df90bb96b5cfbf300e79a2763d596e1 300 Pfam PF00892 EamA-like transporter family 6 145 1.5E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS18570 8df90bb96b5cfbf300e79a2763d596e1 300 Pfam PF00892 EamA-like transporter family 157 290 9.3E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 Pfam PF13091 PLD-like domain 257 394 9.0E-21 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 Gene3D G3DSA:3.30.870.10 249 416 7.8E-16 T 28-03-2018 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 SMART SM00155 133 159 0.0047 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 SMART SM00155 352 379 1.6E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 Gene3D G3DSA:3.30.870.10 14 235 2.2E-17 T 28-03-2018 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 SUPERFAMILY SSF56024 252 393 2.42E-17 T 28-03-2018 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 SUPERFAMILY SSF56024 9 190 6.28E-25 T 28-03-2018 CO704_RS04510 5aa8db0f580aea4a64db8eb3e07486f8 451 PIRSF PIRSF000850 1 451 4.5E-253 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 SUPERFAMILY SSF52540 72 152 2.1E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 SUPERFAMILY SSF52540 188 372 2.1E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.1E-99 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 SUPERFAMILY SSF116878 379 454 1.22E-50 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 SUPERFAMILY SSF116878 121 220 1.22E-50 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 368 3.7E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Gene3D G3DSA:3.30.1360.120 1 121 1.1E-40 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.4E-34 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Gene3D G3DSA:1.20.120.430 282 454 4.9E-34 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.241 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Pfam PF01926 50S ribosome-binding GTPase 218 309 1.5E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Gene3D G3DSA:1.20.120.430 122 281 7.0E-28 T 28-03-2018 CO704_RS24670 53096cd2c232cdd0933ff4356c1e18ab 454 Pfam PF12631 MnmE helical domain 123 451 7.3E-60 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CO704_RS05945 da4a8057d54143d3b485223e1faa7050 395 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 6.0E-20 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CO704_RS05945 da4a8057d54143d3b485223e1faa7050 395 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 393 4.4E-139 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CO704_RS05945 da4a8057d54143d3b485223e1faa7050 395 Pfam PF07670 Nucleoside recognition 92 190 1.2E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS05945 da4a8057d54143d3b485223e1faa7050 395 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 1.9E-57 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CO704_RS04775 cae4642d7625e8d245db590326c88c14 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 49.082 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CO704_RS04775 cae4642d7625e8d245db590326c88c14 167 Gene3D G3DSA:3.40.140.10 2 161 4.5E-52 T 28-03-2018 CO704_RS04775 cae4642d7625e8d245db590326c88c14 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CO704_RS04775 cae4642d7625e8d245db590326c88c14 167 SUPERFAMILY SSF53927 7 157 4.35E-58 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS04775 cae4642d7625e8d245db590326c88c14 167 Pfam PF14437 MafB19-like deaminase 7 153 1.0E-32 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CO704_RS06275 c91e7945fff575935fee6ac5fbde29b2 162 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 72 2.0E-6 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS06275 c91e7945fff575935fee6ac5fbde29b2 162 Gene3D G3DSA:3.40.50.1240 1 160 6.3E-17 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS06275 c91e7945fff575935fee6ac5fbde29b2 162 SUPERFAMILY SSF53254 1 132 1.71E-15 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS06275 c91e7945fff575935fee6ac5fbde29b2 162 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 2.3E-53 T 28-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 405 6.7E-101 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 Pfam PF01546 Peptidase family M20/M25/M40 143 403 2.1E-10 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 SUPERFAMILY SSF55031 212 322 2.97E-32 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 PIRSF PIRSF037215 4 409 1.1E-147 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 Pfam PF07687 Peptidase dimerisation domain 209 309 2.2E-7 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 Gene3D G3DSA:3.40.630.10 4 409 1.1E-42 T 28-03-2018 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 SUPERFAMILY SSF53187 7 213 2.73E-71 T 28-03-2018 CO704_RS13110 851d95a1337a342e12536cca02eb22b5 409 SUPERFAMILY SSF53187 325 407 2.73E-71 T 28-03-2018 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 Gene3D G3DSA:1.10.10.10 1 91 1.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 SUPERFAMILY SSF46785 1 86 2.82E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 Gene3D G3DSA:3.40.190.10 175 263 2.0E-13 T 28-03-2018 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 Gene3D G3DSA:3.40.190.10 92 174 5.7E-12 T 28-03-2018 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 SUPERFAMILY SSF53850 89 281 8.1E-24 T 28-03-2018 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 Pfam PF03466 LysR substrate binding domain 88 272 5.8E-24 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09155 29abed2779a8d19cb1242799bf85fded 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 Gene3D G3DSA:3.30.1730.10 8 170 1.4E-49 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 167 1.1E-51 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 Pfam PF01048 Phosphorylase superfamily 269 431 2.7E-19 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 Hamap MF_01932 AMP nucleosidase [amn]. 5 484 59.579 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 SUPERFAMILY SSF53167 11 484 1.29E-156 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 13 484 6.8E-237 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CO704_RS07895 9653f65be7556018e47f961738b925a2 484 Gene3D G3DSA:3.40.50.1580 174 467 5.7E-70 T 28-03-2018 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 Gene3D G3DSA:1.20.1560.10 1 325 1.8E-32 T 28-03-2018 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.8E-172 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 Pfam PF00664 ABC transporter transmembrane region 37 286 2.1E-12 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 SUPERFAMILY SSF90123 7 327 5.89E-41 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 Gene3D G3DSA:3.40.50.300 326 572 2.2E-70 T 28-03-2018 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 Pfam PF00005 ABC transporter 356 502 1.9E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 SUPERFAMILY SSF52540 333 571 4.55E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15690 3b752f6d4ef7dc215ee115bec5df785c 573 SMART SM00382 365 549 4.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 SUPERFAMILY SSF48179 203 301 1.19E-33 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 SMART SM00984 320 424 3.1E-50 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 7.7E-140 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 SUPERFAMILY SSF52413 309 435 2.62E-40 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 PIRSF PIRSF000124 1 439 2.7E-152 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 PIRSF PIRSF500134 1 442 6.3E-193 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 SUPERFAMILY SSF51735 1 195 1.92E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Gene3D G3DSA:1.20.5.170 204 227 1.6E-14 T 28-03-2018 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Gene3D G3DSA:3.40.50.720 228 436 6.9E-73 T 28-03-2018 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 9.3E-39 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Gene3D G3DSA:3.40.50.720 1 202 2.9E-60 T 28-03-2018 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 4.4E-30 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS09835 ee7e2b18e90ce4d1bb19737d3b467923 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 9.4E-66 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS19190 d3d12dcd6392646d6ffdf24c6f891d02 140 Pfam PF00472 RF-1 domain 7 132 2.7E-25 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CO704_RS19190 d3d12dcd6392646d6ffdf24c6f891d02 140 SUPERFAMILY SSF75620 7 113 1.1E-15 T 28-03-2018 CO704_RS19190 d3d12dcd6392646d6ffdf24c6f891d02 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CO704_RS19190 d3d12dcd6392646d6ffdf24c6f891d02 140 Gene3D G3DSA:3.30.160.20 1 140 3.3E-40 T 28-03-2018 CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 Gene3D G3DSA:3.10.129.10 2 116 1.2E-43 T 28-03-2018 CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 Pfam PF13622 Thioesterase-like superfamily 33 282 3.4E-58 T 28-03-2018 CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 SUPERFAMILY SSF54637 116 283 6.97E-56 T 28-03-2018 IPR029069 HotDog domain CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 SUPERFAMILY SSF54637 5 114 1.18E-42 T 28-03-2018 IPR029069 HotDog domain CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 Gene3D G3DSA:3.10.129.10 131 286 8.6E-53 T 28-03-2018 CO704_RS18100 85d49984ce8a278a612e65f92e7e14e6 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 6.6E-102 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 CO704_RS09435 e76616b486ac2d83eb4ae917bdc8ac50 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 5.2E-72 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS09435 e76616b486ac2d83eb4ae917bdc8ac50 253 SUPERFAMILY SSF52096 2 253 1.85E-80 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS09435 e76616b486ac2d83eb4ae917bdc8ac50 253 Gene3D G3DSA:1.10.12.10 197 253 4.3E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal CO704_RS09435 e76616b486ac2d83eb4ae917bdc8ac50 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS09435 e76616b486ac2d83eb4ae917bdc8ac50 253 Gene3D G3DSA:3.90.226.10 1 196 3.3E-63 T 28-03-2018 CO704_RS22770 0abfe4bb1d34c10a2edb2c65f4b84d48 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 17 103 9.0E-14 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CO704_RS22770 0abfe4bb1d34c10a2edb2c65f4b84d48 104 Pfam PF01845 CcdB protein 3 103 5.7E-27 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CO704_RS22770 0abfe4bb1d34c10a2edb2c65f4b84d48 104 Gene3D G3DSA:2.30.30.110 3 103 2.8E-18 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CO704_RS22770 0abfe4bb1d34c10a2edb2c65f4b84d48 104 SUPERFAMILY SSF50118 3 104 5.23E-22 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 SUPERFAMILY SSF46689 280 329 3.63E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 SMART SM00342 243 326 3.5E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 Pfam PF01965 DJ-1/PfpI family 50 187 6.0E-15 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 Gene3D G3DSA:1.10.10.60 245 282 4.0E-13 T 28-03-2018 CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 SUPERFAMILY SSF52317 20 208 1.8E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 Gene3D G3DSA:3.40.50.880 15 244 9.5E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 SUPERFAMILY SSF46689 227 277 1.25E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 Pfam PF12833 Helix-turn-helix domain 249 327 9.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11940 b3a7ae6616636395ffbaa6d74268aac4 334 Gene3D G3DSA:1.10.10.60 283 334 3.1E-12 T 28-03-2018 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 Pfam PF00005 ABC transporter 37 188 2.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 Gene3D G3DSA:3.40.50.300 8 334 1.8E-78 T 28-03-2018 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 324 4.8E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 SMART SM00382 46 238 4.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 3.6E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS24490 fe9c881748f1e59e621e58fee263bdf7 335 SUPERFAMILY SSF52540 16 260 7.06E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05520 5c07b1f44d179a4f09e0f3bb685c2220 383 Gene3D G3DSA:2.40.160.10 14 383 4.4E-32 T 28-03-2018 CO704_RS05520 5c07b1f44d179a4f09e0f3bb685c2220 383 SUPERFAMILY SSF56935 46 383 1.18E-30 T 28-03-2018 CO704_RS05520 5c07b1f44d179a4f09e0f3bb685c2220 383 Pfam PF03797 Autotransporter beta-domain 217 318 3.3E-7 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 SUPERFAMILY SSF54211 5 115 3.29E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 Gene3D G3DSA:3.30.230.10 1 119 8.7E-33 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 7.0E-45 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 Pfam PF00825 Ribonuclease P 6 111 5.2E-33 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 1.5E-36 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CO704_RS24685 25cb20b8355bd6932939dc6f7b7c1c5e 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.703 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Gene3D G3DSA:1.10.10.60 383 440 1.2E-8 T 28-03-2018 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Gene3D G3DSA:3.40.50.300 146 309 1.0E-26 T 28-03-2018 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 SMART SM00448 7 118 2.1E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 SMART SM00382 157 300 1.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 SUPERFAMILY SSF52172 5 181 2.42E-43 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Gene3D G3DSA:3.40.50.2300 1 145 2.6E-36 T 28-03-2018 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Gene3D G3DSA:1.10.8.60 310 382 3.7E-21 T 28-03-2018 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 SUPERFAMILY SSF46689 350 438 1.12E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Pfam PF00072 Response regulator receiver domain 10 118 2.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 SUPERFAMILY SSF52540 137 380 4.07E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04800 316a2893e21ebee29811e2ef27041caa 445 Pfam PF00158 Sigma-54 interaction domain 137 303 1.6E-71 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS01045 f0e8673e6d7cf8320f8b2c242bf6eb71 119 Gene3D G3DSA:3.40.1260.10 1 119 6.3E-22 T 28-03-2018 CO704_RS01045 f0e8673e6d7cf8320f8b2c242bf6eb71 119 SUPERFAMILY SSF75169 1 119 5.23E-38 T 28-03-2018 IPR027396 DsrEFH-like CO704_RS01045 f0e8673e6d7cf8320f8b2c242bf6eb71 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 1.8E-48 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF CO704_RS01045 f0e8673e6d7cf8320f8b2c242bf6eb71 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.597 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF CO704_RS01045 f0e8673e6d7cf8320f8b2c242bf6eb71 119 Pfam PF02635 DsrE/DsrF-like family 2 119 4.3E-26 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CO704_RS07535 b44eeda0d786640bd5b549f5f4190567 299 Gene3D G3DSA:3.90.550.10 1 299 3.7E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07535 b44eeda0d786640bd5b549f5f4190567 299 Pfam PF00483 Nucleotidyl transferase 5 274 4.8E-22 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS07535 b44eeda0d786640bd5b549f5f4190567 299 SUPERFAMILY SSF53448 2 285 6.31E-57 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS21945 bfd9e12a0990cc8b64314f28597f67bb 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 18 252 4.3E-91 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CO704_RS21945 bfd9e12a0990cc8b64314f28597f67bb 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 2.8E-68 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Gene3D G3DSA:2.60.40.10 112 223 4.9E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Pfam PF00128 Alpha amylase, catalytic domain 273 346 8.3E-10 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Gene3D G3DSA:3.20.20.80 233 612 2.2E-73 T 28-03-2018 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Gene3D G3DSA:2.60.40.10 2 104 1.4E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 9.0E-20 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 SUPERFAMILY SSF51445 230 621 3.75E-113 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 SMART SM00642 247 596 1.1E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Gene3D G3DSA:2.60.40.1180 624 726 9.4E-30 T 28-03-2018 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 SUPERFAMILY SSF81296 117 223 4.02E-34 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 SUPERFAMILY SSF81296 16 115 1.74E-17 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 SUPERFAMILY SSF51011 624 726 4.44E-32 T 28-03-2018 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.028 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 PIRSF PIRSF000463 6 728 2.7E-277 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CO704_RS00650 fdbcee94a136597f43389a89bb273a03 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 6.1E-24 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Gene3D G3DSA:3.40.50.1000 561 698 4.6E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 184 488 1.1E-100 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 709 1.9E-82 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF56784 492 730 4.78E-50 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF56784 434 453 4.78E-50 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 ProSitePatterns PS01047 Heavy-metal-associated domain. 55 85 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Gene3D G3DSA:3.30.70.100 47 118 2.3E-14 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF81665 186 238 2.48E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF81665 680 719 2.48E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF81665 335 429 2.48E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF55008 51 112 2.36E-14 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Pfam PF00122 E1-E2 ATPase 235 415 4.1E-49 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Gene3D G3DSA:1.20.1110.10 127 451 2.2E-31 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Pfam PF00403 Heavy-metal-associated domain 55 111 7.7E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 284 298 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 580 590 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 569 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 1.6E-28 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 SUPERFAMILY SSF81653 237 334 2.48E-23 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 644 2.1E-40 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 184 733 5.9E-181 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00941 Cadmium-transporting ATPase signature 53 62 3.0E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00941 Cadmium-transporting ATPase signature 64 85 3.0E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00941 Cadmium-transporting ATPase signature 147 164 3.0E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00941 Cadmium-transporting ATPase signature 219 239 3.0E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 PRINTS PR00941 Cadmium-transporting ATPase signature 300 316 3.0E-6 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 Gene3D G3DSA:3.40.1110.10 452 560 1.4E-28 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 188 710 8.9E-120 T 28-03-2018 CO704_RS00455 803e814399c3c7766bad3f1e8ebf9a8c 737 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 437 443 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 8.7E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 69 7.0E-30 T 28-03-2018 CO704_RS09095 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site CO704_RS20785 b6154e47d1eb5fe37e4581beaef92187 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 7.4E-89 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CO704_RS20785 b6154e47d1eb5fe37e4581beaef92187 185 Gene3D G3DSA:3.40.30.10 26 182 1.1E-6 T 28-03-2018 CO704_RS20785 b6154e47d1eb5fe37e4581beaef92187 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 180 5.8E-77 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CO704_RS13635 5e1c63c50220cd15cd4ddb6ee6bf6268 138 SUPERFAMILY SSF82649 5 136 2.67E-45 T 28-03-2018 CO704_RS13635 5e1c63c50220cd15cd4ddb6ee6bf6268 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 1.3E-42 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CO704_RS13635 5e1c63c50220cd15cd4ddb6ee6bf6268 138 Gene3D G3DSA:3.90.1010.10 1 137 3.1E-48 T 28-03-2018 CO704_RS13635 5e1c63c50220cd15cd4ddb6ee6bf6268 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.09 T 28-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 5.1E-79 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 6.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SMART SM00387 31 175 4.6E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SUPERFAMILY SSF56719 730 795 4.45E-87 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SUPERFAMILY SSF56719 394 560 4.45E-87 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Gene3D G3DSA:3.30.565.10 17 220 4.4E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Pfam PF01751 Toprim domain 419 531 1.2E-18 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SMART SM00433 35 797 4.6E-278 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Pfam PF00204 DNA gyrase B 221 390 3.9E-59 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SUPERFAMILY SSF55874 4 220 7.99E-76 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Gene3D G3DSA:3.40.50.670 402 801 1.2E-108 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Gene3D G3DSA:3.30.230.10 221 392 4.0E-66 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 113.087 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 171 7.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 SUPERFAMILY SSF54211 221 392 1.06E-61 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS24710 f50819a760a8d26efd54c8ba8623eb1b 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 5.0E-30 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 2.3E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 SMART SM00345 25 84 5.0E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 SUPERFAMILY SSF53383 119 488 5.21E-84 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 Gene3D G3DSA:3.90.1150.10 390 490 3.7E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 7.7E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 7.7E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 Pfam PF00155 Aminotransferase class I and II 151 476 8.6E-23 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 Gene3D G3DSA:1.10.10.10 9 86 3.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 Gene3D G3DSA:3.40.640.10 145 389 1.6E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS00515 f4f591442094654a1ee330830e8d5722 496 SUPERFAMILY SSF46785 20 86 6.48E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15655 ad910b94bb9e497a20b70fbf1f743dfc 203 SUPERFAMILY SSF89392 22 202 7.06E-58 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CO704_RS15655 ad910b94bb9e497a20b70fbf1f743dfc 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.5E-58 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CO704_RS15655 ad910b94bb9e497a20b70fbf1f743dfc 203 Gene3D G3DSA:2.50.20.10 19 202 1.7E-40 T 28-03-2018 CO704_RS15655 ad910b94bb9e497a20b70fbf1f743dfc 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 1.0E-115 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CO704_RS15655 ad910b94bb9e497a20b70fbf1f743dfc 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 201 32.579 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CO704_RS13850 92b5d0b2828dec885794ea531b1199f4 93 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 3 92 7.0E-24 T 28-03-2018 IPR020499 Uncharacterised protein family YdiZ CO704_RS13850 92b5d0b2828dec885794ea531b1199f4 93 Pfam PF11080 Endoribonuclease GhoS 1 91 4.8E-35 T 28-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 Gene3D G3DSA:3.40.190.10 178 266 2.0E-22 T 28-03-2018 CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 Pfam PF03466 LysR substrate binding domain 88 294 6.8E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 SUPERFAMILY SSF46785 4 83 8.41E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 Gene3D G3DSA:1.10.10.10 3 84 6.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 SUPERFAMILY SSF53850 89 297 1.28E-41 T 28-03-2018 CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS22575 7328b07caf416cce1298d9ddf87bc910 303 Gene3D G3DSA:3.40.190.10 93 177 3.9E-12 T 28-03-2018 CO704_RS13185 08a3344229561561362848c8319e9803 316 SUPERFAMILY SSF52402 155 308 1.51E-23 T 28-03-2018 CO704_RS13185 08a3344229561561362848c8319e9803 316 Gene3D G3DSA:3.40.50.620 1 152 6.1E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS13185 08a3344229561561362848c8319e9803 316 SUPERFAMILY SSF52402 4 155 4.52E-27 T 28-03-2018 CO704_RS13185 08a3344229561561362848c8319e9803 316 Pfam PF00582 Universal stress protein family 4 146 1.0E-17 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS13185 08a3344229561561362848c8319e9803 316 Pfam PF00582 Universal stress protein family 174 300 4.7E-14 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS13185 08a3344229561561362848c8319e9803 316 Gene3D G3DSA:3.40.50.620 154 304 7.7E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS09510 aab73f31ea884a4f0ca51c6f66d90efe 457 Gene3D G3DSA:3.40.50.300 106 450 2.5E-31 T 28-03-2018 CO704_RS09510 aab73f31ea884a4f0ca51c6f66d90efe 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 251 374 1.7E-25 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS09510 aab73f31ea884a4f0ca51c6f66d90efe 457 SMART SM00382 246 378 2.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09510 aab73f31ea884a4f0ca51c6f66d90efe 457 SUPERFAMILY SSF52540 205 443 1.09E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Gene3D G3DSA:3.30.300.30 378 477 4.8E-24 T 28-03-2018 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Pfam PF00501 AMP-binding enzyme 127 383 1.9E-47 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Pfam PF00501 AMP-binding enzyme 23 109 1.2E-6 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Gene3D G3DSA:2.30.38.10 296 377 7.4E-11 T 28-03-2018 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Pfam PF13193 AMP-binding enzyme C-terminal domain 392 464 1.2E-8 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 137 148 - T 28-03-2018 IPR020845 AMP-binding, conserved site CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Gene3D G3DSA:3.40.50.980 7 119 6.6E-9 T 28-03-2018 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 SUPERFAMILY SSF56801 20 474 3.79E-95 T 28-03-2018 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Gene3D G3DSA:3.40.50.980 120 142 1.5E-7 T 28-03-2018 CO704_RS18715 cbad5c018f2c0188b8260ad6488353ac 477 Gene3D G3DSA:3.40.50.980 143 295 7.7E-31 T 28-03-2018 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 SUPERFAMILY SSF52540 5 234 1.32E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 SMART SM00382 33 220 9.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 Gene3D G3DSA:1.20.1250.20 246 636 0.0014 T 28-03-2018 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 Pfam PF00005 ABC transporter 24 172 2.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 Pfam PF02687 FtsX-like permease family 550 638 8.2E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 Gene3D G3DSA:3.40.50.300 1 244 2.3E-60 T 28-03-2018 CO704_RS25275 bc58daec9e1fd5f1d02a364bd11d0e21 645 Pfam PF12704 MacB-like periplasmic core domain 271 487 9.0E-34 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 SUPERFAMILY SSF51735 2 254 4.47E-81 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 256 4.0E-124 T 28-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 Gene3D G3DSA:3.40.50.720 40 256 6.6E-63 T 28-03-2018 CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 Gene3D G3DSA:3.40.50.720 1 39 3.3E-9 T 28-03-2018 CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.4E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 Pfam PF00106 short chain dehydrogenase 3 196 1.6E-62 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12740 a574f018b3cbb64b967269c656ee91d6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS16325 13d721aa20d0c4a5bc740a6436d15c42 245 Gene3D G3DSA:3.40.50.150 26 242 2.0E-45 T 28-03-2018 CO704_RS16325 13d721aa20d0c4a5bc740a6436d15c42 245 SUPERFAMILY SSF53335 5 235 1.53E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS16325 13d721aa20d0c4a5bc740a6436d15c42 245 Pfam PF08241 Methyltransferase domain 47 141 7.1E-20 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CO704_RS23810 8ee781faf56c91230ac00d7806b03bf4 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.7E-27 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23810 8ee781faf56c91230ac00d7806b03bf4 78 Pfam PF00830 Ribosomal L28 family 3 62 4.3E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23810 8ee781faf56c91230ac00d7806b03bf4 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.065 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23810 8ee781faf56c91230ac00d7806b03bf4 78 SUPERFAMILY SSF143800 2 77 2.35E-29 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23810 8ee781faf56c91230ac00d7806b03bf4 78 Gene3D G3DSA:2.30.170.40 2 75 9.7E-28 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 SUPERFAMILY SSF63848 130 234 5.49E-29 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 3.2E-36 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 133 232 4.0E-29 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 Gene3D G3DSA:2.160.20.70 118 236 5.4E-28 T 28-03-2018 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 235 2.3E-68 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CO704_RS09220 a2efb7dc5fb09dd5a52ce8c3e03e5c39 236 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 236 28.411 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CO704_RS06085 f197421f226f0922f25f0e4edc5c1f62 80 Pfam PF13711 Domain of unknown function (DUF4160) 9 76 1.9E-19 T 28-03-2018 IPR025427 Protein of unknown function DUF4160 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Gene3D G3DSA:3.10.450.40 107 215 3.4E-24 T 28-03-2018 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 483 496 - T 28-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 SUPERFAMILY SSF55383 34 113 1.27E-16 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Pfam PF02728 Copper amine oxidase, N3 domain 214 315 1.9E-28 T 28-03-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Pfam PF07833 Copper amine oxidase N-terminal domain 35 108 1.6E-10 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 712 725 - T 28-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Gene3D G3DSA:2.70.98.20 305 757 1.4E-145 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 SUPERFAMILY SSF54416 121 211 1.88E-21 T 28-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Gene3D G3DSA:3.30.457.10 34 106 9.4E-12 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 SUPERFAMILY SSF54416 214 322 2.29E-29 T 28-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Gene3D G3DSA:3.10.450.40 216 304 2.5E-28 T 28-03-2018 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 SUPERFAMILY SSF49998 330 748 3.4E-143 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Pfam PF02727 Copper amine oxidase, N2 domain 122 207 8.7E-23 T 28-03-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS11830 60a27c0e6f7b737371a9c693ff076862 757 Pfam PF01179 Copper amine oxidase, enzyme domain 335 748 1.8E-127 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 1.5E-121 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 Pfam PF00551 Formyl transferase 6 183 3.0E-52 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.9E-32 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 SUPERFAMILY SSF50486 208 310 1.27E-36 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.548 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 SUPERFAMILY SSF53328 5 207 1.3E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 Gene3D G3DSA:3.10.25.10 210 312 1.3E-33 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS01260 096508d48adc436c3498507008cbcad6 315 Gene3D G3DSA:3.40.50.170 2 209 1.7E-68 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS22920 881f48476996686e585a303c1430c408 105 PIRSF PIRSF000699 1 104 6.7E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS22920 881f48476996686e585a303c1430c408 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.1E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS22920 881f48476996686e585a303c1430c408 105 Gene3D G3DSA:1.20.58.80 2 100 3.3E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS22920 881f48476996686e585a303c1430c408 105 SUPERFAMILY SSF46973 2 100 6.02E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 SUPERFAMILY SSF143865 7 255 4.32E-51 T 28-03-2018 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 SUPERFAMILY SSF144083 263 324 2.09E-13 T 28-03-2018 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 70.357 T 28-03-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 Gene3D G3DSA:3.30.460.20 1 138 2.7E-20 T 28-03-2018 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 Gene3D G3DSA:1.20.58.340 139 258 7.5E-19 T 28-03-2018 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 Gene3D G3DSA:1.20.58.340 259 327 4.9E-16 T 28-03-2018 CO704_RS10530 cd4190189a01104d071652dfd4324a15 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 8.4E-64 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 Gene3D G3DSA:1.10.10.10 11 82 8.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 Gene3D G3DSA:3.30.420.40 226 372 7.5E-28 T 28-03-2018 CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 SUPERFAMILY SSF46785 12 77 7.12E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 Gene3D G3DSA:3.30.420.40 83 225 5.3E-28 T 28-03-2018 CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 Pfam PF00480 ROK family 88 391 1.5E-52 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS12650 490f6f7d1329a9bf976fa6cf101ed229 405 SUPERFAMILY SSF53067 87 390 9.02E-42 T 28-03-2018 CO704_RS17110 b373ac53d17d52eb62e1d06a0f776ccb 251 Pfam PF13242 HAD-hyrolase-like 175 247 1.2E-18 T 28-03-2018 CO704_RS17110 b373ac53d17d52eb62e1d06a0f776ccb 251 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 106 6.5E-23 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CO704_RS17110 b373ac53d17d52eb62e1d06a0f776ccb 251 Gene3D G3DSA:3.40.50.1000 1 250 2.4E-28 T 28-03-2018 IPR023214 HAD-like domain CO704_RS17110 b373ac53d17d52eb62e1d06a0f776ccb 251 SUPERFAMILY SSF56784 1 248 3.36E-63 T 28-03-2018 IPR023214 HAD-like domain CO704_RS17110 b373ac53d17d52eb62e1d06a0f776ccb 251 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 224 7.9E-65 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 Pfam PF03958 Bacterial type II/III secretion system short domain 119 180 1.5E-9 T 28-03-2018 IPR005644 NolW-like CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 Pfam PF00263 Bacterial type II and III secretion system protein 253 412 2.5E-46 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 400 414 9.1E-12 T 28-03-2018 IPR001775 GspD/PilQ family CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 9.1E-12 T 28-03-2018 IPR001775 GspD/PilQ family CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 PRINTS PR00811 Bacterial general secretion pathway protein D signature 377 395 9.1E-12 T 28-03-2018 IPR001775 GspD/PilQ family CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 SMART SM00965 45 93 4.8E-5 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 20 412 5.9E-121 T 28-03-2018 IPR013355 Type IV pilus secretin PilQ CO704_RS00825 1421a5cba34d8c11e49faf065ac25f73 415 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 358 391 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 Gene3D G3DSA:3.40.1180.10 3 247 2.4E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.785 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 1.5E-103 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 SUPERFAMILY SSF64005 18 239 1.7E-85 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CO704_RS19285 ecab89e7d0a23e72559b71de06d3f3ce 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 1.9E-79 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 314 3.5E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 PIRSF PIRSF005644 1 336 7.6E-123 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 6.5E-17 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 Gene3D G3DSA:3.30.1330.10 1 156 1.2E-23 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 SUPERFAMILY SSF56042 163 331 1.5E-41 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 SUPERFAMILY SSF55326 4 156 1.43E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 336 1.2E-137 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CO704_RS24215 0136d113611aca78ef25926c2580cc4c 336 Gene3D G3DSA:3.90.650.10 161 324 4.3E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 Gene3D G3DSA:3.40.250.10 20 130 2.5E-8 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 ProSitePatterns PS00380 Rhodanese signature 1. 178 189 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SUPERFAMILY SSF52821 294 426 2.1E-30 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SMART SM00450 25 136 0.68 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SMART SM00450 291 419 6.2E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SMART SM00450 143 264 5.8E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 ProSitePatterns PS00683 Rhodanese C-terminal signature. 403 413 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 Gene3D G3DSA:3.40.250.10 281 429 3.9E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SUPERFAMILY SSF52821 34 128 6.16E-10 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 Pfam PF00581 Rhodanese-like domain 294 415 4.8E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 Pfam PF00581 Rhodanese-like domain 174 260 4.6E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 Gene3D G3DSA:3.40.250.10 136 280 3.5E-24 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS13980 3f650a5fece983fe552da72e30852cc9 429 SUPERFAMILY SSF52821 139 274 1.02E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 SUPERFAMILY SSF52540 4 244 3.68E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 Pfam PF00005 ABC transporter 20 165 7.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 SUPERFAMILY SSF50331 267 331 4.19E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 SMART SM00382 28 215 2.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 Gene3D G3DSA:2.40.50.140 278 339 7.3E-4 T 28-03-2018 CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 Gene3D G3DSA:3.40.50.300 2 254 9.4E-71 T 28-03-2018 CO704_RS14300 32dfc5df7efaaaa1ea35f6d1911d5d80 342 Pfam PF08402 TOBE domain 275 322 2.4E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:3.30.70.400 157 222 3.6E-25 T 28-03-2018 IPR015162 CheY binding CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:1.20.120.160 1 143 8.8E-36 T 28-03-2018 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:3.30.565.10 345 535 3.5E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SMART SM01231 279 342 4.3E-21 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SUPERFAMILY SSF55874 345 525 4.19E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:2.30.30.40 613 658 3.8E-21 T 28-03-2018 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SUPERFAMILY SSF55052 158 221 7.06E-19 T 28-03-2018 IPR015162 CheY binding CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:2.40.50.180 543 612 6.4E-12 T 28-03-2018 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Pfam PF01584 CheW-like domain 532 658 4.4E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Pfam PF01627 Hpt domain 6 103 6.0E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SMART SM00073 3 100 2.1E-35 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 280 342 1.1E-17 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 2.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 2.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 2.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 2.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SMART SM00387 387 527 6.3E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SUPERFAMILY SSF50341 526 658 9.02E-31 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Gene3D G3DSA:1.10.287.560 279 343 1.5E-19 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Pfam PF09078 CheY binding 159 221 2.1E-22 T 28-03-2018 IPR015162 CheY binding CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SMART SM00260 519 659 4.3E-43 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SUPERFAMILY SSF47384 280 343 3.77E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 526 1.1E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS08710 313c93f7e40afbda27e44bdeb7e94fb7 672 SUPERFAMILY SSF47226 3 124 2.49E-33 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS09125 125adec35799f61adb61acc6aadcb919 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 7.1E-112 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CO704_RS09125 125adec35799f61adb61acc6aadcb919 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 3.3E-147 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CO704_RS21895 6579861de1b0b304031538bc35bd1bf9 929 SUPERFAMILY SSF52540 446 575 2.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21895 6579861de1b0b304031538bc35bd1bf9 929 SUPERFAMILY SSF52540 609 847 2.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21895 6579861de1b0b304031538bc35bd1bf9 929 Gene3D G3DSA:3.40.50.300 353 911 2.4E-16 T 28-03-2018 CO704_RS21895 6579861de1b0b304031538bc35bd1bf9 929 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 28 917 0.0 T 28-03-2018 IPR022303 Conjugative transfer ATPase CO704_RS21895 6579861de1b0b304031538bc35bd1bf9 929 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 36 304 4.0E-70 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 470 491 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 445 464 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 517 541 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 217 235 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 413 430 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 PRINTS PR01005 Flagellar hook-associated protein signature 261 283 4.7E-113 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 495 550 1.1E-7 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS14620 488e7f6179375d766508788333790a6e 551 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS14620 488e7f6179375d766508788333790a6e 551 Pfam PF00460 Flagella basal body rod protein 6 36 8.9E-9 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS14620 488e7f6179375d766508788333790a6e 551 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 362 4.9E-83 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS14620 488e7f6179375d766508788333790a6e 551 SUPERFAMILY SSF64518 100 549 3.92E-55 T 28-03-2018 CO704_RS04790 03863fef44910432e34fb82041999883 478 SUPERFAMILY SSF47384 239 316 2.35E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS04790 03863fef44910432e34fb82041999883 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 3.1E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS04790 03863fef44910432e34fb82041999883 478 SMART SM00387 363 475 2.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS04790 03863fef44910432e34fb82041999883 478 Gene3D G3DSA:3.30.565.10 307 474 2.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS04790 03863fef44910432e34fb82041999883 478 SUPERFAMILY SSF55874 324 473 3.27E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS04790 03863fef44910432e34fb82041999883 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 472 7.9E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS04790 03863fef44910432e34fb82041999883 478 SMART SM00388 252 320 1.0E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS04790 03863fef44910432e34fb82041999883 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 6.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS04790 03863fef44910432e34fb82041999883 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 6.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS04790 03863fef44910432e34fb82041999883 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 6.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS04790 03863fef44910432e34fb82041999883 478 Gene3D G3DSA:1.10.287.130 242 306 1.3E-13 T 28-03-2018 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 Gene3D G3DSA:3.40.1130.10 235 500 2.0E-34 T 28-03-2018 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 PIRSF PIRSF500064 2 808 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 PIRSF PIRSF000437 19 809 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 Pfam PF01553 Acyltransferase 282 424 3.9E-26 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 SUPERFAMILY SSF69593 247 482 2.88E-23 T 28-03-2018 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 33.045 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CO704_RS22665 dc7a97314afa766abec59d67fd5fbec3 809 SMART SM00563 300 427 7.8E-28 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS09770 7d1795d79ae1ad89844765d9c7c4240c 142 SUPERFAMILY SSF52833 3 137 4.75E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS09770 7d1795d79ae1ad89844765d9c7c4240c 142 Gene3D G3DSA:3.40.30.10 1 141 7.4E-41 T 28-03-2018 CO704_RS09770 7d1795d79ae1ad89844765d9c7c4240c 142 Pfam PF03960 ArsC family 7 114 5.3E-16 T 28-03-2018 IPR006660 Arsenate reductase-like CO704_RS09770 7d1795d79ae1ad89844765d9c7c4240c 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 3.4E-39 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CO704_RS15815 38a790e5ee69b972c7c9eee146ce6e53 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 87 3.9E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS15815 38a790e5ee69b972c7c9eee146ce6e53 238 SUPERFAMILY SSF161098 8 216 3.53E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15815 38a790e5ee69b972c7c9eee146ce6e53 238 Gene3D G3DSA:1.10.3720.10 2 236 8.2E-35 T 28-03-2018 CO704_RS15815 38a790e5ee69b972c7c9eee146ce6e53 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 2.1E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 Gene3D G3DSA:2.40.160.10 11 373 4.1E-51 T 28-03-2018 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 SUPERFAMILY SSF56935 23 373 2.88E-69 T 28-03-2018 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 Pfam PF00267 Gram-negative porin 28 373 1.3E-121 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 7.7E-13 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 7.7E-13 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 7.7E-13 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 7.7E-13 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 235 247 7.7E-13 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 241 258 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS15495 b10603d8a3cf73305d70adc5fd2573f4 373 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 1.1E-65 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Gene3D G3DSA:1.10.10.350 366 471 2.1E-25 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Gene3D G3DSA:3.40.50.620 119 230 4.0E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 465 1.4E-211 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Gene3D G3DSA:3.40.50.620 3 118 1.5E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.819 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Gene3D G3DSA:1.10.1160.10 232 314 2.3E-35 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 SUPERFAMILY SSF52374 3 298 2.52E-113 T 28-03-2018 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.2E-123 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 SUPERFAMILY SSF48163 299 461 4.05E-46 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CO704_RS05910 a3f6c3a68e393d50d4dce8964140a41d 471 Gene3D G3DSA:1.10.8.70 317 360 8.2E-12 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 SUPERFAMILY SSF53187 288 370 1.92E-76 T 28-03-2018 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 SUPERFAMILY SSF53187 4 187 1.92E-76 T 28-03-2018 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 Pfam PF07687 Peptidase dimerisation domain 176 268 1.7E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 Gene3D G3DSA:3.40.630.10 2 254 9.1E-59 T 28-03-2018 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 Pfam PF01546 Peptidase family M20/M25/M40 63 367 8.0E-27 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 Gene3D G3DSA:3.40.630.10 255 373 1.2E-18 T 28-03-2018 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 SUPERFAMILY SSF55031 174 281 6.02E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 356 1.6E-110 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS13460 5114b4ab4d8654bdd5af0c36fc635496 373 PIRSF PIRSF005962 1 373 2.3E-110 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 SUPERFAMILY SSF47413 5 63 2.82E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 5.0E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 Gene3D G3DSA:1.10.260.40 7 62 4.9E-14 T 28-03-2018 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 2.1E-32 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 Gene3D G3DSA:3.40.50.2300 63 172 2.4E-26 T 28-03-2018 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 Gene3D G3DSA:3.40.50.2300 173 331 1.4E-34 T 28-03-2018 CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 SUPERFAMILY SSF53822 63 315 1.84E-60 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS00620 377e3b524a922d54f8daee00e162ea1a 331 SMART SM00354 5 75 2.6E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS02295 96b17030b0b5ca520d0bc5d4a425eb67 242 Pfam PF02661 Fic/DOC family 53 151 6.6E-10 T 28-03-2018 IPR003812 Fido domain CO704_RS02295 96b17030b0b5ca520d0bc5d4a425eb67 242 SUPERFAMILY SSF140931 46 195 3.27E-24 T 28-03-2018 IPR003812 Fido domain CO704_RS02295 96b17030b0b5ca520d0bc5d4a425eb67 242 Gene3D G3DSA:1.10.3290.10 10 207 1.6E-20 T 28-03-2018 IPR003812 Fido domain CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 Pfam PF02542 YgbB family 1 154 1.7E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.798 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 SUPERFAMILY SSF69765 1 156 3.01E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 3.0E-71 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS03705 1742827239cae9bf56916e4ada97d4be 159 Gene3D G3DSA:3.30.1330.50 1 158 1.8E-73 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 Gene3D G3DSA:3.40.190.10 171 264 8.2E-23 T 28-03-2018 CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 Pfam PF03466 LysR substrate binding domain 88 291 3.5E-38 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 SUPERFAMILY SSF46785 3 110 2.41E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 Gene3D G3DSA:1.10.10.10 1 78 2.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 Gene3D G3DSA:3.40.190.10 79 170 7.0E-7 T 28-03-2018 CO704_RS25085 725c6b1975aed7e808d9031c456b12e4 292 SUPERFAMILY SSF53850 88 292 2.9E-42 T 28-03-2018 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 Pfam PF03603 DNA polymerase III psi subunit 5 129 1.3E-45 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 6 127 2.3E-46 T 28-03-2018 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 PIRSF PIRSF029225 4 133 2.9E-48 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 Gene3D G3DSA:3.40.50.10220 37 131 1.4E-33 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 127 6.0E-30 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20155 a6caf11041a06eb510220dac5d092246 139 SUPERFAMILY SSF102220 29 137 3.14E-34 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS13085 3e31d95899ef826d79d468b2911b7fd7 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 3.7E-23 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS13085 3e31d95899ef826d79d468b2911b7fd7 101 SUPERFAMILY SSF52794 1 100 1.91E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS13085 3e31d95899ef826d79d468b2911b7fd7 101 Gene3D G3DSA:3.40.50.2300 2 101 1.3E-37 T 28-03-2018 CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 SMART SM00062 62 295 7.0E-26 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 Gene3D G3DSA:3.40.190.10 58 159 4.4E-20 T 28-03-2018 CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 292 9.6E-40 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 Gene3D G3DSA:3.40.190.10 160 298 9.1E-17 T 28-03-2018 CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 SUPERFAMILY SSF53850 1 21 1.49E-43 T 28-03-2018 CO704_RS13450 a4813a0df74e6e67af6a9fb0564acf4a 310 SUPERFAMILY SSF53850 52 292 1.49E-43 T 28-03-2018 CO704_RS15780 f803642cea812d2bcfcfc88be236b309 483 Pfam PF13460 NAD(P)H-binding 11 153 1.1E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15780 f803642cea812d2bcfcfc88be236b309 483 SUPERFAMILY SSF51735 1 295 5.65E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15780 f803642cea812d2bcfcfc88be236b309 483 Pfam PF11066 Protein of unknown function (DUF2867) 337 466 6.6E-14 T 28-03-2018 IPR021295 Protein of unknown function DUF2867 CO704_RS15780 f803642cea812d2bcfcfc88be236b309 483 Gene3D G3DSA:3.30.530.20 313 483 0.0019 T 28-03-2018 IPR023393 START-like domain CO704_RS15780 f803642cea812d2bcfcfc88be236b309 483 Gene3D G3DSA:3.40.50.720 2 305 2.6E-28 T 28-03-2018 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 Gene3D G3DSA:3.40.50.740 109 195 2.1E-13 T 28-03-2018 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 Gene3D G3DSA:2.20.25.90 37 108 4.8E-20 T 28-03-2018 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.8E-19 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 SMART SM00926 43 104 5.9E-21 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 Pfam PF00384 Molybdopterin oxidoreductase 107 139 9.1E-6 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS17870 3e3426f3921f5d357ac4cd3da193639a 195 SUPERFAMILY SSF53706 36 195 1.44E-56 T 28-03-2018 CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Pfam PF13247 4Fe-4S dicluster domain 59 151 5.4E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Gene3D G3DSA:3.30.70.20 119 201 1.6E-15 T 28-03-2018 CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Gene3D G3DSA:3.30.70.20 20 79 4.4E-15 T 28-03-2018 CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 SUPERFAMILY SSF54862 3 200 2.51E-69 T 28-03-2018 CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0024 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 5.6E-79 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Gene3D G3DSA:3.30.70.20 80 118 2.9E-21 T 28-03-2018 CO704_RS15635 2fb052a6ce980f3f4b3e36fbd49c501b 205 Gene3D G3DSA:3.30.70.20 2 19 0.0042 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.6E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 SUPERFAMILY SSF51905 5 301 1.3E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 Gene3D G3DSA:3.50.50.60 239 367 1.8E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 1.4E-12 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 1.4E-12 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.4E-12 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.4E-12 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 8.5E-21 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 8.5E-21 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.5E-21 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.5E-21 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.5E-21 T 28-03-2018 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 Gene3D G3DSA:3.50.50.60 3 100 2.2E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 54.471 T 28-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 CO704_RS05235 c7ea969216ea992155e97f60d0f39507 379 Gene3D G3DSA:3.50.50.60 101 234 7.9E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 Gene3D G3DSA:3.40.50.720 2 170 1.3E-48 T 28-03-2018 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 169 9.1E-47 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 PIRSF PIRSF000105 1 297 2.2E-78 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 SUPERFAMILY SSF48179 172 286 4.85E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 173 271 3.5E-20 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 Gene3D G3DSA:1.10.1040.10 171 276 2.1E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 170 194 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS09430 69531d4c50138ca77bc1beab379a410c 297 SUPERFAMILY SSF51735 1 169 2.13E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Gene3D G3DSA:2.40.40.20 674 813 4.3E-37 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 SMART SM00926 54 113 9.6E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Gene3D G3DSA:2.20.25.90 47 118 1.4E-16 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 SUPERFAMILY SSF53706 55 694 1.44E-170 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Gene3D G3DSA:3.40.228.10 609 673 1.8E-14 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 SUPERFAMILY SSF50692 682 812 9.12E-39 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Gene3D G3DSA:3.90.55.10 539 608 1.6E-16 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 55 113 2.9E-14 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Gene3D G3DSA:3.40.228.10 202 483 1.4E-66 T 28-03-2018 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Pfam PF01568 Molydopterin dinucleotide binding domain 692 805 1.3E-27 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 813 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 Pfam PF00384 Molybdopterin oxidoreductase 116 571 9.0E-101 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS12610 326c23861a80bd4c54571611be8d0b30 813 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 728 755 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS01895 59deaa322d5795b5660681d6695558fb 176 Gene3D G3DSA:3.40.50.360 1 176 4.2E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS01895 59deaa322d5795b5660681d6695558fb 176 SUPERFAMILY SSF52218 1 175 2.99E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS01895 59deaa322d5795b5660681d6695558fb 176 Pfam PF02525 Flavodoxin-like fold 1 169 1.7E-41 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS09550 02876668026611882e3632b383bdbbc1 152 Pfam PF04965 Gene 25-like lysozyme 31 120 6.7E-22 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CO704_RS09550 02876668026611882e3632b383bdbbc1 152 SUPERFAMILY SSF160719 29 134 2.22E-28 T 28-03-2018 CO704_RS09550 02876668026611882e3632b383bdbbc1 152 Gene3D G3DSA:3.10.450.40 2 135 4.7E-37 T 28-03-2018 CO704_RS15795 d795367f31b1a65ed4619126ba4328e7 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.557 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CO704_RS15795 d795367f31b1a65ed4619126ba4328e7 107 Gene3D G3DSA:3.30.110.70 1 105 1.3E-36 T 28-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CO704_RS15795 d795367f31b1a65ed4619126ba4328e7 107 Pfam PF01906 Putative heavy-metal-binding 1 104 1.5E-40 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CO704_RS15795 d795367f31b1a65ed4619126ba4328e7 107 SUPERFAMILY SSF117782 1 106 2.35E-38 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 PIRSF PIRSF016183 10 184 7.1E-72 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 Gene3D G3DSA:1.10.60.30 38 106 3.7E-24 T 28-03-2018 CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 SUPERFAMILY SSF158710 37 180 1.44E-51 T 28-03-2018 IPR023153 PSPTO4464-like domain CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 Gene3D G3DSA:1.10.60.30 111 184 1.9E-28 T 28-03-2018 CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 Pfam PF04751 Protein of unknown function (DUF615) 26 176 6.0E-56 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CO704_RS21300 675266c4bf1b034934b336a76c153aa5 184 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 23.804 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CO704_RS07530 71c5101c601cd7da59bd6cd167993d0f 474 Gene3D G3DSA:2.160.20.10 278 443 2.0E-6 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS07530 71c5101c601cd7da59bd6cd167993d0f 474 SUPERFAMILY SSF51126 255 387 6.68E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS07530 71c5101c601cd7da59bd6cd167993d0f 474 Gene3D G3DSA:2.160.20.10 51 277 2.1E-9 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS07530 71c5101c601cd7da59bd6cd167993d0f 474 SUPERFAMILY SSF51126 53 296 2.16E-15 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS07530 71c5101c601cd7da59bd6cd167993d0f 474 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 14 470 1.1E-259 T 28-03-2018 IPR023882 Colanic acid biosynthesis WcaM CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 3.7E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 Gene3D G3DSA:1.10.3860.10 1 408 2.1E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.0E-111 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.806 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CO704_RS24600 9922ec8beb0af1f7067bde31927c9391 428 SUPERFAMILY SSF118215 9 401 1.7E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS06260 ea72bff0ff8273e935c6b2543a36e5cb 94 Pfam PF04175 Protein of unknown function (DUF406) 4 94 2.3E-37 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CO704_RS06260 ea72bff0ff8273e935c6b2543a36e5cb 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 4.4E-40 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CO704_RS06260 ea72bff0ff8273e935c6b2543a36e5cb 94 Gene3D G3DSA:3.30.70.860 15 94 3.3E-32 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 Gene3D G3DSA:3.40.50.150 102 275 5.2E-36 T 28-03-2018 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 Gene3D G3DSA:1.10.8.10 14 101 5.3E-12 T 28-03-2018 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 PIRSF PIRSF037167 1 307 2.1E-146 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.48 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 6.5E-105 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.3E-135 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 Pfam PF05175 Methyltransferase small domain 132 215 1.5E-17 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CO704_RS06285 6b5655aef3514975ea99a10a87faca3d 310 SUPERFAMILY SSF53335 15 294 1.7E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS21105 2a9d0e2b5b0db7317896019faab2f34f 157 Gene3D G3DSA:3.40.35.10 3 157 5.6E-56 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS21105 2a9d0e2b5b0db7317896019faab2f34f 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 9.6E-70 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CO704_RS21105 2a9d0e2b5b0db7317896019faab2f34f 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 3.1E-50 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS21105 2a9d0e2b5b0db7317896019faab2f34f 157 SUPERFAMILY SSF52728 3 156 3.14E-52 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Pfam PF07650 KH domain 209 285 7.0E-20 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Hamap MF_00367 GTPase Era [era]. 6 297 35.559 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Gene3D G3DSA:1.20.120.430 2 63 2.3E-15 T 28-03-2018 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Pfam PF01926 50S ribosome-binding GTPase 11 125 3.0E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 1.5E-40 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Gene3D G3DSA:3.30.300.20 196 300 9.6E-44 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 SUPERFAMILY SSF52540 12 205 1.17E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 SUPERFAMILY SSF54814 182 297 3.66E-41 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 4.5E-117 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 Gene3D G3DSA:3.40.50.300 64 195 1.1E-13 T 28-03-2018 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 2.5E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS04615 f9e7c7dfd8dd2f64ecd627e4d6a8b513 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 2.5E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 3.5E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 46.856 T 28-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 SUPERFAMILY SSF118215 8 412 3.01E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 Gene3D G3DSA:1.10.3860.10 2 418 1.2E-123 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CO704_RS22460 d813930b974136e201029cf8a7dc4098 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 4.6E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 Gene3D G3DSA:3.30.565.10 306 465 5.5E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SUPERFAMILY SSF47384 228 310 2.35E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SMART SM00304 191 244 4.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SMART SM00388 245 311 3.1E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 310 7.7E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 Gene3D G3DSA:1.10.287.130 235 305 4.4E-14 T 28-03-2018 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SMART SM00387 354 465 3.8E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SUPERFAMILY SSF158472 193 241 2.62E-5 T 28-03-2018 CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 463 6.4E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 SUPERFAMILY SSF55874 301 463 6.81E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11395 41e4f0082523ea7b81285270b4c4fe97 467 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 462 7.2E-121 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CO704_RS03820 ee7dc31914142886b9a22fdc2493d1a0 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 2.5E-75 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CO704_RS03820 ee7dc31914142886b9a22fdc2493d1a0 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 9.9E-111 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CO704_RS03820 ee7dc31914142886b9a22fdc2493d1a0 182 PIRSF PIRSF038321 2 182 8.5E-88 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 Pfam PF04055 Radical SAM superfamily 27 184 1.2E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 Gene3D G3DSA:3.20.20.70 24 220 8.0E-13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 8.0E-112 T 28-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 4.5E-13 T 28-03-2018 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 39.297 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 SUPERFAMILY SSF102114 24 118 2.09E-7 T 28-03-2018 CO704_RS03585 0e4a9d721a7e29a6b6f753a3bc1778df 223 PIRSF PIRSF000370 1 223 9.6E-73 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CO704_RS02865 0c7398de4c1bc08114ca4038acb13506 141 Gene3D G3DSA:3.40.50.510 3 129 9.1E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS02865 0c7398de4c1bc08114ca4038acb13506 141 Pfam PF03610 PTS system fructose IIA component 10 119 1.8E-15 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS02865 0c7398de4c1bc08114ca4038acb13506 141 SUPERFAMILY SSF53062 9 129 1.18E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS18065 1f6be313da4b1f34ddb67b5810ba6270 297 SUPERFAMILY SSF103481 39 141 2.48E-15 T 28-03-2018 CO704_RS18065 1f6be313da4b1f34ddb67b5810ba6270 297 Pfam PF00892 EamA-like transporter family 152 281 6.2E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS18065 1f6be313da4b1f34ddb67b5810ba6270 297 Pfam PF00892 EamA-like transporter family 8 138 1.8E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS18065 1f6be313da4b1f34ddb67b5810ba6270 297 SUPERFAMILY SSF103481 186 285 1.31E-16 T 28-03-2018 CO704_RS21230 3f05563df138dfe192ed13e9e3dd17ee 95 Gene3D G3DSA:3.30.1190.10 59 94 3.3E-11 T 28-03-2018 CO704_RS21230 3f05563df138dfe192ed13e9e3dd17ee 95 SMART SM00530 38 93 2.3E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS21230 3f05563df138dfe192ed13e9e3dd17ee 95 Pfam PF01381 Helix-turn-helix 39 90 6.5E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS21230 3f05563df138dfe192ed13e9e3dd17ee 95 Gene3D G3DSA:1.10.10.60 31 58 2.4E-7 T 28-03-2018 CO704_RS21230 3f05563df138dfe192ed13e9e3dd17ee 95 SUPERFAMILY SSF47413 27 89 5.35E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 PIRSF PIRSF016262 1 212 1.1E-55 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 5.9E-79 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-21 T 28-03-2018 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 Gene3D G3DSA:3.30.930.10 1 204 3.5E-60 T 28-03-2018 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.88 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 SUPERFAMILY SSF55681 5 205 9.11E-70 T 28-03-2018 CO704_RS17270 8ee2a3bb57024ab7a2b218695248c8c5 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 9.9E-8 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CO704_RS07210 69ce2617d20360638f374d089508a658 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 37.165 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CO704_RS07210 69ce2617d20360638f374d089508a658 370 SUPERFAMILY SSF52540 98 332 3.33E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07210 69ce2617d20360638f374d089508a658 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 6.1E-100 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CO704_RS07210 69ce2617d20360638f374d089508a658 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 CO704_RS07210 69ce2617d20360638f374d089508a658 370 Gene3D G3DSA:3.40.50.300 92 329 2.1E-61 T 28-03-2018 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 SUPERFAMILY SSF53335 95 458 1.36E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 97 458 1.9E-100 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 Gene3D G3DSA:3.90.120.10 313 446 4.5E-23 T 28-03-2018 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 Gene3D G3DSA:3.40.50.150 87 309 3.2E-57 T 28-03-2018 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 96 112 3.2E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 279 292 3.2E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 225 239 3.2E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 Pfam PF00145 C-5 cytosine-specific DNA methylase 95 456 2.3E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08330 05ed15084181a1de7198e213ac4124e1 469 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 177 189 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 2.0E-27 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 SUPERFAMILY SSF56784 4 185 3.87E-45 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 120 183 1.1E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.2E-63 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 Gene3D G3DSA:3.40.50.1000 73 187 4.8E-21 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03890 7b81d0f9910f5b308deac29d6809093f 188 Gene3D G3DSA:1.10.150.240 18 72 4.4E-13 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PIRSF PIRSF006356 1 406 2.3E-146 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 Pfam PF02274 Amidinotransferase 18 402 9.3E-103 T 28-03-2018 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 Gene3D G3DSA:3.75.10.10 5 404 4.6E-96 T 28-03-2018 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 SUPERFAMILY SSF55909 4 406 4.51E-129 T 28-03-2018 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 43.097 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 4.9E-158 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS01985 4481da0fd16c4db61ab94de2dcd93026 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 1.4E-43 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CO704_RS06310 21020fae7ecd9e17a8c917883c3d845b 91 Pfam PF08891 YfcL protein 4 86 2.4E-34 T 28-03-2018 IPR014987 Uncharacterised protein family YfcL CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 SUPERFAMILY SSF53474 2 277 6.28E-66 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 Pfam PF00561 alpha/beta hydrolase fold 24 260 2.4E-27 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 Gene3D G3DSA:3.40.50.1820 1 278 4.3E-73 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.5E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 3.5E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10550 91d67124a97a6a718ce2bcaacef5f528 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.5E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 SUPERFAMILY SSF51556 8 346 6.45E-146 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS14720 a272d40d3218d884dbf958619e512985 348 Gene3D G3DSA:3.20.20.140 14 348 5.1E-53 T 28-03-2018 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 57.62 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 8.4E-156 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 Pfam PF01979 Amidohydrolase family 15 307 8.9E-23 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS14720 a272d40d3218d884dbf958619e512985 348 PIRSF PIRSF001237 4 348 4.3E-141 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 Gene3D G3DSA:3.40.47.10 1 142 2.3E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 Gene3D G3DSA:3.40.47.10 149 270 4.0E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 Pfam PF00108 Thiolase, N-terminal domain 3 262 1.4E-92 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 Pfam PF02803 Thiolase, C-terminal domain 270 398 9.0E-41 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 SUPERFAMILY SSF53901 3 267 1.59E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 SUPERFAMILY SSF53901 270 398 2.74E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 398 1.1E-138 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 Gene3D G3DSA:3.40.47.10 271 397 1.5E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 PIRSF PIRSF000429 1 400 1.7E-123 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS26010 66bed53619e78976eb8abae8e3b91d38 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CO704_RS24930 35bd03183b00a668614d268326048358 451 SMART SM00060 314 385 1.4E-5 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 CO704_RS24930 35bd03183b00a668614d268326048358 451 Pfam PF00704 Glycosyl hydrolases family 18 17 211 3.2E-10 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CO704_RS24930 35bd03183b00a668614d268326048358 451 Gene3D G3DSA:3.20.20.80 12 306 6.4E-18 T 28-03-2018 CO704_RS24930 35bd03183b00a668614d268326048358 451 Gene3D G3DSA:2.60.40.10 307 405 7.7E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS24930 35bd03183b00a668614d268326048358 451 SUPERFAMILY SSF49265 309 403 1.2E-13 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 CO704_RS24930 35bd03183b00a668614d268326048358 451 Gene3D G3DSA:2.10.10.20 407 449 2.9E-6 T 28-03-2018 CO704_RS24930 35bd03183b00a668614d268326048358 451 SUPERFAMILY SSF51055 406 448 1.83E-12 T 28-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CO704_RS24930 35bd03183b00a668614d268326048358 451 SUPERFAMILY SSF51445 31 276 3.63E-15 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS22880 971e12abdfd55c41889e319e4ef084a7 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.451 T 28-03-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CO704_RS22880 971e12abdfd55c41889e319e4ef084a7 167 PIRSF PIRSF016548 1 158 2.2E-50 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CO704_RS22880 971e12abdfd55c41889e319e4ef084a7 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 146 4.2E-53 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 SUPERFAMILY SSF51905 2 175 1.73E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 SUPERFAMILY SSF51905 265 381 1.73E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.3E-14 T 28-03-2018 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 9.3E-14 T 28-03-2018 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 9.3E-14 T 28-03-2018 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 9.3E-14 T 28-03-2018 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 Pfam PF01494 FAD binding domain 2 339 2.6E-24 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 Gene3D G3DSA:3.50.50.60 2 352 5.7E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 1.6E-139 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CO704_RS03000 1dfb7679b7ba8b8364e6986068963bbb 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 2.6E-129 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CO704_RS00725 ced109659f82ef6bfe811763d76ada97 92 Gene3D G3DSA:3.30.1660.10 22 89 4.2E-19 T 28-03-2018 IPR025543 Dodecin-like CO704_RS00725 ced109659f82ef6bfe811763d76ada97 92 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 7.3E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS00725 ced109659f82ef6bfe811763d76ada97 92 SUPERFAMILY SSF159871 4 89 9.16E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 Gene3D G3DSA:3.40.640.10 74 299 2.1E-29 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 SUPERFAMILY SSF53383 2 396 6.04E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 Gene3D G3DSA:3.90.1150.10 1 73 9.1E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 4.0E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 4.0E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 4.0E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 4.0E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 Gene3D G3DSA:3.90.1150.10 300 397 6.0E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22605 c9db9861632bb93343621cd23bf870f2 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.5E-84 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 100.546 T 28-03-2018 IPR017757 Transcriptional repressor BetI CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Gene3D G3DSA:1.10.357.10 65 197 5.1E-14 T 28-03-2018 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.7E-75 T 28-03-2018 IPR017757 Transcriptional repressor BetI CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 SUPERFAMILY SSF46689 3 80 1.39E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 SUPERFAMILY SSF48498 82 190 7.63E-17 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Gene3D G3DSA:1.10.260.40 36 64 2.0E-12 T 28-03-2018 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Gene3D G3DSA:1.10.10.60 2 35 5.5E-11 T 28-03-2018 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 2.9E-28 T 28-03-2018 CO704_RS11310 9a0f03751bdea1e96e14dc4c18c7dcfe 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 7.2E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 Gene3D G3DSA:3.30.450.20 9 103 9.5E-9 T 28-03-2018 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SMART SM00388 129 194 1.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SMART SM00091 7 75 7.6E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.9E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SUPERFAMILY SSF55874 198 346 4.58E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SUPERFAMILY SSF47384 121 186 2.94E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 Gene3D G3DSA:1.10.287.130 118 187 3.7E-14 T 28-03-2018 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 Gene3D G3DSA:3.30.565.10 194 349 2.1E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SMART SM00387 233 349 8.9E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 1.2E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23940 dc11c3633f2051180af40e7507f81a18 349 SUPERFAMILY SSF55785 11 99 8.95E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS14275 c269172d3deb57bf1ee3a6d82b50d619 209 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 7.0E-90 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CO704_RS14275 c269172d3deb57bf1ee3a6d82b50d619 209 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.346 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CO704_RS14275 c269172d3deb57bf1ee3a6d82b50d619 209 Pfam PF04356 Protein of unknown function (DUF489) 7 199 1.6E-74 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CO704_RS14275 c269172d3deb57bf1ee3a6d82b50d619 209 Gene3D G3DSA:1.10.3890.10 4 207 3.1E-79 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CO704_RS14275 c269172d3deb57bf1ee3a6d82b50d619 209 SUPERFAMILY SSF101322 2 208 1.83E-81 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CO704_RS09215 ebbdeb32faa9a8cf64ca6a376185363b 270 PIRSF PIRSF003092 1 270 8.3E-99 T 28-03-2018 IPR025501 ATP binding protein MinD CO704_RS09215 ebbdeb32faa9a8cf64ca6a376185363b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.4E-110 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CO704_RS09215 ebbdeb32faa9a8cf64ca6a376185363b 270 Gene3D G3DSA:3.40.50.300 1 260 1.7E-55 T 28-03-2018 CO704_RS09215 ebbdeb32faa9a8cf64ca6a376185363b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 4.2E-20 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CO704_RS09215 ebbdeb32faa9a8cf64ca6a376185363b 270 SUPERFAMILY SSF52540 1 268 2.14E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02260 59f557da605f765d3905ff1c131c9c25 175 SUPERFAMILY SSF49329 26 173 4.45E-44 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CO704_RS02260 59f557da605f765d3905ff1c131c9c25 175 Gene3D G3DSA:2.60.40.200 25 175 5.1E-33 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CO704_RS02260 59f557da605f765d3905ff1c131c9c25 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 173 8.8E-30 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CO704_RS11845 a4a2cd075964dd00a8527f81d4a07f24 231 SUPERFAMILY SSF53335 12 228 9.88E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS11845 a4a2cd075964dd00a8527f81d4a07f24 231 Gene3D G3DSA:3.40.50.150 7 230 2.9E-30 T 28-03-2018 CO704_RS11845 a4a2cd075964dd00a8527f81d4a07f24 231 Pfam PF13649 Methyltransferase domain 47 144 1.9E-14 T 28-03-2018 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 Pfam PF00072 Response regulator receiver domain 4 111 3.2E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 Gene3D G3DSA:3.40.50.2300 1 119 1.4E-29 T 28-03-2018 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 SUPERFAMILY SSF52172 1 173 4.5E-34 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 SMART SM00448 1 112 6.5E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 SMART SM00862 145 216 1.5E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS02485 9477439f116507c0e76a2c8cb5273edc 220 Gene3D G3DSA:1.10.10.10 120 219 7.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 301 9.1E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 Gene3D G3DSA:3.40.50.300 4 324 7.8E-87 T 28-03-2018 CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 SMART SM00382 42 233 5.1E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 SUPERFAMILY SSF52540 7 255 3.75E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 Pfam PF00005 ABC transporter 34 183 7.6E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS08670 3fe9847181aa9cbe7be37f8ef51be920 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.1E-23 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS11950 dad57f360b0ae6bdad889897243ccc6f 119 Gene3D G3DSA:3.10.450.160 25 115 1.0E-12 T 28-03-2018 CO704_RS11950 dad57f360b0ae6bdad889897243ccc6f 119 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 34 108 9.0E-23 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS11950 dad57f360b0ae6bdad889897243ccc6f 119 Pfam PF11776 Nickel/cobalt transporter regulator 59 109 1.9E-18 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS09105 4a9257da891118a2250f87c780e38e1e 267 PIRSF PIRSF018249 1 267 1.1E-82 T 28-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CO704_RS09105 4a9257da891118a2250f87c780e38e1e 267 Pfam PF13847 Methyltransferase domain 85 192 7.5E-13 T 28-03-2018 IPR025714 Methyltransferase domain CO704_RS09105 4a9257da891118a2250f87c780e38e1e 267 Gene3D G3DSA:3.40.50.150 1 267 5.7E-52 T 28-03-2018 CO704_RS09105 4a9257da891118a2250f87c780e38e1e 267 SUPERFAMILY SSF53335 5 249 1.53E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 43.301 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 PIRSF PIRSF039102 1 359 1.3E-138 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 SUPERFAMILY SSF52440 3 139 4.51E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Gene3D G3DSA:3.30.470.20 213 359 8.3E-45 T 28-03-2018 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Gene3D G3DSA:3.40.50.20 1 150 9.6E-44 T 28-03-2018 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.5E-119 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 2.6E-30 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 6.9E-82 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 SUPERFAMILY SSF56059 140 357 5.13E-63 T 28-03-2018 CO704_RS18500 5867fd99b7287f12b461a83a94aac698 366 Gene3D G3DSA:3.30.1490.20 155 212 3.5E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 8.1E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 329 7.7E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 SUPERFAMILY SSF51735 102 298 8.83E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 SUPERFAMILY SSF52283 2 135 4.91E-46 T 28-03-2018 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 Gene3D G3DSA:3.40.50.720 2 115 4.1E-29 T 28-03-2018 CO704_RS11900 2f6aa5a63f76cb6e81ca01bc70527afe 329 Gene3D G3DSA:3.40.50.720 116 300 2.4E-51 T 28-03-2018 CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 ProSitePatterns PS00018 EF-hand calcium-binding domain. 401 413 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 Gene3D G3DSA:1.10.443.10 202 395 4.3E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 SUPERFAMILY SSF56349 97 391 1.03E-47 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 Gene3D G3DSA:1.10.150.130 87 201 2.2E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 Pfam PF13356 Arm DNA-binding domain 3 87 2.4E-21 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS02100 79a03ea3fe5459ed7dff7e5a2c60eb10 423 Pfam PF00589 Phage integrase family 209 383 7.9E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 SUPERFAMILY SSF57716 217 268 1.14E-17 T 28-03-2018 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 SMART SM01232 129 221 4.1E-49 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.8E-108 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.4E-10 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Gene3D G3DSA:3.20.190.10 1 130 3.5E-37 T 28-03-2018 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.745 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.5E-32 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Gene3D G3DSA:1.10.8.50 131 269 9.6E-53 T 28-03-2018 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 SMART SM00898 2 115 3.4E-54 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 SUPERFAMILY SSF81624 2 138 2.88E-43 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 SUPERFAMILY SSF46946 130 222 2.36E-30 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CO704_RS23800 6d3743fdce8f55b0357f302f71daaabf 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.6E-31 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 SUPERFAMILY SSF51735 1 145 5.15E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 28-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 Gene3D G3DSA:3.90.110.10 148 311 1.6E-42 T 28-03-2018 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 7.4E-137 T 28-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 9.9E-45 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 SUPERFAMILY SSF56327 146 310 1.05E-41 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 PIRSF PIRSF000102 1 310 3.4E-59 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 Gene3D G3DSA:3.40.50.720 2 147 2.6E-39 T 28-03-2018 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.273 T 28-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CO704_RS01515 ae6fa0d016f0ab2a8c272184ce313631 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 6.0E-51 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.186 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.3E-92 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 Gene3D G3DSA:3.40.50.620 2 216 1.4E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.1E-50 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 SUPERFAMILY SSF52402 20 208 2.32E-53 T 28-03-2018 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 PIRSF PIRSF000857 6 243 1.2E-55 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CO704_RS03655 d35ede7aebeb32195f7c3e0ae9c7a815 243 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.3E-99 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SUPERFAMILY SSF57783 809 864 3.23E-23 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF01751 Toprim domain 5 142 1.2E-33 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SMART SM00493 3 132 7.5E-33 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SUPERFAMILY SSF57783 744 807 1.34E-19 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.458 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SMART SM00437 272 527 7.6E-126 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 7.4E-263 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:3.40.50.140 1 163 1.2E-50 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:3.30.65.10 696 744 1.3E-9 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:3.30.65.10 573 645 2.0E-11 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:3.30.65.10 745 807 6.0E-10 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:2.70.20.10 347 473 7.3E-40 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SMART SM00436 133 221 4.0E-49 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:1.10.460.10 164 346 6.2E-47 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SUPERFAMILY SSF57783 704 743 1.79E-7 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Gene3D G3DSA:2.20.25.10 809 863 1.6E-30 T 28-03-2018 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF01131 DNA topoisomerase 157 565 2.1E-129 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 8.4E-21 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 4.7E-12 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.4E-6 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CO704_RS10325 c1f488b044eafc0e07a687404b3e191a 865 SUPERFAMILY SSF56712 3 609 6.54E-207 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 Gene3D G3DSA:3.30.230.10 76 166 9.9E-34 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.8E-30 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 SUPERFAMILY SSF54211 79 159 3.54E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 SUPERFAMILY SSF54768 9 75 9.52E-24 T 28-03-2018 CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 Gene3D G3DSA:3.30.160.20 10 72 1.4E-27 T 28-03-2018 CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.8E-29 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 6.2E-71 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01180 f7fe9673726ced5b6e3c2a04133d163e 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.777 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Pfam PF03764 Elongation factor G, domain IV 486 609 9.1E-45 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Gene3D G3DSA:3.30.230.10 501 624 4.0E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SUPERFAMILY SSF54211 486 610 9.61E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Gene3D G3DSA:3.30.70.870 403 500 5.0E-36 T 28-03-2018 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Pfam PF00679 Elongation factor G C-terminus 611 696 1.8E-29 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.0E-16 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SUPERFAMILY SSF50447 271 411 3.53E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SMART SM00838 611 698 2.4E-50 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 5.8E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Gene3D G3DSA:3.30.70.240 625 702 4.4E-30 T 28-03-2018 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.6E-32 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SUPERFAMILY SSF52540 6 287 2.32E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Gene3D G3DSA:2.40.30.10 281 402 2.5E-29 T 28-03-2018 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SUPERFAMILY SSF54980 611 700 8.27E-28 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SMART SM00889 487 609 9.2E-72 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 28-03-2018 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Gene3D G3DSA:3.40.50.300 1 280 7.0E-59 T 28-03-2018 CO704_RS01065 ae1b2de53a59abaea43b8c86987e958d 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.37 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 27 46 - T 28-03-2018 IPR019844 Cold-shock conserved site CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 PIRSF PIRSF002599 10 79 2.5E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 PRINTS PR00050 Cold shock protein signature 37 46 2.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 PRINTS PR00050 Cold shock protein signature 16 31 2.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 PRINTS PR00050 Cold shock protein signature 52 70 2.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 SMART SM00357 15 79 7.0E-33 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 Gene3D G3DSA:2.40.50.140 13 79 6.1E-29 T 28-03-2018 CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 SUPERFAMILY SSF50249 10 78 2.79E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS17300 e40debb412799d083b2d80dbccd32443 79 Pfam PF00313 'Cold-shock' DNA-binding domain 15 78 1.9E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Pfam PF01743 Poly A polymerase head domain 3 122 1.0E-17 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 PIRSF PIRSF000813 1 408 4.0E-200 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 SUPERFAMILY SSF81301 2 119 3.6E-30 T 28-03-2018 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 SMART SM00471 224 359 0.0022 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Gene3D G3DSA:3.30.460.10 1 118 1.1E-28 T 28-03-2018 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 SUPERFAMILY SSF81891 120 401 2.22E-56 T 28-03-2018 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Gene3D G3DSA:1.10.3090.10 119 407 8.9E-60 T 28-03-2018 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Pfam PF01966 HD domain 229 328 1.4E-12 T 28-03-2018 IPR006674 HD domain CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.065 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.069 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CO704_RS20285 a16f7bc911cbe07559f7ab90cc57f3fb 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 5.2E-16 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 584 4.8E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 126 1.3E-7 T 28-03-2018 IPR029095 NarX-like, N-terminal CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 Gene3D G3DSA:3.30.565.10 417 583 2.6E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 PIRSF PIRSF003167 1 596 7.0E-183 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 Pfam PF00672 HAMP domain 176 224 7.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 SMART SM00304 176 228 1.6E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 Pfam PF07730 Histidine kinase 390 453 4.0E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 SUPERFAMILY SSF158472 177 225 9.68E-7 T 28-03-2018 CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 SUPERFAMILY SSF55874 467 582 2.75E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS09730 46ff33149fd45ba7a00a61fbefe132a4 597 SMART SM00387 494 587 5.9E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 SUPERFAMILY SSF48600 6 93 2.2E-22 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Pfam PF01817 Chorismate mutase type II 11 89 1.2E-16 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 SMART SM00830 11 91 2.6E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 PIRSF PIRSF001500 1 380 1.8E-144 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 1.2E-40 T 28-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Gene3D G3DSA:3.30.70.260 289 383 2.8E-25 T 28-03-2018 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 SUPERFAMILY SSF55021 280 377 8.24E-23 T 28-03-2018 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Gene3D G3DSA:3.40.190.10 113 197 3.2E-31 T 28-03-2018 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 SUPERFAMILY SSF53850 105 291 2.06E-57 T 28-03-2018 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Gene3D G3DSA:1.20.59.10 1 112 2.0E-29 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Gene3D G3DSA:3.40.190.10 198 274 5.3E-25 T 28-03-2018 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CO704_RS04445 95dd33990a23b897a354928eefe34e50 386 Pfam PF00800 Prephenate dehydratase 106 286 2.0E-62 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CO704_RS16170 d39fa506d8a67f890d32decc35312037 137 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 41 137 5.3E-12 T 28-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 SMART SM00354 1 71 7.7E-33 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.2E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 Gene3D G3DSA:1.10.260.40 2 53 1.4E-24 T 28-03-2018 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 Pfam PF13377 Periplasmic binding protein-like domain 168 319 2.6E-26 T 28-03-2018 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 Gene3D G3DSA:3.40.50.2300 54 174 8.1E-29 T 28-03-2018 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 SUPERFAMILY SSF47413 1 59 4.96E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 Gene3D G3DSA:3.40.50.2300 175 304 2.6E-37 T 28-03-2018 CO704_RS13770 7032243a90ee808faad7077a62ff27d7 324 SUPERFAMILY SSF53822 61 321 2.36E-60 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS17475 962c4342edb4d5fe956c4602786f8846 224 Pfam PF03963 Flagellar hook capping protein - N-terminal region 19 73 1.6E-15 T 28-03-2018 IPR005648 Flagellar hook capping protein CO704_RS17475 962c4342edb4d5fe956c4602786f8846 224 Gene3D G3DSA:2.60.40.1310 46 196 6.2E-5 T 28-03-2018 CO704_RS17475 962c4342edb4d5fe956c4602786f8846 224 Pfam PF13861 FlgD Tudor-like domain 84 212 7.0E-8 T 28-03-2018 IPR025963 FlgD Tudor-like domain CO704_RS17475 962c4342edb4d5fe956c4602786f8846 224 Pfam PF13860 FlgD Ig-like domain 101 173 5.1E-13 T 28-03-2018 IPR025965 FlgD Ig-like domain CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 Pfam PF01965 DJ-1/PfpI family 4 176 1.1E-20 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 Gene3D G3DSA:1.10.10.60 210 266 1.5E-8 T 28-03-2018 CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 SUPERFAMILY SSF52317 3 195 1.41E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 SUPERFAMILY SSF46689 268 315 7.62E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 SUPERFAMILY SSF46689 216 264 2.15E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 Pfam PF12833 Helix-turn-helix domain 237 315 5.1E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 SMART SM00342 230 314 2.5E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 Gene3D G3DSA:3.40.50.880 1 209 2.1E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS11320 4ad921afeb84b5c4057604ddfb780126 317 Gene3D G3DSA:1.10.10.60 267 317 2.6E-8 T 28-03-2018 CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 Gene3D G3DSA:3.40.190.10 174 260 8.8E-19 T 28-03-2018 CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 Gene3D G3DSA:1.10.10.10 3 84 3.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 Gene3D G3DSA:3.40.190.10 89 173 2.9E-14 T 28-03-2018 CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 Pfam PF03466 LysR substrate binding domain 90 290 1.9E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 SUPERFAMILY SSF46785 4 109 4.21E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01470 8f0ed5d96a9836e2709c4647bc310793 311 SUPERFAMILY SSF53850 90 292 2.95E-40 T 28-03-2018 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Gene3D G3DSA:3.90.226.10 328 594 7.3E-60 T 28-03-2018 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 1.8E-127 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Pfam PF03572 Peptidase family S41 356 528 3.0E-53 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 SMART SM00228 246 323 1.2E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 SUPERFAMILY SSF50156 218 345 2.6E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Gene3D G3DSA:2.30.42.10 246 327 1.9E-15 T 28-03-2018 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 SUPERFAMILY SSF52096 194 264 1.82E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 SUPERFAMILY SSF52096 350 536 1.82E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 4.0E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 667 1.5E-40 T 28-03-2018 IPR020992 Tail specific protease, C-terminal CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 SMART SM00245 326 531 4.4E-79 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CO704_RS09050 619ae1c419a8675353d3b583c3ee634a 682 Gene3D G3DSA:3.30.750.44 157 245 1.3E-20 T 28-03-2018 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF55874 346 517 4.32E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF52172 530 657 8.9E-6 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF47384 277 358 4.51E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Pfam PF01627 Hpt domain 828 906 4.3E-12 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SMART SM00388 292 357 3.0E-25 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Pfam PF00072 Response regulator receiver domain 670 779 4.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 1.9E-54 T 28-03-2018 IPR019247 Histidine kinase BarA, N-terminal CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Gene3D G3DSA:1.20.120.160 805 917 2.1E-17 T 28-03-2018 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF52172 668 786 1.57E-35 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Gene3D G3DSA:3.30.565.10 361 529 2.7E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SMART SM00304 200 252 1.2E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Gene3D G3DSA:1.10.287.130 282 353 4.2E-20 T 28-03-2018 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SMART SM00448 668 781 6.0E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 8.1E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SMART SM00073 819 914 2.2E-15 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 4.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 1.0E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SMART SM00387 404 520 2.5E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 Gene3D G3DSA:3.40.50.2300 660 798 5.0E-36 T 28-03-2018 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF47226 764 777 6.93E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF47226 808 909 6.93E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS03535 5ae36a8df0eb0fa096ef61211a54059c 918 SUPERFAMILY SSF158472 200 249 7.32E-5 T 28-03-2018 CO704_RS06430 5ee8385e12f67e08174fcf8187718c6c 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 3.5E-25 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS06430 5ee8385e12f67e08174fcf8187718c6c 297 SUPERFAMILY SSF51735 1 296 8.28E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06430 5ee8385e12f67e08174fcf8187718c6c 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 1.1E-17 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 CO704_RS06430 5ee8385e12f67e08174fcf8187718c6c 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 7.9E-107 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 CO704_RS06430 5ee8385e12f67e08174fcf8187718c6c 297 Gene3D G3DSA:3.40.50.720 2 297 2.7E-38 T 28-03-2018 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 SUPERFAMILY SSF53067 251 482 1.48E-45 T 28-03-2018 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.6E-53 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 PIRSF PIRSF000538 1 489 4.6E-94 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 Gene3D G3DSA:3.30.420.40 246 489 4.7E-47 T 28-03-2018 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 1.2E-24 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 SUPERFAMILY SSF53067 3 252 2.92E-58 T 28-03-2018 CO704_RS15095 eeef8ff62eb7edc42609a6299cf80971 498 Gene3D G3DSA:3.30.420.40 1 245 2.2E-59 T 28-03-2018 CO704_RS13870 c1b64010d056fe24d63db19972d4ff38 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 160 3.1E-33 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CO704_RS13870 c1b64010d056fe24d63db19972d4ff38 196 PIRSF PIRSF030780 1 195 2.5E-117 T 28-03-2018 IPR016956 Inner membrane protein YdjM CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 Gene3D G3DSA:3.20.20.10 34 263 7.9E-48 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 4.1E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 4.1E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 4.1E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 4.1E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 1.7E-64 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 376 2.5E-25 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.6E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.6E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.6E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.6E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.6E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 Gene3D G3DSA:2.40.37.10 264 420 3.5E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 SUPERFAMILY SSF51419 25 277 1.02E-58 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 418 4.2E-137 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 SUPERFAMILY SSF50621 251 419 8.16E-57 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CO704_RS03295 2036076b1fcfe5e12ea28603220da53e 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.352 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 42.566 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 SUPERFAMILY SSF56655 2 326 8.32E-112 T 28-03-2018 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.2E-72 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 Gene3D G3DSA:3.40.190.80 194 329 2.4E-56 T 28-03-2018 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 Gene3D G3DSA:3.30.540.10 1 193 1.4E-62 T 28-03-2018 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 1.2E-82 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 28-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PIRSF PIRSF000904 1 331 1.8E-122 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS20725 9d091ea4c6a1942851fa8e032a5d5ff2 332 PIRSF PIRSF500210 1 330 2.0E-126 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 4.2E-59 T 28-03-2018 IPR023370 TsaA-like domain CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 Gene3D G3DSA:2.40.30.70 5 149 1.2E-52 T 28-03-2018 IPR023370 TsaA-like domain CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 28-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 SUPERFAMILY SSF118196 1 230 8.89E-87 T 28-03-2018 IPR023370 TsaA-like domain CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 3.9E-40 T 28-03-2018 IPR023370 TsaA-like domain CO704_RS19170 01f0a111cdd08e6864779d349b696930 235 Gene3D G3DSA:3.30.2310.10 150 231 2.5E-25 T 28-03-2018 CO704_RS17070 368418f59b868e380f97d76e52f85aea 148 SUPERFAMILY SSF46785 6 134 1.3E-44 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17070 368418f59b868e380f97d76e52f85aea 148 Pfam PF01475 Ferric uptake regulator family 10 130 1.4E-47 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CO704_RS17070 368418f59b868e380f97d76e52f85aea 148 Gene3D G3DSA:1.10.10.10 4 88 2.3E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.464 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 9.3E-12 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.4E-82 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 SUPERFAMILY SSF50249 15 102 5.57E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 Gene3D G3DSA:2.40.50.140 7 106 8.1E-18 T 28-03-2018 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.8E-210 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 SUPERFAMILY SSF55681 96 464 2.87E-97 T 28-03-2018 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15490 4774a73c86f78a9d439c270bc2aa4dca 466 Gene3D G3DSA:3.30.930.10 128 462 8.3E-96 T 28-03-2018 CO704_RS13400 039d3004bb03758a317af5d68dff5bf7 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 286 1.1E-136 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CO704_RS13400 039d3004bb03758a317af5d68dff5bf7 287 Gene3D G3DSA:3.40.1190.20 2 287 1.8E-62 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS13400 039d3004bb03758a317af5d68dff5bf7 287 Pfam PF08543 Phosphomethylpyrimidine kinase 75 253 3.6E-16 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CO704_RS13400 039d3004bb03758a317af5d68dff5bf7 287 SUPERFAMILY SSF53613 2 281 5.14E-75 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS13400 039d3004bb03758a317af5d68dff5bf7 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 2 287 54.491 T 28-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 SUPERFAMILY SSF52009 349 469 1.02E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 4.1E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Gene3D G3DSA:3.50.30.10 360 478 4.8E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Gene3D G3DSA:3.20.20.60 480 792 1.0E-102 T 28-03-2018 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 PIRSF PIRSF000854 4 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 789 8.4E-59 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 SUPERFAMILY SSF51621 469 790 5.23E-96 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Gene3D G3DSA:3.30.470.20 198 359 1.2E-46 T 28-03-2018 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 SUPERFAMILY SSF56059 7 387 8.83E-110 T 28-03-2018 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 1.6E-121 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CO704_RS13715 f36f97bd98179911a8f5ed7470c6518d 792 Gene3D G3DSA:3.30.1490.20 6 197 8.8E-55 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Gene3D G3DSA:3.40.50.300 2 271 1.5E-61 T 28-03-2018 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Gene3D G3DSA:3.40.50.300 272 528 2.1E-71 T 28-03-2018 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 SUPERFAMILY SSF52540 4 252 2.32E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Pfam PF00005 ABC transporter 290 441 2.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Pfam PF00005 ABC transporter 23 180 3.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 SUPERFAMILY SSF52540 273 511 6.83E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 SMART SM00382 31 230 4.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 SMART SM00382 298 490 5.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 494 524 6.7E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS19995 e4499a44a9a56fb4c3c414f116d719c2 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 254 0.25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS20405 4995463ea85b3279489966171bc9321f 142 SUPERFAMILY SSF51182 22 137 2.55E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS20405 4995463ea85b3279489966171bc9321f 142 Pfam PF07883 Cupin domain 43 110 1.1E-15 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS20405 4995463ea85b3279489966171bc9321f 142 Gene3D G3DSA:2.60.120.10 5 126 1.7E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS15050 ba49a4c2cffe70592d07a36febab6dff 149 Pfam PF01638 HxlR-like helix-turn-helix 19 105 1.8E-20 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CO704_RS15050 ba49a4c2cffe70592d07a36febab6dff 149 SUPERFAMILY SSF46785 5 142 8.56E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15050 ba49a4c2cffe70592d07a36febab6dff 149 Gene3D G3DSA:1.10.10.10 1 149 2.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06305 0771dbd9f94fdf47a758401baa165d15 182 Pfam PF04315 Elongation factor P hydroxylase 13 173 1.3E-78 T 28-03-2018 IPR007411 Elongation factor P hydroxylase CO704_RS21000 9b913e28d5f612c26afc202687035482 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 4.2E-19 T 28-03-2018 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.2E-23 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 SUPERFAMILY SSF46548 139 256 3.61E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 1.0E-152 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 Gene3D G3DSA:3.30.70.20 156 199 0.0068 T 28-03-2018 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS21000 9b913e28d5f612c26afc202687035482 379 Gene3D G3DSA:3.30.70.20 200 369 5.7E-11 T 28-03-2018 CO704_RS21000 9b913e28d5f612c26afc202687035482 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.078 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 Gene3D G3DSA:3.90.1150.10 276 416 2.6E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 PIRSF PIRSF000412 1 417 2.9E-175 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.225 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.3E-189 T 28-03-2018 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 Gene3D G3DSA:3.40.640.10 37 275 7.2E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CO704_RS04815 49e9a1fcdc42c65a7b5af1de2ca4ec33 417 SUPERFAMILY SSF53383 6 416 3.4E-184 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 Gene3D G3DSA:1.20.1250.20 3 200 1.9E-20 T 28-03-2018 CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 1.9E-129 T 28-03-2018 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 Pfam PF07690 Major Facilitator Superfamily 23 230 7.0E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 Pfam PF07690 Major Facilitator Superfamily 245 386 2.8E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 SUPERFAMILY SSF103473 7 388 2.62E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24525 ba3cf70b87f48d7c8198ab36cf00452c 402 Gene3D G3DSA:1.20.1250.20 209 401 4.3E-20 T 28-03-2018 CO704_RS20755 188908c8f5daabeb02c08fa53dc85a5a 578 Gene3D G3DSA:2.40.160.50 221 577 1.0E-61 T 28-03-2018 CO704_RS20755 188908c8f5daabeb02c08fa53dc85a5a 578 Pfam PF01103 Surface antigen 281 574 3.2E-33 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CO704_RS20755 188908c8f5daabeb02c08fa53dc85a5a 578 Pfam PF07244 Surface antigen variable number repeat 190 251 4.5E-8 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CO704_RS20755 188908c8f5daabeb02c08fa53dc85a5a 578 Pfam PF17243 POTRA domain TamA domain 1 26 100 3.2E-20 T 28-03-2018 IPR035243 TamA, POTRA domain 1 CO704_RS20755 188908c8f5daabeb02c08fa53dc85a5a 578 Gene3D G3DSA:3.10.20.310 103 189 4.1E-10 T 28-03-2018 CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 Gene3D G3DSA:3.40.50.150 18 247 9.7E-43 T 28-03-2018 CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 SUPERFAMILY SSF53335 20 242 5.22E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.743 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 Pfam PF13649 Methyltransferase domain 60 158 1.0E-13 T 28-03-2018 CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 PIRSF PIRSF006325 1 243 8.2E-133 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CO704_RS08820 a6a169d37a592191b51bf155a01467d5 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.2E-131 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CO704_RS13790 f68a80e2667ce8edec971f19a86950dd 326 Gene3D G3DSA:1.10.3470.10 1 326 1.3E-61 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS13790 f68a80e2667ce8edec971f19a86950dd 326 SUPERFAMILY SSF81345 5 323 2.88E-84 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS13790 f68a80e2667ce8edec971f19a86950dd 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 31.619 T 28-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 CO704_RS13790 f68a80e2667ce8edec971f19a86950dd 326 Pfam PF01032 FecCD transport family 23 323 6.9E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 Pfam PF02311 AraC-like ligand binding domain 20 148 2.4E-17 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 SMART SM00342 188 270 5.6E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 Pfam PF12833 Helix-turn-helix domain 194 270 1.7E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 SUPERFAMILY SSF46689 171 222 1.88E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 Gene3D G3DSA:1.10.10.60 229 274 1.2E-12 T 28-03-2018 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 SUPERFAMILY SSF51215 22 140 6.41E-18 T 28-03-2018 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 SUPERFAMILY SSF46689 224 272 1.39E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04050 1a17b80c77fb1fb00c9a96b087ec96a2 282 Gene3D G3DSA:2.60.120.10 5 228 1.4E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PIRSF PIRSF036388 1 428 9.2E-235 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.898 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 SUPERFAMILY SSF53187 107 426 4.39E-102 T 28-03-2018 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.0E-47 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.0E-47 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.0E-47 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.0E-47 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.0E-47 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 Gene3D G3DSA:3.40.630.10 93 428 1.8E-111 T 28-03-2018 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 Pfam PF12404 Peptidase 5 81 7.6E-35 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CO704_RS04945 727f69c00ac910da6b7ddd7cd1330641 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 5.0E-103 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS19345 077264afcd18a6ace968b469063cdb69 232 Gene3D G3DSA:3.40.50.1580 1 232 2.9E-54 T 28-03-2018 CO704_RS19345 077264afcd18a6ace968b469063cdb69 232 Pfam PF01048 Phosphorylase superfamily 3 226 3.5E-49 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS19345 077264afcd18a6ace968b469063cdb69 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 229 2.5E-127 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS19345 077264afcd18a6ace968b469063cdb69 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.068 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CO704_RS19345 077264afcd18a6ace968b469063cdb69 232 SUPERFAMILY SSF53167 1 229 1.57E-74 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 Gene3D G3DSA:3.30.1320.10 1 79 1.2E-33 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.7E-29 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 Pfam PF00886 Ribosomal protein S16 8 68 8.2E-25 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 SUPERFAMILY SSF54565 1 78 1.96E-29 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS04395 cf8c4aada46f50e865ac19e54d7fed9d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.288 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS10770 f89dde615fb7289b5c5d19809f3e043b 399 Pfam PF07690 Major Facilitator Superfamily 19 349 1.0E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS10770 f89dde615fb7289b5c5d19809f3e043b 399 Gene3D G3DSA:1.20.1250.20 2 197 2.2E-26 T 28-03-2018 CO704_RS10770 f89dde615fb7289b5c5d19809f3e043b 399 SUPERFAMILY SSF103473 6 387 7.32E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10770 f89dde615fb7289b5c5d19809f3e043b 399 Gene3D G3DSA:1.20.1250.20 198 399 1.4E-18 T 28-03-2018 CO704_RS10770 f89dde615fb7289b5c5d19809f3e043b 399 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.273 T 28-03-2018 IPR023495 Sugar efflux transporter, putative CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 25 464 4.9E-148 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 Pfam PF02397 Bacterial sugar transferase 274 456 3.4E-65 T 28-03-2018 IPR003362 Bacterial sugar transferase CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 Gene3D G3DSA:3.40.50.720 141 263 7.8E-17 T 28-03-2018 CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 SUPERFAMILY SSF51735 143 267 1.57E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 Pfam PF13727 CoA-binding domain 66 238 1.6E-35 T 28-03-2018 CO704_RS07510 9d92ce856087a5d47cbf0bc89a5ce089 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 2.0E-166 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PIRSF PIRSF000207 1 601 8.4E-279 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 601 52.814 T 28-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Pfam PF00667 FAD binding domain 232 426 8.9E-24 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Gene3D G3DSA:3.40.50.360 53 221 2.4E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00369 Flavodoxin signature 113 124 1.3E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00369 Flavodoxin signature 169 188 1.3E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00369 Flavodoxin signature 145 155 1.3E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00369 Flavodoxin signature 65 78 1.3E-13 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 SUPERFAMILY SSF52343 446 601 7.2E-51 T 28-03-2018 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Pfam PF00258 Flavodoxin 67 195 1.4E-30 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 SUPERFAMILY SSF63380 229 448 2.65E-65 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Gene3D G3DSA:2.40.30.10 222 440 2.5E-47 T 28-03-2018 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 SUPERFAMILY SSF52218 64 210 3.35E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Gene3D G3DSA:3.40.50.80 444 600 2.5E-35 T 28-03-2018 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 Pfam PF00175 Oxidoreductase NAD-binding domain 459 565 2.4E-19 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 496 507 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 492 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 421 430 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 558 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 527 543 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 458 477 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 395 2.2E-28 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS03645 9b97acdb4938d8e96522c3d4ac72bcf1 601 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 601 6.9E-279 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 SUPERFAMILY SSF52440 1 113 1.22E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS01390 e59bc6450581a869988b86464761a71c 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Gene3D G3DSA:3.30.1490.20 124 209 5.5E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.7E-83 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Gene3D G3DSA:3.30.470.20 210 444 1.7E-95 T 28-03-2018 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Gene3D G3DSA:3.40.50.20 1 123 7.8E-52 T 28-03-2018 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 SMART SM00878 336 441 5.7E-65 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 SUPERFAMILY SSF51246 332 444 1.26E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 SUPERFAMILY SSF56059 83 347 2.12E-68 T 28-03-2018 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.2E-39 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 8.6E-248 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS01390 e59bc6450581a869988b86464761a71c 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.2E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.9E-81 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 SUPERFAMILY SSF56601 228 560 2.19E-89 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 214 1.6E-16 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 Gene3D G3DSA:3.40.710.10 229 580 9.2E-83 T 28-03-2018 CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 SUPERFAMILY SSF56519 56 227 2.35E-43 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS09100 16a34cf70ad491f11e1552c32f8d9be0 581 Gene3D G3DSA:3.90.1310.10 29 228 2.1E-44 T 28-03-2018 CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SMART SM00488 18 312 0.0014 T 28-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SMART SM00491 544 676 1.8E-34 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 Pfam PF13307 Helicase C-terminal domain 533 687 2.2E-23 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SUPERFAMILY SSF52540 199 270 1.97E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SUPERFAMILY SSF52540 451 669 1.97E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SUPERFAMILY SSF52540 46 97 1.97E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 Pfam PF06733 DEAD_2 202 264 4.5E-7 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 SMART SM00487 23 303 0.002 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS16040 414c4a9445a2453de4448ba4b31adfcf 719 Gene3D G3DSA:3.40.50.300 24 483 4.5E-26 T 28-03-2018 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 1.5E-218 T 28-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 8.5E-33 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 Pfam PF00367 phosphotransferase system, EIIB 11 40 7.1E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 SUPERFAMILY SSF55604 10 83 1.7E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.1E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS01930 f3f3f6c049711b7b5c00554f3e1f276d 472 Gene3D G3DSA:3.30.1360.60 4 78 8.0E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.25 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Pfam PF13522 Glutamine amidotransferase domain 61 180 6.3E-21 T 28-03-2018 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Gene3D G3DSA:3.40.50.10490 240 457 1.2E-60 T 28-03-2018 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Gene3D G3DSA:3.60.20.10 2 239 7.9E-68 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Pfam PF01380 SIS domain 289 418 3.9E-34 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Pfam PF01380 SIS domain 462 591 2.1E-30 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 8.0E-268 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 SUPERFAMILY SSF56235 2 233 1.37E-74 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 Gene3D G3DSA:3.40.50.10490 458 607 4.2E-52 T 28-03-2018 CO704_RS24150 b1ca32df9e240cd5d65b764ab1edba39 609 SUPERFAMILY SSF53697 245 609 7.33E-115 T 28-03-2018 CO704_RS25645 b102bfbe44abb62be4b4694ca8b3d4e4 117 SUPERFAMILY SSF54637 11 110 5.35E-14 T 28-03-2018 IPR029069 HotDog domain CO704_RS25645 b102bfbe44abb62be4b4694ca8b3d4e4 117 PIRSF PIRSF030962 1 117 5.3E-46 T 28-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS25645 b102bfbe44abb62be4b4694ca8b3d4e4 117 Gene3D G3DSA:3.10.129.10 5 117 2.5E-16 T 28-03-2018 CO704_RS08680 85a2f94725851ea6bb8d898edf18995e 167 SUPERFAMILY SSF47240 3 156 6.77E-29 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS08680 85a2f94725851ea6bb8d898edf18995e 167 Gene3D G3DSA:1.20.1260.10 3 162 3.4E-23 T 28-03-2018 IPR012347 Ferritin-related CO704_RS08680 85a2f94725851ea6bb8d898edf18995e 167 Pfam PF00210 Ferritin-like domain 7 142 5.3E-20 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 SUPERFAMILY SSF47384 194 271 9.81E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 5.9E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 SMART SM00388 211 271 4.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 Gene3D G3DSA:3.30.565.10 277 429 1.2E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 Gene3D G3DSA:1.10.287.130 201 267 1.4E-9 T 28-03-2018 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 SMART SM00387 317 427 5.9E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 425 1.0E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 SMART SM00304 158 210 6.0E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS13240 0d305d4e546c9b82dfa8ee556d6b013f 431 SUPERFAMILY SSF55874 260 425 3.41E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 Pfam PF01546 Peptidase family M20/M25/M40 72 480 2.1E-20 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 Pfam PF07687 Peptidase dimerisation domain 200 291 3.3E-6 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 Gene3D G3DSA:3.40.630.10 5 483 9.7E-51 T 28-03-2018 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PIRSF PIRSF016599 1 485 1.4E-208 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 4.5E-100 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 SUPERFAMILY SSF55031 200 295 4.36E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 SUPERFAMILY SSF53187 10 182 1.61E-64 T 28-03-2018 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 SUPERFAMILY SSF53187 397 481 1.61E-64 T 28-03-2018 CO704_RS18970 43a3a18e8bb53bca5cfc5c2ae708cee4 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 1.0E-179 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CO704_RS17695 6fd0a8c8afcd687823865ff23780902f 90 Gene3D G3DSA:3.90.820.10 22 83 0.091 T 28-03-2018 CO704_RS09085 33387080b2c30977a45e53035ec30b34 333 Pfam PF12706 Beta-lactamase superfamily domain 90 286 4.2E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS09085 33387080b2c30977a45e53035ec30b34 333 PIRSF PIRSF038896 6 331 2.0E-99 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CO704_RS09085 33387080b2c30977a45e53035ec30b34 333 SUPERFAMILY SSF56281 72 306 2.62E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS09085 33387080b2c30977a45e53035ec30b34 333 Gene3D G3DSA:3.60.15.10 33 333 1.5E-60 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 Pfam PF03176 MMPL family 253 397 1.6E-8 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 SUPERFAMILY SSF82866 639 767 3.79E-15 T 28-03-2018 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 SUPERFAMILY SSF82866 62 81 1.16E-21 T 28-03-2018 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 SUPERFAMILY SSF82866 220 405 1.16E-21 T 28-03-2018 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 Gene3D G3DSA:1.20.1640.10 715 767 0.091 T 28-03-2018 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 Gene3D G3DSA:1.20.1640.10 606 709 4.9E-9 T 28-03-2018 CO704_RS25665 6a13844c0961307bc094149d0539c56f 774 Gene3D G3DSA:1.20.1640.10 207 407 5.2E-21 T 28-03-2018 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 SUPERFAMILY SSF53067 166 346 1.3E-44 T 28-03-2018 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 302 316 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 SUPERFAMILY SSF53067 8 161 4.53E-47 T 28-03-2018 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 Gene3D G3DSA:3.30.420.40 5 177 1.9E-53 T 28-03-2018 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 7 20 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 118 138 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 443 459 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 58 66 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 299 315 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 35 47 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 177 187 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 330 350 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 PRINTS PR00301 70kDa heat shock protein signature 355 374 5.3E-46 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 Gene3D G3DSA:3.30.420.40 178 329 1.4E-36 T 28-03-2018 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 Pfam PF00012 Hsp70 protein 8 563 4.5E-133 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 Gene3D G3DSA:2.60.34.10 336 549 1.0E-41 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 11 18 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 SUPERFAMILY SSF100920 353 503 1.31E-33 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS18220 4f833d11c37e6d2309d9fb4b5c7ef4f0 566 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 171 184 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 SUPERFAMILY SSF52317 3 191 3.23E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 SUPERFAMILY SSF52418 269 527 4.71E-89 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.8E-44 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 4.3E-34 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Gene3D G3DSA:3.40.50.880 1 193 6.0E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 SUPERFAMILY SSF47648 200 266 3.79E-17 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Pfam PF00591 Glycosyl transferase family, a/b domain 272 521 3.2E-99 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 527 2.0E-127 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 2.4E-54 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 263 4.4E-15 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 3.5E-5 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 3.5E-5 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Gene3D G3DSA:3.40.1030.10 276 529 1.4E-87 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.4E-13 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.4E-13 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.4E-13 T 28-03-2018 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.385 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CO704_RS10260 880b12e93c7285c14456d88c79297f87 531 Gene3D G3DSA:1.20.970.10 194 275 8.2E-17 T 28-03-2018 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 Gene3D G3DSA:1.20.1250.20 196 390 3.5E-17 T 28-03-2018 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 SUPERFAMILY SSF103473 2 390 1.7E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 74 98 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 101 122 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 334 357 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 274 295 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 43 62 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 246 266 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 299 319 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 159 179 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 217 234 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 131 153 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 PRINTS PR01035 Tetracycline resistance protein signature 364 383 4.4E-97 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 Gene3D G3DSA:1.20.1250.20 1 190 9.0E-39 T 28-03-2018 CO704_RS03225 99f982c6b9c72755f2e6c74fdb664f7b 397 Pfam PF07690 Major Facilitator Superfamily 8 222 4.4E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Gene3D G3DSA:2.60.34.10 387 528 2.4E-48 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Gene3D G3DSA:3.30.420.40 20 208 2.2E-57 T 28-03-2018 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 SUPERFAMILY SSF53067 200 377 1.84E-51 T 28-03-2018 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Pfam PF00012 Hsp70 protein 22 600 2.4E-200 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 SUPERFAMILY SSF100934 504 615 2.35E-36 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.519 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Gene3D G3DSA:1.20.1270.10 529 615 4.4E-11 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 SUPERFAMILY SSF53067 20 196 4.86E-51 T 28-03-2018 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 6.7E-272 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 Gene3D G3DSA:3.30.420.40 209 358 7.0E-40 T 28-03-2018 CO704_RS04930 45a83ed74eaa56eac352912bd1823d12 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS15405 f86a143c55941617f4945be952e7b554 356 Gene3D G3DSA:3.40.50.300 3 270 6.6E-73 T 28-03-2018 CO704_RS15405 f86a143c55941617f4945be952e7b554 356 SUPERFAMILY SSF50331 243 354 2.49E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS15405 f86a143c55941617f4945be952e7b554 356 SMART SM00382 28 217 2.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15405 f86a143c55941617f4945be952e7b554 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15405 f86a143c55941617f4945be952e7b554 356 Pfam PF00005 ABC transporter 19 167 6.2E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15405 f86a143c55941617f4945be952e7b554 356 SUPERFAMILY SSF52540 4 248 4.93E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 SMART SM00855 2 156 2.4E-17 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 PIRSF PIRSF000709 2 156 2.5E-12 T 28-03-2018 CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 SUPERFAMILY SSF53254 2 201 5.89E-49 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 195 1.3E-50 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS04025 93d26f448d7d5fb1fd5a2c77ca25e51f 203 Gene3D G3DSA:3.40.50.1240 1 203 6.9E-48 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Pfam PF01336 OB-fold nucleic acid binding domain 998 1071 2.2E-7 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 SMART SM00481 7 74 2.4E-27 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Gene3D G3DSA:3.20.20.140 1 247 1.1E-39 T 28-03-2018 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 SUPERFAMILY SSF89550 6 263 7.26E-17 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Gene3D G3DSA:2.40.50.140 979 1074 1.5E-15 T 28-03-2018 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Gene3D G3DSA:1.10.150.280 779 894 9.2E-9 T 28-03-2018 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.0E-178 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Pfam PF02811 PHP domain 8 171 1.9E-42 T 28-03-2018 IPR004013 PHP domain GO:0003824 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 3.9E-24 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS19235 5fd48fac73fc070b3a02a5d5a447daa0 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS20215 28323f34bd60707e0a32366b7e00e582 304 SUPERFAMILY SSF103481 190 292 4.32E-10 T 28-03-2018 CO704_RS20215 28323f34bd60707e0a32366b7e00e582 304 Pfam PF00892 EamA-like transporter family 12 143 1.9E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS20215 28323f34bd60707e0a32366b7e00e582 304 Pfam PF00892 EamA-like transporter family 154 289 4.6E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS20215 28323f34bd60707e0a32366b7e00e582 304 SUPERFAMILY SSF103481 51 144 1.05E-10 T 28-03-2018 CO704_RS15535 6076a57b33980fdff9d0faec7f235f2b 258 Pfam PF13847 Methyltransferase domain 45 196 1.5E-18 T 28-03-2018 IPR025714 Methyltransferase domain CO704_RS15535 6076a57b33980fdff9d0faec7f235f2b 258 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 254 42.833 T 28-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CO704_RS15535 6076a57b33980fdff9d0faec7f235f2b 258 SUPERFAMILY SSF53335 6 245 4.45E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15535 6076a57b33980fdff9d0faec7f235f2b 258 Gene3D G3DSA:3.40.50.150 8 258 1.2E-51 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00532 3 448 1.8E-290 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00278 480 499 1.9 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00278 544 563 330.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00278 446 465 24.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00278 512 531 550.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF14520 Helix-hairpin-helix domain 446 502 3.4E-6 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SUPERFAMILY SSF47781 403 584 1.89E-59 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SUPERFAMILY SSF50249 318 400 6.0E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SUPERFAMILY SSF52113 597 669 4.25E-19 T 28-03-2018 IPR001357 BRCT domain CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 666 2.3E-272 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.0E-21 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:2.40.50.140 317 390 5.7E-35 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:3.40.50.10190 572 671 6.8E-25 T 28-03-2018 IPR001357 BRCT domain CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 3.7E-36 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:1.10.150.20 432 505 1.6E-25 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SMART SM00292 596 671 9.9E-13 T 28-03-2018 IPR001357 BRCT domain CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 4.3E-11 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:3.30.470.30 119 252 6.0E-54 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 PIRSF PIRSF001604 1 672 1.1E-255 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 8.8E-139 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:1.10.150.20 507 571 4.3E-23 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 SUPERFAMILY SSF56091 3 316 2.67E-123 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Hamap MF_01588 DNA ligase [ligA]. 2 670 54.367 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Gene3D G3DSA:1.10.287.610 1 67 1.5E-26 T 28-03-2018 CO704_RS05855 00e5905009d94dbd3e92d21f00a9dfed 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 669 2.2E-11 T 28-03-2018 IPR001357 BRCT domain CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 SUPERFAMILY SSF54980 292 370 1.73E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.7E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 SUPERFAMILY SSF52540 2 235 5.56E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.391 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Gene3D G3DSA:2.40.30.10 188 287 7.0E-26 T 28-03-2018 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Gene3D G3DSA:3.30.70.870 288 367 1.2E-27 T 28-03-2018 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Gene3D G3DSA:3.40.50.300 1 185 8.0E-37 T 28-03-2018 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 SUPERFAMILY SSF54980 399 493 3.93E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.3E-300 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 168 4.0E-16 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.2E-48 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Pfam PF00679 Elongation factor G C-terminus 399 482 1.7E-19 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 9.7E-12 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS04600 823b7b4eba533d23aa491ffce6d65686 599 Gene3D G3DSA:3.30.70.240 390 549 6.3E-25 T 28-03-2018 CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 Gene3D G3DSA:2.20.150.10 11 45 4.9E-5 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 2.4E-91 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 SUPERFAMILY SSF53613 4 296 3.59E-63 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 Pfam PF00294 pfkB family carbohydrate kinase 15 295 8.0E-59 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 Gene3D G3DSA:3.40.1190.20 46 307 5.5E-46 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 PIRSF PIRSF000535 1 308 3.0E-100 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CO704_RS13845 a4b32ef7ac1380c8e0ebac4ef53cd031 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 SUPERFAMILY SSF55347 140 294 4.09E-23 T 28-03-2018 CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 SUPERFAMILY SSF51735 6 157 3.84E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 Gene3D G3DSA:3.30.360.10 142 348 4.4E-30 T 28-03-2018 CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 Gene3D G3DSA:3.40.50.720 3 141 1.2E-39 T 28-03-2018 CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 239 2.4E-10 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS02090 fc60339a0f07919b56b84b8b012d14ad 352 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 129 2.3E-29 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 Gene3D G3DSA:3.30.360.10 163 308 5.1E-48 T 28-03-2018 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 SUPERFAMILY SSF55347 154 308 1.12E-49 T 28-03-2018 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.6E-127 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 39.231 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 5.2E-17 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 Gene3D G3DSA:3.40.50.720 1 162 8.3E-46 T 28-03-2018 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 SUPERFAMILY SSF51735 1 170 6.95E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 SMART SM00859 3 146 4.4E-55 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS23530 2f15ded88171289a263dd1bef890f2e2 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 145 1.9E-33 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 SMART SM00895 88 211 1.7E-10 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 Pfam PF07729 FCD domain 89 210 3.7E-17 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 SUPERFAMILY SSF48008 84 215 1.49E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 SUPERFAMILY SSF46785 18 82 6.31E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 Gene3D G3DSA:1.20.120.530 75 225 2.7E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 78 4.7E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 SMART SM00345 20 78 1.4E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19050 ec474da6b2375e2e14d22364f53817f4 237 Gene3D G3DSA:1.10.10.10 7 74 2.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22945 24ea4620c45a7ed38034c4efe3b70b80 165 Pfam PF00466 Ribosomal protein L10 5 101 3.2E-25 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CO704_RS22945 24ea4620c45a7ed38034c4efe3b70b80 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 28-03-2018 CO704_RS22945 24ea4620c45a7ed38034c4efe3b70b80 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.51 T 28-03-2018 IPR022973 Ribosomal protein L10 CO704_RS22945 24ea4620c45a7ed38034c4efe3b70b80 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS22945 24ea4620c45a7ed38034c4efe3b70b80 165 SUPERFAMILY SSF160369 4 160 3.92E-47 T 28-03-2018 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 SUPERFAMILY SSF52540 10 220 9.95E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 1.7E-156 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 Gene3D G3DSA:2.40.50.100 273 349 3.5E-20 T 28-03-2018 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 Pfam PF03459 TOBE domain 290 350 6.2E-15 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 SMART SM00382 23 206 2.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 Gene3D G3DSA:3.40.50.300 16 256 3.8E-52 T 28-03-2018 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 SUPERFAMILY SSF50331 235 350 3.61E-21 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 Pfam PF00005 ABC transporter 20 156 1.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16510 9c0f03cad699bcc5392a8712fd76e2bf 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 350 3.8E-19 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 Gene3D G3DSA:1.10.10.10 1 89 7.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 Pfam PF03466 LysR substrate binding domain 86 290 2.3E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 Gene3D G3DSA:3.40.190.10 90 173 6.0E-15 T 28-03-2018 CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 SUPERFAMILY SSF46785 1 85 2.59E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 SUPERFAMILY SSF53850 87 291 1.37E-37 T 28-03-2018 CO704_RS04550 dbd8eaf131b926b4c3cd72af3f8a3efa 294 Gene3D G3DSA:3.40.190.10 174 262 6.4E-14 T 28-03-2018 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 9.7E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 76 6.8E-18 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 SUPERFAMILY SSF47757 14 91 1.44E-24 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 277 1.2E-57 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 SMART SM00138 24 284 2.8E-120 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 Gene3D G3DSA:3.40.50.150 91 284 4.4E-45 T 28-03-2018 CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 PIRSF PIRSF000410 6 285 3.7E-99 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 Gene3D G3DSA:1.10.155.10 16 90 1.5E-25 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CO704_RS08755 3dd03bfcae664979f14bd44cae63e6c6 288 SUPERFAMILY SSF53335 92 281 1.36E-57 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS04430 249bb513008641b479b1d5a4fcec0bc7 356 Pfam PF00793 DAHP synthetase I family 39 340 1.8E-107 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS04430 249bb513008641b479b1d5a4fcec0bc7 356 SUPERFAMILY SSF51569 8 345 5.13E-135 T 28-03-2018 CO704_RS04430 249bb513008641b479b1d5a4fcec0bc7 356 Gene3D G3DSA:3.20.20.70 9 355 1.5E-128 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS04430 249bb513008641b479b1d5a4fcec0bc7 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 348 1.5E-171 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS04430 249bb513008641b479b1d5a4fcec0bc7 356 PIRSF PIRSF001361 1 354 1.9E-163 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS09660 cd0037aa19fe6459e264fca2443a9118 207 Gene3D G3DSA:2.50.20.10 30 207 4.8E-56 T 28-03-2018 CO704_RS09660 cd0037aa19fe6459e264fca2443a9118 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 2.2E-81 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CO704_RS09660 cd0037aa19fe6459e264fca2443a9118 207 SUPERFAMILY SSF89392 34 206 6.08E-54 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CO704_RS09660 cd0037aa19fe6459e264fca2443a9118 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.032 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CO704_RS09660 cd0037aa19fe6459e264fca2443a9118 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.2E-47 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 SUPERFAMILY SSF69349 439 617 1.02E-25 T 28-03-2018 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 29 503 2.2E-98 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 Gene3D G3DSA:3.55.50.10 105 196 1.5E-27 T 28-03-2018 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 SUPERFAMILY SSF69279 22 192 1.4E-44 T 28-03-2018 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 SUPERFAMILY SSF69279 278 359 2.55E-5 T 28-03-2018 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 Pfam PF05954 Phage late control gene D protein (GPD) 35 332 1.3E-54 T 28-03-2018 CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 520 5.3E-139 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 Gene3D G3DSA:2.40.50.230 367 449 7.8E-36 T 28-03-2018 IPR006531 Gp5 N-terminal CO704_RS17730 fb9e99dd2ec6f2478cc0eb7ab97e309b 675 SUPERFAMILY SSF69255 362 449 2.88E-33 T 28-03-2018 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 Gene3D G3DSA:3.40.366.10 185 309 3.6E-32 T 28-03-2018 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 PIRSF PIRSF000446 1 309 1.7E-141 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 SUPERFAMILY SSF52151 4 122 1.44E-83 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 SUPERFAMILY SSF52151 190 308 1.44E-83 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 Gene3D G3DSA:3.40.366.10 1 184 3.0E-52 T 28-03-2018 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 SUPERFAMILY SSF55048 128 197 1.7E-17 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.8E-47 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 7.8E-131 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CO704_RS14555 ee4403ed0d8ba975e8456e825e85b1b1 309 Pfam PF00698 Acyl transferase domain 7 286 8.4E-39 T 28-03-2018 IPR014043 Acyl transferase CO704_RS02460 57ae4ae1d785452639af2ae0a8b85894 191 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 5.9E-69 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CO704_RS02460 57ae4ae1d785452639af2ae0a8b85894 191 Gene3D G3DSA:3.40.50.1820 1 189 6.0E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS02460 57ae4ae1d785452639af2ae0a8b85894 191 SUPERFAMILY SSF53474 2 188 2.17E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 Gene3D G3DSA:3.10.105.10 304 502 5.7E-61 T 28-03-2018 CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 PIRSF PIRSF002741 6 532 1.9E-109 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 450 2.2E-99 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 SUPERFAMILY SSF53850 28 523 9.88E-148 T 28-03-2018 CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 Gene3D G3DSA:3.40.190.10 166 303 1.9E-38 T 28-03-2018 CO704_RS10680 ad4c7ddb0101fa4aec5f70e1077aeafd 532 Gene3D G3DSA:3.90.76.10 52 165 2.4E-26 T 28-03-2018 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 7.3E-21 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Gene3D G3DSA:3.40.50.980 267 429 1.2E-37 T 28-03-2018 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Pfam PF00501 AMP-binding enzyme 83 522 2.5E-94 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 28-03-2018 IPR020845 AMP-binding, conserved site CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Gene3D G3DSA:3.30.300.30 518 650 7.1E-28 T 28-03-2018 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 SUPERFAMILY SSF56801 11 643 1.83E-189 T 28-03-2018 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.938 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Gene3D G3DSA:2.30.38.10 430 515 5.1E-10 T 28-03-2018 CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.0E-26 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CO704_RS22465 bda966acde236f496cb5fda3fb36f581 652 Gene3D G3DSA:3.40.50.980 74 266 6.3E-54 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 1962 2063 8.5E-17 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 761 862 2.5E-15 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 2359 2458 2.8E-16 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 3159 3265 8.7E-19 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 1557 1655 2.5E-21 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 2560 2663 2.7E-17 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 3658 3740 2.2E-20 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 1357 1459 8.6E-20 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1290 960 1059 1.7E-20 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 SUPERFAMILY SSF51120 5177 5345 1.7E-12 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 3266 3362 2.1E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 467 566 3.7E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 368 466 1.2E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2265 2358 6.1E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2664 2763 8.2E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 865 959 1.8E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1767 1864 8.9E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2165 2264 4.6E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 567 664 2.7E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2065 2164 3.8E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 170 266 2.6E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1462 1556 2.6E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2964 3062 5.6E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2764 2863 2.6E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 3462 3562 7.0E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1164 1261 5.6E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 3063 3158 2.6E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1661 1766 8.3E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 3563 3657 1.0E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1865 1961 8.6E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2464 2559 7.5E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 665 760 2.2E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 2864 2963 6.3E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 3363 3461 2.2E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 268 367 3.1E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1064 1163 1.5E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.10 1262 1356 6.1E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 439 460 5.3E-4 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 1738 1758 0.047 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4143 4170 0.027 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 3833 3852 0.048 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4248 4276 0.13 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 2836 2853 0.013 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4041 4064 0.097 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4459 4487 0.0025 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 3734 3752 0.12 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 3434 3457 0.0046 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 2537 2560 0.48 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4563 4588 0.0023 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 2337 2362 0.015 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF12245 Bacterial Ig-like domain (group 3) 4356 4383 0.01 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 SUPERFAMILY SSF69318 4758 5070 2.62E-37 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 4763 4827 8.2E-7 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 4878 4950 8.9E-10 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 4991 5054 2.9E-7 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4357 4459 8.1E-16 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 3741 3831 1.2E-19 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4144 4247 5.5E-13 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4460 4567 3.1E-13 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 3832 3931 1.9E-18 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4037 4143 3.2E-13 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 3932 4036 7.0E-9 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4568 4718 2.5E-13 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Gene3D G3DSA:2.60.40.1310 4248 4356 7.2E-17 T 28-03-2018 CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 Pfam PF13750 Bacterial Ig-like domain (group 3) 1031 1161 1.2E-4 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS11865 4da1f4017b064685ca742a84363f760a 5414 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5309 5411 2.2E-7 T 28-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CO704_RS19205 278e3793363fa78bbb9519a130ebaadc 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 1.1E-27 T 28-03-2018 IPR009778 Modulator of Rho-dependent transcription termination CO704_RS19205 278e3793363fa78bbb9519a130ebaadc 86 Gene3D G3DSA:2.30.30.400 10 83 3.3E-26 T 28-03-2018 CO704_RS19205 278e3793363fa78bbb9519a130ebaadc 86 SUPERFAMILY SSF101744 1 84 1.57E-28 T 28-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CO704_RS23055 8d080bc72b86a0ad9dba88f1baaf7c6a 443 Pfam PF00557 Metallopeptidase family M24 169 428 8.7E-42 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS23055 8d080bc72b86a0ad9dba88f1baaf7c6a 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.552 T 28-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CO704_RS23055 8d080bc72b86a0ad9dba88f1baaf7c6a 443 Gene3D G3DSA:3.90.230.10 145 442 1.7E-50 T 28-03-2018 CO704_RS23055 8d080bc72b86a0ad9dba88f1baaf7c6a 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CO704_RS23055 8d080bc72b86a0ad9dba88f1baaf7c6a 443 SUPERFAMILY SSF55920 163 438 3.01E-53 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 Gene3D G3DSA:3.30.70.940 1 100 5.9E-20 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 SMART SM00738 1 100 2.3E-32 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 SUPERFAMILY SSF82679 1 100 2.09E-29 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 Pfam PF02357 Transcription termination factor nusG 3 96 5.6E-21 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 5.2E-65 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 47.972 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CO704_RS23085 1b89ba686128f9ed33e48790747cbdeb 162 Gene3D G3DSA:2.30.30.30 111 162 1.6E-4 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 SUPERFAMILY SSF53822 63 330 3.2E-44 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 Gene3D G3DSA:1.10.260.40 3 55 1.1E-19 T 28-03-2018 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 Gene3D G3DSA:3.40.50.2300 175 307 3.8E-30 T 28-03-2018 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 SMART SM00354 1 73 6.1E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 SUPERFAMILY SSF47413 1 57 5.06E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 Gene3D G3DSA:3.40.50.2300 56 174 5.1E-19 T 28-03-2018 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS05285 cb57c3dc0421f7c33b2b23cf356c8eea 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 327 3.1E-62 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.9E-30 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 3.3E-27 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 SMART SM00905 4 114 5.2E-47 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 2.8E-39 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 SUPERFAMILY SSF55620 1 114 1.22E-35 T 28-03-2018 CO704_RS20295 e03cd71294a4a831d0bc92c40c4914b5 122 Gene3D G3DSA:3.30.1130.10 1 122 5.8E-35 T 28-03-2018 CO704_RS11030 40eaf0ad18aa950c9a645e898002289c 187 Pfam PF00196 Bacterial regulatory proteins, luxR family 118 162 9.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS11030 40eaf0ad18aa950c9a645e898002289c 187 SUPERFAMILY SSF46894 111 173 3.23E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS11030 40eaf0ad18aa950c9a645e898002289c 187 Gene3D G3DSA:1.10.1270.10 51 166 3.7E-6 T 28-03-2018 CO704_RS10505 376a03a89d9d2060f3bb15a4fa5a5a62 168 Pfam PF08534 Redoxin 21 163 8.6E-29 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CO704_RS10505 376a03a89d9d2060f3bb15a4fa5a5a62 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.109 T 28-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CO704_RS10505 376a03a89d9d2060f3bb15a4fa5a5a62 168 SUPERFAMILY SSF52833 4 164 1.81E-42 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS10505 376a03a89d9d2060f3bb15a4fa5a5a62 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 28-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CO704_RS10505 376a03a89d9d2060f3bb15a4fa5a5a62 168 Gene3D G3DSA:3.40.30.10 6 168 2.8E-22 T 28-03-2018 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 377 3.7E-159 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 Gene3D G3DSA:2.30.40.10 1 48 1.8E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 Gene3D G3DSA:3.20.20.140 49 376 9.7E-28 T 28-03-2018 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 PIRSF PIRSF038971 1 378 2.7E-153 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 Pfam PF07969 Amidohydrolase family 242 372 1.2E-12 T 28-03-2018 IPR013108 Amidohydrolase 3 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 SUPERFAMILY SSF51556 50 345 2.38E-21 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 SUPERFAMILY SSF51338 1 50 8.13E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22365 cd8fc850534bc856baf90099014ce8c6 378 SUPERFAMILY SSF51338 345 377 8.13E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 SUPERFAMILY SSF54373 295 477 1.18E-65 T 28-03-2018 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 Pfam PF05199 GMC oxidoreductase 393 527 2.2E-42 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 Pfam PF00732 GMC oxidoreductase 3 300 6.5E-101 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 SUPERFAMILY SSF51905 1 293 9.55E-87 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 SUPERFAMILY SSF51905 476 535 9.55E-87 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 2.4E-294 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 PIRSF PIRSF000137 1 540 7.5E-144 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 Gene3D G3DSA:4.10.450.10 38 103 1.5E-24 T 28-03-2018 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 Gene3D G3DSA:3.30.560.10 104 489 1.7E-101 T 28-03-2018 CO704_RS11300 10136cda700c1f77e21749fab5c60507 561 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.681 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 SUPERFAMILY SSF56024 501 682 2.0E-70 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 SUPERFAMILY SSF143724 107 313 1.77E-62 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Gene3D G3DSA:3.30.1840.10 109 307 5.2E-54 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Gene3D G3DSA:3.30.870.10 318 499 1.2E-24 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 SUPERFAMILY SSF140356 3 105 7.19E-33 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.0E-30 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 PIRSF PIRSF015589 1 685 2.2E-246 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Gene3D G3DSA:1.20.58.310 9 108 1.2E-33 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Gene3D G3DSA:3.30.870.10 500 686 1.1E-34 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Pfam PF02503 Polyphosphate kinase middle domain 119 319 2.0E-43 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.58 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 SUPERFAMILY SSF56024 315 497 1.76E-57 T 28-03-2018 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.8E-260 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CO704_RS05155 0422f31fbef393020812ccf644dea35c 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.4E-146 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CO704_RS14675 df080909578c1de0ab0212d3ff5c271e 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 87 6.1E-10 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CO704_RS14675 df080909578c1de0ab0212d3ff5c271e 97 SUPERFAMILY SSF101498 1 88 1.44E-12 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CO704_RS14675 df080909578c1de0ab0212d3ff5c271e 97 Gene3D G3DSA:1.10.287.1160 59 88 5.8E-10 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CO704_RS14675 df080909578c1de0ab0212d3ff5c271e 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 91 7.8E-19 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 SMART SM00840 341 402 4.2E-29 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 SUPERFAMILY SSF47323 316 460 5.23E-43 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 SUPERFAMILY SSF52374 1 313 5.38E-102 T 28-03-2018 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.078 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 Pfam PF09190 DALR domain 341 402 3.3E-25 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 Gene3D G3DSA:3.40.50.620 1 305 2.1E-92 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 Gene3D G3DSA:1.20.120.640 306 394 1.0E-21 T 28-03-2018 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.5E-141 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 9.7E-194 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.1E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.1E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.1E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CO704_RS05605 d6f7fb8b6af1662b3f7845f86c6a983f 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.1E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CO704_RS21115 b7f417dbf623319e9c0f6d741d7b96ae 289 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 33 289 2.1E-91 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 372 5.8E-8 T 28-03-2018 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Pfam PF17203 Single cache domain 3 35 162 1.8E-17 T 28-03-2018 IPR033463 Single cache domain 3 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Gene3D G3DSA:1.10.287.130 313 375 8.0E-14 T 28-03-2018 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SUPERFAMILY SSF55874 392 530 1.23E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Gene3D G3DSA:3.30.450.20 30 167 4.7E-18 T 28-03-2018 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SMART SM00387 418 529 1.6E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SUPERFAMILY SSF103190 34 165 6.28E-32 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Gene3D G3DSA:3.30.565.10 381 536 1.2E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 526 7.4E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SUPERFAMILY SSF55890 322 371 6.28E-7 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SUPERFAMILY SSF55785 210 263 3.62E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 Gene3D G3DSA:3.30.450.20 209 312 1.6E-6 T 28-03-2018 CO704_RS20535 85968d4c18b80aa36ca1c2bec862a19b 538 SMART SM00091 210 278 0.0013 T 28-03-2018 IPR000014 PAS domain CO704_RS15425 be5817448efb135e73cf35c8b53490f5 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 3.2E-179 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CO704_RS15425 be5817448efb135e73cf35c8b53490f5 422 Pfam PF04403 Paraquat-inducible protein A 49 200 1.1E-40 T 28-03-2018 IPR007498 Paraquat-inducible protein A CO704_RS15425 be5817448efb135e73cf35c8b53490f5 422 Pfam PF04403 Paraquat-inducible protein A 253 409 1.1E-54 T 28-03-2018 IPR007498 Paraquat-inducible protein A CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 SUPERFAMILY SSF51735 3 167 3.63E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 SUPERFAMILY SSF56327 173 443 2.25E-74 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.1E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 Gene3D G3DSA:3.40.50.720 2 169 4.0E-26 T 28-03-2018 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 6.9E-75 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 4.8E-34 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CO704_RS14930 b196b35bdf250bcb9407287e60d79614 447 Gene3D G3DSA:3.90.110.10 171 447 1.9E-68 T 28-03-2018 CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 SUPERFAMILY SSF53850 15 252 1.61E-66 T 28-03-2018 CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 Gene3D G3DSA:3.40.190.10 22 173 1.9E-39 T 28-03-2018 CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 Gene3D G3DSA:3.40.190.10 174 255 1.1E-11 T 28-03-2018 CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 SMART SM00062 29 252 5.0E-65 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 SMART SM00079 29 251 5.9E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS24805 9a714a52f1bd659260eb8ee927cf795b 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 250 2.6E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS19830 a3ad66bb2650c78345d488b1e8073723 77 Gene3D G3DSA:2.30.30.100 23 75 2.9E-26 T 28-03-2018 CO704_RS19830 a3ad66bb2650c78345d488b1e8073723 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 4.0E-20 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CO704_RS19830 a3ad66bb2650c78345d488b1e8073723 77 SUPERFAMILY SSF50182 23 75 1.25E-15 T 28-03-2018 IPR010920 LSM domain CO704_RS06955 0c2a2778d4738b3ca0dfaaf0d0353b06 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 212 2.6E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06955 0c2a2778d4738b3ca0dfaaf0d0353b06 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 105 8.9E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS06955 0c2a2778d4738b3ca0dfaaf0d0353b06 218 Gene3D G3DSA:1.10.3720.10 2 218 2.3E-36 T 28-03-2018 CO704_RS06955 0c2a2778d4738b3ca0dfaaf0d0353b06 218 SUPERFAMILY SSF161098 13 204 3.4E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Pfam PF17392 Urocanase C-terminal domain 353 547 1.7E-92 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Pfam PF01175 Urocanase Rossmann-like domain 142 350 1.2E-87 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 SUPERFAMILY SSF111326 8 556 3.4E-264 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Gene3D G3DSA:3.40.1770.10 11 153 2.7E-30 T 28-03-2018 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Gene3D G3DSA:3.40.1770.10 197 556 4.3E-166 T 28-03-2018 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Hamap MF_00577 Urocanate hydratase [hutU]. 1 557 50.656 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 Pfam PF17391 Urocanase N-terminal domain 13 139 6.9E-62 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 0.0 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09395 b3d8c725e516f5009ec249b4d42fc494 558 PIRSF PIRSF001423 2 558 5.2E-294 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS23715 5fa0dba2759451b88b51898cba816d96 143 Pfam PF00581 Rhodanese-like domain 43 133 8.3E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS23715 5fa0dba2759451b88b51898cba816d96 143 SUPERFAMILY SSF52821 16 142 2.88E-31 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS23715 5fa0dba2759451b88b51898cba816d96 143 Gene3D G3DSA:3.40.250.10 27 143 5.9E-26 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS23715 5fa0dba2759451b88b51898cba816d96 143 SMART SM00450 40 138 1.1E-20 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 Pfam PF13533 Biotin-lipoyl like 66 98 7.9E-6 T 28-03-2018 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 ProSitePatterns PS00543 HlyD family secretion proteins signature. 356 378 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 SUPERFAMILY SSF111369 65 123 1.11E-5 T 28-03-2018 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 Gene3D G3DSA:1.20.1600.10 77 340 1.3E-15 T 28-03-2018 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 391 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 253 274 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 286 310 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 27 50 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 333 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 371 4.7E-39 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 Pfam PF13437 HlyD family secretion protein 241 345 3.2E-15 T 28-03-2018 CO704_RS11855 69c2f3fa0fece7cd44a9d89e1d72ebe7 391 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 186 391 1.8E-63 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CO704_RS02680 d4c89b3ad9da151cdd1f41c625d5bcb5 438 Pfam PF03972 MmgE/PrpD family 58 387 1.2E-63 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 CO704_RS02680 d4c89b3ad9da151cdd1f41c625d5bcb5 438 SUPERFAMILY SSF103378 16 386 1.83E-70 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 CO704_RS02680 d4c89b3ad9da151cdd1f41c625d5bcb5 438 Gene3D G3DSA:1.10.4100.10 1 296 2.0E-61 T 28-03-2018 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 Gene3D G3DSA:1.10.10.10 3 113 2.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 SMART SM00862 35 107 4.8E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 Gene3D G3DSA:1.25.40.10 671 894 0.035 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 Gene3D G3DSA:1.25.40.10 359 670 0.0012 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 SMART SM00382 153 273 8.5E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 SUPERFAMILY SSF52540 130 388 2.36E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 Gene3D G3DSA:3.40.50.300 123 261 2.0E-10 T 28-03-2018 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 Pfam PF00486 Transcriptional regulatory protein, C terminal 38 107 4.4E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11120 438dea30a56d935184e0ab2eb1f7dc95 894 SUPERFAMILY SSF46894 18 107 4.25E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 50 169 3.2E-51 T 28-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 SUPERFAMILY SSF55073 263 414 6.91E-18 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 SMART SM00267 245 412 1.5E-21 T 28-03-2018 IPR000160 GGDEF domain CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 Gene3D G3DSA:3.30.70.270 250 418 9.3E-23 T 28-03-2018 CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 Pfam PF00563 EAL domain 429 661 3.1E-59 T 28-03-2018 IPR001633 EAL domain CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 Gene3D G3DSA:3.20.20.450 419 671 1.3E-80 T 28-03-2018 IPR001633 EAL domain CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 SUPERFAMILY SSF141868 427 670 3.14E-71 T 28-03-2018 IPR001633 EAL domain CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 408 2.4E-11 T 28-03-2018 IPR000160 GGDEF domain CO704_RS24595 72562fea9d357ab7c5971291ac9c73d2 675 SMART SM00052 422 667 2.2E-95 T 28-03-2018 IPR001633 EAL domain CO704_RS22215 cdc31e32e7574579879ff59075044cdc 448 SUPERFAMILY SSF102114 41 426 3.79E-90 T 28-03-2018 CO704_RS22215 cdc31e32e7574579879ff59075044cdc 448 Gene3D G3DSA:3.20.20.70 33 349 8.7E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS22215 cdc31e32e7574579879ff59075044cdc 448 SMART SM00729 55 277 1.3E-53 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS22215 cdc31e32e7574579879ff59075044cdc 448 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 17 430 3.2E-172 T 28-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW CO704_RS22215 cdc31e32e7574579879ff59075044cdc 448 Pfam PF04055 Radical SAM superfamily 61 224 8.7E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS14830 e9f56c76ee61a014f602bfff5d449501 137 Pfam PF07012 Curlin associated repeat 72 105 1.7E-4 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CO704_RS17245 33f0e6c8d4f49bb160852d2ec9335421 370 Pfam PF01098 Cell cycle protein 22 364 9.2E-125 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CO704_RS17245 33f0e6c8d4f49bb160852d2ec9335421 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CO704_RS17245 33f0e6c8d4f49bb160852d2ec9335421 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 5.0E-137 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Gene3D G3DSA:3.30.450.20 156 271 2.2E-17 T 28-03-2018 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 9.9E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 9.9E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 9.9E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 9.9E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Pfam PF02743 Cache domain 68 254 7.5E-24 T 28-03-2018 IPR033479 Double Cache domain 1 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 SMART SM00283 347 594 7.6E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Gene3D G3DSA:3.30.450.20 27 155 3.8E-21 T 28-03-2018 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Gene3D G3DSA:1.10.287.950 395 595 1.9E-45 T 28-03-2018 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 SUPERFAMILY SSF58104 314 595 1.7E-67 T 28-03-2018 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 561 8.7E-50 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Gene3D G3DSA:1.10.287.950 287 394 1.2E-10 T 28-03-2018 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 Pfam PF00672 HAMP domain 294 341 2.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS09710 1013999fe42167278f57bf55810c5261 595 SUPERFAMILY SSF103190 107 177 1.02E-10 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CO704_RS09710 1013999fe42167278f57bf55810c5261 595 SMART SM00304 292 346 1.4E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS08800 61da7b1f2788bfe7be43e11c2f4af925 379 Gene3D G3DSA:3.90.1150.10 279 379 3.5E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS08800 61da7b1f2788bfe7be43e11c2f4af925 379 Pfam PF00155 Aminotransferase class I and II 49 372 4.4E-30 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS08800 61da7b1f2788bfe7be43e11c2f4af925 379 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 376 8.2E-132 T 28-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CO704_RS08800 61da7b1f2788bfe7be43e11c2f4af925 379 SUPERFAMILY SSF53383 1 377 1.81E-87 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS08800 61da7b1f2788bfe7be43e11c2f4af925 379 Gene3D G3DSA:3.40.640.10 60 278 2.5E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS01440 e08e4d63f3bf3a635d718b481a8d4bd9 328 Pfam PF04085 rod shape-determining protein MreC 123 269 1.0E-36 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CO704_RS01440 e08e4d63f3bf3a635d718b481a8d4bd9 328 PIRSF PIRSF038471 2 284 1.5E-73 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CO704_RS01440 e08e4d63f3bf3a635d718b481a8d4bd9 328 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 6.6E-123 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 Gene3D G3DSA:3.30.420.40 119 307 3.1E-38 T 28-03-2018 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 Gene3D G3DSA:3.30.420.40 4 118 3.3E-15 T 28-03-2018 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 SUPERFAMILY SSF53067 8 299 8.1E-44 T 28-03-2018 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 Pfam PF00480 ROK family 9 298 1.2E-78 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 Hamap MF_00988 D-allose kinase [alsK]. 1 301 65.901 T 28-03-2018 IPR030883 D-allose kinase GO:0019200|GO:0019316 KEGG: 00051+2.7.1.55 CO704_RS22420 af4ff61b689528ad880799a3eb65d502 314 ProSitePatterns PS01125 ROK family signature. 139 166 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS24115 740e5fcbb53b46363da55ed301bd560f 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.099 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CO704_RS24115 740e5fcbb53b46363da55ed301bd560f 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.8E-60 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CO704_RS24115 740e5fcbb53b46363da55ed301bd560f 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 8.0E-39 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CO704_RS24115 740e5fcbb53b46363da55ed301bd560f 156 SUPERFAMILY SSF81573 63 121 2.22E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CO704_RS24115 740e5fcbb53b46363da55ed301bd560f 156 Gene3D G3DSA:1.20.5.620 62 122 2.5E-16 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CO704_RS08235 1bb08ce612e22448ce1451384f286068 142 Gene3D G3DSA:3.30.1330.40 8 137 4.9E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS08235 1bb08ce612e22448ce1451384f286068 142 SUPERFAMILY SSF55298 23 136 2.04E-31 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS08235 1bb08ce612e22448ce1451384f286068 142 Pfam PF01042 Endoribonuclease L-PSP 25 133 3.3E-22 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 SUPERFAMILY SSF46785 1 70 2.03E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 Gene3D G3DSA:3.40.640.10 128 369 1.8E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 SMART SM00345 7 66 5.0E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 Gene3D G3DSA:3.90.1150.10 370 469 1.4E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 Pfam PF00155 Aminotransferase class I and II 106 448 4.5E-39 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 Gene3D G3DSA:1.10.10.10 1 68 4.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00265 f5bd1cb29852f399c8d502c8e47fb998 469 SUPERFAMILY SSF53383 81 465 8.78E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 Gene3D G3DSA:3.90.180.10 1 144 1.6E-41 T 28-03-2018 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 Pfam PF00107 Zinc-binding dehydrogenase 172 298 2.5E-28 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.6E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 SUPERFAMILY SSF51735 137 302 5.09E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 Gene3D G3DSA:3.40.50.720 145 327 2.2E-34 T 28-03-2018 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 SMART SM00829 7 332 8.6E-8 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CO704_RS03565 c174950a99ac5a7282fe9ed8abc93d08 338 SUPERFAMILY SSF50129 1 167 1.67E-44 T 28-03-2018 IPR011032 GroES-like CO704_RS14245 ad378788787fc4a39c2079a2aaa89e8e 181 SUPERFAMILY SSF52499 5 169 4.71E-45 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS14245 ad378788787fc4a39c2079a2aaa89e8e 181 Pfam PF00857 Isochorismatase family 7 148 4.7E-38 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS14245 ad378788787fc4a39c2079a2aaa89e8e 181 Gene3D G3DSA:3.40.50.850 1 176 9.5E-40 T 28-03-2018 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 2.3E-141 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 4.7E-209 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 SUPERFAMILY SSF53383 5 381 1.53E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 PIRSF PIRSF001434 1 384 3.1E-132 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 Gene3D G3DSA:3.40.640.10 1 247 1.7E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS23560 5a09aaeca1314c913b4cfbc4e52c2203 386 Gene3D G3DSA:3.90.1150.10 248 386 6.3E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 528 3.6E-27 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 Gene3D G3DSA:2.70.150.10 13 234 8.6E-30 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 Gene3D G3DSA:3.40.50.1000 290 574 6.1E-38 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 594 2.4E-64 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 SUPERFAMILY SSF56784 380 619 1.84E-40 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 SUPERFAMILY SSF56784 324 343 1.84E-40 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 SUPERFAMILY SSF81665 234 319 1.57E-10 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 SUPERFAMILY SSF81665 85 136 1.57E-10 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 Pfam PF00122 E1-E2 ATPase 133 305 1.1E-47 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 327 333 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 SUPERFAMILY SSF81653 141 233 1.01E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 83 622 5.3E-159 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 83 624 1.5E-146 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 1.9E-16 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 325 339 1.9E-16 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 183 197 1.9E-16 T 28-03-2018 CO704_RS06245 71110d9a14601c52c00d73f94b6e4011 633 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 552 1.9E-16 T 28-03-2018 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.823 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Gene3D G3DSA:1.10.287.180 3 75 1.3E-29 T 28-03-2018 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.8E-84 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 SUPERFAMILY SSF46557 3 78 5.89E-28 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 3.9E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 PIRSF PIRSF006092 1 157 4.2E-47 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.4E-27 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Gene3D G3DSA:3.10.50.30 76 159 6.7E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 SUPERFAMILY SSF54534 80 155 6.8E-21 T 28-03-2018 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CO704_RS00750 1b78897b7c6aa9b1cfed8c875818b2d8 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.436 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CO704_RS13745 2a8bd19cc24a699b55d71806684a74e9 271 Gene3D G3DSA:3.40.50.1980 17 124 2.1E-24 T 28-03-2018 CO704_RS13745 2a8bd19cc24a699b55d71806684a74e9 271 Pfam PF01497 Periplasmic binding protein 21 245 1.2E-29 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS13745 2a8bd19cc24a699b55d71806684a74e9 271 Gene3D G3DSA:3.40.50.1980 125 269 4.5E-25 T 28-03-2018 CO704_RS13745 2a8bd19cc24a699b55d71806684a74e9 271 SUPERFAMILY SSF53807 18 265 1.61E-48 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 SUPERFAMILY SSF51230 105 196 2.09E-23 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:3.30.559.10 382 626 1.2E-79 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:2.40.50.100 246 319 1.3E-9 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 395 625 6.4E-80 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Pfam PF00364 Biotin-requiring enzyme 4 73 4.8E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Pfam PF00364 Biotin-requiring enzyme 106 176 8.6E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Pfam PF00364 Biotin-requiring enzyme 204 274 3.8E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 SUPERFAMILY SSF51230 1 93 4.71E-23 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 SUPERFAMILY SSF52777 384 625 5.34E-81 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:4.10.320.10 320 376 1.5E-20 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 SUPERFAMILY SSF47005 317 362 2.09E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:3.90.1170.30 44 146 6.8E-23 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:3.90.1170.30 147 245 1.9E-22 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Gene3D G3DSA:3.90.1170.30 1 43 3.1E-9 T 28-03-2018 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 Pfam PF02817 e3 binding domain 323 358 2.1E-15 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 SUPERFAMILY SSF51230 204 295 7.07E-24 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS19520 2660f43612e5e5ffbd5fb2845f24a40e 626 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 186 626 1.0E-229 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 338 415 5.5E-20 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 Gene3D G3DSA:2.60.98.20 146 298 9.8E-28 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 Pfam PF00460 Flagella basal body rod protein 4 33 1.2E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 Pfam PF07559 Flagellar basal body protein FlaE 172 297 5.7E-19 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 398 2.3E-95 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS14650 41e3ae7b1cbcae3849822840a4b3ef16 416 SUPERFAMILY SSF117143 73 377 5.62E-81 T 28-03-2018 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Gene3D G3DSA:1.10.275.10 2 138 9.3E-59 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Pfam PF00206 Lyase 12 342 4.4E-121 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Gene3D G3DSA:1.20.200.10 139 417 1.0E-87 T 28-03-2018 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 2.2E-247 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Gene3D G3DSA:1.10.40.30 418 462 2.3E-26 T 28-03-2018 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 2.5E-5 T 28-03-2018 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 2.5E-5 T 28-03-2018 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.304 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.2E-33 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.2E-33 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.2E-33 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.2E-33 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 SUPERFAMILY SSF48557 5 459 3.14E-158 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CO704_RS13250 c91b3b9092ed5efaec3efd3a44515cb7 465 Pfam PF10415 Fumarase C C-terminus 408 461 4.9E-26 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS11755 6f7d1a4d900eafdacd2d597323f52cd3 348 SUPERFAMILY SSF51679 8 330 1.83E-61 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS11755 6f7d1a4d900eafdacd2d597323f52cd3 348 Gene3D G3DSA:3.20.20.30 10 344 2.4E-60 T 28-03-2018 CO704_RS11755 6f7d1a4d900eafdacd2d597323f52cd3 348 TIGRFAM TIGR04027 LLM_KPN_01858: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 4 329 1.7E-165 T 28-03-2018 IPR024003 Putative luciferase-like monooxygenase, KPN01858 CO704_RS11755 6f7d1a4d900eafdacd2d597323f52cd3 348 Pfam PF00296 Luciferase-like monooxygenase 17 287 3.9E-36 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS08985 8cd9a42e3184e43d71d157fbd3c9378a 124 Gene3D G3DSA:2.60.40.1220 26 124 4.6E-31 T 28-03-2018 CO704_RS08985 8cd9a42e3184e43d71d157fbd3c9378a 124 Pfam PF04234 CopC domain 27 123 1.7E-25 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CO704_RS08985 8cd9a42e3184e43d71d157fbd3c9378a 124 SUPERFAMILY SSF81296 26 124 6.65E-27 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS16015 f539fc91faee530d6eb37ee3d47907fb 322 Gene3D G3DSA:3.60.20.30 155 293 3.9E-39 T 28-03-2018 CO704_RS16015 f539fc91faee530d6eb37ee3d47907fb 322 SUPERFAMILY SSF56235 10 290 7.72E-78 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS16015 f539fc91faee530d6eb37ee3d47907fb 322 Pfam PF01112 Asparaginase 22 289 1.3E-67 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 7.8E-79 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Gene3D G3DSA:3.30.2300.10 83 162 4.5E-21 T 28-03-2018 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 SUPERFAMILY SSF52821 401 481 3.98E-9 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 373 1.8E-138 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Gene3D G3DSA:3.30.70.1510 2 82 4.0E-21 T 28-03-2018 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 SUPERFAMILY SSF52402 174 372 4.41E-41 T 28-03-2018 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Gene3D G3DSA:3.40.50.620 175 399 5.2E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 SUPERFAMILY SSF143437 1 173 8.72E-51 T 28-03-2018 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 228.054 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Gene3D G3DSA:3.40.250.10 400 481 7.5E-10 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 4.7E-39 T 28-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 SMART SM00981 75 165 5.7E-26 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CO704_RS18270 d5654dc9bdab28f539dd3de790659880 482 Pfam PF02926 THUMP domain 28 161 8.2E-28 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Gene3D G3DSA:3.40.50.300 291 551 3.0E-56 T 28-03-2018 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Gene3D G3DSA:3.40.50.300 7 98 4.2E-9 T 28-03-2018 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 SUPERFAMILY SSF52540 311 501 4.93E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Gene3D G3DSA:3.40.50.300 99 290 9.3E-45 T 28-03-2018 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Pfam PF00005 ABC transporter 336 469 1.4E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Pfam PF00005 ABC transporter 19 185 2.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Pfam PF12848 ABC transporter 224 294 2.3E-10 T 28-03-2018 IPR032781 ABC-transporter extension domain CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 1.3E-20 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 SMART SM00382 28 230 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 SMART SM00382 344 514 2.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15430 34ec7845d1f6ef36e987b27d5196d621 635 SUPERFAMILY SSF52540 9 238 1.17E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 Pfam PF00771 FHIPEP family 31 680 1.0E-268 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 8.0E-282 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PIRSF PIRSF005419 11 692 1.7E-244 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS08780 bc1daece109c2e51608585e142d9c05c 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 28-03-2018 IPR025505 FHIPEP conserved site CO704_RS03145 0b88fccc76a8ae4a022798ec9699358b 212 Gene3D G3DSA:3.40.50.620 35 198 9.1E-6 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS03145 0b88fccc76a8ae4a022798ec9699358b 212 Pfam PF02677 Uncharacterized BCR, COG1636 20 194 1.3E-63 T 28-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 33 53 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 191 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 219 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 14 33 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 149 169 2.6E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 197 209 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 Pfam PF00813 FliP family 16 216 1.4E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS16115 79a6ba9008a1365e750b816c0b17374d 221 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 13 216 1.1E-82 T 28-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 CO704_RS00490 0d589611050072d05d885c818cedf58f 195 SUPERFAMILY SSF53335 11 188 2.07E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS00490 0d589611050072d05d885c818cedf58f 195 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 189 6.0E-73 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CO704_RS00490 0d589611050072d05d885c818cedf58f 195 Pfam PF03602 Conserved hypothetical protein 95 12 187 8.4E-62 T 28-03-2018 CO704_RS00490 0d589611050072d05d885c818cedf58f 195 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS00490 0d589611050072d05d885c818cedf58f 195 PIRSF PIRSF004553 11 191 6.4E-61 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CO704_RS00490 0d589611050072d05d885c818cedf58f 195 Gene3D G3DSA:3.40.50.150 1 195 2.1E-33 T 28-03-2018 CO704_RS16495 5aa68044e8783ecf52df41fa20dec374 426 Pfam PF01095 Pectinesterase 195 337 1.3E-10 T 28-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CO704_RS16495 5aa68044e8783ecf52df41fa20dec374 426 SUPERFAMILY SSF51126 192 371 1.52E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS16495 5aa68044e8783ecf52df41fa20dec374 426 SUPERFAMILY SSF51126 77 157 1.52E-38 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS16495 5aa68044e8783ecf52df41fa20dec374 426 Gene3D G3DSA:2.160.20.10 74 426 8.7E-46 T 28-03-2018 IPR012334 Pectin lyase fold CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 5 262 2.0E-136 T 28-03-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 261 1.6E-64 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 Gene3D G3DSA:3.90.226.10 5 220 1.9E-68 T 28-03-2018 CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 SUPERFAMILY SSF52096 3 261 8.2E-87 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS11790 9a370070bdd14ff30a773556b358044c 262 Gene3D G3DSA:1.10.12.10 221 262 4.0E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.1E-51 T 28-03-2018 CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.4E-64 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 Gene3D G3DSA:3.20.20.70 12 128 5.9E-11 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 PIRSF PIRSF000368 1 154 3.9E-60 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CO704_RS01905 bb89aea779cea447c2bcf26e922dbbef 154 SUPERFAMILY SSF102114 24 98 6.54E-7 T 28-03-2018 CO704_RS10275 3cddc8a2a207fad98d2da4ba9589382b 206 Gene3D G3DSA:3.90.870.10 1 205 1.6E-59 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS10275 3cddc8a2a207fad98d2da4ba9589382b 206 SUPERFAMILY SSF55821 1 204 2.96E-66 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS10275 3cddc8a2a207fad98d2da4ba9589382b 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 7.8E-76 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CO704_RS10275 3cddc8a2a207fad98d2da4ba9589382b 206 Pfam PF01300 Telomere recombination 23 198 7.6E-46 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CO704_RS19775 7c7f62f5a8df39089e9386bb47ce07bc 219 SUPERFAMILY SSF55120 8 216 1.02E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS19775 7c7f62f5a8df39089e9386bb47ce07bc 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 6.5E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS19775 7c7f62f5a8df39089e9386bb47ce07bc 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 218 1.0E-58 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS19775 7c7f62f5a8df39089e9386bb47ce07bc 219 Gene3D G3DSA:3.30.2350.10 14 218 1.2E-60 T 28-03-2018 CO704_RS19775 7c7f62f5a8df39089e9386bb47ce07bc 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 SUPERFAMILY SSF54631 66 201 7.83E-33 T 28-03-2018 CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 SMART SM00116 78 127 4.4 T 28-03-2018 IPR000644 CBS domain CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 SMART SM00116 141 189 0.047 T 28-03-2018 IPR000644 CBS domain CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 Gene3D G3DSA:3.10.580.10 50 199 1.2E-35 T 28-03-2018 CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 SUPERFAMILY SSF56176 203 289 1.91E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 SMART SM01091 205 283 2.5E-31 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 Pfam PF03471 Transporter associated domain 206 281 6.5E-23 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 Gene3D G3DSA:3.30.465.10 200 281 2.9E-28 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 Pfam PF00571 CBS domain 140 189 1.6E-5 T 28-03-2018 IPR000644 CBS domain CO704_RS17175 fc78182cbf5c831ed021f516b9e339b4 292 Pfam PF00571 CBS domain 69 124 9.5E-8 T 28-03-2018 IPR000644 CBS domain CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 Gene3D G3DSA:1.10.10.10 1 74 2.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 Pfam PF07729 FCD domain 96 219 9.3E-18 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 SUPERFAMILY SSF46785 2 76 7.58E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 SMART SM00895 96 220 2.8E-16 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 2.4E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 SUPERFAMILY SSF48008 94 228 7.59E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.2E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.2E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 Gene3D G3DSA:1.20.120.530 94 232 4.5E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS20670 5d6540b72a5e0275a24486e87d38237d 258 SMART SM00345 13 72 6.5E-26 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17550 04d82a89c31d0b39e02a26890c17961e 275 SUPERFAMILY SSF101801 196 258 7.98E-8 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS17550 04d82a89c31d0b39e02a26890c17961e 275 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 258 3.1E-8 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS17550 04d82a89c31d0b39e02a26890c17961e 275 Gene3D G3DSA:2.30.330.10 184 261 1.1E-10 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 SUPERFAMILY SSF101386 2 105 3.11E-26 T 28-03-2018 CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 228 2.4E-6 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 1.5E-27 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 Gene3D G3DSA:1.10.287.1080 122 222 2.5E-26 T 28-03-2018 CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 Gene3D G3DSA:1.10.287.1080 3 121 1.5E-40 T 28-03-2018 CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 SUPERFAMILY SSF101386 136 237 2.8E-22 T 28-03-2018 CO704_RS03550 90a03ff0180b338e8502d2a21b61a018 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 2.4E-114 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CO704_RS08895 2b8bfe233e3c753756281cac72be097e 239 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 56 216 34.402 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS08895 2b8bfe233e3c753756281cac72be097e 239 Gene3D G3DSA:3.30.1060.10 43 225 6.4E-60 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS08895 2b8bfe233e3c753756281cac72be097e 239 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 57 207 7.7E-51 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS08895 2b8bfe233e3c753756281cac72be097e 239 Pfam PF01625 Peptide methionine sulfoxide reductase 58 210 2.4E-54 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS08895 2b8bfe233e3c753756281cac72be097e 239 SUPERFAMILY SSF55068 50 222 3.27E-64 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 Gene3D G3DSA:2.40.37.10 423 604 1.6E-62 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 Gene3D G3DSA:2.40.37.10 22 114 1.6E-13 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PIRSF PIRSF001336 15 658 4.7E-255 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 SUPERFAMILY SSF50621 482 584 9.77E-8 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 SUPERFAMILY SSF51419 92 369 4.67E-67 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 2.1E-71 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.5E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 656 3.0E-276 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 6.2E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 6.2E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 6.2E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 6.2E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 6.2E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.157 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CO704_RS02850 7b365e80fdcaf991929c53ab9fdcb0e5 658 Gene3D G3DSA:3.20.20.10 115 369 7.2E-33 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 Pfam PF03466 LysR substrate binding domain 86 277 5.1E-23 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 Gene3D G3DSA:3.40.190.10 86 182 3.3E-14 T 28-03-2018 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 SUPERFAMILY SSF53850 86 279 6.88E-21 T 28-03-2018 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 Gene3D G3DSA:3.40.190.10 183 261 3.5E-4 T 28-03-2018 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 9.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 SUPERFAMILY SSF46785 1 84 1.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11110 48510a6cd37ff06e7246c02aefd61c58 282 Gene3D G3DSA:1.10.10.10 1 83 4.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 250 2.5E-53 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 SMART SM00062 24 253 8.1E-59 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 SUPERFAMILY SSF53850 1 251 5.64E-61 T 28-03-2018 CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 Gene3D G3DSA:3.40.190.10 138 255 1.0E-11 T 28-03-2018 CO704_RS13140 f7e930cdb101a11beeb5beefc862d932 258 Gene3D G3DSA:3.40.190.10 18 137 4.9E-34 T 28-03-2018 CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 443 6.6E-168 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 1.8E-96 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 Gene3D G3DSA:2.60.120.560 369 463 1.1E-10 T 28-03-2018 CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 SUPERFAMILY SSF75005 22 337 1.88E-102 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 Gene3D G3DSA:2.115.10.20 36 368 1.6E-92 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 411 454 8.2E-9 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 SUPERFAMILY SSF49899 338 467 1.03E-21 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CO704_RS11230 b9e3afd74b06a5ddfc7765ce8ab0d82e 469 SMART SM00640 31 432 2.4E-132 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 PIRSF PIRSF000727 12 810 2.5E-292 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Pfam PF00696 Amino acid kinase family 12 284 7.8E-42 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 SUPERFAMILY SSF51735 457 630 1.58E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 3.0E-24 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Pfam PF00742 Homoserine dehydrogenase 608 803 4.9E-43 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Gene3D G3DSA:3.40.50.720 455 629 9.1E-25 T 28-03-2018 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 SUPERFAMILY SSF53633 12 299 4.32E-57 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 3.4E-63 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 SUPERFAMILY SSF55347 608 791 3.86E-46 T 28-03-2018 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Gene3D G3DSA:3.30.360.10 630 787 1.1E-49 T 28-03-2018 CO704_RS23555 d1e38962fe7fe5b8f4bcd24b9276f1eb 810 Gene3D G3DSA:3.40.1160.10 11 319 3.2E-49 T 28-03-2018 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 PIRSF PIRSF002191 1 115 1.2E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 SUPERFAMILY SSF50104 2 114 1.91E-47 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.32 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.4E-52 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 Pfam PF01245 Ribosomal protein L19 3 113 1.3E-49 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04410 9a5f113685e9c53a6d9669622c3f9113 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 SUPERFAMILY SSF50610 534 609 1.57E-19 T 28-03-2018 IPR009004 Transposase, Mu, C-terminal CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Gene3D G3DSA:1.10.10.10 1 68 5.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Gene3D G3DSA:2.30.30.130 542 607 1.2E-15 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 SUPERFAMILY SSF53098 311 525 3.04E-46 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Gene3D G3DSA:1.10.10.60 108 206 9.5E-5 T 28-03-2018 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Pfam PF09299 Mu transposase, C-terminal 547 604 5.3E-12 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 SUPERFAMILY SSF46955 2 70 1.01E-12 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Gene3D G3DSA:1.10.10.60 228 293 1.0E-7 T 28-03-2018 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Pfam PF00665 Integrase core domain 315 435 5.9E-13 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Gene3D G3DSA:3.30.420.10 300 540 5.3E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS16790 f974b3e7c23c87f27f6ab594fdc74eb0 692 Pfam PF02316 Mu DNA-binding domain 7 83 3.6E-7 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Pfam PF13328 HD domain 26 175 9.4E-54 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SMART SM00954 235 345 2.2E-62 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 703 1.6E-291 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SUPERFAMILY SSF55021 633 703 4.58E-6 T 28-03-2018 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Gene3D G3DSA:3.30.70.260 627 705 1.3E-10 T 28-03-2018 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Gene3D G3DSA:3.30.460.10 192 325 5.5E-40 T 28-03-2018 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SUPERFAMILY SSF81301 180 392 4.09E-62 T 28-03-2018 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Gene3D G3DSA:3.10.20.30 382 457 8.3E-23 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 6.9E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SMART SM00471 41 153 4.1E-12 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SUPERFAMILY SSF109604 3 190 2.2E-75 T 28-03-2018 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 SUPERFAMILY SSF81271 375 447 1.35E-20 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Pfam PF13291 ACT domain 626 703 3.2E-15 T 28-03-2018 IPR002912 ACT domain CO704_RS23875 65b66a25dcc4da70061728c3b9bd23d9 706 Pfam PF02824 TGS domain 388 447 2.7E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 PIRSF PIRSF000538 1 487 2.6E-140 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.8E-175 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 SUPERFAMILY SSF53067 2 246 2.18E-80 T 28-03-2018 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 Gene3D G3DSA:3.30.420.40 241 487 8.2E-54 T 28-03-2018 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 437 1.6E-30 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 Gene3D G3DSA:3.30.420.40 1 240 4.4E-81 T 28-03-2018 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 SUPERFAMILY SSF53067 245 481 8.95E-52 T 28-03-2018 CO704_RS06420 f505c3f13d075f0180b70f0872a82c45 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 1.8E-80 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Gene3D G3DSA:3.40.50.300 183 359 8.1E-25 T 28-03-2018 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Gene3D G3DSA:1.10.10.60 433 509 4.9E-10 T 28-03-2018 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Gene3D G3DSA:1.10.8.60 360 432 3.9E-18 T 28-03-2018 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 SUPERFAMILY SSF52540 186 422 2.24E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 SUPERFAMILY SSF55781 23 169 4.14E-16 T 28-03-2018 IPR029016 GAF domain-like CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Pfam PF00158 Sigma-54 interaction domain 187 353 2.0E-66 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 SMART SM00382 207 354 1.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 SUPERFAMILY SSF46689 451 505 1.08E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Pfam PF01590 GAF domain 24 154 5.2E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 Gene3D G3DSA:3.30.450.40 4 173 6.7E-18 T 28-03-2018 IPR029016 GAF domain-like CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 SMART SM00065 20 167 2.6E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS05245 fd3b3d38ca2e8b4cf2f2703df1239741 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS06625 30db0100871fbe330e73b504dc06a7f8 98 Pfam PF05957 Bacterial protein of unknown function (DUF883) 7 98 5.8E-29 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CO704_RS03465 aa6e66e721aaf4048801dfd5ce67fbd1 366 PIRSF PIRSF028774 1 360 9.5E-190 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CO704_RS03465 aa6e66e721aaf4048801dfd5ce67fbd1 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.959 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CO704_RS03465 aa6e66e721aaf4048801dfd5ce67fbd1 366 SUPERFAMILY SSF53335 184 293 1.52E-11 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS03465 aa6e66e721aaf4048801dfd5ce67fbd1 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 1.1E-7 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CO704_RS03465 aa6e66e721aaf4048801dfd5ce67fbd1 366 Gene3D G3DSA:3.40.50.150 176 357 3.4E-19 T 28-03-2018 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 Gene3D G3DSA:3.40.640.10 61 241 6.1E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 Gene3D G3DSA:3.90.1150.10 2 60 3.7E-4 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 350 2.1E-123 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 Gene3D G3DSA:3.90.1150.10 242 351 3.9E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 Pfam PF00155 Aminotransferase class I and II 43 348 1.2E-64 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 54.005 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CO704_RS07690 0d2489d36e2758cd1296ee3787456f91 360 SUPERFAMILY SSF53383 8 350 1.29E-82 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 SUPERFAMILY SSF51735 5 244 7.66E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 3.5E-60 T 28-03-2018 CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 Gene3D G3DSA:3.40.50.720 38 245 2.2E-54 T 28-03-2018 CO704_RS11175 52cb9a9a290aa045ee97ef008d387d4f 245 Gene3D G3DSA:3.40.50.720 1 37 1.8E-9 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.50.50.60 572 644 1.1E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.50.50.60 485 571 2.3E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.50.50.60 408 484 7.2E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 318 631 2.6E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.30.70.20 1 21 0.025 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.30.70.20 90 131 7.2E-14 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:1.10.1060.10 164 314 4.9E-34 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Pfam PF13247 4Fe-4S dicluster domain 54 143 1.3E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.30.70.20 22 59 5.1E-8 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 178 641 7.1E-234 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 SUPERFAMILY SSF51971 317 571 5.89E-64 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.40.50.720 315 407 1.3E-16 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 PRINTS PR00419 Adrenodoxin reductase family signature 318 340 1.0E-35 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 PRINTS PR00419 Adrenodoxin reductase family signature 383 393 1.0E-35 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 PRINTS PR00419 Adrenodoxin reductase family signature 460 474 1.0E-35 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 PRINTS PR00419 Adrenodoxin reductase family signature 494 507 1.0E-35 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 PRINTS PR00419 Adrenodoxin reductase family signature 341 354 1.0E-35 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.30.70.20 132 157 0.25 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 193 304 1.0E-36 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 Gene3D G3DSA:3.30.70.20 60 89 1.1E-10 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 SUPERFAMILY SSF54862 186 280 3.49E-41 T 28-03-2018 CO704_RS10965 d43c33eda5d03544202d7e86714648d0 646 SUPERFAMILY SSF54862 1 159 3.49E-41 T 28-03-2018 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 SUPERFAMILY SSF53901 4 276 3.27E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 Pfam PF00108 Thiolase, N-terminal domain 5 268 5.2E-75 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 8.3E-220 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.7E-136 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 Gene3D G3DSA:3.40.47.10 276 398 4.2E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 PIRSF PIRSF000429 1 402 2.6E-132 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 SUPERFAMILY SSF53901 278 400 1.44E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 Gene3D G3DSA:3.40.47.10 1 146 1.5E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 Gene3D G3DSA:3.40.47.10 159 275 4.7E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CO704_RS11775 34ef21609bcb1d895e1237cef5a97296 402 Pfam PF02803 Thiolase, C-terminal domain 278 400 1.3E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 Pfam PF00005 ABC transporter 27 175 2.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 Gene3D G3DSA:3.40.50.300 4 242 1.5E-65 T 28-03-2018 CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 SMART SM00382 36 223 2.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 SUPERFAMILY SSF52540 9 229 5.7E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 Pfam PF12704 MacB-like periplasmic core domain 273 489 1.1E-27 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00080 cad34ad5977cfd86ee30f179cb9e656a 646 Pfam PF02687 FtsX-like permease family 552 639 1.1E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 576 2.3E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 2.1E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 SMART SM00382 41 246 5.0E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 SMART SM00382 350 550 4.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Gene3D G3DSA:3.40.50.300 311 598 3.0E-73 T 28-03-2018 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Gene3D G3DSA:3.40.50.300 9 307 2.9E-69 T 28-03-2018 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 SUPERFAMILY SSF52540 13 268 3.36E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 SUPERFAMILY SSF52540 315 564 9.99E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Pfam PF00005 ABC transporter 342 491 7.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 Pfam PF00005 ABC transporter 33 196 8.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS07135 dccee4d54d0fb070467ec4377c99cbd3 624 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 SUPERFAMILY SSF52343 104 248 4.32E-38 T 28-03-2018 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 SUPERFAMILY SSF63380 3 100 1.56E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 4.6E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 Gene3D G3DSA:3.40.50.80 97 248 1.7E-24 T 28-03-2018 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 Gene3D G3DSA:2.40.30.10 1 95 2.3E-18 T 28-03-2018 CO704_RS23635 f14429f4dea8c9627f81ffe27b456737 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.0E-16 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 SUPERFAMILY SSF52922 491 619 6.67E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 SMART SM00861 319 484 1.1E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.8E-116 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Gene3D G3DSA:3.40.50.970 298 485 9.4E-62 T 28-03-2018 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 SUPERFAMILY SSF52518 317 504 9.2E-56 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 7.7E-27 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.258 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Gene3D G3DSA:3.40.50.970 3 297 2.6E-73 T 28-03-2018 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Gene3D G3DSA:3.40.50.920 495 620 2.4E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 SUPERFAMILY SSF52518 10 199 1.12E-74 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 SUPERFAMILY SSF52518 243 381 1.12E-74 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS18285 e53b1b501d22c4d3faed5da38eeee445 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.9E-37 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 Gene3D G3DSA:1.20.1300.10 1 119 1.4E-31 T 28-03-2018 CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 PIRSF PIRSF000179 1 119 6.4E-53 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.306 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 SUPERFAMILY SSF81343 2 119 7.19E-52 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 Pfam PF02313 Fumarate reductase subunit D 6 116 1.6E-50 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CO704_RS21335 6882335242d5519f400da806b4e8cd87 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 106 6.0E-49 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 Gene3D G3DSA:3.40.309.10 283 475 8.7E-66 T 28-03-2018 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 SUPERFAMILY SSF53720 12 492 8.38E-163 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 Gene3D G3DSA:3.40.605.10 6 282 1.0E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS07860 448849886a5b2a9ea428529ec22b708d 497 Pfam PF00171 Aldehyde dehydrogenase family 32 489 2.7E-169 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 8 314 6.2E-136 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 340 2.5E-28 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 Hamap MF_00625 Selenide, water dikinase [selD]. 6 348 45.534 T 28-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 51 158 2.5E-18 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 SUPERFAMILY SSF55326 8 162 3.89E-41 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 Gene3D G3DSA:3.90.650.10 165 348 1.0E-42 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 PIRSF PIRSF036407 1 347 9.8E-118 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 Gene3D G3DSA:3.30.1330.10 1 163 2.0E-37 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS14010 6e6037347a033aa1bc14d136cdedfb92 348 SUPERFAMILY SSF56042 165 339 6.28E-49 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS19730 53b53f5e5833aac0a6890ad9ab36bb1d 392 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 390 9.0E-161 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CO704_RS19730 53b53f5e5833aac0a6890ad9ab36bb1d 392 Pfam PF07690 Major Facilitator Superfamily 20 344 3.9E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS19730 53b53f5e5833aac0a6890ad9ab36bb1d 392 Gene3D G3DSA:1.20.1250.20 211 391 4.6E-24 T 28-03-2018 CO704_RS19730 53b53f5e5833aac0a6890ad9ab36bb1d 392 SUPERFAMILY SSF103473 12 389 6.8E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS19730 53b53f5e5833aac0a6890ad9ab36bb1d 392 Gene3D G3DSA:1.20.1250.20 1 210 9.3E-19 T 28-03-2018 CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 Pfam PF00891 O-methyltransferase 125 335 1.2E-49 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 SUPERFAMILY SSF46785 36 112 1.11E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 Pfam PF16864 Dimerisation domain 45 110 1.5E-6 T 28-03-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 Gene3D G3DSA:1.10.10.10 31 110 4.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 Gene3D G3DSA:3.40.50.150 111 356 1.9E-43 T 28-03-2018 CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 SUPERFAMILY SSF53335 114 353 3.94E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS12830 fc6dd70e57b3b70a6bcd3a9d928a7ddf 356 PIRSF PIRSF005739 24 355 7.7E-50 T 28-03-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 2.8E-95 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 3.3E-127 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 Gene3D G3DSA:1.20.1080.10 14 285 3.6E-79 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CO704_RS15610 3fc6764714d39d9bcee053c41a863751 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.5E-76 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 4.6E-144 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 SMART SM00244 18 227 5.2E-45 T 28-03-2018 IPR001107 Band 7 domain CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 PIRSF PIRSF005651 1 334 2.1E-108 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 SUPERFAMILY SSF117892 56 157 1.07E-16 T 28-03-2018 IPR001107 Band 7 domain CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.1E-34 T 28-03-2018 IPR001107 Band 7 domain CO704_RS20955 0d9cc468d9e8ba85ed3df369d8f25ef9 334 SUPERFAMILY SSF117892 195 233 1.05E-7 T 28-03-2018 IPR001107 Band 7 domain CO704_RS15540 3dce133d07dc3b9aee75c52650e91fe6 258 Gene3D G3DSA:3.40.50.620 69 214 4.0E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS15540 3dce133d07dc3b9aee75c52650e91fe6 258 Pfam PF02698 DUF218 domain 81 216 3.6E-25 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CO704_RS25290 90b3bf18b00cfd17ea318efaa6e8b7d7 68 Gene3D G3DSA:1.10.260.40 2 66 4.3E-11 T 28-03-2018 CO704_RS25290 90b3bf18b00cfd17ea318efaa6e8b7d7 68 SUPERFAMILY SSF47413 2 68 1.49E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25290 90b3bf18b00cfd17ea318efaa6e8b7d7 68 SMART SM00530 6 62 6.3E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25290 90b3bf18b00cfd17ea318efaa6e8b7d7 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 3.9E-23 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS11640 a37470a5897c859e96745131a9499e8d 277 Gene3D G3DSA:1.10.3720.10 6 273 2.5E-32 T 28-03-2018 CO704_RS11640 a37470a5897c859e96745131a9499e8d 277 SUPERFAMILY SSF161098 8 271 2.09E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11640 a37470a5897c859e96745131a9499e8d 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 265 9.0E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.8E-133 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.4E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 4.4E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.4E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.4E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.7E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.7E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.7E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.7E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.7E-31 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.212 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 2.5E-54 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 Gene3D G3DSA:3.40.50.1370 146 319 1.3E-53 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 Gene3D G3DSA:3.40.50.1370 1 145 2.9E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.8E-45 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CO704_RS01975 2d8330c623a65469f86a5bbeb204f1ef 334 SUPERFAMILY SSF53671 4 333 2.88E-97 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS24680 e541ee1d2049ee86e88198b5066e1eab 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 3.8E-33 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CO704_RS24680 e541ee1d2049ee86e88198b5066e1eab 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 3.0E-19 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CO704_RS24680 e541ee1d2049ee86e88198b5066e1eab 85 SMART SM01234 8 75 6.7E-45 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CO704_RS24680 e541ee1d2049ee86e88198b5066e1eab 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.282 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CO704_RS24680 e541ee1d2049ee86e88198b5066e1eab 85 Pfam PF01809 Haemolytic domain 10 75 1.6E-30 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.0E-27 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:1.20.1640.10 826 1039 3.5E-35 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82866 293 505 6.8E-40 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:3.30.70.1430 566 664 1.1E-8 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82714 722 806 1.83E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 1.2E-244 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:1.20.1640.10 286 516 6.0E-46 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82693 46 126 4.97E-20 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:3.30.2090.10 183 270 1.7E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82866 805 1039 3.53E-49 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:3.30.70.1430 45 138 2.7E-19 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82693 137 184 1.49E-22 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82693 270 327 1.49E-22 T 28-03-2018 CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 Gene3D G3DSA:3.30.2090.10 722 808 8.5E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS17310 8f6b53c4373746885bd176f2d51b0f95 1039 SUPERFAMILY SSF82714 185 269 9.29E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 Gene3D G3DSA:3.30.390.10 2 127 2.7E-36 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 Pfam PF13378 Enolase C-terminal domain-like 181 371 5.0E-40 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 114 2.9E-26 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 SUPERFAMILY SSF51604 102 380 5.11E-69 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 89 114 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 SUPERFAMILY SSF54826 10 116 1.56E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 SMART SM00922 132 252 9.8E-13 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CO704_RS05275 f12030d066d7b61ea4abecc2926033d1 399 Gene3D G3DSA:3.20.20.120 128 366 1.6E-56 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS13965 353511060fa7e73073b62a037654040c 398 PIRSF PIRSF029172 8 398 2.5E-164 T 28-03-2018 IPR027020 Protein ynjB CO704_RS13965 353511060fa7e73073b62a037654040c 398 Gene3D G3DSA:3.40.190.10 41 396 1.4E-16 T 28-03-2018 CO704_RS13965 353511060fa7e73073b62a037654040c 398 Pfam PF13416 Bacterial extracellular solute-binding protein 66 357 4.6E-19 T 28-03-2018 CO704_RS13965 353511060fa7e73073b62a037654040c 398 SUPERFAMILY SSF53850 40 395 2.07E-32 T 28-03-2018 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 Gene3D G3DSA:3.40.50.300 1 140 7.9E-20 T 28-03-2018 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.8E-101 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 Gene3D G3DSA:1.10.8.60 143 222 2.3E-21 T 28-03-2018 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 2.1E-66 T 28-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.3E-45 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 Gene3D G3DSA:1.20.272.10 223 343 6.7E-27 T 28-03-2018 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 SUPERFAMILY SSF48019 212 335 3.57E-34 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CO704_RS17220 b5675cc04cad72f633602f050ab2ffa3 343 SUPERFAMILY SSF52540 1 210 8.5E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20595 a189bd6dec2cd24ee05a25f5c48d9343 296 Pfam PF01791 DeoC/LacD family aldolase 52 258 1.8E-19 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20595 a189bd6dec2cd24ee05a25f5c48d9343 296 Gene3D G3DSA:3.20.20.70 1 291 1.4E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20595 a189bd6dec2cd24ee05a25f5c48d9343 296 PIRSF PIRSF038992 31 288 3.5E-77 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20595 a189bd6dec2cd24ee05a25f5c48d9343 296 SMART SM01133 51 259 2.8E-30 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20595 a189bd6dec2cd24ee05a25f5c48d9343 296 SUPERFAMILY SSF51569 35 275 1.28E-63 T 28-03-2018 CO704_RS07130 e95b15b6adbc4b7c2ec5c768b2241a07 317 Gene3D G3DSA:3.60.20.30 180 317 9.2E-50 T 28-03-2018 CO704_RS07130 e95b15b6adbc4b7c2ec5c768b2241a07 317 Pfam PF01112 Asparaginase 5 312 1.1E-122 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CO704_RS07130 e95b15b6adbc4b7c2ec5c768b2241a07 317 SUPERFAMILY SSF56235 4 304 1.16E-101 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 SUPERFAMILY SSF48576 1 281 1.69E-87 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 Gene3D G3DSA:1.10.600.10 264 299 2.2E-4 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 Gene3D G3DSA:1.10.600.10 1 263 3.5E-84 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS18280 134929828e68bdd59e2f997779de0da5 299 Pfam PF00348 Polyprenyl synthetase 32 271 3.3E-58 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CO704_RS10370 5b8425a29416c490bb432eab00dd37a6 108 PIRSF PIRSF037511 1 108 7.2E-33 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CO704_RS10370 5b8425a29416c490bb432eab00dd37a6 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 5.1E-38 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CO704_RS10370 5b8425a29416c490bb432eab00dd37a6 108 Pfam PF01253 Translation initiation factor SUI1 32 101 3.1E-17 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CO704_RS10370 5b8425a29416c490bb432eab00dd37a6 108 SUPERFAMILY SSF55159 6 104 2.75E-24 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CO704_RS10370 5b8425a29416c490bb432eab00dd37a6 108 Gene3D G3DSA:3.30.780.10 16 106 3.2E-19 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CO704_RS13600 4d614e3f6228f006890c99b6f2988780 132 Pfam PF01042 Endoribonuclease L-PSP 17 128 2.5E-25 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS13600 4d614e3f6228f006890c99b6f2988780 132 Gene3D G3DSA:3.30.1330.40 3 132 5.7E-34 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS13600 4d614e3f6228f006890c99b6f2988780 132 SUPERFAMILY SSF55298 9 129 1.51E-35 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 SUPERFAMILY SSF50692 674 803 8.36E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 SUPERFAMILY SSF50692 628 647 8.36E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Gene3D G3DSA:3.40.228.10 548 627 3.7E-14 T 28-03-2018 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 28-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 SUPERFAMILY SSF53706 1 638 3.27E-230 T 28-03-2018 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Gene3D G3DSA:2.40.40.20 628 803 9.6E-41 T 28-03-2018 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Gene3D G3DSA:3.40.50.740 268 449 7.3E-27 T 28-03-2018 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Gene3D G3DSA:3.40.228.10 1 267 4.4E-69 T 28-03-2018 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Pfam PF00384 Molybdopterin oxidoreductase 2 379 2.6E-18 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS17875 31873aa5ff80ecb7f00d0a53f115aa9c 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 1.6E-16 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.2E-30 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 PIRSF PIRSF004669 1 89 4.3E-33 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS08385 2442d8df058d46751cd8d974d7c1fca2 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.8E-34 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CO704_RS01880 8d18af66d9c352ea98f2402a37031426 172 SUPERFAMILY SSF52317 1 170 7.92E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS01880 8d18af66d9c352ea98f2402a37031426 172 Pfam PF01965 DJ-1/PfpI family 3 166 1.4E-53 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS01880 8d18af66d9c352ea98f2402a37031426 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 170 5.3E-65 T 28-03-2018 IPR006286 Peptidase C56, PfpI CO704_RS01880 8d18af66d9c352ea98f2402a37031426 172 Gene3D G3DSA:3.40.50.880 1 170 7.0E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS14995 2173900984515d838c53f3401708c9aa 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 2.0E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 SUPERFAMILY SSF46689 14 92 7.48E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 Gene3D G3DSA:1.10.357.10 71 213 2.9E-24 T 28-03-2018 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 SUPERFAMILY SSF48498 88 212 2.61E-39 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS14995 2173900984515d838c53f3401708c9aa 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.5E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.5E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 Gene3D G3DSA:1.10.10.60 2 70 1.2E-18 T 28-03-2018 CO704_RS14995 2173900984515d838c53f3401708c9aa 213 Pfam PF08362 YcdC-like protein, C-terminal region 71 212 9.0E-58 T 28-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.741 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.5E-21 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 SUPERFAMILY SSF51161 32 316 6.19E-86 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Gene3D G3DSA:2.160.10.10 23 137 3.3E-19 T 28-03-2018 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 3.8E-128 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Gene3D G3DSA:2.160.10.10 191 341 3.6E-24 T 28-03-2018 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Gene3D G3DSA:2.160.10.10 138 190 8.1E-13 T 28-03-2018 CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 7.6E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 4.2E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 2.3E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19260 a6f226787378fa3770513ee9d7b6f01a 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Gene3D G3DSA:1.25.40.10 140 261 1.3E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 SUPERFAMILY SSF48452 139 253 2.86E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Pfam PF13174 Tetratricopeptide repeat 216 248 1.9E-7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Pfam PF13432 Tetratricopeptide repeat 157 212 6.7E-7 T 28-03-2018 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Gene3D G3DSA:1.20.5.50 35 81 1.2E-5 T 28-03-2018 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 142 258 3.8E-41 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Pfam PF16331 TolA binding protein trimerisation 37 110 4.4E-24 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CO704_RS16605 3683bb439f6b61af2e75423ba5b6835c 261 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 261 20.175 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CO704_RS20290 5f35992c795ff823a3c6878174d927d1 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.505 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CO704_RS20290 5f35992c795ff823a3c6878174d927d1 273 Pfam PF02673 Bacitracin resistance protein BacA 10 267 8.5E-86 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CO704_RS20290 5f35992c795ff823a3c6878174d927d1 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 5.2E-103 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 SUPERFAMILY SSF56047 2 129 6.93E-46 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 Gene3D G3DSA:3.30.1490.10 74 129 1.5E-22 T 28-03-2018 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 Gene3D G3DSA:3.30.1370.30 1 66 3.6E-25 T 28-03-2018 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 Pfam PF00410 Ribosomal protein S8 5 129 2.1E-48 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01165 4b085e125a3dc25197fb0a61922dfc59 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.737 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 SUPERFAMILY SSF103473 17 439 1.22E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 Gene3D G3DSA:1.20.1250.20 19 213 4.4E-30 T 28-03-2018 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 Gene3D G3DSA:1.20.1250.20 237 442 5.5E-26 T 28-03-2018 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 PIRSF PIRSF002808 6 442 8.6E-148 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 Pfam PF07690 Major Facilitator Superfamily 35 396 3.1E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS02020 82f342f7e0dffb12705a1e6045e0a480 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.3E-148 T 28-03-2018 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 SUPERFAMILY SSF51011 597 678 2.09E-17 T 28-03-2018 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Pfam PF13802 Galactose mutarotase-like 146 213 5.9E-24 T 28-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Pfam PF01055 Glycosyl hydrolases family 31 238 682 5.8E-113 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Gene3D G3DSA:2.60.40.1180 617 679 1.9E-21 T 28-03-2018 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Gene3D G3DSA:2.60.40.1180 680 782 1.1E-8 T 28-03-2018 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 SUPERFAMILY SSF51445 247 594 2.05E-65 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 SUPERFAMILY SSF74650 2 243 2.57E-46 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Pfam PF17137 Domain of unknown function (DUF5110) 700 767 3.7E-8 T 28-03-2018 IPR033403 Domain of unknown function DUF5110 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Gene3D G3DSA:3.20.20.80 238 616 4.5E-101 T 28-03-2018 CO704_RS07090 f4a22027a5bb9bd1846ce022786e5c59 787 Gene3D G3DSA:2.60.40.1760 1 237 7.2E-44 T 28-03-2018 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 Gene3D G3DSA:3.40.190.10 90 180 7.3E-16 T 28-03-2018 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 SUPERFAMILY SSF53850 88 289 1.67E-29 T 28-03-2018 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 Pfam PF03466 LysR substrate binding domain 90 288 3.5E-29 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 SUPERFAMILY SSF46785 4 112 2.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 Gene3D G3DSA:1.10.10.10 1 86 1.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05080 5531d0dd1a968908892202bbc7c512c1 306 Gene3D G3DSA:3.40.190.10 181 263 9.1E-10 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Pfam PF14520 Helix-hairpin-helix domain 370 411 0.0052 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.9E-9 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:3.30.300.20 278 347 1.9E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF69705 1 126 2.49E-41 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Pfam PF08529 NusA N-terminal domain 4 123 8.1E-37 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:3.30.1480.10 1 128 2.2E-45 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF47794 429 492 1.44E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.2E-21 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.4E-19 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:2.40.50.140 129 198 3.1E-13 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF47794 355 415 3.14E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SMART SM00316 133 200 4.3E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 4.1E-131 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:1.10.150.20 352 421 7.5E-16 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:1.10.150.20 427 494 3.3E-15 T 28-03-2018 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 SUPERFAMILY SSF50249 132 199 2.7E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.161 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Pfam PF13184 NusA-like KH domain 230 297 1.6E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CO704_RS01800 0756095b3b114a1080c12193c9f2e61d 495 Gene3D G3DSA:3.30.300.20 199 276 6.2E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-43 T 28-03-2018 CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 9.2E-38 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.012 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.0E-51 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01120 5aeae9e3ab06271f97647e6cf172c357 110 SUPERFAMILY SSF54843 1 109 6.28E-43 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Gene3D G3DSA:1.10.274.10 145 248 7.8E-13 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Pfam PF05524 PEP-utilising enzyme, N-terminal 117 234 2.2E-12 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Gene3D G3DSA:3.50.30.10 249 362 7.9E-8 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 SUPERFAMILY SSF55804 364 506 3.53E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 293 304 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Pfam PF00391 PEP-utilising enzyme, mobile domain 271 315 1.6E-7 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 369 491 4.0E-31 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Pfam PF00381 PTS HPr component phosphorylation site 12 84 9.0E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Gene3D G3DSA:3.30.1340.10 1 89 6.5E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 366 506 9.2E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 Gene3D G3DSA:3.40.930.10 363 508 5.1E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 SUPERFAMILY SSF47831 148 251 2.62E-13 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 SUPERFAMILY SSF52009 234 352 3.53E-15 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 SUPERFAMILY SSF55594 7 88 1.1E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.8E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.8E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08310 1596a63a378193627a1a113e7fbaeb82 512 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.8E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS08010 e8e22dfd18cf9bf07f67601040c5da8f 191 Pfam PF07081 Protein of unknown function (DUF1349) 7 181 3.1E-68 T 28-03-2018 IPR009784 Protein of unknown function DUF1349 CO704_RS08010 e8e22dfd18cf9bf07f67601040c5da8f 191 PIRSF PIRSF022704 2 191 1.9E-70 T 28-03-2018 IPR015987 Uncharacterised conserved protein UCP022704 CO704_RS08010 e8e22dfd18cf9bf07f67601040c5da8f 191 Gene3D G3DSA:2.60.120.200 1 183 2.7E-39 T 28-03-2018 CO704_RS08010 e8e22dfd18cf9bf07f67601040c5da8f 191 SUPERFAMILY SSF49899 2 180 7.91E-36 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 676 703 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 SUPERFAMILY SSF53706 15 629 2.09E-156 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 SUPERFAMILY SSF50692 632 773 5.2E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:3.90.55.10 484 553 4.2E-19 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:3.90.55.10 8 93 9.4E-8 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Pfam PF01568 Molydopterin dinucleotide binding domain 637 751 2.7E-25 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Pfam PF00384 Molybdopterin oxidoreductase 57 518 6.7E-103 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 14 774 0.0 T 28-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:3.40.228.10 413 483 3.2E-7 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:2.40.40.20 621 770 3.7E-31 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:3.40.228.10 152 412 8.6E-57 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 Gene3D G3DSA:3.40.228.10 554 620 3.3E-10 T 28-03-2018 CO704_RS24540 e1daa302f889a6928525a3a3f1f1526b 776 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 460 477 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS18450 cbc95173f39e26e8469e08f4138fbd15 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 1.0E-74 T 28-03-2018 IPR010843 Uncharacterised protein family AroM CO704_RS18450 cbc95173f39e26e8469e08f4138fbd15 225 Pfam PF07302 AroM protein 5 224 5.4E-62 T 28-03-2018 IPR010843 Uncharacterised protein family AroM CO704_RS18450 cbc95173f39e26e8469e08f4138fbd15 225 Gene3D G3DSA:3.40.50.1860 111 225 6.1E-6 T 28-03-2018 CO704_RS06005 bf82a834b36edb648b606a0851301fff 116 SUPERFAMILY SSF51182 8 104 3.28E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS06005 bf82a834b36edb648b606a0851301fff 116 Gene3D G3DSA:2.60.120.10 2 112 2.2E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS06005 bf82a834b36edb648b606a0851301fff 116 Pfam PF07883 Cupin domain 33 100 1.3E-16 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 Gene3D G3DSA:2.40.170.20 149 733 6.3E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 SUPERFAMILY SSF56935 31 437 1.54E-90 T 28-03-2018 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 SUPERFAMILY SSF56935 468 731 1.54E-90 T 28-03-2018 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 716 733 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 Gene3D G3DSA:2.170.130.10 23 148 1.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 46 733 3.4E-164 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 Pfam PF00593 TonB dependent receptor 394 730 1.6E-27 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS14460 2738280f848b3eeb09ead31311a5fd9e 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 146 5.9E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 Gene3D G3DSA:3.30.428.10 1 114 1.5E-28 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 SUPERFAMILY SSF54197 2 113 5.1E-35 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 Pfam PF01230 HIT domain 12 109 1.1E-29 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CO704_RS14505 d9dfcc043e86d351b606bd0046c74113 118 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 SMART SM00382 30 230 7.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.9E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 Pfam PF00005 ABC transporter 21 181 3.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 Gene3D G3DSA:3.40.50.300 1 253 6.1E-57 T 28-03-2018 CO704_RS00560 2d3128af443a66c2306a8084bdd93a9e 255 SUPERFAMILY SSF52540 4 253 3.76E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24275 c9defce5b26df2d2ceb1067fc342ca68 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 5 133 7.4E-57 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CO704_RS24275 c9defce5b26df2d2ceb1067fc342ca68 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 133 1.0E-51 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CO704_RS01535 f3d08a7e1dbaca2cda6f1c0aae224a03 374 Pfam PF03969 AFG1-like ATPase 5 370 1.8E-157 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CO704_RS01535 f3d08a7e1dbaca2cda6f1c0aae224a03 374 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.247 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CO704_RS01535 f3d08a7e1dbaca2cda6f1c0aae224a03 374 SUPERFAMILY SSF52540 67 208 5.21E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01535 f3d08a7e1dbaca2cda6f1c0aae224a03 374 Gene3D G3DSA:3.40.50.300 21 370 2.1E-13 T 28-03-2018 CO704_RS21750 e60b1593320e244832df819d3e787d69 508 SMART SM00052 251 494 7.3E-77 T 28-03-2018 IPR001633 EAL domain CO704_RS21750 e60b1593320e244832df819d3e787d69 508 Pfam PF00563 EAL domain 261 489 2.3E-58 T 28-03-2018 IPR001633 EAL domain CO704_RS21750 e60b1593320e244832df819d3e787d69 508 Pfam PF12792 CSS motif domain associated with EAL 40 224 1.2E-25 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CO704_RS21750 e60b1593320e244832df819d3e787d69 508 Gene3D G3DSA:3.20.20.450 254 507 1.4E-76 T 28-03-2018 IPR001633 EAL domain CO704_RS21750 e60b1593320e244832df819d3e787d69 508 SUPERFAMILY SSF141868 257 501 1.44E-72 T 28-03-2018 IPR001633 EAL domain CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 2.4E-76 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 PIRSF PIRSF006769 1 369 2.4E-137 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 Pfam PF01872 RibD C-terminal domain 148 363 6.3E-58 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 Gene3D G3DSA:3.40.140.10 1 125 2.3E-34 T 28-03-2018 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 Gene3D G3DSA:3.40.430.10 126 367 3.9E-66 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 3.8E-22 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 SUPERFAMILY SSF53597 145 363 3.27E-57 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 363 9.3E-152 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CO704_RS18310 e8adb5a7604cfbe4290ec0d29ef93eef 372 SUPERFAMILY SSF53927 4 146 9.2E-51 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS18150 580c7415ef07b7e02871ee41ac986be3 133 PIRSF PIRSF003230 1 133 2.5E-21 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CO704_RS18150 580c7415ef07b7e02871ee41ac986be3 133 Pfam PF13279 Thioesterase-like superfamily 11 126 6.9E-16 T 28-03-2018 CO704_RS18150 580c7415ef07b7e02871ee41ac986be3 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 8.6E-34 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CO704_RS18150 580c7415ef07b7e02871ee41ac986be3 133 SUPERFAMILY SSF54637 3 130 2.26E-38 T 28-03-2018 IPR029069 HotDog domain CO704_RS18150 580c7415ef07b7e02871ee41ac986be3 133 Gene3D G3DSA:3.10.129.10 1 133 5.0E-36 T 28-03-2018 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SMART SM00387 345 455 6.4E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SUPERFAMILY SSF47384 224 299 4.12E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 453 4.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 146 2.0E-10 T 28-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Pfam PF00672 HAMP domain 184 234 1.1E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Gene3D G3DSA:3.30.565.10 303 456 1.2E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SMART SM00388 238 300 5.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 299 1.1E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SUPERFAMILY SSF158472 184 236 2.35E-5 T 28-03-2018 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SUPERFAMILY SSF55874 289 453 7.07E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 Gene3D G3DSA:1.10.287.130 228 296 9.4E-16 T 28-03-2018 CO704_RS23685 ce2151ff643f507829b831bcb7e20dcc 456 SMART SM00304 184 237 2.4E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 9.0E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 Gene3D G3DSA:2.60.120.10 23 232 1.2E-41 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 Gene3D G3DSA:2.60.120.10 236 403 4.7E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 SMART SM00835 68 215 7.9E-14 T 28-03-2018 IPR006045 Cupin 1 GO:0045735 CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 SMART SM00835 251 392 3.4E-35 T 28-03-2018 IPR006045 Cupin 1 GO:0045735 CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 SUPERFAMILY SSF51182 47 401 6.22E-91 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 Pfam PF00190 Cupin 255 389 9.5E-25 T 28-03-2018 IPR006045 Cupin 1 GO:0045735 CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 Pfam PF00190 Cupin 81 209 7.6E-17 T 28-03-2018 IPR006045 Cupin 1 GO:0045735 CO704_RS05815 37e9df378d741a4eae824080eff74c79 403 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 38 402 6.1E-166 T 28-03-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 CO704_RS01605 36f5dcd31e0cc46db3e7fa40f13801a4 378 SUPERFAMILY SSF110738 1 375 3.66E-144 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CO704_RS01605 36f5dcd31e0cc46db3e7fa40f13801a4 378 PIRSF PIRSF006078 1 376 1.5E-138 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CO704_RS01605 36f5dcd31e0cc46db3e7fa40f13801a4 378 Pfam PF02595 Glycerate kinase family 3 374 4.3E-150 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CO704_RS01605 36f5dcd31e0cc46db3e7fa40f13801a4 378 Gene3D G3DSA:3.90.1510.10 42 276 3.1E-94 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CO704_RS01605 36f5dcd31e0cc46db3e7fa40f13801a4 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.4E-162 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 Gene3D G3DSA:3.40.50.1470 1 194 3.4E-69 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 5.1E-71 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.32 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 SUPERFAMILY SSF53178 3 192 1.11E-70 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CO704_RS09610 e4a067c19ff888885af6eec29372161b 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 3.4E-53 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 9.8E-85 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 Pfam PF05683 Fumarase C-terminus 332 537 3.0E-93 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 SUPERFAMILY SSF117457 362 536 2.09E-61 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 PIRSF PIRSF001394 30 549 3.6E-232 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 1.5E-31 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 Gene3D G3DSA:3.20.130.10 359 536 8.1E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS18660 71b1fc1e2e7c18c8980b15f93ccd7529 549 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.5E-60 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 PIRSF PIRSF000292 1 312 3.6E-136 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 5.6E-121 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 SUPERFAMILY SSF49503 119 282 9.74E-55 T 28-03-2018 IPR008972 Cupredoxin CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 Gene3D G3DSA:1.10.287.90 28 113 1.0E-19 T 28-03-2018 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 Gene3D G3DSA:2.60.40.420 114 281 7.9E-55 T 28-03-2018 IPR008972 Cupredoxin CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 219 2.6E-6 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 SUPERFAMILY SSF81464 29 116 5.4E-24 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18225 c6cc5a76a67dec4c8c33205ffd853ed0 320 Pfam PF06481 COX Aromatic Rich Motif 239 285 1.4E-20 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CO704_RS22435 dd6ecb996a72bcec6efe725cb3fc1c19 330 Gene3D G3DSA:1.10.3470.10 46 323 7.6E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS22435 dd6ecb996a72bcec6efe725cb3fc1c19 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 317 1.1E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-238 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 4.5E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 SUPERFAMILY SSF52540 6 219 5.35E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22975 63f711f62c851893f72af302591a65e1 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.1E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.9E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS22975 63f711f62c851893f72af302591a65e1 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.906 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 7.9E-34 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Gene3D G3DSA:3.40.50.300 2 74 5.6E-11 T 28-03-2018 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Gene3D G3DSA:2.40.30.10 206 299 1.1E-31 T 28-03-2018 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Gene3D G3DSA:3.40.50.300 75 203 7.5E-31 T 28-03-2018 CO704_RS22975 63f711f62c851893f72af302591a65e1 394 SUPERFAMILY SSF50447 205 301 6.09E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS22975 63f711f62c851893f72af302591a65e1 394 SUPERFAMILY SSF50465 298 393 2.79E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CO704_RS22975 63f711f62c851893f72af302591a65e1 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 28-03-2018 CO704_RS23300 004e314563ea9eea0a1edb2b0e4ba944 461 Pfam PF00324 Amino acid permease 16 445 2.9E-104 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS23300 004e314563ea9eea0a1edb2b0e4ba944 461 PIRSF PIRSF006060 1 461 8.6E-65 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS23300 004e314563ea9eea0a1edb2b0e4ba944 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Gene3D G3DSA:3.40.50.300 21 184 1.4E-27 T 28-03-2018 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 SUPERFAMILY SSF46785 260 333 1.85E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 SMART SM00382 54 181 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 SUPERFAMILY SSF52540 23 254 5.5E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 2.0E-32 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 3.6E-116 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Gene3D G3DSA:1.10.10.10 260 330 2.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Gene3D G3DSA:1.10.8.60 187 257 1.0E-31 T 28-03-2018 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 7.0E-37 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.1E-147 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CO704_RS08865 6392997b5d97a5eb6a3f3f96382b703a 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 185.276 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 1.6E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.6E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 1.6E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 Gene3D G3DSA:1.10.10.10 3 98 6.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 Pfam PF01022 Bacterial regulatory protein, arsR family 24 70 4.5E-13 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 SMART SM00418 17 96 4.8E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS04020 975c4d59111f96eca2dfdfaefb88e90b 100 SUPERFAMILY SSF46785 12 99 2.77E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01620 331851962d21c23fb564b78add1013e4 165 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS01620 331851962d21c23fb564b78add1013e4 165 Gene3D G3DSA:3.40.930.10 8 157 7.8E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS01620 331851962d21c23fb564b78add1013e4 165 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 2.6E-36 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS01620 331851962d21c23fb564b78add1013e4 165 SUPERFAMILY SSF55804 9 155 1.57E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS01620 331851962d21c23fb564b78add1013e4 165 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 1.5E-61 T 28-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CO704_RS10230 f45f5a1209e60746d995ca04679682d4 178 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 2.9E-66 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CO704_RS10230 f45f5a1209e60746d995ca04679682d4 178 Pfam PF04279 Intracellular septation protein A 1 175 2.5E-65 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CO704_RS10230 f45f5a1209e60746d995ca04679682d4 178 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.57 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 Gene3D G3DSA:3.40.50.2300 63 182 1.4E-35 T 28-03-2018 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 4.0E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 SUPERFAMILY SSF53822 68 334 1.99E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 Gene3D G3DSA:3.40.50.2300 183 312 4.3E-43 T 28-03-2018 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 Pfam PF13377 Periplasmic binding protein-like domain 175 311 4.6E-31 T 28-03-2018 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 Gene3D G3DSA:1.10.260.40 9 62 4.6E-19 T 28-03-2018 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 SUPERFAMILY SSF47413 7 67 5.34E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS24825 005b17e45fc5318e1fc6845844d3e8ce 345 SMART SM00354 8 79 2.9E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 Pfam PF07702 UTRA domain 96 235 1.3E-29 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 4.5E-92 T 28-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 SMART SM00866 96 236 2.2E-27 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 SUPERFAMILY SSF64288 63 240 3.77E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 Gene3D G3DSA:1.10.10.10 4 76 3.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 SMART SM00345 17 75 3.4E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 Gene3D G3DSA:3.40.1410.10 80 241 2.2E-34 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS22330 2597d19a49448da635bcb0984c9b2a7e 241 SUPERFAMILY SSF46785 8 79 3.76E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 2.6E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 28-03-2018 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 SMART SM00354 3 73 3.8E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 SUPERFAMILY SSF53822 63 337 1.81E-51 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 Gene3D G3DSA:3.40.50.2300 171 338 6.0E-33 T 28-03-2018 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 318 2.6E-32 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 Gene3D G3DSA:1.10.260.40 4 59 2.0E-18 T 28-03-2018 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 SUPERFAMILY SSF47413 1 61 2.49E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS17590 631275d4e83e11dc2d53e0a3d744c9a8 338 Gene3D G3DSA:3.40.50.2300 60 170 3.0E-23 T 28-03-2018 CO704_RS01695 f585db6cbc42f41b8503e4e928b7f437 84 Pfam PF01722 BolA-like protein 18 74 5.0E-13 T 28-03-2018 IPR002634 BolA protein CO704_RS01695 f585db6cbc42f41b8503e4e928b7f437 84 SUPERFAMILY SSF82657 2 82 5.1E-28 T 28-03-2018 IPR002634 BolA protein CO704_RS01695 f585db6cbc42f41b8503e4e928b7f437 84 PIRSF PIRSF003113 1 83 1.3E-20 T 28-03-2018 IPR002634 BolA protein CO704_RS01695 f585db6cbc42f41b8503e4e928b7f437 84 Gene3D G3DSA:3.30.300.90 1 83 6.8E-25 T 28-03-2018 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.2E-50 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 Gene3D G3DSA:3.40.50.720 52 244 3.9E-67 T 28-03-2018 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 Gene3D G3DSA:3.40.50.720 1 51 3.4E-11 T 28-03-2018 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 SUPERFAMILY SSF51735 4 243 3.25E-87 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.1E-101 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.5E-67 T 28-03-2018 CO704_RS14550 b2bdedaf193104f6f44a184444cbee84 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.2E-5 T 28-03-2018 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Gene3D G3DSA:3.40.50.920 541 666 6.4E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Gene3D G3DSA:3.40.50.970 1 364 6.4E-127 T 28-03-2018 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 SUPERFAMILY SSF52518 5 320 2.44E-121 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 SUPERFAMILY SSF52518 331 526 1.29E-69 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.9E-17 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Gene3D G3DSA:3.40.50.970 365 540 1.3E-43 T 28-03-2018 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.4E-172 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 SMART SM00861 355 525 8.4E-70 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 SUPERFAMILY SSF52922 533 665 3.8E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.7E-48 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS05745 061d8796ab399fc573bba7871de934c4 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CO704_RS03505 6afc0700d4b5fc7cff5927ccc2c2dde7 109 SUPERFAMILY SSF158452 2 106 2.48E-37 T 28-03-2018 IPR023376 YqcC-like domain CO704_RS03505 6afc0700d4b5fc7cff5927ccc2c2dde7 109 PIRSF PIRSF006257 1 108 1.6E-37 T 28-03-2018 IPR007384 Protein of unknown function UCP006257 CO704_RS03505 6afc0700d4b5fc7cff5927ccc2c2dde7 109 Gene3D G3DSA:1.20.1440.40 3 104 5.2E-37 T 28-03-2018 IPR023376 YqcC-like domain CO704_RS03505 6afc0700d4b5fc7cff5927ccc2c2dde7 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 4.5E-35 T 28-03-2018 IPR023376 YqcC-like domain CO704_RS25150 0ff7c619690ccf73c0a013e71bf9835f 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 3.8E-146 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CO704_RS25150 0ff7c619690ccf73c0a013e71bf9835f 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 6.6E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CO704_RS10885 0ff7c619690ccf73c0a013e71bf9835f 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 3.8E-146 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CO704_RS10885 0ff7c619690ccf73c0a013e71bf9835f 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 6.6E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CO704_RS08620 83471b14e0e48edba0d4beab8a2ce730 165 Gene3D G3DSA:1.20.1260.10 1 161 3.7E-41 T 28-03-2018 IPR012347 Ferritin-related CO704_RS08620 83471b14e0e48edba0d4beab8a2ce730 165 SUPERFAMILY SSF47240 4 160 1.5E-54 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS08620 83471b14e0e48edba0d4beab8a2ce730 165 Pfam PF00210 Ferritin-like domain 7 143 2.6E-35 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CO704_RS14390 71a523c976ff437ce88f30a7d43cf49f 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 8.4E-158 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CO704_RS14390 71a523c976ff437ce88f30a7d43cf49f 414 Pfam PF12704 MacB-like periplasmic core domain 27 237 2.5E-14 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS14390 71a523c976ff437ce88f30a7d43cf49f 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 1.6E-213 T 28-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 CO704_RS14390 71a523c976ff437ce88f30a7d43cf49f 414 Gene3D G3DSA:1.20.1250.20 1 404 0.026 T 28-03-2018 CO704_RS14390 71a523c976ff437ce88f30a7d43cf49f 414 Pfam PF02687 FtsX-like permease family 301 407 2.7E-14 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SUPERFAMILY SSF48452 477 530 1.71E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SUPERFAMILY SSF48452 273 421 1.71E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 805 1145 4.4E-117 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Pfam PF14559 Tetratricopeptide repeat 164 220 4.2E-6 T 28-03-2018 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Pfam PF14559 Tetratricopeptide repeat 614 665 1.4E-7 T 28-03-2018 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:1.25.40.10 16 110 7.8E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Pfam PF13181 Tetratricopeptide repeat 307 335 2.6E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:1.25.40.10 111 346 1.0E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:1.25.40.10 350 401 3.3E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SUPERFAMILY SSF48452 464 662 1.04E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:1.25.40.10 402 444 2.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:1.25.40.10 460 762 1.8E-24 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SUPERFAMILY SSF48452 286 335 3.8E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SUPERFAMILY SSF48452 59 217 3.8E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 Gene3D G3DSA:2.40.160.20 946 1132 7.1E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SMART SM00028 303 336 0.0039 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SMART SM00028 351 384 0.27 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SMART SM00028 461 494 31.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SMART SM00028 112 145 480.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24590 6b6eed8e018ba847eb57e1d32bb8446c 1165 SMART SM00028 385 418 33.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 SUPERFAMILY SSF53901 2 230 1.05E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 Gene3D G3DSA:3.40.47.10 236 387 3.5E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 SUPERFAMILY SSF53901 201 386 3.95E-48 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 SMART SM00825 Beta-ketoacyl synthase 4 387 8.4E-10 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 228 4.1E-19 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 Gene3D G3DSA:3.40.47.10 2 234 1.2E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25675 038b1beaaa196631425767f3719fcf99 388 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 235 335 4.3E-27 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CO704_RS02670 661265bea7422d0c75a3f64dd12a77b9 433 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 12 427 8.3E-162 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS02670 661265bea7422d0c75a3f64dd12a77b9 433 PIRSF PIRSF000337 6 433 1.3E-145 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS02670 661265bea7422d0c75a3f64dd12a77b9 433 SUPERFAMILY SSF51679 7 431 1.01E-123 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS02670 661265bea7422d0c75a3f64dd12a77b9 433 Gene3D G3DSA:3.20.20.30 6 433 1.1E-98 T 28-03-2018 CO704_RS02670 661265bea7422d0c75a3f64dd12a77b9 433 Pfam PF00296 Luciferase-like monooxygenase 25 385 1.4E-58 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.7E-46 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 SUPERFAMILY SSF54980 393 468 7.19E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Gene3D G3DSA:3.40.50.300 8 281 5.9E-36 T 28-03-2018 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Gene3D G3DSA:3.30.70.870 394 469 2.7E-10 T 28-03-2018 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 157 2.8E-18 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.362 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 SUPERFAMILY SSF52540 10 277 1.41E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.6E-47 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.6E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 SUPERFAMILY SSF50447 262 393 1.52E-28 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.7E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.7E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.7E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.7E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.7E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 Gene3D G3DSA:2.40.30.10 282 387 1.7E-21 T 28-03-2018 CO704_RS20140 9ba839d05d70a00333faf1bc01ee4bf8 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Gene3D G3DSA:3.90.70.10 12 146 2.6E-24 T 28-03-2018 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Pfam PF00664 ABC transporter transmembrane region 162 421 8.1E-26 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Pfam PF03412 Peptidase C39 family 12 135 3.6E-23 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 SUPERFAMILY SSF52540 468 681 2.44E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Pfam PF00005 ABC transporter 490 639 9.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Gene3D G3DSA:1.20.1560.10 161 465 1.2E-24 T 28-03-2018 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 SUPERFAMILY SSF90123 166 458 7.19E-37 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 Gene3D G3DSA:3.40.50.300 470 682 1.2E-46 T 28-03-2018 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 ProSitePatterns PS00211 ABC transporters family signature. 611 625 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00045 0f34bc10be6c845e5fa35a2cd961f86f 682 SMART SM00382 498 682 2.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS14540 4da8a554536111cc468e0520b9798400 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 6.4E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CO704_RS14540 4da8a554536111cc468e0520b9798400 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 6.0E-195 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 SUPERFAMILY SSF53901 3 252 2.2E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 SMART SM00825 Beta-ketoacyl synthase 6 413 1.3E-13 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CO704_RS14540 4da8a554536111cc468e0520b9798400 413 Gene3D G3DSA:3.40.47.10 6 260 5.8E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 SUPERFAMILY SSF53901 215 412 1.59E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 PIRSF PIRSF000447 1 413 1.0E-202 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 Gene3D G3DSA:3.40.47.10 263 413 3.5E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14540 4da8a554536111cc468e0520b9798400 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.0E-62 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS14540 4da8a554536111cc468e0520b9798400 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 PIRSF PIRSF000538 2 494 8.4E-127 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 4.1E-64 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 Gene3D G3DSA:3.30.420.40 247 500 2.2E-48 T 28-03-2018 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 SUPERFAMILY SSF53067 251 490 7.45E-46 T 28-03-2018 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 SUPERFAMILY SSF53067 5 252 3.63E-72 T 28-03-2018 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 440 1.5E-26 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS00115 502f6b709f9fcb392d2e42213e3f5af5 509 Gene3D G3DSA:3.30.420.40 1 246 7.9E-79 T 28-03-2018 CO704_RS00975 436b82d151d8de1c002b4e01a7007024 134 Gene3D G3DSA:2.20.25.10 1 29 5.3E-16 T 28-03-2018 CO704_RS00975 436b82d151d8de1c002b4e01a7007024 134 Pfam PF02566 OsmC-like protein 30 127 3.6E-20 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS00975 436b82d151d8de1c002b4e01a7007024 134 SUPERFAMILY SSF82784 1 133 3.66E-44 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS00975 436b82d151d8de1c002b4e01a7007024 134 Gene3D G3DSA:3.30.300.20 35 133 3.1E-21 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS14985 23b100198c3b215552e336fd10756764 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Gene3D G3DSA:1.20.5.550 89 137 9.8E-17 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Gene3D G3DSA:3.40.605.10 648 901 3.4E-70 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 SUPERFAMILY SSF47598 3 45 1.67E-10 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 147 259 2.5E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 PIRSF PIRSF000197 74 1320 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 SUPERFAMILY SSF51730 262 617 6.28E-123 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Gene3D G3DSA:1.10.1220.10 2 49 4.6E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Pfam PF01619 Proline dehydrogenase 270 569 1.2E-99 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 SUPERFAMILY SSF81935 88 261 3.92E-65 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 SUPERFAMILY SSF53720 657 1110 5.37E-124 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Gene3D G3DSA:3.40.309.10 902 1094 9.6E-47 T 28-03-2018 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Gene3D G3DSA:3.20.20.220 178 610 1.8E-110 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CO704_RS14985 23b100198c3b215552e336fd10756764 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1113 1.6E-259 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CO704_RS14985 23b100198c3b215552e336fd10756764 1320 Pfam PF00171 Aldehyde dehydrogenase family 661 1106 7.8E-113 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 SUPERFAMILY SSF54611 2 141 1.33E-53 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.6E-57 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.388 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 1.5E-68 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.2E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.2E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.2E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.2E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS23705 a18a1838b174db7a87a60fcb7fbf3b39 155 Gene3D G3DSA:3.10.420.10 1 153 5.5E-57 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.40.50.261 130 284 3.6E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SUPERFAMILY SSF52210 125 286 4.45E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Pfam PF00583 Acetyltransferase (GNAT) family 759 863 2.8E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SUPERFAMILY SSF56059 481 687 1.57E-27 T 28-03-2018 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SMART SM00881 9 104 1.2E-22 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 5.5E-45 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SUPERFAMILY SSF52210 287 447 1.7E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.40.50.720 1 129 1.5E-27 T 28-03-2018 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.30.1490.20 500 561 4.3E-26 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Pfam PF13549 ATP-grasp domain 472 693 1.3E-74 T 28-03-2018 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.40.50.261 285 452 2.7E-33 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Pfam PF13380 CoA binding domain 13 129 2.1E-19 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.40.630.30 716 882 4.4E-24 T 28-03-2018 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 Gene3D G3DSA:3.30.470.20 562 701 5.5E-23 T 28-03-2018 CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SUPERFAMILY SSF51735 4 136 5.91E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS04515 e566af84da6ebc681c001f239e0f586e 886 SUPERFAMILY SSF55729 616 866 1.05E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 523 1005 5.1E-74 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 Pfam PF03797 Autotransporter beta-domain 734 980 1.7E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 Gene3D G3DSA:2.160.20.20 100 642 4.7E-44 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 SUPERFAMILY SSF103515 699 1005 1.83E-45 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 Gene3D G3DSA:2.40.128.130 689 1005 3.4E-51 T 28-03-2018 CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 SMART SM00869 731 992 1.4E-36 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 Pfam PF12951 Passenger-associated-transport-repeat 422 450 2.4E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CO704_RS00240 2dbb72ba49e7329becfc7279218800e8 1005 SUPERFAMILY SSF51126 150 638 2.61E-39 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 Gene3D G3DSA:3.40.50.300 1 285 2.3E-128 T 28-03-2018 CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 Pfam PF06418 CTP synthase N-terminus 5 266 2.5E-125 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.354 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 7.2E-265 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 SUPERFAMILY SSF52317 289 542 4.89E-88 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 Gene3D G3DSA:3.40.50.880 286 543 3.2E-76 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 9.1E-64 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS03555 e5811491f69058c1593beded22b9bff8 545 SUPERFAMILY SSF52540 3 269 8.27E-122 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09415 7dfa4392a73c860c9d99e928ec90e665 294 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 287 2.5E-49 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS09415 7dfa4392a73c860c9d99e928ec90e665 294 SUPERFAMILY SSF53850 30 292 1.7E-52 T 28-03-2018 CO704_RS09415 7dfa4392a73c860c9d99e928ec90e665 294 Gene3D G3DSA:3.40.190.10 175 291 1.4E-18 T 28-03-2018 CO704_RS09415 7dfa4392a73c860c9d99e928ec90e665 294 Gene3D G3DSA:3.40.190.10 18 174 1.0E-29 T 28-03-2018 CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 Gene3D G3DSA:1.10.10.10 135 197 4.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 SUPERFAMILY SSF46894 124 197 1.39E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 SUPERFAMILY SSF55785 8 109 5.33E-8 T 28-03-2018 IPR000014 PAS domain CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 Pfam PF08448 PAS fold 8 115 6.1E-9 T 28-03-2018 IPR013656 PAS fold-4 CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 Gene3D G3DSA:3.30.450.20 4 113 3.9E-5 T 28-03-2018 CO704_RS25750 7b4f96974aaed683aa9f6b2e21cc19d0 214 SMART SM00421 135 192 0.0047 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 Gene3D G3DSA:3.90.76.10 37 181 4.3E-41 T 28-03-2018 CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 PIRSF PIRSF002741 5 512 8.4E-111 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 Gene3D G3DSA:3.40.190.10 182 274 4.8E-27 T 28-03-2018 CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 1.2E-98 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 SUPERFAMILY SSF53850 30 511 9.39E-146 T 28-03-2018 CO704_RS07140 84adc6ddeb77464a1b5362c89a134a41 512 Gene3D G3DSA:3.10.105.10 275 486 3.7E-60 T 28-03-2018 CO704_RS07425 ee5fd6a2648c14af11e293028f086446 617 Pfam PF05170 AsmA family 240 510 1.4E-20 T 28-03-2018 IPR007844 AsmA CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 Gene3D G3DSA:3.50.50.60 375 482 3.6E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 SUPERFAMILY SSF51971 333 521 1.88E-41 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 Gene3D G3DSA:3.20.20.70 2 369 1.3E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 Gene3D G3DSA:3.50.50.60 483 625 6.8E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 649 8.0E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.1E-11 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 1.1E-11 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 1.1E-11 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 4.7E-5 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 4.7E-5 T 28-03-2018 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 331 3.6E-91 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 SUPERFAMILY SSF51905 468 627 5.49E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS20625 8cdf848fcebeb9c5b567fed81e941574 672 SUPERFAMILY SSF51395 1 362 3.66E-109 T 28-03-2018 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 Pfam PF00293 NUDIX domain 4 141 4.0E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 Gene3D G3DSA:3.90.79.10 1 147 2.8E-29 T 28-03-2018 CO704_RS08845 043bc688ed65defd83c8b680be497b69 147 SUPERFAMILY SSF55811 2 136 1.49E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS04095 095e853bcf72b29a3db19864c41ee9eb 89 SUPERFAMILY SSF47598 5 82 1.67E-21 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS04095 095e853bcf72b29a3db19864c41ee9eb 89 Gene3D G3DSA:1.10.1220.10 5 48 1.7E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS04095 095e853bcf72b29a3db19864c41ee9eb 89 Pfam PF08681 Protein of unknown function (DUF1778) 8 86 6.4E-25 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 CO704_RS04095 095e853bcf72b29a3db19864c41ee9eb 89 Gene3D G3DSA:1.20.890.30 52 87 1.2E-13 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 Gene3D G3DSA:3.30.70.260 284 370 2.4E-19 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 SUPERFAMILY SSF55021 296 394 1.95E-17 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 SUPERFAMILY SSF55021 377 448 3.31E-14 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 SUPERFAMILY SSF53633 4 292 4.97E-76 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 1.2E-145 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 Gene3D G3DSA:3.40.1160.10 1 283 4.7E-64 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 Gene3D G3DSA:3.30.70.260 371 449 2.0E-15 T 28-03-2018 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 Pfam PF00696 Amino acid kinase family 4 277 3.0E-47 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 3.1E-135 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 PIRSF PIRSF000726 2 449 4.3E-157 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS22750 fdd1b99ea359b12b31b82344a014e4f7 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Gene3D G3DSA:1.10.8.10 122 200 5.1E-30 T 28-03-2018 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 1.3E-232 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Gene3D G3DSA:1.10.8.10 201 230 2.1E-17 T 28-03-2018 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Gene3D G3DSA:1.10.8.60 336 432 5.9E-29 T 28-03-2018 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 134 4.1E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 SUPERFAMILY SSF52540 3 442 6.23E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 SMART SM01086 336 435 1.7E-22 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 406 4.8E-5 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Gene3D G3DSA:1.10.8.10 231 243 0.021 T 28-03-2018 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 SMART SM00382 49 333 2.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 330 5.0E-42 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Gene3D G3DSA:3.40.50.300 12 121 6.0E-4 T 28-03-2018 CO704_RS23600 297db30c9bddb4022b1a5334a27c5c49 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.595 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 SUPERFAMILY SSF56425 720 866 1.5E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 484 917 1.4E-148 T 28-03-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 339 4.2E-70 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 SUPERFAMILY SSF51905 865 924 1.61E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 SUPERFAMILY SSF51905 478 737 1.61E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 870 892 3.7E-5 T 28-03-2018 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 485 504 3.7E-5 T 28-03-2018 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Gene3D G3DSA:3.50.50.60 465 748 7.3E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Gene3D G3DSA:3.50.50.60 845 926 1.2E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Pfam PF00890 FAD binding domain 484 906 1.1E-87 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 SUPERFAMILY SSF51395 5 344 1.91E-96 T 28-03-2018 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 SMART SM00900 388 465 0.0043 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Gene3D G3DSA:3.90.700.10 749 844 4.3E-33 T 28-03-2018 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Pfam PF04205 FMN-binding domain 400 462 1.0E-4 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS18650 458a23197d8c386136a879dd1900c33d 926 Gene3D G3DSA:3.20.20.70 1 353 1.0E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 SUPERFAMILY SSF53850 21 517 3.26E-99 T 28-03-2018 CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 5.7E-66 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 Gene3D G3DSA:3.90.76.10 36 190 2.3E-24 T 28-03-2018 CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 Gene3D G3DSA:3.10.105.10 290 496 1.8E-35 T 28-03-2018 CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 Gene3D G3DSA:3.40.190.10 194 289 1.5E-17 T 28-03-2018 CO704_RS20555 f4ecb8c273a77f1550b05d552ff207dc 522 PIRSF PIRSF002741 6 520 1.2E-66 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 Pfam PF13439 Glycosyltransferase Family 4 15 209 1.5E-7 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 Gene3D G3DSA:3.40.50.2000 216 391 1.3E-34 T 28-03-2018 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 SUPERFAMILY SSF53756 14 63 3.36E-57 T 28-03-2018 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 SUPERFAMILY SSF53756 117 404 3.36E-57 T 28-03-2018 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 4.1E-235 T 28-03-2018 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 Pfam PF00534 Glycosyl transferases group 1 220 367 2.3E-35 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS07525 b64381f06389bbfecbabca8300311e85 406 Gene3D G3DSA:3.40.50.2000 15 215 0.0024 T 28-03-2018 CO704_RS08195 b75bf86d9925637a625f98774d71d548 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.48 T 28-03-2018 IPR010384 MtfA family CO704_RS08195 b75bf86d9925637a625f98774d71d548 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 19 242 5.7E-62 T 28-03-2018 IPR010384 MtfA family CO704_RS08195 b75bf86d9925637a625f98774d71d548 265 Gene3D G3DSA:3.40.390.10 76 244 6.4E-21 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CO704_RS08195 b75bf86d9925637a625f98774d71d548 265 SUPERFAMILY SSF55486 34 245 1.25E-38 T 28-03-2018 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 328 37.883 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 Pfam PF04055 Radical SAM superfamily 18 180 5.6E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 311 3.7E-39 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 Gene3D G3DSA:3.20.20.70 1 328 2.1E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 SMART SM00729 13 225 6.5E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 SUPERFAMILY SSF102114 4 277 1.96E-68 T 28-03-2018 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 328 5.1E-107 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CO704_RS16435 11d29518307c72cefb33a4fa13838e6c 328 Pfam PF13353 4Fe-4S single cluster domain 22 124 1.6E-7 T 28-03-2018 CO704_RS13670 da1297f5fc8e8d84aefa90ecb99e47d8 546 Gene3D G3DSA:3.30.200.20 103 243 4.0E-22 T 28-03-2018 CO704_RS13670 da1297f5fc8e8d84aefa90ecb99e47d8 546 SUPERFAMILY SSF56112 96 158 1.95E-25 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS13670 da1297f5fc8e8d84aefa90ecb99e47d8 546 SUPERFAMILY SSF56112 193 426 1.95E-25 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS13670 da1297f5fc8e8d84aefa90ecb99e47d8 546 Pfam PF03109 ABC1 family 114 231 1.3E-33 T 28-03-2018 IPR004147 UbiB domain CO704_RS23105 e18ec06e08578fd7e08f70a5c69a8d54 185 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 157 18.455 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CO704_RS23105 e18ec06e08578fd7e08f70a5c69a8d54 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.0E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CO704_RS23105 e18ec06e08578fd7e08f70a5c69a8d54 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.0E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CO704_RS23105 e18ec06e08578fd7e08f70a5c69a8d54 185 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.0E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CO704_RS23105 e18ec06e08578fd7e08f70a5c69a8d54 185 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.2E-32 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 SUPERFAMILY SSF52540 19 201 9.19E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10625 9efed2ee22fd035c807879d835136503 576 Pfam PF00005 ABC transporter 20 154 6.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 Pfam PF00005 ABC transporter 320 444 4.4E-15 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 SMART SM00382 322 488 4.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10625 9efed2ee22fd035c807879d835136503 576 SMART SM00382 29 200 9.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10625 9efed2ee22fd035c807879d835136503 576 Gene3D G3DSA:3.40.50.300 319 575 2.2E-35 T 28-03-2018 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 Gene3D G3DSA:3.40.50.300 1 294 6.6E-45 T 28-03-2018 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS10625 9efed2ee22fd035c807879d835136503 576 SUPERFAMILY SSF52540 319 501 6.87E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 SUPERFAMILY SSF111369 100 144 3.4E-8 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 SUPERFAMILY SSF111369 176 242 3.4E-8 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 Gene3D G3DSA:2.40.50.100 188 293 0.013 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 SUPERFAMILY SSF111369 44 119 2.75E-10 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 Pfam PF13533 Biotin-lipoyl like 44 88 1.5E-14 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 Gene3D G3DSA:1.10.287.470 118 166 5.2E-10 T 28-03-2018 CO704_RS10655 c7d3bbd93028373542b27b3c6952ba9d 353 Gene3D G3DSA:2.40.50.100 44 117 9.3E-16 T 28-03-2018 CO704_RS05310 ffd3788ab0fb6536a4ab6fe7e1df7a5b 268 PIRSF PIRSF002854 1 266 8.1E-99 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS05310 ffd3788ab0fb6536a4ab6fe7e1df7a5b 268 Gene3D G3DSA:3.40.190.10 119 264 2.4E-49 T 28-03-2018 CO704_RS05310 ffd3788ab0fb6536a4ab6fe7e1df7a5b 268 Gene3D G3DSA:3.40.190.10 23 118 1.8E-18 T 28-03-2018 CO704_RS05310 ffd3788ab0fb6536a4ab6fe7e1df7a5b 268 Pfam PF03180 NLPA lipoprotein 27 264 1.8E-78 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS05310 ffd3788ab0fb6536a4ab6fe7e1df7a5b 268 SUPERFAMILY SSF53850 27 265 7.24E-68 T 28-03-2018 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 SMART SM00354 5 75 1.0E-23 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 2.3E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Gene3D G3DSA:3.40.50.2300 62 168 2.0E-25 T 28-03-2018 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Gene3D G3DSA:1.10.260.40 21 61 1.9E-22 T 28-03-2018 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Gene3D G3DSA:1.10.10.10 1 20 0.003 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.0E-22 T 28-03-2018 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 SUPERFAMILY SSF47413 5 63 3.75E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 Gene3D G3DSA:3.40.50.2300 169 333 5.4E-31 T 28-03-2018 CO704_RS11660 eafc74c64d40d8a6ce93898a6fe94e32 335 SUPERFAMILY SSF53822 62 317 7.66E-49 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 Gene3D G3DSA:2.60.120.10 35 122 0.0017 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 Gene3D G3DSA:1.10.10.60 192 250 2.1E-8 T 28-03-2018 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 SUPERFAMILY SSF46689 249 302 2.91E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 Gene3D G3DSA:1.10.10.60 251 304 1.2E-11 T 28-03-2018 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 SMART SM00342 214 298 1.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 Pfam PF12833 Helix-turn-helix domain 220 300 2.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 2.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 2.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS11880 d27c41582be5910975d4131dd28a22e3 304 Pfam PF14525 AraC-binding-like domain 13 185 2.0E-19 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CO704_RS07880 4af5fbab188d0a4726e9e502ba11485e 462 PIRSF PIRSF006060 4 453 1.7E-79 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS07880 4af5fbab188d0a4726e9e502ba11485e 462 Pfam PF00324 Amino acid permease 29 430 1.6E-41 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS23155 c71220b566f20b3a0587d7a0874f8ba9 299 SUPERFAMILY SSF103481 175 277 1.31E-7 T 28-03-2018 CO704_RS23155 c71220b566f20b3a0587d7a0874f8ba9 299 SUPERFAMILY SSF103481 35 131 9.42E-8 T 28-03-2018 CO704_RS23155 c71220b566f20b3a0587d7a0874f8ba9 299 Pfam PF00892 EamA-like transporter family 3 129 1.2E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS23155 c71220b566f20b3a0587d7a0874f8ba9 299 Pfam PF00892 EamA-like transporter family 139 274 3.2E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS23155 c71220b566f20b3a0587d7a0874f8ba9 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.5E-86 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CO704_RS03695 86118d9816a05d7fd3a87ce40b5eb7c5 108 Gene3D G3DSA:1.20.5.1000 27 78 1.4E-4 T 28-03-2018 CO704_RS03695 86118d9816a05d7fd3a87ce40b5eb7c5 108 Pfam PF04977 Septum formation initiator 11 89 4.5E-30 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CO704_RS03695 86118d9816a05d7fd3a87ce40b5eb7c5 108 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.438 T 28-03-2018 IPR023081 Cell division protein FtsB CO704_RS10645 3f1c2e3b7448df9cfa6c8b2667dafbdb 183 SUPERFAMILY SSF52218 1 182 3.41E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS10645 3f1c2e3b7448df9cfa6c8b2667dafbdb 183 Gene3D G3DSA:3.40.50.360 1 183 1.6E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS10645 3f1c2e3b7448df9cfa6c8b2667dafbdb 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CO704_RS10645 3f1c2e3b7448df9cfa6c8b2667dafbdb 183 Pfam PF03358 NADPH-dependent FMN reductase 41 123 4.7E-10 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 SUPERFAMILY SSF51569 4 357 2.01E-131 T 28-03-2018 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 Gene3D G3DSA:3.20.20.70 4 358 3.4E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 PIRSF PIRSF001359 13 359 2.5E-104 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.9E-88 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 2.6E-190 T 28-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 1.5E-116 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS02915 ad0d3a056591485131d9ee12cfd02938 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 Pfam PF00232 Glycosyl hydrolase family 1 4 473 6.6E-132 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 Gene3D G3DSA:3.20.20.80 1 476 2.3E-153 T 28-03-2018 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 SUPERFAMILY SSF51445 2 474 9.72E-163 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.9E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 1.9E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 1.9E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 1.9E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS20415 fec78c0228320af226a4924310e4dea3 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.9E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 Pfam PF00551 Formyl transferase 3 182 4.5E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 8.3E-83 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 Gene3D G3DSA:3.40.50.170 2 199 5.0E-71 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 32.216 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CO704_RS05160 0ddca68c1f4227036bc595c2c867a431 212 SUPERFAMILY SSF53328 3 201 7.98E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 Gene3D G3DSA:3.40.50.10490 1 209 5.1E-32 T 28-03-2018 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 Gene3D G3DSA:3.40.50.10490 221 374 4.0E-18 T 28-03-2018 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 Pfam PF01380 SIS domain 225 355 1.3E-14 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 Pfam PF01380 SIS domain 49 188 2.8E-26 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 SUPERFAMILY SSF53697 15 374 5.62E-55 T 28-03-2018 CO704_RS21125 518bbf7ee58e8e072b12ddb26890f945 385 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 383 1.3E-168 T 28-03-2018 IPR014180 Sugar isomerase, AgaS GO:0016861 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 SUPERFAMILY SSF56796 4 356 9.94E-118 T 28-03-2018 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.262 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 Pfam PF01761 3-dehydroquinate synthase 67 325 2.9E-110 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 354 6.1E-122 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 Gene3D G3DSA:3.40.50.1970 4 172 4.5E-48 T 28-03-2018 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 PIRSF PIRSF001455 15 360 1.0E-106 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CO704_RS00840 3896b7280f68b9097362bd4fa2b94a06 362 Gene3D G3DSA:1.20.1090.10 173 362 1.1E-69 T 28-03-2018 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 SUPERFAMILY SSF48498 78 188 4.79E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 50 3.2E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 Gene3D G3DSA:1.10.10.60 2 55 1.4E-12 T 28-03-2018 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 SUPERFAMILY SSF46689 4 63 7.18E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 Gene3D G3DSA:1.10.357.10 56 193 2.0E-16 T 28-03-2018 CO704_RS12720 4d2baf6c4efe08b03fae80c532d28173 193 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 79 190 5.3E-13 T 28-03-2018 CO704_RS22675 2a8c65bbfe987e3c3ad619789543aafb 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 8 165 26.611 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CO704_RS22675 2a8c65bbfe987e3c3ad619789543aafb 169 Pfam PF04345 Chorismate lyase 21 168 2.4E-35 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CO704_RS22675 2a8c65bbfe987e3c3ad619789543aafb 169 SUPERFAMILY SSF64288 16 165 7.2E-48 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS22675 2a8c65bbfe987e3c3ad619789543aafb 169 Gene3D G3DSA:3.40.1410.10 3 165 4.8E-46 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 Pfam PF13662 Toprim domain 82 172 2.2E-23 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 Pfam PF02132 RecR protein 41 77 1.4E-15 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 SUPERFAMILY SSF111304 2 199 6.15E-72 T 28-03-2018 IPR023627 Recombination protein RecR CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 8.4E-82 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.134 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 Gene3D G3DSA:3.40.1360.10 78 171 1.2E-34 T 28-03-2018 CO704_RS05415 276918950cafcf2b0773ab5fd5cbf771 201 SMART SM00493 81 166 2.5E-18 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Gene3D G3DSA:1.20.5.480 257 291 3.1E-22 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Gene3D G3DSA:3.30.70.20 43 113 1.8E-21 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 SUPERFAMILY SSF54862 28 272 3.77E-72 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Gene3D G3DSA:3.30.70.20 153 256 7.7E-23 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 2.7E-22 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Gene3D G3DSA:3.30.70.20 14 42 0.0047 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Gene3D G3DSA:3.30.70.20 114 152 1.7E-16 T 28-03-2018 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.3E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 1.7E-145 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CO704_RS00160 6e3d701986733a5f01a472b185d4c021 300 PIRSF PIRSF036298 1 300 9.7E-166 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 Gene3D G3DSA:1.20.1050.10 91 204 4.1E-25 T 28-03-2018 CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 189 6.9E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 SUPERFAMILY SSF52833 1 84 3.86E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 Gene3D G3DSA:3.40.30.10 1 90 7.6E-33 T 28-03-2018 CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 7.2E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS00940 ac65ecda1595032ff3d7bb94d4f91dc6 205 SUPERFAMILY SSF47616 71 195 1.39E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 SUPERFAMILY SSF46785 5 64 9.44E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Pfam PF05043 Mga helix-turn-helix domain 90 165 2.8E-10 T 28-03-2018 IPR007737 Mga helix-turn-helix domain CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 495 626 4.9E-15 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 SUPERFAMILY SSF52794 400 478 1.62E-7 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:1.10.1790.10 190 279 0.0072 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:1.10.1790.10 280 392 4.1E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:3.40.930.10 490 631 1.4E-20 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 SUPERFAMILY SSF55804 490 627 6.1E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Pfam PF08279 HTH domain 7 63 2.5E-10 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:1.10.10.10 87 152 8.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:1.10.10.10 3 68 2.2E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 SUPERFAMILY SSF63520 294 391 2.49E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Gene3D G3DSA:3.40.50.2300 398 483 2.4E-12 T 28-03-2018 CO704_RS21175 e21768c2e97ee330a75064ac1f1067f4 636 Pfam PF00874 PRD domain 300 386 7.5E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 SUPERFAMILY SSF46785 11 110 1.14E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 Gene3D G3DSA:1.10.10.10 4 83 2.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 Pfam PF03466 LysR substrate binding domain 86 290 4.6E-45 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 63 7.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 SUPERFAMILY SSF53850 88 291 3.62E-48 T 28-03-2018 CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 Gene3D G3DSA:3.40.190.10 84 175 1.1E-18 T 28-03-2018 CO704_RS14185 d3296308d6609064ba0d12758588ea8f 292 Gene3D G3DSA:3.40.190.10 176 260 4.1E-23 T 28-03-2018 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 SMART SM00342 22 105 4.1E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 SUPERFAMILY SSF46689 58 108 1.76E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 5.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 5.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 SUPERFAMILY SSF46689 7 56 4.66E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 Pfam PF12833 Helix-turn-helix domain 28 106 1.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 Gene3D G3DSA:1.10.10.60 60 110 3.4E-12 T 28-03-2018 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 Gene3D G3DSA:1.10.10.60 3 59 3.0E-12 T 28-03-2018 CO704_RS03520 3389a14b1004ba214e5abe1c8716c817 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS22350 5445ac6a2b77a7dbcbfc4afb67d13323 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 276 3.2E-149 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22350 5445ac6a2b77a7dbcbfc4afb67d13323 281 PIRSF PIRSF011468 1 281 4.0E-168 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 Pfam PF01575 MaoC like domain 535 648 2.4E-27 T 28-03-2018 IPR002539 MaoC-like domain CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 674 0.0 T 28-03-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 Gene3D G3DSA:3.40.605.10 1 266 6.0E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 Gene3D G3DSA:3.40.309.10 267 484 4.9E-39 T 28-03-2018 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 Gene3D G3DSA:3.10.129.10 499 673 3.3E-39 T 28-03-2018 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 SUPERFAMILY SSF54637 525 674 2.04E-32 T 28-03-2018 IPR029069 HotDog domain CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 SUPERFAMILY SSF53720 5 500 3.01E-80 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS11825 cb00256b8f361d57a7c55bce6f190928 681 Pfam PF00171 Aldehyde dehydrogenase family 12 496 1.4E-60 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS13710 bcf94890e4519166d977316ba4668657 520 SUPERFAMILY SSF53474 282 516 3.85E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13710 bcf94890e4519166d977316ba4668657 520 Gene3D G3DSA:2.60.40.10 143 262 4.2E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS13710 bcf94890e4519166d977316ba4668657 520 Gene3D G3DSA:3.40.50.1820 272 519 2.9E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13710 bcf94890e4519166d977316ba4668657 520 Pfam PF00756 Putative esterase 297 513 9.1E-23 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CO704_RS13710 bcf94890e4519166d977316ba4668657 520 Pfam PF11806 Domain of unknown function (DUF3327) 172 260 7.4E-17 T 28-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 CO704_RS13710 bcf94890e4519166d977316ba4668657 520 SUPERFAMILY SSF81296 145 270 6.06E-32 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS07520 0c151435b64a2210bbcb4b10bb7a9295 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 425 4.5E-256 T 28-03-2018 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK CO704_RS07520 0c151435b64a2210bbcb4b10bb7a9295 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 5.9E-37 T 28-03-2018 IPR007345 Polysaccharide pyruvyl transferase CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 SUPERFAMILY SSF51338 1 53 4.55E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 Gene3D G3DSA:3.20.20.140 69 350 5.5E-91 T 28-03-2018 CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 1.1E-171 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 PIRSF PIRSF038994 1 382 9.5E-116 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 SUPERFAMILY SSF51556 54 350 1.26E-99 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 Gene3D G3DSA:2.30.40.10 2 68 3.7E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS17100 95af8b018048415d058a6e883ba63c9b 382 Pfam PF01979 Amidohydrolase family 51 379 5.1E-46 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS20460 df0bf666276c1d4671f5d56b753cb9bb 178 Gene3D G3DSA:1.25.40.10 65 113 2.9E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS20460 df0bf666276c1d4671f5d56b753cb9bb 178 SMART SM00028 94 127 0.0018 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS20460 df0bf666276c1d4671f5d56b753cb9bb 178 Gene3D G3DSA:1.25.40.10 114 173 4.3E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS20460 df0bf666276c1d4671f5d56b753cb9bb 178 SUPERFAMILY SSF48452 67 156 5.96E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS20460 df0bf666276c1d4671f5d56b753cb9bb 178 Pfam PF13432 Tetratricopeptide repeat 69 127 2.9E-6 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 SUPERFAMILY SSF51905 3 250 2.89E-73 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 SUPERFAMILY SSF51905 361 420 2.89E-73 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 Gene3D G3DSA:3.50.50.60 2 447 2.1E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 Pfam PF00890 FAD binding domain 7 397 1.2E-114 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 Gene3D G3DSA:1.20.58.100 448 550 3.1E-27 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.0E-247 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 PIRSF PIRSF000171 1 575 6.7E-44 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.4E-5 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.5E-10 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 2.5E-10 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 28-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.1E-39 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 Gene3D G3DSA:4.10.80.40 551 576 5.7E-14 T 28-03-2018 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 SUPERFAMILY SSF46977 444 586 6.93E-47 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21320 9283bb9573fde848e37d8b5edc81f01d 596 SUPERFAMILY SSF56425 227 358 1.24E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS04130 1ddc779b8595c8635c84fbdb25583775 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 17 67 3.6E-16 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 Gene3D G3DSA:3.20.20.140 75 359 5.5E-62 T 28-03-2018 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 SUPERFAMILY SSF51556 60 360 9.67E-88 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 41.491 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 Pfam PF01979 Amidohydrolase family 57 397 1.4E-22 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 397 2.0E-146 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 Gene3D G3DSA:2.30.40.10 1 74 2.7E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 SUPERFAMILY SSF51338 361 399 8.03E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS09390 c69d8bfd3dc38b542a29cbbd9bc36751 402 SUPERFAMILY SSF51338 2 60 8.03E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS05405 b03a546c58226f130e26905f5888c948 301 Gene3D G3DSA:3.40.190.10 179 266 8.4E-22 T 28-03-2018 CO704_RS05405 b03a546c58226f130e26905f5888c948 301 SUPERFAMILY SSF53850 88 298 1.34E-40 T 28-03-2018 CO704_RS05405 b03a546c58226f130e26905f5888c948 301 Pfam PF03466 LysR substrate binding domain 88 294 4.6E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS05405 b03a546c58226f130e26905f5888c948 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05405 b03a546c58226f130e26905f5888c948 301 Gene3D G3DSA:3.40.190.10 88 178 2.4E-12 T 28-03-2018 CO704_RS05405 b03a546c58226f130e26905f5888c948 301 SUPERFAMILY SSF46785 3 88 2.76E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05405 b03a546c58226f130e26905f5888c948 301 Gene3D G3DSA:1.10.10.10 2 84 2.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25745 89b304e0135fa50d8e5f459ec0b90639 227 Gene3D G3DSA:1.10.10.10 150 209 2.9E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25745 89b304e0135fa50d8e5f459ec0b90639 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 202 8.4E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25745 89b304e0135fa50d8e5f459ec0b90639 227 SUPERFAMILY SSF46894 137 209 2.18E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 Gene3D G3DSA:3.40.50.1980 177 299 2.4E-28 T 28-03-2018 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 SUPERFAMILY SSF53807 27 299 1.03E-87 T 28-03-2018 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 264 283 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 61 74 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 30 48 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 185 206 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 74 91 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00690 Adhesin family signature 238 256 2.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 Gene3D G3DSA:3.40.50.1980 22 176 4.3E-44 T 28-03-2018 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 74 93 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 185 202 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 256 274 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 211 229 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 234 251 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 55 73 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 PRINTS PR00691 Adhesin B signature 30 51 1.1E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS22240 3eb26c62d8f79d8d64ce67a95517d52b 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 296 5.2E-72 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CO704_RS11870 cd5612f7e1eee9869fdd0833424b9da7 447 Gene3D G3DSA:1.20.1600.10 17 432 4.1E-62 T 28-03-2018 CO704_RS11870 cd5612f7e1eee9869fdd0833424b9da7 447 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 43 440 4.0E-95 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CO704_RS11870 cd5612f7e1eee9869fdd0833424b9da7 447 Pfam PF02321 Outer membrane efflux protein 51 229 1.8E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS11870 cd5612f7e1eee9869fdd0833424b9da7 447 Pfam PF02321 Outer membrane efflux protein 258 414 2.1E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS11870 cd5612f7e1eee9869fdd0833424b9da7 447 SUPERFAMILY SSF56954 10 427 7.72E-72 T 28-03-2018 CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 SUPERFAMILY SSF49899 330 478 4.11E-25 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 451 1.1E-138 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 357 467 1.2E-19 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 SMART SM00640 28 441 5.5E-149 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 Gene3D G3DSA:2.60.120.560 357 478 2.9E-22 T 28-03-2018 CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 Gene3D G3DSA:2.115.10.20 33 356 1.1E-104 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 SUPERFAMILY SSF75005 21 331 8.17E-110 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 28 41 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CO704_RS05290 8a036451d7b56ace648cf6c069ae5020 480 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 330 1.7E-103 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Pfam PF13538 UvrD-like helicase C-terminal domain 539 585 1.7E-14 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 608 6.4E-192 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 608 52.751 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 SUPERFAMILY SSF52540 5 364 8.53E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 SUPERFAMILY SSF52540 285 382 3.79E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 SUPERFAMILY SSF52540 438 608 3.79E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Gene3D G3DSA:3.40.50.300 115 359 4.1E-65 T 28-03-2018 CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Pfam PF13604 AAA domain 158 336 1.1E-32 T 28-03-2018 CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Gene3D G3DSA:3.40.50.300 475 599 2.2E-24 T 28-03-2018 CO704_RS03400 69b1f7da6ae57ab4141ce2741b93be07 613 Gene3D G3DSA:3.40.50.300 369 474 2.8E-11 T 28-03-2018 CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 78.407 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 372 5.1E-16 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 1.2E-206 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 SUPERFAMILY SSF53335 3 372 1.61E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 Gene3D G3DSA:3.40.50.150 1 373 4.3E-43 T 28-03-2018 CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CO704_RS15845 4fb805ade408bb8f5565b28ff43879ee 375 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 2 367 2.6E-56 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CO704_RS12415 f9b4d5d112f836cd6b42a945b0b987b0 372 Gene3D G3DSA:2.30.300.10 189 345 2.8E-26 T 28-03-2018 CO704_RS12415 f9b4d5d112f836cd6b42a945b0b987b0 372 SUPERFAMILY SSF69279 183 349 5.53E-44 T 28-03-2018 CO704_RS12415 f9b4d5d112f836cd6b42a945b0b987b0 372 PIRSF PIRSF004440 8 371 2.1E-52 T 28-03-2018 IPR026276 Baseplate protein GpP CO704_RS12415 f9b4d5d112f836cd6b42a945b0b987b0 372 Gene3D G3DSA:2.30.300.10 9 188 5.7E-42 T 28-03-2018 CO704_RS12415 f9b4d5d112f836cd6b42a945b0b987b0 372 SUPERFAMILY SSF69279 12 181 8.93E-48 T 28-03-2018 CO704_RS10140 f9b4d5d112f836cd6b42a945b0b987b0 372 Gene3D G3DSA:2.30.300.10 189 345 2.8E-26 T 28-03-2018 CO704_RS10140 f9b4d5d112f836cd6b42a945b0b987b0 372 SUPERFAMILY SSF69279 183 349 5.53E-44 T 28-03-2018 CO704_RS10140 f9b4d5d112f836cd6b42a945b0b987b0 372 PIRSF PIRSF004440 8 371 2.1E-52 T 28-03-2018 IPR026276 Baseplate protein GpP CO704_RS10140 f9b4d5d112f836cd6b42a945b0b987b0 372 Gene3D G3DSA:2.30.300.10 9 188 5.7E-42 T 28-03-2018 CO704_RS10140 f9b4d5d112f836cd6b42a945b0b987b0 372 SUPERFAMILY SSF69279 12 181 8.93E-48 T 28-03-2018 CO704_RS18485 4641b435e24082f27093707b7d081221 472 ProSitePatterns PS00123 Alkaline phosphatase active site. 122 130 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 SUPERFAMILY SSF53649 45 471 1.1E-135 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS18485 4641b435e24082f27093707b7d081221 472 PRINTS PR00113 Alkaline phosphatase signature 65 85 1.4E-50 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 PRINTS PR00113 Alkaline phosphatase signature 122 137 1.4E-50 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 PRINTS PR00113 Alkaline phosphatase signature 321 350 1.4E-50 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 PRINTS PR00113 Alkaline phosphatase signature 159 179 1.4E-50 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 PRINTS PR00113 Alkaline phosphatase signature 222 232 1.4E-50 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 Gene3D G3DSA:3.40.720.10 23 472 5.7E-127 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS18485 4641b435e24082f27093707b7d081221 472 SMART SM00098 66 472 1.7E-211 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 Pfam PF00245 Alkaline phosphatase 65 430 3.8E-127 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS18485 4641b435e24082f27093707b7d081221 472 Pfam PF00245 Alkaline phosphatase 431 470 2.0E-8 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CO704_RS17180 33155de264371ac4766bf2f84304ceac 513 Gene3D G3DSA:3.60.110.10 219 484 1.0E-35 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS17180 33155de264371ac4766bf2f84304ceac 513 SUPERFAMILY SSF56317 217 490 3.14E-36 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS17180 33155de264371ac4766bf2f84304ceac 513 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 23.867 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CO704_RS17180 33155de264371ac4766bf2f84304ceac 513 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 4.0E-37 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS17180 33155de264371ac4766bf2f84304ceac 513 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 457 1.9E-115 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 Gene3D G3DSA:2.40.50.100 203 430 3.3E-8 T 28-03-2018 CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 315 3.0E-63 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 SUPERFAMILY SSF111369 130 321 3.66E-14 T 28-03-2018 CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 207 391 7.1E-36 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 Gene3D G3DSA:2.40.50.100 123 202 1.3E-4 T 28-03-2018 CO704_RS17315 f42633c537537bf71f6d56fa90215e29 488 Pfam PF11604 Copper binding periplasmic protein CusF 420 481 4.6E-18 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF CO704_RS21920 b058f8a4c16d942a7f2f49b917c7d9e2 118 Pfam PF11990 Protein of unknown function (DUF3487) 2 114 2.0E-41 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 CO704_RS21920 b058f8a4c16d942a7f2f49b917c7d9e2 118 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 113 1.6E-41 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 Gene3D G3DSA:3.40.50.150 21 266 2.2E-82 T 28-03-2018 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 131 256 1.5E-49 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 19 669 28.081 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 Pfam PF01266 FAD dependent oxidoreductase 279 644 2.4E-47 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 SUPERFAMILY SSF51905 583 671 9.5E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 SUPERFAMILY SSF51905 280 490 9.5E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 279 674 2.6E-156 T 28-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CO704_RS06315 0e437d266500a23a1b6fa9b4f85a4205 678 Gene3D G3DSA:3.50.50.60 267 678 1.5E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.3E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 SMART SM01134 72 233 7.7E-73 T 28-03-2018 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 SUPERFAMILY SSF100950 73 233 1.33E-37 T 28-03-2018 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 Gene3D G3DSA:1.10.10.10 1 61 5.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 SUPERFAMILY SSF46785 4 60 1.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.8E-52 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 Gene3D G3DSA:3.40.50.1360 72 239 1.1E-39 T 28-03-2018 CO704_RS03795 dbe40879a623db9a5d0e783269abe35c 261 SMART SM00420 6 58 4.0E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 SUPERFAMILY SSF53098 9 473 7.59E-137 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 PIRSF PIRSF000977 3 474 3.2E-199 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 Pfam PF08411 Exonuclease C-terminal 211 471 2.4E-104 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 Gene3D G3DSA:3.30.420.10 1 200 2.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 SMART SM00479 9 202 0.0031 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS07720 a4cb4bdbdbecfa3b3d15f24d8c798569 475 Pfam PF00929 Exonuclease 12 191 1.5E-28 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS19220 c1582d937c147a040006486895d9f99d 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 3.0E-22 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS19220 c1582d937c147a040006486895d9f99d 129 Gene3D G3DSA:3.10.180.10 1 129 1.5E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS19220 c1582d937c147a040006486895d9f99d 129 SUPERFAMILY SSF54593 3 128 2.82E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 Gene3D G3DSA:3.40.50.720 1 260 5.8E-82 T 28-03-2018 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 7 166 4.0E-31 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 SUPERFAMILY SSF51735 6 260 1.3E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 SUPERFAMILY SSF48179 263 451 6.8E-43 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 197 434 1.2E-71 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 9.9E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 9.9E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 9.9E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 9.9E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06415 a91a2e639c56b6d20fd16c8a322be2aa 464 Gene3D G3DSA:1.10.1040.10 261 463 1.3E-49 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS00730 a688a3b9b82aa89133ca61ae35bbda3d 78 Gene3D G3DSA:1.10.10.10 1 76 4.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00730 a688a3b9b82aa89133ca61ae35bbda3d 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.201 T 28-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CO704_RS00730 a688a3b9b82aa89133ca61ae35bbda3d 78 Pfam PF09012 FeoC like transcriptional regulator 3 70 1.4E-15 T 28-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CO704_RS00730 a688a3b9b82aa89133ca61ae35bbda3d 78 SUPERFAMILY SSF46785 1 76 1.84E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 1.2E-24 T 28-03-2018 CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 Gene3D G3DSA:3.40.50.1000 171 316 2.8E-27 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 SUPERFAMILY SSF56784 109 317 4.46E-49 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 Gene3D G3DSA:1.10.150.210 124 170 1.4E-23 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 1.4E-89 T 28-03-2018 CO704_RS20070 9dc1cfbc92fc5872f3f42624ce6f17ee 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 117 280 2.0E-18 T 28-03-2018 CO704_RS19865 bf7cd2294d61dab706e1189c1b251c7c 316 Pfam PF02401 LytB protein 3 282 2.9E-92 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CO704_RS19865 bf7cd2294d61dab706e1189c1b251c7c 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.153 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CO704_RS19865 bf7cd2294d61dab706e1189c1b251c7c 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 5.1E-100 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 SMART SM00895 97 220 1.4E-16 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 Gene3D G3DSA:1.20.120.530 83 229 1.5E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 Gene3D G3DSA:1.10.10.10 2 70 1.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 Pfam PF07729 FCD domain 99 218 2.2E-23 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 SMART SM00345 9 68 3.7E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 SUPERFAMILY SSF48008 98 227 1.05E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS24725 6435020a7b05907572e54aca6d98907a 229 SUPERFAMILY SSF46785 4 72 1.46E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 2.0E-35 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 SUPERFAMILY SSF56214 3 125 1.16E-28 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.3E-56 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 Gene3D G3DSA:3.90.470.20 1 126 2.9E-37 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 1.3E-38 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.154 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CO704_RS04630 56f7a2eae6a1f6eb92d03a702b939642 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 3.3E-24 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 SMART SM00842 10 196 2.0E-96 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.29 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.8E-160 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Gene3D G3DSA:3.30.420.40 197 247 4.3E-6 T 28-03-2018 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 SUPERFAMILY SSF53067 198 384 2.45E-45 T 28-03-2018 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 SUPERFAMILY SSF53067 8 221 1.36E-61 T 28-03-2018 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Gene3D G3DSA:3.90.640.10 248 300 2.6E-19 T 28-03-2018 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 5.2E-30 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 PIRSF PIRSF003101 2 418 4.4E-152 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Gene3D G3DSA:3.30.420.40 2 186 1.2E-34 T 28-03-2018 CO704_RS19620 90b03d8a9ea42d279690e4c3a6d10200 418 Pfam PF14450 Cell division protein FtsA 207 381 1.4E-23 T 28-03-2018 CO704_RS08205 a7b469106bd2a224c8412ac198fe98f5 111 Pfam PF00893 Small Multidrug Resistance protein 4 95 7.8E-25 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS08205 a7b469106bd2a224c8412ac198fe98f5 111 SUPERFAMILY SSF103481 8 107 2.48E-18 T 28-03-2018 CO704_RS00215 b813d6ec2a38c8e3fe7b3530fcac3a71 199 Pfam PF02525 Flavodoxin-like fold 6 174 5.5E-33 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS00215 b813d6ec2a38c8e3fe7b3530fcac3a71 199 SUPERFAMILY SSF52218 7 193 3.73E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS00215 b813d6ec2a38c8e3fe7b3530fcac3a71 199 Gene3D G3DSA:3.40.50.360 5 199 2.6E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS00330 dc4157e98a43548f47ad1a29c591eabb 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 9.4E-117 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CO704_RS00330 dc4157e98a43548f47ad1a29c591eabb 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS00330 dc4157e98a43548f47ad1a29c591eabb 280 SUPERFAMILY SSF53335 9 279 7.25E-100 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS00330 dc4157e98a43548f47ad1a29c591eabb 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.106 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CO704_RS00330 dc4157e98a43548f47ad1a29c591eabb 280 Gene3D G3DSA:3.40.50.150 1 280 1.2E-93 T 28-03-2018 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 Gene3D G3DSA:3.20.20.80 4 398 8.4E-67 T 28-03-2018 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 PIRSF PIRSF001021 1 494 1.0E-204 T 28-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 Gene3D G3DSA:2.60.40.1180 407 495 1.8E-32 T 28-03-2018 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 SUPERFAMILY SSF51445 7 404 2.48E-84 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 SUPERFAMILY SSF51011 405 491 2.82E-29 T 28-03-2018 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 SMART SM00642 4 402 1.4E-51 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 Pfam PF09154 Domain of unknown function (DUF1939) 444 489 2.4E-4 T 28-03-2018 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 CO704_RS08470 4a8ef388165d98cbc391c5ed03b9d0f6 495 Pfam PF00128 Alpha amylase, catalytic domain 31 367 4.7E-20 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Pfam PF01568 Molydopterin dinucleotide binding domain 1089 1203 1.7E-20 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 SUPERFAMILY SSF53706 4 1071 0.0 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1236 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 778 795 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 SUPERFAMILY SSF50692 1081 1236 3.62E-45 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:3.40.50.740 612 853 6.0E-34 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Pfam PF00384 Molybdopterin oxidoreductase 108 834 4.7E-179 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:2.40.40.20 1049 1239 2.9E-45 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:4.10.1200.10 1 26 2.8E-14 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 SMART SM00926 43 105 5.5E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:2.20.25.90 55 98 8.5E-28 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.0E-15 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:3.40.50.740 108 212 6.6E-5 T 28-03-2018 CO704_RS09740 4f768eca20fc36fdb3d928a9fa294a50 1248 Gene3D G3DSA:3.40.228.10 224 611 1.7E-89 T 28-03-2018 CO704_RS12120 9a6839c4e1effbf27bc00939bc7f8281 295 SUPERFAMILY SSF51735 1 290 3.13E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12120 9a6839c4e1effbf27bc00939bc7f8281 295 Gene3D G3DSA:3.40.50.720 1 93 3.3E-18 T 28-03-2018 CO704_RS12120 9a6839c4e1effbf27bc00939bc7f8281 295 Gene3D G3DSA:3.90.25.10 158 292 2.4E-15 T 28-03-2018 CO704_RS12120 9a6839c4e1effbf27bc00939bc7f8281 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 218 2.2E-15 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS13755 04586131efd2f50c2d7ce02d26d87030 259 Gene3D G3DSA:3.40.50.300 1 244 5.0E-61 T 28-03-2018 CO704_RS13755 04586131efd2f50c2d7ce02d26d87030 259 Pfam PF00005 ABC transporter 21 168 5.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS13755 04586131efd2f50c2d7ce02d26d87030 259 SMART SM00382 29 218 3.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS13755 04586131efd2f50c2d7ce02d26d87030 259 SUPERFAMILY SSF52540 4 237 4.57E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13755 04586131efd2f50c2d7ce02d26d87030 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Gene3D G3DSA:1.10.340.30 21 117 3.6E-23 T 28-03-2018 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 9.4E-19 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 SMART SM00525 186 206 4.4E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.908 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.4E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 PIRSF PIRSF001435 1 210 2.0E-49 T 28-03-2018 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 SUPERFAMILY SSF48150 4 208 4.08E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 Gene3D G3DSA:1.10.1670.10 118 211 4.2E-29 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.6E-88 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CO704_RS13385 5d5ec549852087fe527a243796fb63bf 211 SMART SM00478 38 185 2.9E-51 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 5.5E-240 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 300 3.6E-81 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.5E-82 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 PIRSF PIRSF001492 1 515 3.7E-204 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 Gene3D G3DSA:3.40.1450.10 79 304 2.8E-93 T 28-03-2018 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 Gene3D G3DSA:3.40.720.10 305 514 7.7E-37 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.944 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 SUPERFAMILY SSF53649 5 79 1.14E-72 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 SUPERFAMILY SSF53649 312 511 1.14E-72 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS23720 84b9dec1219b339b48a71cc3d7feef3a 515 SUPERFAMILY SSF64158 79 311 6.8E-85 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 1.4E-74 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 SUPERFAMILY SSF81338 11 259 5.1E-79 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 Pfam PF00230 Major intrinsic protein 6 253 6.5E-73 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 236 256 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.1E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 Gene3D G3DSA:1.20.1080.10 3 261 5.8E-79 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS23620 c471b055752ef5c6e82bd5c59d0fa118 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS07490 06bf534f45fa90c4c999c99125670441 159 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS07490 06bf534f45fa90c4c999c99125670441 159 PIRSF PIRSF037599 1 152 1.3E-71 T 28-03-2018 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 CO704_RS07490 06bf534f45fa90c4c999c99125670441 159 SUPERFAMILY SSF55811 3 147 2.3E-27 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS07490 06bf534f45fa90c4c999c99125670441 159 Pfam PF00293 NUDIX domain 20 143 5.4E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS07490 06bf534f45fa90c4c999c99125670441 159 Gene3D G3DSA:3.90.79.10 1 159 2.5E-25 T 28-03-2018 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PIRSF PIRSF038928 1 481 3.4E-219 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 SUPERFAMILY SSF56634 4 476 5.1E-213 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 SMART SM01060 7 391 1.5E-285 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 Pfam PF00199 Catalase 7 388 3.0E-189 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 Pfam PF06628 Catalase-related immune-responsive 415 475 2.0E-22 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 Gene3D G3DSA:2.40.180.10 1 357 1.1E-159 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 83 101 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 104 121 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 320 346 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 20 43 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 123 141 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS06660 93aa17e4abe254e5975b73f8ef82d5c9 482 PRINTS PR00067 Catalase signature 288 315 1.8E-70 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.3E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 SUPERFAMILY SSF51735 6 243 1.01E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 Pfam PF00106 short chain dehydrogenase 6 194 3.0E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS09630 7931f033ecc38dee8f9a51ff2a4da4b4 246 Gene3D G3DSA:3.40.50.720 4 245 1.2E-58 T 28-03-2018 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 SUPERFAMILY SSF50814 11 176 9.35E-48 T 28-03-2018 IPR012674 Calycin CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 3.5E-43 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 28-03-2018 IPR022272 Lipocalin family conserved site CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 Gene3D G3DSA:2.40.128.20 2 177 3.2E-45 T 28-03-2018 IPR012674 Calycin CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 Pfam PF08212 Lipocalin-like domain 35 174 1.2E-42 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CO704_RS21350 c44463f93e1bd99ab13eb7458e3926d1 177 PIRSF PIRSF036893 1 177 3.4E-46 T 28-03-2018 IPR022271 Lipocalin, ApoD type CO704_RS02665 382dcf8b16767605efc4a550871d9813 398 Pfam PF00155 Aminotransferase class I and II 31 379 4.5E-62 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS02665 382dcf8b16767605efc4a550871d9813 398 SUPERFAMILY SSF53383 3 395 1.67E-103 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS02665 382dcf8b16767605efc4a550871d9813 398 Gene3D G3DSA:3.90.1150.10 275 398 2.1E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS02665 382dcf8b16767605efc4a550871d9813 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CO704_RS02665 382dcf8b16767605efc4a550871d9813 398 Gene3D G3DSA:3.40.640.10 40 274 3.0E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 236.399 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 Pfam PF00583 Acetyltransferase (GNAT) family 337 413 2.1E-6 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 Gene3D G3DSA:3.40.1160.10 7 294 2.5E-55 T 28-03-2018 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 3.3E-198 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 SUPERFAMILY SSF53633 5 291 1.14E-69 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS03405 2d13de45f332b7324757f394e03564de 443 Gene3D G3DSA:3.40.630.30 297 442 7.3E-20 T 28-03-2018 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 SUPERFAMILY SSF55729 268 418 2.66E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS03405 2d13de45f332b7324757f394e03564de 443 PIRSF PIRSF000423 1 442 4.9E-209 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CO704_RS03405 2d13de45f332b7324757f394e03564de 443 Pfam PF00696 Amino acid kinase family 26 267 4.4E-30 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 Gene3D G3DSA:3.30.470.10 1 142 1.6E-43 T 28-03-2018 CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.8E-143 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 Pfam PF01063 Amino-transferase class IV 36 268 3.7E-49 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 SUPERFAMILY SSF56752 7 307 3.14E-105 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 Gene3D G3DSA:3.20.10.10 143 303 7.9E-50 T 28-03-2018 CO704_RS23415 214e85eed0e0f3a12ad14f90da4dad59 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 Pfam PF00005 ABC transporter 25 182 7.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 8.3E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 317 8.0E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 Gene3D G3DSA:3.40.50.300 1 325 1.9E-79 T 28-03-2018 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 SMART SM00382 33 233 1.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08665 4ca9720728f998819ad624259c75ea3d 325 SUPERFAMILY SSF52540 32 307 1.54E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 460 1.3E-132 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 PRINTS PR01780 Lantibiotic regulatory protein signature 348 363 4.3E-6 T 28-03-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 PRINTS PR01780 Lantibiotic regulatory protein signature 252 268 4.3E-6 T 28-03-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 PRINTS PR01780 Lantibiotic regulatory protein signature 412 427 4.3E-6 T 28-03-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 SMART SM00387 352 463 6.8E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 Gene3D G3DSA:1.10.287.130 233 305 6.9E-12 T 28-03-2018 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 Gene3D G3DSA:3.30.565.10 313 463 2.9E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 Pfam PF00672 HAMP domain 189 239 3.3E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 8.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 461 2.8E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 SUPERFAMILY SSF55874 298 460 1.57E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 SMART SM00388 243 309 3.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 SMART SM00304 189 242 7.8E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS11220 760c4ef0bc038b170a37fc7e315a869b 463 SUPERFAMILY SSF47384 226 309 1.63E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 Gene3D G3DSA:3.40.50.2300 182 325 1.6E-29 T 28-03-2018 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 SMART SM00354 7 77 1.3E-31 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 Gene3D G3DSA:3.40.50.2300 60 181 3.2E-33 T 28-03-2018 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 SUPERFAMILY SSF53822 64 339 1.85E-53 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 28-03-2018 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 66 327 1.8E-72 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 4.7E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 SUPERFAMILY SSF47413 6 65 2.23E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS13285 8dda6e33c1424b0509264e2cf2bd92bb 344 Gene3D G3DSA:1.10.260.40 6 59 1.3E-19 T 28-03-2018 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 2.9E-17 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 2.9E-17 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 2.9E-17 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 2.4E-29 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 3.8E-27 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS08445 8f1c1e7f7dbf56705de6126582f7caa8 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 104 17.463 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS12975 8fa676529d4d2c9305d7f94a6673db87 341 Pfam PF00419 Fimbrial protein 200 341 6.4E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS12975 8fa676529d4d2c9305d7f94a6673db87 341 Gene3D G3DSA:2.60.40.1090 197 341 2.1E-31 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS12975 8fa676529d4d2c9305d7f94a6673db87 341 SUPERFAMILY SSF49401 205 341 8.45E-25 T 28-03-2018 IPR008966 Adhesion domain CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 48.417 T 28-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 30 284 4.1E-87 T 28-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 PIRSF PIRSF006334 14 294 1.0E-102 T 28-03-2018 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 2.6E-42 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 63 140 1.2E-11 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 SUPERFAMILY SSF53927 152 290 2.68E-41 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 SUPERFAMILY SSF53927 1 149 5.69E-39 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 Gene3D G3DSA:3.40.140.10 180 294 2.3E-17 T 28-03-2018 CO704_RS07065 2011fad4b70c5be7d48528a762b55c3b 295 Gene3D G3DSA:3.40.140.10 42 171 1.6E-25 T 28-03-2018 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.029 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 SUPERFAMILY SSF46946 2 114 2.19E-46 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.0E-35 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 Gene3D G3DSA:1.10.8.50 1 66 1.1E-21 T 28-03-2018 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 7.5E-54 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 PIRSF PIRSF002134 1 118 2.6E-42 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 Gene3D G3DSA:4.10.910.10 85 118 1.4E-26 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01205 418d5f652598d83dfd00eecd8c016e3b 118 Gene3D G3DSA:4.10.910.10 67 84 1.5E-18 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 SUPERFAMILY SSF52540 4 171 2.13E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Gene3D G3DSA:1.20.120.430 2 66 3.3E-15 T 28-03-2018 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Gene3D G3DSA:1.20.120.430 280 392 2.3E-15 T 28-03-2018 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Gene3D G3DSA:1.20.120.430 67 279 3.2E-48 T 28-03-2018 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Gene3D G3DSA:3.30.300.20 393 470 7.2E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS05005 53979274a61331732d832a34df8a17d3 501 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 469 5.7E-180 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 389 469 1.5E-26 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Hamap MF_00195 GTPase Der [der]. 2 472 39.709 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Pfam PF01926 50S ribosome-binding GTPase 216 333 8.9E-25 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.9E-28 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.5E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.5E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 SUPERFAMILY SSF52540 188 475 1.0E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05005 53979274a61331732d832a34df8a17d3 501 PIRSF PIRSF006485 1 477 1.6E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 213 379 4.3E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS05005 53979274a61331732d832a34df8a17d3 501 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.5E-21 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS06435 0e828b2cc252e0a0ea3645fce0287de4 122 TIGRFAM TIGR00526 folB_dom: FolB domain 9 122 4.6E-36 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS06435 0e828b2cc252e0a0ea3645fce0287de4 122 Pfam PF02152 Dihydroneopterin aldolase 10 118 1.5E-24 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS06435 0e828b2cc252e0a0ea3645fce0287de4 122 SUPERFAMILY SSF55620 8 122 2.11E-30 T 28-03-2018 CO704_RS06435 0e828b2cc252e0a0ea3645fce0287de4 122 SMART SM00905 10 120 1.1E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CO704_RS06435 0e828b2cc252e0a0ea3645fce0287de4 122 Gene3D G3DSA:3.30.1130.10 3 122 2.5E-29 T 28-03-2018 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 Pfam PF00924 Mechanosensitive ion channel 890 1089 3.1E-60 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 SUPERFAMILY SSF82861 848 931 3.27E-9 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 SUPERFAMILY SSF82689 1001 1100 6.28E-27 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 SUPERFAMILY SSF50182 933 998 3.92E-16 T 28-03-2018 IPR010920 LSM domain CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 Gene3D G3DSA:3.30.70.100 1000 1094 6.1E-21 T 28-03-2018 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 Pfam PF12795 Mechanosensitive ion channel porin domain 51 292 2.0E-61 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 512 829 1.9E-90 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 962 996 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CO704_RS05370 42482db2f4ea93870ef73db3a6632ab2 1124 Gene3D G3DSA:2.30.30.60 949 999 2.7E-12 T 28-03-2018 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.4E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.4E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.3E-34 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.425 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 SUPERFAMILY SSF143800 1 66 2.75E-27 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23570 f58d4c7032f0c526e35e9055291d8e20 71 Pfam PF01197 Ribosomal protein L31 1 64 3.2E-30 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS12850 b32e6416bb435c6dc13fcb337e3d3d7c 442 Gene3D G3DSA:3.90.550.10 53 334 3.8E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS12850 b32e6416bb435c6dc13fcb337e3d3d7c 442 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 4.7E-190 T 28-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 CO704_RS12850 b32e6416bb435c6dc13fcb337e3d3d7c 442 Pfam PF13641 Glycosyltransferase like family 2 77 297 1.5E-37 T 28-03-2018 CO704_RS12850 b32e6416bb435c6dc13fcb337e3d3d7c 442 SUPERFAMILY SSF53448 61 338 2.19E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Gene3D G3DSA:2.60.260.20 253 362 4.8E-27 T 28-03-2018 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SMART SM00271 4 62 9.0E-31 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.737 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 PRINTS PR00625 DnaJ domain signature 42 62 5.5E-33 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 PRINTS PR00625 DnaJ domain signature 25 40 5.5E-33 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 PRINTS PR00625 DnaJ domain signature 62 81 5.5E-33 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 PRINTS PR00625 DnaJ domain signature 7 25 5.5E-33 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 2.1E-143 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SUPERFAMILY SSF49493 113 167 7.72E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SUPERFAMILY SSF49493 211 261 7.72E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Gene3D G3DSA:1.10.287.110 1 112 4.2E-37 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Gene3D G3DSA:2.60.260.20 169 252 4.0E-18 T 28-03-2018 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SUPERFAMILY SSF49493 257 342 1.7E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Gene3D G3DSA:2.60.260.20 113 168 2.3E-15 T 28-03-2018 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SUPERFAMILY SSF46565 1 107 6.41E-36 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 SUPERFAMILY SSF57938 132 209 9.55E-24 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Pfam PF00684 DnaJ central domain 145 205 9.5E-16 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Pfam PF01556 DnaJ C terminal domain 119 331 2.0E-46 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 Pfam PF00226 DnaJ domain 5 67 4.5E-28 T 28-03-2018 IPR001623 DnaJ domain CO704_RS19910 4d09c78b6283012d32618a4a103f215b 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-58 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 PIRSF PIRSF006246 1 125 1.7E-51 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.261 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.3E-48 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.4E-63 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 Gene3D G3DSA:2.40.40.20 1 117 2.2E-52 T 28-03-2018 CO704_RS19450 c5b88b68e041433bec30772521a0dab8 126 SUPERFAMILY SSF50692 1 116 4.35E-48 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS02325 c8d84c222e35ae3f44cedb7fc3871a67 255 SUPERFAMILY SSF52540 1 213 2.21E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02325 c8d84c222e35ae3f44cedb7fc3871a67 255 Gene3D G3DSA:3.40.50.300 1 220 1.9E-61 T 28-03-2018 CO704_RS02325 c8d84c222e35ae3f44cedb7fc3871a67 255 SMART SM00382 26 205 3.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02325 c8d84c222e35ae3f44cedb7fc3871a67 255 Pfam PF00005 ABC transporter 17 156 3.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02325 c8d84c222e35ae3f44cedb7fc3871a67 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.975 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 SUPERFAMILY SSF55811 6 152 6.91E-33 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 Gene3D G3DSA:3.90.79.10 1 163 4.4E-35 T 28-03-2018 CO704_RS03345 3a522c9339572af96a8b938248457b3d 176 Pfam PF00293 NUDIX domain 7 146 2.1E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS19040 073b355d0adf2a40cecc584f15cd1832 318 SUPERFAMILY SSF88713 15 315 7.51E-87 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS19040 073b355d0adf2a40cecc584f15cd1832 318 Gene3D G3DSA:3.20.20.370 12 318 1.9E-58 T 28-03-2018 CO704_RS19040 073b355d0adf2a40cecc584f15cd1832 318 Pfam PF01522 Polysaccharide deacetylase 86 174 3.7E-8 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CO704_RS19040 073b355d0adf2a40cecc584f15cd1832 318 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 16 315 6.1E-158 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 CO704_RS20510 18137da23dd69b8c6bb0821c1b1a5e2f 291 PIRSF PIRSF015582 1 291 2.1E-77 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like CO704_RS20510 18137da23dd69b8c6bb0821c1b1a5e2f 291 Gene3D G3DSA:3.20.20.360 2 263 4.7E-48 T 28-03-2018 CO704_RS20510 18137da23dd69b8c6bb0821c1b1a5e2f 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 289 5.9E-142 T 28-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CO704_RS20510 18137da23dd69b8c6bb0821c1b1a5e2f 291 SUPERFAMILY SSF51621 3 234 2.48E-60 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS20510 18137da23dd69b8c6bb0821c1b1a5e2f 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 5.5E-76 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CO704_RS18035 3c36f3c9929a714d058a4fff82500dd5 272 SUPERFAMILY SSF55729 18 146 1.4E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS18035 3c36f3c9929a714d058a4fff82500dd5 272 Gene3D G3DSA:3.40.630.30 16 168 8.6E-21 T 28-03-2018 CO704_RS18035 3c36f3c9929a714d058a4fff82500dd5 272 Gene3D G3DSA:3.40.630.30 184 254 0.0027 T 28-03-2018 CO704_RS18035 3c36f3c9929a714d058a4fff82500dd5 272 Pfam PF00583 Acetyltransferase (GNAT) family 35 132 8.9E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS17935 db996be2c374df1e4f290fd30f1e6cf4 331 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 329 4.3E-134 T 28-03-2018 IPR013399 CRISPR-associated protein Csy3 CO704_RS17935 db996be2c374df1e4f290fd30f1e6cf4 331 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 9 327 2.9E-145 T 28-03-2018 IPR013399 CRISPR-associated protein Csy3 CO704_RS09505 1f2928bc9a65a5414b1db67876a585cf 223 Gene3D G3DSA:3.50.30.40 11 192 2.2E-48 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS09505 1f2928bc9a65a5414b1db67876a585cf 223 SUPERFAMILY SSF89562 15 183 4.06E-39 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS09505 1f2928bc9a65a5414b1db67876a585cf 223 Pfam PF03737 Aldolase/RraA 18 172 6.7E-35 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:1.25.40.10 252 340 3.1E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Pfam PF13432 Tetratricopeptide repeat 348 412 1.3E-4 T 28-03-2018 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Pfam PF13432 Tetratricopeptide repeat 275 325 4.5E-7 T 28-03-2018 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 919 1271 1.2E-132 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:1.25.40.10 29 117 4.7E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:1.25.40.10 346 565 3.4E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:1.25.20.10 118 251 1.7E-6 T 28-03-2018 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 474 519 1.84E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 270 333 1.84E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 381 446 1.84E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SMART SM00028 298 331 2.7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SMART SM00028 35 68 58.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SMART SM00028 779 812 230.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SMART SM00028 379 412 12.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SMART SM00028 457 490 210.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:2.40.160.20 992 1269 3.5E-6 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Pfam PF14559 Tetratricopeptide repeat 468 517 7.7E-7 T 28-03-2018 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 219 327 1.66E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 178 186 1.66E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 36 142 1.66E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 Gene3D G3DSA:1.25.40.10 570 852 1.4E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 693 768 3.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 SUPERFAMILY SSF48452 575 625 3.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 1176 1197 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 1136 1160 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 153 165 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 43 63 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 490 510 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS24445 15fbeb2262aacb2c6d96b15b8764f164 1274 PRINTS PR01441 Cellulose synthase subunit C signature 183 200 2.6E-26 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CO704_RS07575 5f8ad61228398948ef9790f5a50dc762 234 SUPERFAMILY SSF53448 1 226 2.03E-54 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07575 5f8ad61228398948ef9790f5a50dc762 234 Gene3D G3DSA:3.90.550.10 1 230 1.9E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07575 5f8ad61228398948ef9790f5a50dc762 234 Pfam PF02348 Cytidylyltransferase 4 124 1.1E-18 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 Gene3D G3DSA:3.40.190.10 188 269 8.3E-8 T 28-03-2018 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 SUPERFAMILY SSF53850 99 295 8.69E-29 T 28-03-2018 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 Gene3D G3DSA:3.40.190.10 98 187 6.5E-13 T 28-03-2018 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 SUPERFAMILY SSF46785 2 116 3.98E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 Gene3D G3DSA:1.10.10.10 5 89 2.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02920 351b718cfd91a352ec769d01d2a5aaa8 312 Pfam PF03466 LysR substrate binding domain 99 295 1.2E-30 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 Gene3D G3DSA:3.40.190.10 92 176 2.8E-17 T 28-03-2018 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 SUPERFAMILY SSF53850 93 296 3.41E-42 T 28-03-2018 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 Pfam PF03466 LysR substrate binding domain 91 292 1.0E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 SUPERFAMILY SSF46785 3 87 6.09E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 Gene3D G3DSA:1.10.10.10 4 91 1.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03455 eeb905ac74f65b42c71fa43bcf6fa244 305 Gene3D G3DSA:3.40.190.10 177 263 1.0E-23 T 28-03-2018 CO704_RS25120 6d70cb935cb3b6bdc35be4ed30c3cbfa 417 Gene3D G3DSA:3.40.390.10 169 369 4.4E-5 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CO704_RS25120 6d70cb935cb3b6bdc35be4ed30c3cbfa 417 SUPERFAMILY SSF55486 247 368 2.78E-6 T 28-03-2018 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 61 76 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.1E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Gene3D G3DSA:1.10.287.950 330 517 8.5E-48 T 28-03-2018 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Pfam PF00672 HAMP domain 217 265 1.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 SUPERFAMILY SSF47170 27 151 1.02E-7 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Gene3D G3DSA:1.10.287.1060 244 329 0.056 T 28-03-2018 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 482 3.7E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 SMART SM00283 269 516 1.3E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Gene3D G3DSA:1.20.120.30 23 188 1.2E-25 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 Pfam PF02203 Tar ligand binding domain homologue 1 170 2.9E-18 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 SMART SM00304 216 268 1.5E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS20735 242df698d1d6331c84cae446ab4a6dc9 517 SUPERFAMILY SSF58104 236 517 3.4E-71 T 28-03-2018 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 436 4.5E-262 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 PIRSF PIRSF000429 9 436 1.0E-123 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 Gene3D G3DSA:3.40.47.10 302 433 1.9E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 5.6E-60 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 72.361 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 4.0E-134 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 SUPERFAMILY SSF53901 296 435 8.17E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 SUPERFAMILY SSF53901 15 295 4.51E-62 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 Gene3D G3DSA:3.40.47.10 7 301 1.3E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06265 29e0846515ac9f970d73c3218baf2c03 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 6.4E-37 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.5E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 Pfam PF07729 FCD domain 100 226 5.8E-25 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 Gene3D G3DSA:1.20.120.530 82 248 1.0E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 SMART SM00345 12 71 2.0E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 SMART SM00895 100 228 8.2E-23 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 Gene3D G3DSA:1.10.10.10 1 79 2.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 SUPERFAMILY SSF46785 7 75 5.53E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17990 ec9c38b8d4a363e9c342c93a496b9f92 262 SUPERFAMILY SSF48008 99 233 1.44E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS15380 6211d25126d4c24ddb42d0dd060005cb 150 Pfam PF06303 MatP N-terminal domain 2 85 4.6E-44 T 28-03-2018 IPR035087 MatP, N-terminal CO704_RS15380 6211d25126d4c24ddb42d0dd060005cb 150 Gene3D G3DSA:1.10.3990.20 77 139 1.8E-4 T 28-03-2018 CO704_RS15380 6211d25126d4c24ddb42d0dd060005cb 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.193 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CO704_RS15380 6211d25126d4c24ddb42d0dd060005cb 150 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 3.6E-30 T 28-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CO704_RS15380 6211d25126d4c24ddb42d0dd060005cb 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 1.0E-64 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CO704_RS20915 6de446c0c683e664cb0e59886d005fec 109 Gene3D G3DSA:3.30.1660.10 43 108 3.8E-16 T 28-03-2018 IPR025543 Dodecin-like CO704_RS20915 6de446c0c683e664cb0e59886d005fec 109 SUPERFAMILY SSF159871 13 108 2.62E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS20915 6de446c0c683e664cb0e59886d005fec 109 Pfam PF07338 Protein of unknown function (DUF1471) 54 108 8.4E-15 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.1E-39 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 PIRSF PIRSF004555 3 109 4.2E-38 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 5.7E-34 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 22.854 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 SUPERFAMILY SSF82607 11 103 7.19E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS05400 0a2a8dcc4a95061bd77c17df0a2fe2a1 109 Gene3D G3DSA:3.30.1310.10 1 109 1.9E-44 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 Gene3D G3DSA:3.40.50.10860 11 140 4.3E-50 T 28-03-2018 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 SUPERFAMILY SSF53223 3 122 1.15E-40 T 28-03-2018 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.813 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 9.5E-40 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 Gene3D G3DSA:3.40.50.720 141 264 7.3E-39 T 28-03-2018 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 SUPERFAMILY SSF51735 123 285 4.86E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.5E-87 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.5E-68 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS17605 1032c7304e5f1d816a0b1724dc629fe1 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CO704_RS01995 406e5729307335060a649166c5014161 142 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.5E-34 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CO704_RS01995 406e5729307335060a649166c5014161 142 PIRSF PIRSF018193 1 142 1.0E-65 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B CO704_RS01995 406e5729307335060a649166c5014161 142 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.512 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B CO704_RS01995 406e5729307335060a649166c5014161 142 SUPERFAMILY SSF89946 2 122 5.62E-43 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CO704_RS01995 406e5729307335060a649166c5014161 142 Gene3D G3DSA:3.30.70.970 3 116 3.7E-43 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 Gene3D G3DSA:1.25.40.20 2 143 2.4E-21 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SUPERFAMILY SSF48403 181 313 4.74E-44 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SUPERFAMILY SSF48403 4 93 4.74E-44 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 Pfam PF12796 Ankyrin repeats (3 copies) 226 286 4.8E-10 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 Pfam PF12796 Ankyrin repeats (3 copies) 12 95 6.2E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 Gene3D G3DSA:1.25.40.20 144 233 9.3E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 Gene3D G3DSA:1.25.40.20 234 317 1.2E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SMART SM00248 259 288 4.6E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SMART SM00248 34 63 2.5E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SMART SM00248 68 98 0.016 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SMART SM00248 222 253 270.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS18775 c6cbd38ad51f2948f8e96472ef73857b 317 SMART SM00248 188 217 0.13 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 29 426 8.1E-94 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 Gene3D G3DSA:2.130.10.120 98 421 3.0E-57 T 28-03-2018 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 Gene3D G3DSA:3.40.50.1820 422 691 4.5E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 495 519 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 629 651 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 626 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 487 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 553 573 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 523 542 2.9E-50 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 SUPERFAMILY SSF50993 25 429 2.56E-89 T 28-03-2018 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 530 560 - T 28-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 Pfam PF00326 Prolyl oligopeptidase family 484 698 3.7E-65 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS12110 140148d6d73ce4857804e9328c565fb8 702 SUPERFAMILY SSF53474 439 678 6.97E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS07150 a9f1f676d022f4cbdec504f1255bcc47 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.1E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07150 a9f1f676d022f4cbdec504f1255bcc47 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 69 6.5E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS07150 a9f1f676d022f4cbdec504f1255bcc47 303 SUPERFAMILY SSF161098 96 283 7.06E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07150 a9f1f676d022f4cbdec504f1255bcc47 303 Gene3D G3DSA:1.10.3720.10 28 291 3.2E-45 T 28-03-2018 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.662 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 4.5E-113 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 Gene3D G3DSA:3.40.1380.10 42 239 2.8E-75 T 28-03-2018 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 Pfam PF00231 ATP synthase 5 286 1.6E-96 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 SUPERFAMILY SSF52943 2 287 8.63E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 Gene3D G3DSA:1.10.287.80 240 282 1.8E-13 T 28-03-2018 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 Gene3D G3DSA:1.10.287.80 2 41 2.9E-18 T 28-03-2018 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.7E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.7E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.7E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24130 20e9a75c9bbb875b5e625d455f24c92a 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS16090 9703236c76465731b5e7876e05ad132e 314 Gene3D G3DSA:2.60.200.20 2 103 3.8E-11 T 28-03-2018 CO704_RS16090 9703236c76465731b5e7876e05ad132e 314 SUPERFAMILY SSF49879 2 92 2.73E-11 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 CO704_RS16090 9703236c76465731b5e7876e05ad132e 314 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 5 95 6.8E-14 T 28-03-2018 IPR032030 YscD, cytoplasmic domain CO704_RS16090 9703236c76465731b5e7876e05ad132e 314 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 4 52 0.008 T 28-03-2018 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 Gene3D G3DSA:3.40.50.1970 1 156 1.7E-30 T 28-03-2018 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 PIRSF PIRSF000112 1 355 9.8E-90 T 28-03-2018 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 344 5.3E-61 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 Gene3D G3DSA:1.20.1090.10 157 360 4.9E-39 T 28-03-2018 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 238 258 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 SUPERFAMILY SSF56796 1 350 3.01E-82 T 28-03-2018 CO704_RS25790 67fdc013c3ba2714aaae6b9f7e14e946 366 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 147 175 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS18105 72e44f37d219345566758ab2c2060621 430 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 2.2E-138 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CO704_RS18105 72e44f37d219345566758ab2c2060621 430 Gene3D G3DSA:1.10.3430.10 25 409 1.5E-132 T 28-03-2018 CO704_RS18105 72e44f37d219345566758ab2c2060621 430 Pfam PF00909 Ammonium Transporter Family 35 428 2.2E-127 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CO704_RS18105 72e44f37d219345566758ab2c2060621 430 SUPERFAMILY SSF111352 29 409 7.19E-129 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CO704_RS18105 72e44f37d219345566758ab2c2060621 430 ProSitePatterns PS01219 Ammonium transporters signature. 184 209 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CO704_RS25130 7772c4bb2e2f626252741b0ee7343d1c 358 Pfam PF02661 Fic/DOC family 132 212 1.4E-18 T 28-03-2018 IPR003812 Fido domain CO704_RS25130 7772c4bb2e2f626252741b0ee7343d1c 358 Gene3D G3DSA:1.10.3290.10 25 285 6.9E-43 T 28-03-2018 IPR003812 Fido domain CO704_RS25130 7772c4bb2e2f626252741b0ee7343d1c 358 PIRSF PIRSF038925 1 358 2.8E-110 T 28-03-2018 IPR026287 Adenosine monophosphate-protein transferase CO704_RS25130 7772c4bb2e2f626252741b0ee7343d1c 358 Pfam PF13784 Fic/DOC family N-terminal 28 107 1.2E-22 T 28-03-2018 IPR025758 Fic/DOC N-terminal CO704_RS25130 7772c4bb2e2f626252741b0ee7343d1c 358 SUPERFAMILY SSF140931 95 280 1.11E-33 T 28-03-2018 IPR003812 Fido domain CO704_RS01030 677d57def10806127b566c2688f830a9 275 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 154 3.4E-36 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CO704_RS01030 677d57def10806127b566c2688f830a9 275 SUPERFAMILY SSF54534 43 251 3.93E-64 T 28-03-2018 CO704_RS01030 677d57def10806127b566c2688f830a9 275 Gene3D G3DSA:1.10.287.460 28 135 3.9E-29 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CO704_RS01030 677d57def10806127b566c2688f830a9 275 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 248 3.0E-28 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CO704_RS01030 677d57def10806127b566c2688f830a9 275 Gene3D G3DSA:3.10.50.40 136 252 1.2E-42 T 28-03-2018 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 SUPERFAMILY SSF51905 2 174 9.86E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 SUPERFAMILY SSF51905 278 378 9.86E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 SUPERFAMILY SSF54373 176 278 3.06E-17 T 28-03-2018 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 Gene3D G3DSA:3.50.50.60 1 359 1.9E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 1.4E-5 T 28-03-2018 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 28-03-2018 CO704_RS03635 f5ca13530dc4ece064d92e0175ddaa4a 424 Pfam PF12831 FAD dependent oxidoreductase 7 152 5.7E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 SUPERFAMILY SSF52518 3 178 1.2E-42 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.7E-29 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 2.2E-40 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 SUPERFAMILY SSF52467 182 349 5.61E-43 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 SUPERFAMILY SSF52518 357 558 1.16E-61 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 3.2E-41 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Gene3D G3DSA:3.40.50.970 339 534 1.1E-43 T 28-03-2018 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Gene3D G3DSA:3.40.50.970 1 188 5.9E-42 T 28-03-2018 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS15770 94c95ffa94b890e7c5fadaac661f04cd 573 Gene3D G3DSA:3.40.50.1220 189 338 8.8E-34 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 3.6E-83 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.999 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 Gene3D G3DSA:3.40.47.10 256 384 3.4E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.9E-50 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.7E-144 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 SUPERFAMILY SSF53901 1 259 6.76E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 Gene3D G3DSA:3.40.47.10 1 255 2.5E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 8.4E-235 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 PIRSF PIRSF000429 1 387 5.0E-131 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 SUPERFAMILY SSF53901 262 386 1.95E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS23070 d3a1f8c5e65475155df3ca2fff3423d5 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 SUPERFAMILY SSF55021 2 74 1.85E-22 T 28-03-2018 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 SUPERFAMILY SSF55021 79 162 1.32E-25 T 28-03-2018 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.2E-23 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 Gene3D G3DSA:3.30.70.1150 88 161 1.4E-24 T 28-03-2018 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 6.2E-68 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 Pfam PF13710 ACT domain 12 73 2.8E-15 T 28-03-2018 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 Gene3D G3DSA:3.30.70.260 2 87 1.5E-23 T 28-03-2018 CO704_RS19695 651baa54d829b410ad82ae9d37006670 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-37 T 28-03-2018 CO704_RS18235 37d9a1d2c6c01bdaeb595f700f36dde1 202 SUPERFAMILY SSF81452 9 200 9.94E-61 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18235 37d9a1d2c6c01bdaeb595f700f36dde1 202 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 202 3.4E-88 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CO704_RS18235 37d9a1d2c6c01bdaeb595f700f36dde1 202 Gene3D G3DSA:1.20.120.80 17 202 7.3E-54 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18235 37d9a1d2c6c01bdaeb595f700f36dde1 202 Pfam PF00510 Cytochrome c oxidase subunit III 13 200 1.7E-17 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 Pfam PF00085 Thioredoxin 37 137 6.1E-27 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 SUPERFAMILY SSF52833 26 138 3.41E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 44 138 1.3E-35 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 Gene3D G3DSA:3.40.30.10 31 138 9.4E-34 T 28-03-2018 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 PIRSF PIRSF000077 35 139 5.1E-32 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 PRINTS PR00421 Thioredoxin family signature 103 114 3.0E-8 T 28-03-2018 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 PRINTS PR00421 Thioredoxin family signature 63 72 3.0E-8 T 28-03-2018 CO704_RS04525 4f225cdebaf6b69a4efcf1e2d757b223 139 PRINTS PR00421 Thioredoxin family signature 55 63 3.0E-8 T 28-03-2018 CO704_RS05535 721d87c0a88cb8742fbb9b670f5c9483 278 Gene3D G3DSA:3.40.190.10 121 220 4.5E-35 T 28-03-2018 CO704_RS05535 721d87c0a88cb8742fbb9b670f5c9483 278 SUPERFAMILY SSF53850 31 272 1.07E-63 T 28-03-2018 CO704_RS05535 721d87c0a88cb8742fbb9b670f5c9483 278 Gene3D G3DSA:3.40.190.10 30 120 3.9E-19 T 28-03-2018 CO704_RS05535 721d87c0a88cb8742fbb9b670f5c9483 278 Pfam PF03180 NLPA lipoprotein 32 259 1.6E-76 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS05175 972b3423f7aa61896e81a3884e6408a3 428 Pfam PF00860 Permease family 16 383 1.3E-105 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS05175 972b3423f7aa61896e81a3884e6408a3 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 4.4E-129 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS05175 972b3423f7aa61896e81a3884e6408a3 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS17765 64024cf1924a8c3b7abb764d974f5fd6 1136 Pfam PF14331 ImcF-related N-terminal domain 168 391 5.1E-25 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 SUPERFAMILY SSF46785 2 113 1.54E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 Gene3D G3DSA:1.10.10.10 1 85 1.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 Pfam PF03466 LysR substrate binding domain 91 294 2.0E-33 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 SUPERFAMILY SSF53850 92 297 4.07E-31 T 28-03-2018 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 Gene3D G3DSA:3.40.190.10 181 268 6.4E-18 T 28-03-2018 CO704_RS13190 bd18d24f75a98e6d78e85b82866dcb98 304 Gene3D G3DSA:3.40.190.10 90 180 7.7E-19 T 28-03-2018 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20850 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Gene3D G3DSA:1.20.272.10 252 346 8.1E-37 T 28-03-2018 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Gene3D G3DSA:1.10.3710.10 348 447 3.5E-35 T 28-03-2018 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 SUPERFAMILY SSF52540 6 228 2.09E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Pfam PF16193 AAA C-terminal domain 188 267 7.9E-23 T 28-03-2018 IPR032423 AAA C-terminal domain CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.6E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Gene3D G3DSA:3.40.50.300 2 153 4.3E-31 T 28-03-2018 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 SUPERFAMILY SSF48019 252 434 2.32E-72 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 SMART SM00382 49 165 5.5E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 4.5E-66 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CO704_RS15650 80c96ec908cd66afb10e1a776eae6bdc 447 Gene3D G3DSA:1.10.8.60 154 243 7.2E-20 T 28-03-2018 CO704_RS24070 a50e2285e18799d09f6689e6b4853d73 483 Gene3D G3DSA:3.40.50.410 301 463 8.0E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A CO704_RS24070 a50e2285e18799d09f6689e6b4853d73 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 56.021 T 28-03-2018 IPR023481 Uncharacterised protein family ViaA CO704_RS24070 a50e2285e18799d09f6689e6b4853d73 483 SUPERFAMILY SSF53300 318 459 5.65E-18 T 28-03-2018 IPR002035 von Willebrand factor, type A CO704_RS24070 a50e2285e18799d09f6689e6b4853d73 483 Pfam PF05762 VWA domain containing CoxE-like protein 308 456 3.8E-9 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like CO704_RS24070 a50e2285e18799d09f6689e6b4853d73 483 SMART SM00327 319 483 1.7E-10 T 28-03-2018 IPR002035 von Willebrand factor, type A CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 1.3E-34 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF51230 1132 1204 3.27E-19 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:2.40.50.100 1130 1205 4.8E-18 T 28-03-2018 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF52440 1 111 1.51E-45 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 317 1.8E-58 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF51246 330 442 1.99E-35 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SMART SM00878 336 440 1.4E-54 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SMART SM00797 471 768 4.5E-169 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:3.30.1360.40 792 890 3.6E-26 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF160467 810 901 1.18E-17 T 28-03-2018 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF00364 Biotin-requiring enzyme 1143 1201 1.1E-14 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF50891 632 756 1.63E-33 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF50891 925 1056 3.26E-27 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.1E-43 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SMART SM00796 808 1040 1.6E-106 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:2.40.100.10 896 1058 3.8E-48 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 SUPERFAMILY SSF56059 83 352 4.95E-64 T 28-03-2018 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 472 751 9.1E-89 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 449 772 1.5E-97 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1160 1177 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:3.30.470.20 209 442 1.0E-92 T 28-03-2018 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:3.30.1490.20 124 208 5.7E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1204 0.0 T 28-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 809 1026 4.0E-45 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS10700 e28009f0e58b68dacb8f5e1fc7685559 1206 Gene3D G3DSA:3.40.50.20 1 123 1.4E-48 T 28-03-2018 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.945 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 Gene3D G3DSA:3.40.440.10 1 151 1.3E-53 T 28-03-2018 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 Gene3D G3DSA:3.40.440.10 152 266 1.6E-27 T 28-03-2018 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.5E-177 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 Gene3D G3DSA:3.90.170.10 267 432 4.9E-66 T 28-03-2018 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.4E-206 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 SMART SM00788 4 425 9.2E-302 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CO704_RS20945 5ac1db419455ed120b0639a792ecd06a 432 SUPERFAMILY SSF52540 3 431 3.29E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS25545 51a6f09fbed1f6842a271d993733f3bf 245 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 245 29.905 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CO704_RS25545 51a6f09fbed1f6842a271d993733f3bf 245 SUPERFAMILY SSF56300 1 237 3.11E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS25545 51a6f09fbed1f6842a271d993733f3bf 245 Pfam PF00149 Calcineurin-like phosphoesterase 1 193 2.4E-14 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS25545 51a6f09fbed1f6842a271d993733f3bf 245 Gene3D G3DSA:3.60.21.10 1 242 6.9E-32 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS11500 ee87f791a416261771e48b3838467c66 497 PIRSF PIRSF002741 22 485 6.1E-102 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS11500 ee87f791a416261771e48b3838467c66 497 Gene3D G3DSA:3.40.190.10 142 276 2.0E-42 T 28-03-2018 CO704_RS11500 ee87f791a416261771e48b3838467c66 497 Gene3D G3DSA:3.10.105.10 277 468 1.8E-49 T 28-03-2018 CO704_RS11500 ee87f791a416261771e48b3838467c66 497 Gene3D G3DSA:3.90.76.10 47 141 3.5E-30 T 28-03-2018 CO704_RS11500 ee87f791a416261771e48b3838467c66 497 SUPERFAMILY SSF53850 25 480 1.47E-128 T 28-03-2018 CO704_RS11500 ee87f791a416261771e48b3838467c66 497 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 420 2.3E-93 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 6.0E-63 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.9E-52 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 SUPERFAMILY SSF74982 8 138 4.19E-50 T 28-03-2018 IPR023620 Small protein B CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 70.774 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 Pfam PF01668 SmpB protein 14 157 9.0E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 Gene3D G3DSA:2.40.280.10 14 133 2.3E-45 T 28-03-2018 IPR023620 Small protein B CO704_RS04345 41c056988f566d075de2cb9cc4138f7b 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site CO704_RS15415 824ce078310fbc9287a46c3dd86a93be 188 SUPERFAMILY SSF159594 24 185 2.2E-28 T 28-03-2018 CO704_RS15415 824ce078310fbc9287a46c3dd86a93be 188 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 181 1.3E-40 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CO704_RS15415 824ce078310fbc9287a46c3dd86a93be 188 Gene3D G3DSA:3.40.50.10610 12 188 6.0E-43 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CO704_RS09690 213f0b89590dfcda431ad9f00f48a4bd 284 Pfam PF00793 DAHP synthetase I family 10 274 3.8E-67 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS09690 213f0b89590dfcda431ad9f00f48a4bd 284 SUPERFAMILY SSF51569 3 277 9.16E-104 T 28-03-2018 CO704_RS09690 213f0b89590dfcda431ad9f00f48a4bd 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.103 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS09690 213f0b89590dfcda431ad9f00f48a4bd 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.4E-118 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS09690 213f0b89590dfcda431ad9f00f48a4bd 284 Gene3D G3DSA:3.20.20.70 17 278 5.8E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS01970 2871f718fc55d642f790a4964ef54cad 489 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 16 488 5.3E-172 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CO704_RS01970 2871f718fc55d642f790a4964ef54cad 489 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 19 488 3.4E-184 T 28-03-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 CO704_RS01970 2871f718fc55d642f790a4964ef54cad 489 PIRSF PIRSF006060 2 485 1.7E-48 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS01970 2871f718fc55d642f790a4964ef54cad 489 Pfam PF13520 Amino acid permease 20 428 1.4E-76 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS18960 038204eb5ee671f373b56e5b20acb2dc 415 Gene3D G3DSA:3.40.50.1820 154 407 2.4E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS18960 038204eb5ee671f373b56e5b20acb2dc 415 SUPERFAMILY SSF53474 46 414 4.27E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS18960 038204eb5ee671f373b56e5b20acb2dc 415 Gene3D G3DSA:1.20.1440.110 49 153 7.3E-24 T 28-03-2018 CO704_RS18960 038204eb5ee671f373b56e5b20acb2dc 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 61.134 T 28-03-2018 IPR010520 UPF0255 family CO704_RS18960 038204eb5ee671f373b56e5b20acb2dc 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 1.4E-208 T 28-03-2018 IPR010520 UPF0255 family CO704_RS16075 84dcc326260bd7527726e4722348507d 197 Gene3D G3DSA:1.10.10.10 106 193 1.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16075 84dcc326260bd7527726e4722348507d 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 190 2.7E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS16075 84dcc326260bd7527726e4722348507d 197 Gene3D G3DSA:1.10.1740.10 31 104 4.8E-16 T 28-03-2018 CO704_RS16075 84dcc326260bd7527726e4722348507d 197 SUPERFAMILY SSF88659 131 191 3.27E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS16075 84dcc326260bd7527726e4722348507d 197 Pfam PF08281 Sigma-70, region 4 136 187 2.0E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS16075 84dcc326260bd7527726e4722348507d 197 Pfam PF04542 Sigma-70 region 2 38 100 3.3E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS16075 84dcc326260bd7527726e4722348507d 197 SUPERFAMILY SSF88946 33 109 8.24E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 Gene3D G3DSA:3.10.105.10 303 508 1.4E-57 T 28-03-2018 CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 453 9.9E-85 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 PIRSF PIRSF002741 1 538 7.1E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 SUPERFAMILY SSF53850 32 530 2.52E-142 T 28-03-2018 CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 Gene3D G3DSA:3.90.76.10 45 205 2.1E-42 T 28-03-2018 CO704_RS10520 509bc51597b0668992fa4016d867e61f 539 Gene3D G3DSA:3.40.190.10 206 302 3.1E-22 T 28-03-2018 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.2E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 SUPERFAMILY SSF52413 310 419 1.07E-27 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 2.3E-58 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 9.6E-20 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 SUPERFAMILY SSF48179 206 298 5.44E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Gene3D G3DSA:1.20.5.170 206 229 1.0E-14 T 28-03-2018 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 79.506 T 28-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Gene3D G3DSA:3.40.50.720 3 205 1.3E-44 T 28-03-2018 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 Gene3D G3DSA:3.40.50.720 230 420 4.4E-51 T 28-03-2018 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 4.6E-119 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 SMART SM00984 324 420 1.8E-27 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 SUPERFAMILY SSF51735 5 198 7.99E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 PIRSF PIRSF500136 1 420 1.7E-146 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CO704_RS23335 a96d15fa343871d3b82de910d28050f8 420 PIRSF PIRSF000124 4 418 4.5E-76 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CO704_RS01685 6ec94f6d5bc307a74539b4652eefb702 209 Pfam PF05494 MlaC protein 31 196 6.3E-54 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CO704_RS01685 6ec94f6d5bc307a74539b4652eefb702 209 PIRSF PIRSF004649 1 209 2.2E-61 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CO704_RS01685 6ec94f6d5bc307a74539b4652eefb702 209 Gene3D G3DSA:3.10.450.50 70 170 9.8E-22 T 28-03-2018 CO704_RS01685 6ec94f6d5bc307a74539b4652eefb702 209 Gene3D G3DSA:3.10.450.50 24 69 1.3E-5 T 28-03-2018 CO704_RS11295 24ea464913442d725dca174ae2fc213e 76 PIRSF PIRSF037799 1 76 8.6E-28 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 CO704_RS11295 24ea464913442d725dca174ae2fc213e 76 Pfam PF01361 Tautomerase enzyme 2 45 6.7E-8 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CO704_RS11295 24ea464913442d725dca174ae2fc213e 76 Gene3D G3DSA:3.30.429.10 2 66 6.3E-14 T 28-03-2018 CO704_RS11295 24ea464913442d725dca174ae2fc213e 76 SUPERFAMILY SSF55331 2 75 8.86E-13 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily CO704_RS05770 6c8fcec1a35521f13ad1c1de434e454b 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 2.8E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS05770 6c8fcec1a35521f13ad1c1de434e454b 141 PIRSF PIRSF037663 1 132 2.9E-11 T 28-03-2018 IPR017255 Acetyltransferase, GNAT, predicted CO704_RS05770 6c8fcec1a35521f13ad1c1de434e454b 141 SUPERFAMILY SSF55729 1 129 2.62E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS05770 6c8fcec1a35521f13ad1c1de434e454b 141 Gene3D G3DSA:3.40.630.30 1 141 1.9E-32 T 28-03-2018 CO704_RS05770 6c8fcec1a35521f13ad1c1de434e454b 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 48.93 T 28-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.7 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.5E-31 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 SUPERFAMILY SSF53901 4 317 1.11E-70 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 Gene3D G3DSA:3.40.47.10 2 162 6.2E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 7.6E-148 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 Gene3D G3DSA:3.40.47.10 163 317 7.2E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS14560 b8cae30781fad646d7edf8b5dcd4fb62 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.7E-36 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CO704_RS08510 b5eeb83396d6515c557e4eb6e1943892 238 Gene3D G3DSA:3.40.50.150 2 210 1.6E-16 T 28-03-2018 CO704_RS08510 b5eeb83396d6515c557e4eb6e1943892 238 SUPERFAMILY SSF53335 13 183 7.56E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08510 b5eeb83396d6515c557e4eb6e1943892 238 Pfam PF13649 Methyltransferase domain 48 137 2.1E-9 T 28-03-2018 CO704_RS08695 fd4b17d94379cc8e9961c4b914df73c6 192 SUPERFAMILY SSF160930 5 160 3.27E-64 T 28-03-2018 CO704_RS08695 fd4b17d94379cc8e9961c4b914df73c6 192 PIRSF PIRSF003159 1 181 1.5E-92 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CO704_RS08695 fd4b17d94379cc8e9961c4b914df73c6 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 1.1E-82 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CO704_RS08695 fd4b17d94379cc8e9961c4b914df73c6 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 1.0E-103 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CO704_RS08695 fd4b17d94379cc8e9961c4b914df73c6 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.515 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 SMART SM00490 492 589 4.0E-10 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.4E-5 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 1.4E-208 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 Gene3D G3DSA:3.40.50.300 196 361 3.3E-26 T 28-03-2018 CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 SMART SM00487 195 392 2.4E-18 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 Gene3D G3DSA:3.40.50.300 390 630 6.7E-22 T 28-03-2018 CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.573 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 SUPERFAMILY SSF52540 218 440 8.57E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 SUPERFAMILY SSF52540 503 601 8.57E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23575 5c3ba0738219b2a285da437fc0666e17 732 Pfam PF00270 DEAD/DEAH box helicase 203 364 8.6E-14 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.085 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 SUPERFAMILY SSF53697 7 249 8.45E-74 T 28-03-2018 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 Gene3D G3DSA:3.40.50.10490 20 241 1.2E-51 T 28-03-2018 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 Gene3D G3DSA:1.10.8.10 242 272 1.6E-9 T 28-03-2018 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 Gene3D G3DSA:1.10.8.10 273 298 0.0041 T 28-03-2018 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 1.4E-132 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CO704_RS02310 ced5ebd618baf9e5fc972b1c70056d1f 302 Pfam PF13580 SIS domain 44 167 2.8E-9 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS14495 7c85d891c5e8f3ca8a377c51276653f2 213 Pfam PF13036 Peptidoglycan-synthase activator LpoB 70 208 9.5E-37 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CO704_RS14495 7c85d891c5e8f3ca8a377c51276653f2 213 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 5 210 33.992 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CO704_RS14495 7c85d891c5e8f3ca8a377c51276653f2 213 Gene3D G3DSA:3.40.50.10070 90 213 1.9E-12 T 28-03-2018 CO704_RS14495 7c85d891c5e8f3ca8a377c51276653f2 213 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 7 211 5.9E-54 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CO704_RS06705 3d926e1d10ee961a7b4db47e95502394 376 Gene3D G3DSA:1.10.620.20 1 346 9.7E-115 T 28-03-2018 CO704_RS06705 3d926e1d10ee961a7b4db47e95502394 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06705 3d926e1d10ee961a7b4db47e95502394 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 2.5E-47 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06705 3d926e1d10ee961a7b4db47e95502394 376 SUPERFAMILY SSF47240 3 340 2.81E-113 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS18745 1d96e13a180d4e1fc233e97b36eede80 877 Pfam PF00577 Outer membrane usher protein 208 789 3.7E-218 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CO704_RS18745 1d96e13a180d4e1fc233e97b36eede80 877 Pfam PF13954 PapC N-terminal domain 47 191 5.7E-50 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CO704_RS18745 1d96e13a180d4e1fc233e97b36eede80 877 Pfam PF13953 PapC C-terminal domain 798 861 1.1E-20 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CO704_RS18745 1d96e13a180d4e1fc233e97b36eede80 877 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 324 334 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CO704_RS18745 1d96e13a180d4e1fc233e97b36eede80 877 SUPERFAMILY SSF141729 71 183 5.49E-36 T 28-03-2018 CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 Gene3D G3DSA:1.20.1050.10 189 327 4.6E-44 T 28-03-2018 CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 3.6E-23 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 SUPERFAMILY SSF47616 176 324 2.23E-37 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 Gene3D G3DSA:3.40.30.10 42 188 6.1E-36 T 28-03-2018 CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 SUPERFAMILY SSF52833 126 162 3.36E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 SUPERFAMILY SSF52833 42 99 3.36E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 271 1.4E-12 T 28-03-2018 CO704_RS20710 b355100409fb854c649ba4f984d5c4cb 330 PIRSF PIRSF015753 5 324 1.3E-133 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 373 1.4E-19 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 SUPERFAMILY SSF69189 282 375 2.94E-20 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 SMART SM00936 282 373 1.6E-23 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 SUPERFAMILY SSF56601 2 282 4.13E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 Gene3D G3DSA:2.60.410.10 300 373 1.8E-15 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 Gene3D G3DSA:3.40.710.10 16 299 3.4E-54 T 28-03-2018 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 4.2E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 4.2E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 4.2E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS07730 f5b0b0e4a38f479ba9d7dc50ec6c0dd8 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 260 3.3E-93 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CO704_RS25095 c4532154ce381b7f1022280fdc316f7f 728 Gene3D G3DSA:2.130.10.10 193 395 2.6E-7 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS25095 c4532154ce381b7f1022280fdc316f7f 728 Gene3D G3DSA:2.120.10.30 6 192 4.9E-5 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CO704_RS25095 c4532154ce381b7f1022280fdc316f7f 728 SUPERFAMILY SSF50969 221 369 5.89E-9 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CO704_RS25095 c4532154ce381b7f1022280fdc316f7f 728 SUPERFAMILY SSF50969 80 148 5.89E-9 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 SUPERFAMILY SSF54631 255 368 1.95E-14 T 28-03-2018 CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 5.2E-104 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 Pfam PF00005 ABC transporter 22 168 3.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 SMART SM00116 263 311 6.9E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 Pfam PF00571 CBS domain 257 305 3.1E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 Gene3D G3DSA:3.10.580.10 257 371 1.4E-12 T 28-03-2018 CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 Gene3D G3DSA:3.40.50.300 1 256 4.6E-72 T 28-03-2018 CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 SUPERFAMILY SSF52540 1 244 2.99E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 SMART SM00382 31 218 1.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12635 48d520c80ae08518599a24ec5bfe7c20 381 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 2.2E-93 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 SMART SM00448 1 111 4.0E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 Gene3D G3DSA:1.10.10.10 121 225 5.0E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.7E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 SUPERFAMILY SSF52172 1 176 6.34E-40 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 Gene3D G3DSA:3.40.50.2300 1 120 8.1E-34 T 28-03-2018 CO704_RS11215 4a2c2916b691588f8aac33a7915f3a0d 225 SMART SM00862 146 221 9.1E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 29.459 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 Gene3D G3DSA:3.30.2340.10 166 301 6.8E-30 T 28-03-2018 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 172 2.9E-41 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 336 2.6E-19 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 340 5.4E-93 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03710 3425fa93bf56204f98979c4d2a28405c 348 SUPERFAMILY SSF55120 3 338 1.73E-106 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS19000 f0cfd59aedd121e8f40fe5211586fd56 255 Pfam PF00795 Carbon-nitrogen hydrolase 5 241 6.5E-31 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS19000 f0cfd59aedd121e8f40fe5211586fd56 255 Gene3D G3DSA:3.60.110.10 2 254 5.4E-56 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS19000 f0cfd59aedd121e8f40fe5211586fd56 255 SUPERFAMILY SSF56317 4 249 5.23E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS19000 f0cfd59aedd121e8f40fe5211586fd56 255 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CO704_RS03220 e50cb5ba052b74070f94692f7fada203 225 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 114 5.2E-7 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS03220 e50cb5ba052b74070f94692f7fada203 225 Gene3D G3DSA:3.40.50.720 2 206 9.1E-16 T 28-03-2018 CO704_RS03220 e50cb5ba052b74070f94692f7fada203 225 SUPERFAMILY SSF51735 1 203 2.36E-26 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 Gene3D G3DSA:3.90.1150.10 277 397 1.7E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 Gene3D G3DSA:3.90.1150.10 20 98 7.3E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 54.015 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 Gene3D G3DSA:3.40.640.10 99 276 6.2E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 SUPERFAMILY SSF53383 4 396 5.51E-128 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-78 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS23740 49d9fd3d3c87521d050e917f8286b75f 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.5E-221 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 7.0E-20 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 SUPERFAMILY SSF50615 1 75 4.71E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Gene3D G3DSA:2.40.10.170 1 75 1.1E-30 T 28-03-2018 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Gene3D G3DSA:1.10.1140.10 348 458 1.1E-45 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 SUPERFAMILY SSF47917 345 459 1.23E-55 T 28-03-2018 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 SMART SM00382 142 405 0.003 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 3.1E-63 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Gene3D G3DSA:3.40.50.300 76 347 3.8E-90 T 28-03-2018 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 SUPERFAMILY SSF52540 77 348 9.94E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.3E-261 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24135 3dada63f31c837fc3599ff46c6adaa10 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.955 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 357 376 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 299 320 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 233 252 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 70 88 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 130 149 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 151 170 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 171 190 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 PRINTS PR00181 Maltose binding protein signature 36 54 4.3E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 Gene3D G3DSA:3.40.190.10 199 357 1.5E-7 T 28-03-2018 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 Gene3D G3DSA:3.40.190.10 32 198 2.1E-30 T 28-03-2018 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 343 3.1E-41 T 28-03-2018 CO704_RS22695 888d648f578b07c6e3dc0ce3e7479900 396 SUPERFAMILY SSF53850 29 395 1.24E-95 T 28-03-2018 CO704_RS21925 52a1eb269e1cbfe465878901d527fb0d 128 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 25 127 2.1E-38 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 CO704_RS21925 52a1eb269e1cbfe465878901d527fb0d 128 Pfam PF11190 Protein of unknown function (DUF2976) 40 126 3.9E-32 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 CO704_RS23785 9caee578a958d01ee842c839afc5e32d 350 Gene3D G3DSA:3.40.50.2000 164 347 2.7E-40 T 28-03-2018 CO704_RS23785 9caee578a958d01ee842c839afc5e32d 350 Gene3D G3DSA:3.40.50.2000 2 161 7.5E-33 T 28-03-2018 CO704_RS23785 9caee578a958d01ee842c839afc5e32d 350 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 8 343 1.9E-145 T 28-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CO704_RS23785 9caee578a958d01ee842c839afc5e32d 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 326 9.5E-63 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CO704_RS23785 9caee578a958d01ee842c839afc5e32d 350 SUPERFAMILY SSF53756 6 344 3.14E-79 T 28-03-2018 CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 Gene3D G3DSA:3.40.190.10 178 265 3.2E-24 T 28-03-2018 CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 9.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 SUPERFAMILY SSF53850 90 296 3.08E-46 T 28-03-2018 CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 Gene3D G3DSA:3.40.190.10 92 177 1.4E-19 T 28-03-2018 CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 Pfam PF03466 LysR substrate binding domain 89 292 2.5E-46 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 Gene3D G3DSA:1.10.10.10 3 86 2.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11170 31b3f373f3c608784a40205cd72eba18 304 SUPERFAMILY SSF46785 3 112 7.78E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01680 e449c42a1066be7ac533141ab5a3bcef 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 152 8.3E-56 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CO704_RS01680 e449c42a1066be7ac533141ab5a3bcef 183 Pfam PF02470 MlaD protein 39 115 1.3E-20 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS05210 0bc7f8a1fb7e26c16d9aada441f9c2aa 412 Gene3D G3DSA:2.130.10.10 24 312 3.1E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS05210 0bc7f8a1fb7e26c16d9aada441f9c2aa 412 SUPERFAMILY SSF51004 119 385 5.49E-7 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CO704_RS05210 0bc7f8a1fb7e26c16d9aada441f9c2aa 412 Pfam PF08309 LVIVD repeat 30 59 0.41 T 28-03-2018 IPR013211 LVIVD CO704_RS05210 0bc7f8a1fb7e26c16d9aada441f9c2aa 412 Pfam PF08309 LVIVD repeat 216 245 9.6E-4 T 28-03-2018 IPR013211 LVIVD CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 Pfam PF04055 Radical SAM superfamily 43 202 2.2E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 SUPERFAMILY SSF102114 13 255 1.83E-44 T 28-03-2018 CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 SMART SM00729 23 247 2.0E-42 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 5.6E-135 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 Pfam PF16199 Radical_SAM C-terminal domain 208 286 3.0E-17 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CO704_RS01575 1acd8b6300b7fae9fd456ec3418502fe 310 Gene3D G3DSA:3.20.20.70 3 297 8.4E-34 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 PIRSF PIRSF002741 1 541 7.7E-97 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 Gene3D G3DSA:3.40.190.10 209 304 1.2E-22 T 28-03-2018 CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 SUPERFAMILY SSF53850 36 537 6.33E-136 T 28-03-2018 CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 Gene3D G3DSA:3.90.76.10 45 208 1.6E-34 T 28-03-2018 CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 4.7E-85 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS10460 99a13a59ee657e5558a2213e3cb71882 545 Gene3D G3DSA:3.10.105.10 305 510 8.7E-55 T 28-03-2018 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 Pfam PF03466 LysR substrate binding domain 87 290 4.3E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 Gene3D G3DSA:1.10.10.10 1 83 7.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 SUPERFAMILY SSF46785 1 86 3.63E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 Gene3D G3DSA:3.40.190.10 88 178 3.7E-16 T 28-03-2018 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 Gene3D G3DSA:3.40.190.10 179 269 1.8E-21 T 28-03-2018 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 SUPERFAMILY SSF53850 88 290 1.86E-30 T 28-03-2018 CO704_RS12755 cd677f529d1e9dd5f157032f7c5ecbfb 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.9E-25 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Gene3D G3DSA:3.10.20.30 263 362 2.8E-46 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.8E-176 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Gene3D G3DSA:1.10.150.300 110 200 1.4E-27 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 PIRSF PIRSF006641 1 363 4.0E-158 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 9.2E-22 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.545 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 SUPERFAMILY SSF81271 279 359 3.49E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.6E-40 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 SUPERFAMILY SSF52540 3 301 1.77E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09605 ab651adb6b3c5101e90f289918a20d42 363 Gene3D G3DSA:3.40.50.300 1 80 2.5E-8 T 28-03-2018 CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 Gene3D G3DSA:3.40.50.1980 139 293 6.3E-30 T 28-03-2018 CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 Pfam PF01497 Periplasmic binding protein 37 269 2.0E-31 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 SUPERFAMILY SSF53807 34 291 1.88E-52 T 28-03-2018 CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 Gene3D G3DSA:3.40.50.1980 31 138 2.1E-14 T 28-03-2018 CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 183 198 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 272 285 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 235 252 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS14810 9383b78aeb229e344e8d78c87029dad5 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 207 225 8.4E-28 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 Gene3D G3DSA:3.40.1670.10 326 462 3.2E-52 T 28-03-2018 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 3.0E-187 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 74.09 T 28-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 Gene3D G3DSA:1.20.5.570 463 490 6.7E-18 T 28-03-2018 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 SUPERFAMILY SSF50475 6 325 5.1E-127 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 SUPERFAMILY SSF143968 326 489 1.23E-64 T 28-03-2018 CO704_RS23080 52c803f4a75dd36a568e1457cb424861 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 2.3E-171 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CO704_RS20150 825debba0efcd6268d5ac0ec4f9c2799 147 Pfam PF00583 Acetyltransferase (GNAT) family 24 120 5.0E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS20150 825debba0efcd6268d5ac0ec4f9c2799 147 SUPERFAMILY SSF55729 3 146 1.25E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS20150 825debba0efcd6268d5ac0ec4f9c2799 147 Gene3D G3DSA:3.40.630.30 1 147 3.5E-32 T 28-03-2018 CO704_RS20150 825debba0efcd6268d5ac0ec4f9c2799 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 1.3E-42 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CO704_RS03260 a7771a111dcdf6e87470e3dae1eda5a2 167 SUPERFAMILY SSF54211 3 164 9.86E-55 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS03260 a7771a111dcdf6e87470e3dae1eda5a2 167 Gene3D G3DSA:3.30.230.60 3 163 9.9E-55 T 28-03-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CO704_RS03260 a7771a111dcdf6e87470e3dae1eda5a2 167 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 5 162 5.4E-53 T 28-03-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CO704_RS03260 a7771a111dcdf6e87470e3dae1eda5a2 167 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 3 151 1.9E-41 T 28-03-2018 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|MetaCyc: PWY-7796 CO704_RS00145 e538e6c55bea7ee1746aa0555c26522c 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 10 30 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CO704_RS00145 e538e6c55bea7ee1746aa0555c26522c 133 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 103 1.7E-10 T 28-03-2018 CO704_RS00145 e538e6c55bea7ee1746aa0555c26522c 133 Gene3D G3DSA:3.10.180.10 2 132 1.8E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS00145 e538e6c55bea7ee1746aa0555c26522c 133 SUPERFAMILY SSF54593 5 131 2.01E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 287 300 8.2E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 8.2E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 286 8.2E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 Gene3D G3DSA:3.20.20.100 15 334 1.7E-84 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 Pfam PF00248 Aldo/keto reductase family 28 332 2.6E-76 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS02595 57f91b3ab13ae709e3722c204d4db1ed 346 SUPERFAMILY SSF51430 13 331 3.14E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 SUPERFAMILY SSF103473 13 385 1.57E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 86 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 PRINTS PR01035 Tetracycline resistance protein signature 343 366 4.7E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 PRINTS PR01035 Tetracycline resistance protein signature 51 70 4.7E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 PRINTS PR01035 Tetracycline resistance protein signature 140 162 4.7E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 Pfam PF07690 Major Facilitator Superfamily 19 359 2.3E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 Gene3D G3DSA:1.20.1250.20 211 397 6.4E-15 T 28-03-2018 CO704_RS05570 792cfe38fe3411518cf328c8df4067fb 401 Gene3D G3DSA:1.20.1250.20 10 205 4.2E-32 T 28-03-2018 CO704_RS24690 b6ebbe3e384c7aefe73730b56adb7ee1 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.1E-27 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS24690 b6ebbe3e384c7aefe73730b56adb7ee1 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 7.0E-15 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS24690 b6ebbe3e384c7aefe73730b56adb7ee1 46 Pfam PF00468 Ribosomal protein L34 1 44 2.3E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS24690 b6ebbe3e384c7aefe73730b56adb7ee1 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS24690 b6ebbe3e384c7aefe73730b56adb7ee1 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.121 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS19555 05ecb0cf523e1afa4c3c9a8cb6a6d2e1 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS19555 05ecb0cf523e1afa4c3c9a8cb6a6d2e1 151 Gene3D G3DSA:3.30.700.10 7 149 2.3E-22 T 28-03-2018 CO704_RS19555 05ecb0cf523e1afa4c3c9a8cb6a6d2e1 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 9.6E-11 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS19555 05ecb0cf523e1afa4c3c9a8cb6a6d2e1 151 SUPERFAMILY SSF54523 7 113 6.8E-22 T 28-03-2018 CO704_RS19555 05ecb0cf523e1afa4c3c9a8cb6a6d2e1 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.5E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS16205 3fe83bec0d6cf27dd2812ddad67cc6f1 141 SUPERFAMILY SSF69635 3 127 4.6E-9 T 28-03-2018 CO704_RS16205 3fe83bec0d6cf27dd2812ddad67cc6f1 141 Gene3D G3DSA:3.30.1460.10 3 138 8.1E-24 T 28-03-2018 CO704_RS16205 3fe83bec0d6cf27dd2812ddad67cc6f1 141 Pfam PF05932 Tir chaperone protein (CesT) family 15 121 4.4E-16 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 PIRSF PIRSF002181 1 142 1.4E-50 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 Gene3D G3DSA:3.90.1180.10 1 142 8.2E-63 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 Pfam PF00572 Ribosomal protein L13 15 138 5.3E-57 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 SUPERFAMILY SSF52161 1 140 1.01E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.654 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CO704_RS01540 61d5358facc899e6342f864b464ff0b7 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.2E-68 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS10485 0df2f18ab7ef83287cae657074940280 76 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 10 70 1.4E-27 T 28-03-2018 IPR014321 Phage shock protein, PspD CO704_RS10485 0df2f18ab7ef83287cae657074940280 76 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 12 70 3.5E-27 T 28-03-2018 IPR014321 Phage shock protein, PspD CO704_RS21755 ccc5dc521a91e745ebb91b7c631f3d67 261 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 3.3E-106 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CO704_RS21755 ccc5dc521a91e745ebb91b7c631f3d67 261 Gene3D G3DSA:3.90.550.10 1 251 1.7E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS21755 ccc5dc521a91e745ebb91b7c631f3d67 261 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 42.629 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CO704_RS21755 ccc5dc521a91e745ebb91b7c631f3d67 261 Pfam PF02348 Cytidylyltransferase 4 222 2.9E-61 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CO704_RS21755 ccc5dc521a91e745ebb91b7c631f3d67 261 SUPERFAMILY SSF53448 1 249 1.13E-60 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 315 5.3E-16 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 PIRSF PIRSF036565 1 550 2.2E-206 T 28-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Gene3D G3DSA:3.40.50.1220 193 339 7.0E-20 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 SUPERFAMILY SSF52518 3 177 2.0E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 176 1.4E-31 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 SUPERFAMILY SSF52518 355 541 9.58E-45 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 SUPERFAMILY SSF52467 165 335 6.22E-27 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Gene3D G3DSA:3.40.50.970 1 192 1.4E-46 T 28-03-2018 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Gene3D G3DSA:3.40.50.970 340 542 2.3E-34 T 28-03-2018 CO704_RS05965 fe1795be5f09f4ef7e4aec94c6f4143f 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 526 5.1E-18 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS20895 86cbb13dae1e26da9eabe675de76e0bd 464 Pfam PF03611 PTS system sugar-specific permease component 15 411 1.2E-124 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CO704_RS09230 582f18809910d2672af0705e09baa708 353 Gene3D G3DSA:1.10.530.10 228 353 1.1E-33 T 28-03-2018 CO704_RS09230 582f18809910d2672af0705e09baa708 353 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 54 350 1.6E-111 T 28-03-2018 IPR011970 Lytic murein transglycosylase CO704_RS09230 582f18809910d2672af0705e09baa708 353 Pfam PF13406 Transglycosylase SLT domain 55 348 1.0E-101 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 CO704_RS09230 582f18809910d2672af0705e09baa708 353 SUPERFAMILY SSF53955 45 350 6.0E-91 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS09230 582f18809910d2672af0705e09baa708 353 Gene3D G3DSA:1.10.8.350 118 223 2.6E-33 T 28-03-2018 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Pfam PF00676 Dehydrogenase E1 component 221 512 2.0E-47 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Gene3D G3DSA:3.40.50.970 589 799 4.6E-57 T 28-03-2018 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 PIRSF PIRSF000157 1 934 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 1.2E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Gene3D G3DSA:1.10.287.1150 84 165 3.4E-23 T 28-03-2018 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 SUPERFAMILY SSF52518 120 548 5.13E-87 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 SMART SM00861 593 786 5.8E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 2.5E-53 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 6.4E-16 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 Gene3D G3DSA:3.40.50.970 167 519 2.8E-92 T 28-03-2018 CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 SUPERFAMILY SSF52518 576 793 2.75E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS16675 7b04d796d9764e3f642af13c1fd02873 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 932 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CO704_RS25535 8a4987a99e51238910406690eae1829d 218 SUPERFAMILY SSF47413 16 79 2.51E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25535 8a4987a99e51238910406690eae1829d 218 Gene3D G3DSA:1.10.260.40 11 86 4.1E-13 T 28-03-2018 CO704_RS25535 8a4987a99e51238910406690eae1829d 218 SMART SM00530 22 77 9.1E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25535 8a4987a99e51238910406690eae1829d 218 SUPERFAMILY SSF51306 104 214 3.66E-7 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS25535 8a4987a99e51238910406690eae1829d 218 Pfam PF01381 Helix-turn-helix 27 75 2.5E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25535 8a4987a99e51238910406690eae1829d 218 Gene3D G3DSA:2.10.109.10 100 217 2.9E-6 T 28-03-2018 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 PIRSF PIRSF036492 1 436 2.8E-149 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 Gene3D G3DSA:3.40.605.10 3 233 7.7E-64 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 Gene3D G3DSA:3.40.309.10 234 412 2.1E-51 T 28-03-2018 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 Pfam PF00171 Aldehyde dehydrogenase family 19 432 7.8E-86 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 242 253 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS16280 5693f0d5b97a244575b140adb18901c3 436 SUPERFAMILY SSF53720 11 435 5.63E-109 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 SMART SM00947 30 192 2.0E-70 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 Pfam PF00484 Carbonic anhydrase 38 188 8.1E-51 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 SUPERFAMILY SSF53056 2 213 1.05E-74 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 Gene3D G3DSA:3.40.1050.10 1 220 2.1E-74 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS19475 e24057ceb636a1161dbc5399f821a166 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 Gene3D G3DSA:3.40.190.10 178 266 1.7E-24 T 28-03-2018 CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 Gene3D G3DSA:1.10.10.10 1 85 2.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 Pfam PF03466 LysR substrate binding domain 90 294 1.3E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 SUPERFAMILY SSF46785 7 85 1.57E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 SUPERFAMILY SSF53850 92 294 2.33E-41 T 28-03-2018 CO704_RS11260 d1e620e82d09130127e3fc51141bf2a2 295 Gene3D G3DSA:3.40.190.10 90 177 1.8E-8 T 28-03-2018 CO704_RS14295 0412c8327576a4b2523b743055758310 373 SMART SM00558 92 215 7.1E-10 T 28-03-2018 IPR003347 JmjC domain CO704_RS14295 0412c8327576a4b2523b743055758310 373 Pfam PF08007 Cupin superfamily protein 10 310 5.4E-101 T 28-03-2018 IPR003347 JmjC domain CO704_RS14295 0412c8327576a4b2523b743055758310 373 Gene3D G3DSA:2.60.120.650 2 206 9.0E-28 T 28-03-2018 CO704_RS14295 0412c8327576a4b2523b743055758310 373 SUPERFAMILY SSF51197 7 292 9.2E-74 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Gene3D G3DSA:2.40.50.100 34 118 2.3E-8 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 3 410 52.807 T 28-03-2018 IPR022824 Multidrug resistance protein MdtA CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Pfam PF13437 HlyD family secretion protein 197 300 4.6E-7 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Gene3D G3DSA:2.40.50.100 191 376 2.0E-4 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Gene3D G3DSA:1.10.287.470 127 190 2.5E-13 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 SUPERFAMILY SSF111369 78 312 6.8E-55 T 28-03-2018 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 389 2.1E-77 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS07385 384ec3a149b92d29e0b6d3e1661718f1 417 Pfam PF13533 Biotin-lipoyl like 86 134 3.4E-15 T 28-03-2018 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 Pfam PF00158 Sigma-54 interaction domain 44 194 2.3E-54 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 Pfam PF02954 Bacterial regulatory protein, Fis family 279 317 3.6E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 Gene3D G3DSA:1.10.8.60 201 277 1.4E-13 T 28-03-2018 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 SUPERFAMILY SSF52540 42 256 5.55E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 53 66 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 SMART SM00382 49 191 9.5E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 SUPERFAMILY SSF46689 241 319 3.94E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 Gene3D G3DSA:1.10.10.60 278 320 5.9E-11 T 28-03-2018 CO704_RS16180 fd35001194ab43c874fcb541e08b6b2e 324 Gene3D G3DSA:3.40.50.300 29 200 9.2E-22 T 28-03-2018 CO704_RS06715 70707de209aa35d6f3b58df0aa152971 239 Pfam PF13489 Methyltransferase domain 57 200 1.7E-25 T 28-03-2018 CO704_RS06715 70707de209aa35d6f3b58df0aa152971 239 SUPERFAMILY SSF53335 9 219 5.3E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS06715 70707de209aa35d6f3b58df0aa152971 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.9E-89 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CO704_RS06715 70707de209aa35d6f3b58df0aa152971 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 239 36.516 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CO704_RS06715 70707de209aa35d6f3b58df0aa152971 239 Gene3D G3DSA:3.40.50.150 1 239 6.7E-47 T 28-03-2018 CO704_RS07320 f5fbe14222e2f172dac0e6e69e48597f 337 SUPERFAMILY SSF101478 2 314 1.44E-65 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CO704_RS07320 f5fbe14222e2f172dac0e6e69e48597f 337 Gene3D G3DSA:1.10.4080.10 1 323 8.6E-66 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CO704_RS07320 f5fbe14222e2f172dac0e6e69e48597f 337 Pfam PF03747 ADP-ribosylglycohydrolase 7 301 1.3E-58 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CO704_RS13970 c8e33cca336230d023069cee39636977 524 SUPERFAMILY SSF161098 290 509 2.62E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13970 c8e33cca336230d023069cee39636977 524 SUPERFAMILY SSF161098 6 248 2.62E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13970 c8e33cca336230d023069cee39636977 524 Gene3D G3DSA:1.10.3720.10 320 517 3.7E-11 T 28-03-2018 CO704_RS13970 c8e33cca336230d023069cee39636977 524 Gene3D G3DSA:1.10.3720.10 5 255 1.9E-16 T 28-03-2018 CO704_RS03500 ea8b712c464649bac9f922d44d218018 181 Hamap MF_01104 Protein Syd [syd]. 2 180 35.583 T 28-03-2018 IPR009948 Syd GO:0009898 CO704_RS03500 ea8b712c464649bac9f922d44d218018 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 1.4E-68 T 28-03-2018 IPR009948 Syd GO:0009898 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 SUPERFAMILY SSF55973 233 382 1.65E-71 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.873 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 SUPERFAMILY SSF55973 3 109 1.49E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 4.5E-200 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.8E-45 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Gene3D G3DSA:3.30.300.10 246 383 2.0E-50 T 28-03-2018 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Gene3D G3DSA:3.30.300.10 134 233 4.9E-43 T 28-03-2018 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 SUPERFAMILY SSF55973 112 232 3.92E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 4.8E-70 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 PIRSF PIRSF000497 1 382 1.5E-175 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Gene3D G3DSA:3.30.300.10 11 133 7.5E-45 T 28-03-2018 CO704_RS02840 1e8c5375e06d770289abd5bc15629425 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.2E-43 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CO704_RS15985 c3081224142e7b9808a871eaec168718 240 Gene3D G3DSA:3.40.50.300 1 240 1.2E-76 T 28-03-2018 CO704_RS15985 c3081224142e7b9808a871eaec168718 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15985 c3081224142e7b9808a871eaec168718 240 SUPERFAMILY SSF52540 1 235 4.2E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15985 c3081224142e7b9808a871eaec168718 240 SMART SM00382 26 213 4.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15985 c3081224142e7b9808a871eaec168718 240 Pfam PF00005 ABC transporter 17 165 1.1E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15985 c3081224142e7b9808a871eaec168718 240 PIRSF PIRSF039085 1 240 4.8E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 SMART SM00382 33 220 4.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 SUPERFAMILY SSF52540 4 234 1.44E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 Pfam PF12704 MacB-like periplasmic core domain 271 487 1.5E-33 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 Pfam PF00005 ABC transporter 24 172 3.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 Pfam PF02687 FtsX-like permease family 550 638 4.0E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 Gene3D G3DSA:3.40.50.300 1 229 1.1E-59 T 28-03-2018 CO704_RS21765 dda3204301ed4999632b7929d9d6735f 645 Gene3D G3DSA:1.20.1250.20 248 637 2.0E-4 T 28-03-2018 CO704_RS20310 2f18eb98bdbf066ac7c3872d136eb405 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 55 73 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CO704_RS20310 2f18eb98bdbf066ac7c3872d136eb405 264 SUPERFAMILY SSF51366 12 260 8.48E-88 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS20310 2f18eb98bdbf066ac7c3872d136eb405 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 257 2.9E-95 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CO704_RS20310 2f18eb98bdbf066ac7c3872d136eb405 264 Gene3D G3DSA:3.20.20.70 11 260 2.8E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20310 2f18eb98bdbf066ac7c3872d136eb405 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 261 35.973 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 Gene3D G3DSA:3.40.190.80 151 247 4.2E-33 T 28-03-2018 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 246 8.9E-104 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 SUPERFAMILY SSF56655 1 245 2.88E-72 T 28-03-2018 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 Gene3D G3DSA:3.30.540.10 1 150 3.7E-40 T 28-03-2018 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 Pfam PF00459 Inositol monophosphatase family 3 235 1.5E-49 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 206 220 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 2.1E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 2.1E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS20790 5ff0f11b5be16f409696d82f67bacbdb 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 2.1E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.2E-11 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-11 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 1.3E-226 T 28-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Gene3D G3DSA:3.90.700.10 259 337 1.2E-33 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PIRSF PIRSF000171 340 532 2.1E-13 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PIRSF PIRSF000171 1 311 2.4E-20 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 2.0E-14 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.2E-6 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.2E-6 T 28-03-2018 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 SUPERFAMILY SSF51905 6 255 1.81E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 SUPERFAMILY SSF51905 356 447 1.81E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 SUPERFAMILY SSF56425 238 353 2.39E-40 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Gene3D G3DSA:3.50.50.60 338 410 4.2E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Gene3D G3DSA:3.50.50.60 1 258 1.5E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 SUPERFAMILY SSF46977 425 524 1.44E-31 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Gene3D G3DSA:1.20.58.100 425 532 7.6E-29 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS04565 0f3ec0fb22e16bf3d84c83240f286e16 538 Pfam PF00890 FAD binding domain 10 392 1.8E-102 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 Gene3D G3DSA:3.40.190.10 175 263 1.1E-25 T 28-03-2018 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 Gene3D G3DSA:3.40.190.10 93 174 9.0E-10 T 28-03-2018 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 Pfam PF03466 LysR substrate binding domain 88 293 3.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 SUPERFAMILY SSF46785 2 112 1.51E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 Gene3D G3DSA:1.10.10.10 2 92 8.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 8.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12820 734abf9011ff83895af5480a88d83dc7 310 SUPERFAMILY SSF53850 88 298 1.5E-35 T 28-03-2018 CO704_RS19725 6b23be28bc0164a91e52a9a571c1f332 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 1.9E-98 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CO704_RS19725 6b23be28bc0164a91e52a9a571c1f332 201 SUPERFAMILY SSF52016 3 196 1.65E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS19725 6b23be28bc0164a91e52a9a571c1f332 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.409 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CO704_RS19725 6b23be28bc0164a91e52a9a571c1f332 201 Gene3D G3DSA:3.20.19.10 1 177 1.3E-51 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS19725 6b23be28bc0164a91e52a9a571c1f332 201 Pfam PF00694 Aconitase C-terminal domain 3 125 1.4E-38 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS03800 d5c4f956babfbf28dac5433b71fdb63a 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 2.3E-35 T 28-03-2018 IPR009693 Glucitol operon activator CO704_RS03800 d5c4f956babfbf28dac5433b71fdb63a 119 PIRSF PIRSF011474 1 119 2.3E-42 T 28-03-2018 IPR009693 Glucitol operon activator CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 SMART SM00448 7 115 2.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 Gene3D G3DSA:3.40.50.2300 2 116 4.2E-23 T 28-03-2018 CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 Pfam PF00072 Response regulator receiver domain 10 116 1.3E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 SMART SM00862 145 216 1.6E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 Gene3D G3DSA:1.10.10.10 117 220 5.4E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 SUPERFAMILY SSF52172 5 120 2.28E-26 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS12590 72c329c2b36046fe4e8bb147e1ddd775 220 SUPERFAMILY SSF46894 122 217 3.4E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 9.4E-55 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 1.1E-92 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 Gene3D G3DSA:3.40.50.880 1 187 7.4E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 SUPERFAMILY SSF52317 1 186 4.58E-55 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.9E-6 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.9E-6 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 8.4E-14 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.4E-14 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.4E-14 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.9E-37 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.9E-37 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 5.9E-37 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.9E-37 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.9E-37 T 28-03-2018 CO704_RS00955 719faa64f2a528571508d87cc30d495b 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.9E-37 T 28-03-2018 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 200 6.9E-42 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 6.7E-84 T 28-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 SUPERFAMILY SSF51569 1 218 6.41E-63 T 28-03-2018 CO704_RS10395 e0e22cc59eab64b4610fa3f8e514affe 220 Gene3D G3DSA:3.20.20.70 1 219 3.0E-55 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.394 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.8E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 651 9.0E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 1.6E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 4.9E-26 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 SUPERFAMILY SSF47323 662 859 2.06E-38 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Gene3D G3DSA:3.90.740.10 226 408 3.6E-53 T 28-03-2018 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.5E-79 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Gene3D G3DSA:1.10.730.10 648 796 2.5E-32 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 SUPERFAMILY SSF52374 416 668 6.24E-142 T 28-03-2018 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 SUPERFAMILY SSF52374 5 226 6.24E-142 T 28-03-2018 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Gene3D G3DSA:3.40.50.620 409 647 2.2E-56 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 3.5E-17 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 SUPERFAMILY SSF50677 226 415 2.2E-56 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Gene3D G3DSA:3.40.50.620 32 172 6.8E-49 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 Gene3D G3DSA:3.90.740.10 173 225 2.4E-5 T 28-03-2018 CO704_RS17210 e7263c08db03d2c9983caf806a5e673a 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CO704_RS04075 211461eb8c589d3f86c8b9f693456788 226 Gene3D G3DSA:3.40.109.10 2 222 9.0E-43 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS04075 211461eb8c589d3f86c8b9f693456788 226 SUPERFAMILY SSF55469 8 223 1.31E-34 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS04075 211461eb8c589d3f86c8b9f693456788 226 Pfam PF00881 Nitroreductase family 12 201 3.8E-25 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CO704_RS13975 eb88fb6a83dcb06ebb364426055e3285 207 SUPERFAMILY SSF52540 1 197 3.51E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13975 eb88fb6a83dcb06ebb364426055e3285 207 SMART SM00382 26 206 0.0022 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS13975 eb88fb6a83dcb06ebb364426055e3285 207 Gene3D G3DSA:3.40.50.300 1 207 8.0E-46 T 28-03-2018 CO704_RS13975 eb88fb6a83dcb06ebb364426055e3285 207 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13975 eb88fb6a83dcb06ebb364426055e3285 207 Pfam PF00005 ABC transporter 17 162 2.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 Pfam PF00455 DeoR C terminal sensor domain 79 234 1.8E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 SUPERFAMILY SSF46785 9 62 2.89E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 SUPERFAMILY SSF100950 81 235 4.29E-25 T 28-03-2018 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 Pfam PF08220 DeoR-like helix-turn-helix domain 11 64 2.1E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 SMART SM01134 76 237 5.3E-53 T 28-03-2018 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 Gene3D G3DSA:1.10.10.10 3 63 3.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 3.0E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 3.0E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 SMART SM00420 11 63 1.6E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00370 62cd4b2cbec781f26f12ac3f9b28c316 254 Gene3D G3DSA:3.40.50.1360 68 242 1.2E-32 T 28-03-2018 CO704_RS22245 de8008c771c8a9aeed1154355f9e1728 272 Gene3D G3DSA:3.40.50.300 3 252 6.4E-55 T 28-03-2018 CO704_RS22245 de8008c771c8a9aeed1154355f9e1728 272 SUPERFAMILY SSF52540 5 232 3.59E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22245 de8008c771c8a9aeed1154355f9e1728 272 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS22245 de8008c771c8a9aeed1154355f9e1728 272 Pfam PF00005 ABC transporter 24 170 1.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22245 de8008c771c8a9aeed1154355f9e1728 272 SMART SM00382 32 248 2.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 86 1.3E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 Gene3D G3DSA:1.20.1050.10 104 208 5.3E-14 T 28-03-2018 CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 Gene3D G3DSA:3.40.30.10 1 103 1.1E-19 T 28-03-2018 CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 SUPERFAMILY SSF52833 14 87 3.37E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 SUPERFAMILY SSF47616 90 208 2.73E-10 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS06445 250f8dfe0cb62d16926ebd95508794ff 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 96 211 2.4E-60 T 28-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CO704_RS14670 5e442872d7a48a9b2327f6fabdc88985 219 SMART SM00858 95 157 3.4E-9 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CO704_RS14670 5e442872d7a48a9b2327f6fabdc88985 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 29 215 7.7E-41 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CO704_RS14670 5e442872d7a48a9b2327f6fabdc88985 219 Gene3D G3DSA:3.90.1210.10 93 158 7.0E-11 T 28-03-2018 CO704_RS14670 5e442872d7a48a9b2327f6fabdc88985 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 8.2E-38 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CO704_RS03850 d909616e488030f7042a7a3a66734934 171 Pfam PF02631 RecX family 55 167 1.6E-33 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CO704_RS03850 d909616e488030f7042a7a3a66734934 171 Gene3D G3DSA:1.10.10.10 14 74 9.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03850 d909616e488030f7042a7a3a66734934 171 Gene3D G3DSA:1.10.10.10 121 171 3.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03850 d909616e488030f7042a7a3a66734934 171 Hamap MF_01114 Regulatory protein RecX [recX]. 3 171 14.091 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CO704_RS03850 d909616e488030f7042a7a3a66734934 171 Gene3D G3DSA:1.10.10.10 75 119 6.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11245 17c6c96b9aa15c386f768e4d05071d53 307 Gene3D G3DSA:3.40.1190.20 3 307 1.9E-70 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS11245 17c6c96b9aa15c386f768e4d05071d53 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS11245 17c6c96b9aa15c386f768e4d05071d53 307 SUPERFAMILY SSF53613 2 305 1.87E-83 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS11245 17c6c96b9aa15c386f768e4d05071d53 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS11245 17c6c96b9aa15c386f768e4d05071d53 307 Pfam PF00294 pfkB family carbohydrate kinase 5 298 8.7E-68 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 33 487 8.9E-57 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 Gene3D G3DSA:3.55.50.10 113 204 0.001 T 28-03-2018 CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 Gene3D G3DSA:2.40.50.260 373 477 5.9E-24 T 28-03-2018 CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 SUPERFAMILY SSF69279 14 184 1.02E-10 T 28-03-2018 CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 SUPERFAMILY SSF69255 370 450 6.54E-18 T 28-03-2018 CO704_RS09560 dfb4915db627d28639d333863e8ec749 596 SUPERFAMILY SSF69349 440 595 1.88E-6 T 28-03-2018 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.914 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.8E-156 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 Pfam PF01938 TRAM domain 378 440 8.9E-19 T 28-03-2018 IPR002792 TRAM domain CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 7.2E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 Gene3D G3DSA:3.80.30.20 144 381 4.9E-53 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 8.0E-213 T 28-03-2018 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 Pfam PF04055 Radical SAM superfamily 151 325 2.1E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 SUPERFAMILY SSF102114 126 372 1.31E-62 T 28-03-2018 CO704_RS17160 c3d7589b40a822bf2bca24cb190dfcb5 474 SMART SM00729 147 367 2.7E-63 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS21610 e853a45dee238d3f357cb1d6050c6af7 277 Gene3D G3DSA:3.40.50.150 137 261 9.3E-10 T 28-03-2018 CO704_RS21610 e853a45dee238d3f357cb1d6050c6af7 277 Pfam PF02384 N-6 DNA Methylase 137 238 9.5E-9 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CO704_RS21610 e853a45dee238d3f357cb1d6050c6af7 277 SUPERFAMILY SSF53335 118 236 3.44E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 PIRSF PIRSF006809 3 419 6.1E-148 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 SUPERFAMILY SSF52540 197 374 9.1E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 8.0E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 8.0E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 8.0E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 6.4E-28 T 28-03-2018 IPR032305 GTP-binding protein, middle domain CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Gene3D G3DSA:3.40.50.300 245 371 2.3E-11 T 28-03-2018 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 SUPERFAMILY SSF54980 365 421 1.44E-13 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 9.6E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.534 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 9.1E-153 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.0E-30 T 28-03-2018 IPR025121 GTPase HflX, N-terminal CO704_RS20965 1c34c5bcdffdc0f6ecb72e7d53caeb79 426 Gene3D G3DSA:3.40.50.300 12 244 6.3E-14 T 28-03-2018 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 PIRSF PIRSF039102 1 49 5.9E-8 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 PIRSF PIRSF039102 39 306 6.0E-96 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 2.9E-17 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 SUPERFAMILY SSF56059 97 302 6.9E-60 T 28-03-2018 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 8.8E-70 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.9E-109 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.901 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Gene3D G3DSA:3.30.470.20 172 305 1.4E-39 T 28-03-2018 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Gene3D G3DSA:3.40.50.20 1 96 4.8E-31 T 28-03-2018 CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 SUPERFAMILY SSF52440 3 96 5.18E-29 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS19630 1083e60cdaf3855ea6a9a5daf24e4c33 306 Gene3D G3DSA:3.30.1490.20 97 171 2.0E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.5E-184 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 Pfam PF00871 Acetokinase family 6 393 1.3E-174 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 6 17 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 325 341 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 302 315 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 176 189 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 206 227 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PRINTS PR00471 Acetate kinase family signature 380 392 3.7E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 SUPERFAMILY SSF53067 4 199 3.41E-62 T 28-03-2018 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 Gene3D G3DSA:3.30.420.40 5 198 4.4E-66 T 28-03-2018 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 PIRSF PIRSF000722 2 400 2.4E-141 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 183.663 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 SUPERFAMILY SSF53067 161 398 2.68E-83 T 28-03-2018 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CO704_RS06500 b8a4a966e9e42c72751984b1b1c26075 400 Gene3D G3DSA:3.30.420.40 199 400 8.1E-76 T 28-03-2018 CO704_RS08480 1ef0e8877382ca2005a3b4f209a26364 136 SUPERFAMILY SSF101116 8 127 9.16E-41 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS08480 1ef0e8877382ca2005a3b4f209a26364 136 Gene3D G3DSA:1.20.120.340 1 128 4.0E-42 T 28-03-2018 CO704_RS08480 1ef0e8877382ca2005a3b4f209a26364 136 Pfam PF02561 Flagellar protein FliS 8 125 7.7E-40 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS08480 1ef0e8877382ca2005a3b4f209a26364 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 126 1.7E-41 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS08480 1ef0e8877382ca2005a3b4f209a26364 136 PIRSF PIRSF039090 1 135 5.9E-44 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.1E-28 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.1E-28 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.1E-28 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.1E-28 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Pfam PF00206 Lyase 6 301 2.0E-98 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.4E-211 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.1E-24 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 SUPERFAMILY SSF48557 3 456 1.1E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.0E-68 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Gene3D G3DSA:1.10.40.30 376 433 2.3E-26 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Gene3D G3DSA:1.10.275.10 2 107 1.1E-31 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Gene3D G3DSA:1.20.200.10 108 375 9.8E-95 T 28-03-2018 CO704_RS23515 ecb5f27aed5b1a9138254425bdb33690 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.125 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 21.787 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 SUPERFAMILY SSF55144 6 176 6.8E-43 T 28-03-2018 IPR009097 Cyclic phosphodiesterase CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.6E-40 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 Pfam PF02834 LigT like Phosphoesterase 12 89 5.9E-12 T 28-03-2018 IPR014051 Phosphoesterase, HXTX CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 Pfam PF02834 LigT like Phosphoesterase 90 164 2.9E-7 T 28-03-2018 IPR014051 Phosphoesterase, HXTX CO704_RS19405 102c1725efbe68ae0c64c4361b6e0474 179 Gene3D G3DSA:3.90.1140.10 1 179 1.0E-31 T 28-03-2018 CO704_RS10800 a122fd9333b0cc9d265668a8e54bc8cf 308 Gene3D G3DSA:3.40.710.10 2 308 2.3E-123 T 28-03-2018 CO704_RS10800 a122fd9333b0cc9d265668a8e54bc8cf 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.043 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CO704_RS10800 a122fd9333b0cc9d265668a8e54bc8cf 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 6.1E-131 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CO704_RS10800 a122fd9333b0cc9d265668a8e54bc8cf 308 SUPERFAMILY SSF56601 6 308 1.88E-115 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS10800 a122fd9333b0cc9d265668a8e54bc8cf 308 Pfam PF04960 Glutaminase 24 308 2.0E-112 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Gene3D G3DSA:3.30.70.20 47 72 1.1E-8 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Gene3D G3DSA:3.30.70.20 73 103 0.12 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Gene3D G3DSA:3.30.70.20 142 162 1.2E-5 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 156 7.9E-52 T 28-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Gene3D G3DSA:3.30.70.20 104 141 5.7E-10 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 SUPERFAMILY SSF54862 23 158 1.7E-19 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Pfam PF13187 4Fe-4S dicluster domain 35 81 3.7E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Gene3D G3DSA:3.30.70.20 16 46 0.18 T 28-03-2018 CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 Pfam PF12838 4Fe-4S dicluster domain 107 154 8.6E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS05710 99f9edfbf044c0c68b870071e04f2b3d 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS07795 dfa1f6fae47ebc3fe7d1f0a42e807197 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 7.1E-88 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CO704_RS07795 dfa1f6fae47ebc3fe7d1f0a42e807197 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 43.804 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CO704_RS07795 dfa1f6fae47ebc3fe7d1f0a42e807197 236 Pfam PF01048 Phosphorylase superfamily 15 223 1.0E-29 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS07795 dfa1f6fae47ebc3fe7d1f0a42e807197 236 Gene3D G3DSA:3.40.50.1580 8 235 4.0E-46 T 28-03-2018 CO704_RS07795 dfa1f6fae47ebc3fe7d1f0a42e807197 236 SUPERFAMILY SSF53167 1 233 7.59E-83 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 SUPERFAMILY SSF50447 172 290 1.25E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Pfam PF03144 Elongation factor Tu domain 2 186 253 2.4E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 SUPERFAMILY SSF46785 414 482 2.58E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:2.40.30.10 278 332 3.4E-7 T 28-03-2018 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 SUPERFAMILY SSF46785 553 604 1.25E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:2.40.30.10 168 277 8.8E-22 T 28-03-2018 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 604 1.2E-229 T 28-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 157 4.3E-12 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 SUPERFAMILY SSF52540 2 165 2.31E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Pfam PF09106 Elongation factor SelB, winged helix 421 477 3.4E-16 T 28-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:3.40.50.300 1 167 1.5E-31 T 28-03-2018 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Pfam PF00009 Elongation factor Tu GTP binding domain 2 153 3.0E-31 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:1.10.10.10 414 477 8.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:1.10.10.10 545 603 7.3E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 SUPERFAMILY SSF46785 485 543 1.12E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Gene3D G3DSA:1.10.10.10 486 542 1.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 Pfam PF09107 Elongation factor SelB, winged helix 559 602 7.5E-20 T 28-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS00195 536fc4a368eb2f873a541789312c9a91 612 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 Pfam PF13478 XdhC Rossmann domain 106 247 4.1E-31 T 28-03-2018 IPR027051 XdhC Rossmann domain CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 4.4E-118 T 28-03-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 Gene3D G3DSA:3.40.50.720 197 367 3.0E-5 T 28-03-2018 CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 Pfam PF02625 XdhC and CoxI family 12 73 5.8E-18 T 28-03-2018 IPR003777 XdhC- CoxI CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 Gene3D G3DSA:3.40.50.20 104 196 1.4E-5 T 28-03-2018 CO704_RS10995 4bbd086c1d12eb40a47426059f3c35a0 541 Gene3D G3DSA:2.40.50.100 428 498 3.4E-4 T 28-03-2018 CO704_RS23175 e479022a54115b1ca451d8e7f70b3ed2 206 PIRSF PIRSF006324 1 206 2.4E-40 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS23175 e479022a54115b1ca451d8e7f70b3ed2 206 Pfam PF01810 LysE type translocator 14 205 3.4E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS23175 e479022a54115b1ca451d8e7f70b3ed2 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 1.5E-65 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 2.8E-147 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 Gene3D G3DSA:2.40.40.20 275 337 5.5E-21 T 28-03-2018 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 2.3E-161 T 28-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 SUPERFAMILY SSF55729 1 337 3.27E-136 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.2E-151 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 Gene3D G3DSA:3.40.630.30 1 274 1.3E-24 T 28-03-2018 CO704_RS13935 617054f76f00fd7052e165a88cb9e42f 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 343 71.011 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CO704_RS25400 634b416d6238fbed55003ca045af7d81 527 Pfam PF13688 Metallo-peptidase family M12 99 281 1.0E-6 T 28-03-2018 CO704_RS25400 634b416d6238fbed55003ca045af7d81 527 SUPERFAMILY SSF55486 78 290 8.86E-8 T 28-03-2018 CO704_RS25400 634b416d6238fbed55003ca045af7d81 527 Gene3D G3DSA:3.40.390.10 63 305 5.6E-5 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 354 9.9E-120 T 28-03-2018 IPR011757 Lytic transglycosylase MltB CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 SUPERFAMILY SSF53955 47 355 1.08E-91 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 Gene3D G3DSA:1.10.530.10 240 360 9.3E-31 T 28-03-2018 CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 Gene3D G3DSA:1.10.8.350 128 234 4.1E-34 T 28-03-2018 CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 Gene3D G3DSA:1.10.8.350 51 127 4.7E-8 T 28-03-2018 CO704_RS03785 c96b7ba24c76042e1a0eec327542e667 360 Pfam PF13406 Transglycosylase SLT domain 56 352 7.5E-90 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 Pfam PF01479 S4 domain 8 50 3.8E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 SUPERFAMILY SSF55174 7 62 3.36E-13 T 28-03-2018 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 Gene3D G3DSA:3.30.70.1560 145 212 3.7E-23 T 28-03-2018 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 Gene3D G3DSA:3.30.70.580 65 144 4.3E-17 T 28-03-2018 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 Gene3D G3DSA:3.10.290.10 4 64 1.4E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 SUPERFAMILY SSF55120 69 229 6.17E-38 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 Pfam PF00849 RNA pseudouridylate synthase 69 195 9.3E-15 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 SMART SM00363 7 63 3.7E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS22765 f9969b679eaee63f0eebebf72a211ce1 292 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 2.3E-53 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 Pfam PF00156 Phosphoribosyl transferase domain 285 394 5.9E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 SUPERFAMILY SSF53271 252 485 3.54E-72 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 Gene3D G3DSA:3.40.50.2020 280 446 1.6E-38 T 28-03-2018 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 3.8E-162 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 SUPERFAMILY SSF56235 2 259 1.37E-74 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 Gene3D G3DSA:3.60.20.10 45 279 9.6E-56 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 Pfam PF13522 Glutamine amidotransferase domain 64 208 6.2E-16 T 28-03-2018 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.967 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CO704_RS06375 e9977a27694fddc9b26ab1d56c789e44 505 PIRSF PIRSF000485 1 483 3.7E-173 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 4.9E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08405 99c7878595a32f00d0047334765cf979 334 SUPERFAMILY SSF101801 250 323 2.22E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08405 99c7878595a32f00d0047334765cf979 334 Gene3D G3DSA:3.40.1550.10 46 234 3.8E-38 T 28-03-2018 IPR028976 CheC-like domain CO704_RS08405 99c7878595a32f00d0047334765cf979 334 SUPERFAMILY SSF103039 49 231 1.78E-18 T 28-03-2018 IPR028976 CheC-like domain CO704_RS08405 99c7878595a32f00d0047334765cf979 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 4.2E-116 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 PIRSF PIRSF002888 2 331 2.4E-99 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 4.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 4.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 4.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 4.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS08405 99c7878595a32f00d0047334765cf979 334 Gene3D G3DSA:2.30.330.10 239 329 3.0E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08405 99c7878595a32f00d0047334765cf979 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 2.2E-78 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CO704_RS20040 f32fc97ec506c449c08b7a8ef63fb13c 172 SUPERFAMILY SSF52972 2 168 2.79E-54 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS20040 f32fc97ec506c449c08b7a8ef63fb13c 172 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 4.2E-61 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase CO704_RS20040 f32fc97ec506c449c08b7a8ef63fb13c 172 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 170 28.138 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase CO704_RS20040 f32fc97ec506c449c08b7a8ef63fb13c 172 Pfam PF01931 Protein of unknown function DUF84 7 165 3.4E-50 T 28-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CO704_RS20040 f32fc97ec506c449c08b7a8ef63fb13c 172 Gene3D G3DSA:3.90.950.10 1 170 5.9E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS09145 1860fba32278253683ed51781ac19bc3 532 SMART SM00052 265 506 3.5E-103 T 28-03-2018 IPR001633 EAL domain CO704_RS09145 1860fba32278253683ed51781ac19bc3 532 SUPERFAMILY SSF141868 273 515 2.22E-70 T 28-03-2018 IPR001633 EAL domain CO704_RS09145 1860fba32278253683ed51781ac19bc3 532 Gene3D G3DSA:3.20.20.450 261 516 7.7E-75 T 28-03-2018 IPR001633 EAL domain CO704_RS09145 1860fba32278253683ed51781ac19bc3 532 Pfam PF00563 EAL domain 276 501 2.6E-60 T 28-03-2018 IPR001633 EAL domain CO704_RS09145 1860fba32278253683ed51781ac19bc3 532 Pfam PF12792 CSS motif domain associated with EAL 44 234 4.2E-28 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Gene3D G3DSA:3.40.1110.10 293 538 2.4E-36 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 351 5.6E-40 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 601 725 7.5E-37 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF81653 120 229 3.14E-29 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Pfam PF00122 E1-E2 ATPase 117 310 2.1E-52 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Gene3D G3DSA:2.70.150.10 22 230 7.2E-48 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF81665 230 324 1.7E-118 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF81665 8 120 1.7E-118 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF81665 682 894 1.7E-118 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Pfam PF00702 haloacid dehalogenase-like hydrolase 528 646 4.7E-16 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 489 507 7.9E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 7.9E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 7.9E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 7.9E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Gene3D G3DSA:1.20.1110.10 562 896 6.6E-82 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF81660 337 535 4.41E-42 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 542 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 563 3.2E-41 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Pfam PF13246 Cation transport ATPase (P-type) 393 474 2.5E-11 T 28-03-2018 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Pfam PF00689 Cation transporting ATPase, C-terminus 717 888 3.9E-39 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF56784 328 348 4.99E-58 T 28-03-2018 IPR023214 HAD-like domain CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SUPERFAMILY SSF56784 486 735 4.99E-58 T 28-03-2018 IPR023214 HAD-like domain CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 SMART SM00831 9 82 6.1E-29 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS04260 47ac2ec38a3071785177b757c692a59d 897 Pfam PF00690 Cation transporter/ATPase, N-terminus 10 76 1.2E-18 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 SMART SM00382 35 178 4.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 39 52 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 227 236 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 101 116 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 Gene3D G3DSA:3.40.50.300 13 187 3.9E-23 T 28-03-2018 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 SUPERFAMILY SSF46689 227 334 1.93E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 319 339 4.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 302 319 4.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 Pfam PF00158 Sigma-54 interaction domain 20 182 6.4E-65 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 SUPERFAMILY SSF52540 22 255 8.1E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 Pfam PF02954 Bacterial regulatory protein, Fis family 298 334 5.4E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 Gene3D G3DSA:1.10.10.60 284 334 9.0E-10 T 28-03-2018 CO704_RS17545 37fdb805937ce0ab65a8b16572cd7ea3 347 Gene3D G3DSA:1.10.8.60 188 283 1.5E-22 T 28-03-2018 CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 435 551 5.5E-18 T 28-03-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 56 270 2.5E-61 T 28-03-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 Gene3D G3DSA:1.10.10.10 431 454 0.002 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 Pfam PF07514 Putative helicase 57 268 1.2E-24 T 28-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 Gene3D G3DSA:2.40.10.200 455 551 2.6E-18 T 28-03-2018 CO704_RS21440 258ec71ba5a7943df1d3e9c45c9cc7c8 553 SUPERFAMILY SSF46785 434 552 3.81E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 7.4E-18 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 SUPERFAMILY SSF56784 1 264 1.5E-61 T 28-03-2018 IPR023214 HAD-like domain CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 28-03-2018 CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 2.2E-56 T 28-03-2018 IPR000150 Cof family GO:0016787 CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.6E-52 T 28-03-2018 IPR023214 HAD-like domain CO704_RS15925 4457e20eb4bc57a5e7db616dbb439a04 270 Gene3D G3DSA:3.40.50.1000 1 268 2.2E-35 T 28-03-2018 IPR023214 HAD-like domain CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Gene3D G3DSA:1.20.5.740 344 359 7.4E-14 T 28-03-2018 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Gene3D G3DSA:3.40.50.1220 193 343 1.8E-29 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Gene3D G3DSA:3.40.50.970 8 192 1.2E-45 T 28-03-2018 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 3.1E-267 T 28-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 5.8E-28 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 176 5.7E-50 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Gene3D G3DSA:3.40.50.970 360 555 2.5E-35 T 28-03-2018 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 3.1E-38 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 SUPERFAMILY SSF52467 191 359 3.68E-38 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 SUPERFAMILY SSF52518 371 550 1.77E-50 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS12745 6d35b11a5ce13fc6f5d354527db46de3 559 SUPERFAMILY SSF52518 12 177 7.7E-46 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS00880 a654ed3777e0a828650c105a130340b0 390 SUPERFAMILY SSF51419 34 268 1.99E-21 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS00880 a654ed3777e0a828650c105a130340b0 390 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 1.3E-20 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS00880 a654ed3777e0a828650c105a130340b0 390 Gene3D G3DSA:3.20.20.10 28 270 9.4E-27 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 SUPERFAMILY SSF51735 283 574 2.53E-96 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 Gene3D G3DSA:3.40.50.10380 27 280 9.2E-113 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PIRSF PIRSF000106 3 575 6.5E-229 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 Pfam PF00390 Malic enzyme, N-terminal domain 93 273 1.7E-79 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 SUPERFAMILY SSF53223 15 282 5.18E-110 T 28-03-2018 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 ProSitePatterns PS00331 Malic enzymes signature. 279 295 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 Pfam PF03949 Malic enzyme, NAD binding domain 283 542 6.7E-105 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 Gene3D G3DSA:3.40.50.720 281 577 5.5E-107 T 28-03-2018 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 SMART SM00919 283 543 1.6E-135 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 16 577 72.307 T 28-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 SMART SM01274 93 273 2.7E-108 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 159 188 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 420 436 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 195 217 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 254 272 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 99 123 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 310 326 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS11250 8c09f9776e005718a71bf4e66a480be2 577 PRINTS PR00072 Malic enzyme signature 279 295 1.0E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CO704_RS14190 12b4013f52a701c39846a45b3066b565 282 SUPERFAMILY SSF56281 5 258 5.6E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS14190 12b4013f52a701c39846a45b3066b565 282 Gene3D G3DSA:3.60.15.10 15 228 4.4E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS14190 12b4013f52a701c39846a45b3066b565 282 Pfam PF00753 Metallo-beta-lactamase superfamily 33 218 7.9E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS14190 12b4013f52a701c39846a45b3066b565 282 SMART SM00849 36 218 5.0E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS09735 b2215b4f5c36bdf90ae117298944e860 463 Pfam PF07690 Major Facilitator Superfamily 46 422 1.4E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS09735 b2215b4f5c36bdf90ae117298944e860 463 Gene3D G3DSA:1.20.1250.20 17 236 6.7E-13 T 28-03-2018 CO704_RS09735 b2215b4f5c36bdf90ae117298944e860 463 Gene3D G3DSA:1.20.1250.20 244 463 6.3E-19 T 28-03-2018 CO704_RS09735 b2215b4f5c36bdf90ae117298944e860 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 1.3E-108 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CO704_RS09735 b2215b4f5c36bdf90ae117298944e860 463 SUPERFAMILY SSF103473 20 459 3.14E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 Pfam PF03466 LysR substrate binding domain 86 288 6.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 Gene3D G3DSA:3.40.190.10 174 262 4.2E-16 T 28-03-2018 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 SUPERFAMILY SSF46785 2 108 4.95E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 Gene3D G3DSA:3.40.190.10 88 173 1.3E-20 T 28-03-2018 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 SUPERFAMILY SSF53850 88 291 5.27E-39 T 28-03-2018 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 Gene3D G3DSA:1.10.10.10 1 87 2.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23150 6a4ab7025c21a03fb19601e7a08a5d73 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 SUPERFAMILY SSF51569 1 315 1.01E-111 T 28-03-2018 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 Gene3D G3DSA:3.20.20.70 1 316 3.2E-115 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 6.5E-157 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 310 4.3E-99 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS05750 96f03df2bcbdc8422d22f9c805d4ada6 316 Hamap MF_00492 Transaldolase [tal]. 1 316 52.401 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 SUPERFAMILY SSF52402 5 245 3.31E-58 T 28-03-2018 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 Gene3D G3DSA:3.40.50.620 1 213 2.8E-66 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 Pfam PF03054 tRNA methyl transferase 7 361 1.7E-144 T 28-03-2018 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 Gene3D G3DSA:2.40.30.10 283 367 1.6E-27 T 28-03-2018 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 3.7E-158 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 41.008 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CO704_RS14270 0f6ec0be6ba57948ffecc2d5b4288585 369 Gene3D G3DSA:2.30.30.280 214 281 1.2E-29 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CO704_RS09420 70cf13a4bc44dde24e128508cc987287 519 Gene3D G3DSA:1.20.200.10 207 518 4.3E-108 T 28-03-2018 CO704_RS09420 70cf13a4bc44dde24e128508cc987287 519 Pfam PF00221 Aromatic amino acid lyase 23 477 2.0E-159 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CO704_RS09420 70cf13a4bc44dde24e128508cc987287 519 Gene3D G3DSA:1.10.275.10 6 204 3.3E-55 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CO704_RS09420 70cf13a4bc44dde24e128508cc987287 519 SUPERFAMILY SSF48557 10 506 1.33E-153 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 Gene3D G3DSA:1.10.10.60 209 255 6.5E-7 T 28-03-2018 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 SUPERFAMILY SSF51182 29 215 1.29E-8 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 Gene3D G3DSA:2.60.120.10 6 108 2.0E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 SUPERFAMILY SSF46689 207 252 7.53E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 Pfam PF12833 Helix-turn-helix domain 178 251 4.9E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 Gene3D G3DSA:1.10.10.60 109 208 4.0E-10 T 28-03-2018 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 SMART SM00342 171 253 3.2E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03240 7a85738c424d5ead48aa4fea58418dd8 257 Pfam PF02311 AraC-like ligand binding domain 24 116 7.7E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 SUPERFAMILY SSF55920 170 398 5.36E-50 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 Gene3D G3DSA:3.90.230.10 157 401 7.7E-48 T 28-03-2018 CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 Gene3D G3DSA:3.40.350.10 11 156 9.9E-16 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 Pfam PF00557 Metallopeptidase family M24 182 384 4.0E-36 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 SUPERFAMILY SSF53092 11 171 7.32E-16 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CO704_RS05065 5b0ce906b2ab45fca305bbff5545a717 401 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 173 8.9E-21 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 Gene3D G3DSA:3.20.20.140 65 400 2.7E-70 T 28-03-2018 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 Gene3D G3DSA:2.30.40.10 2 64 2.3E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 SUPERFAMILY SSF51338 417 475 4.75E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 Pfam PF07969 Amidohydrolase family 335 459 2.1E-16 T 28-03-2018 IPR013108 Amidohydrolase 3 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 Pfam PF07969 Amidohydrolase family 46 282 2.0E-23 T 28-03-2018 IPR013108 Amidohydrolase 3 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 Gene3D G3DSA:2.30.40.10 401 478 2.4E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 SUPERFAMILY SSF51338 3 70 3.12E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS22270 bfb9ec0872862cda6b08b7128ea26f72 478 SUPERFAMILY SSF51556 57 415 3.57E-83 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 Pfam PF00581 Rhodanese-like domain 4 115 9.6E-9 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 Pfam PF00581 Rhodanese-like domain 153 261 8.7E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 SUPERFAMILY SSF52821 157 269 7.07E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 SMART SM00450 4 119 1.1E-6 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 SMART SM00450 143 265 2.4E-13 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 SUPERFAMILY SSF52821 2 120 6.16E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 Gene3D G3DSA:3.40.250.10 1 132 6.5E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11530 e1f182bbcace9e1f45e9a1be2255b163 272 Gene3D G3DSA:3.40.250.10 149 271 2.4E-24 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS19795 0c32864d5c70880b41a89f5a04ba05e8 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 1.6E-128 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CO704_RS19795 0c32864d5c70880b41a89f5a04ba05e8 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 5.6E-106 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CO704_RS19795 0c32864d5c70880b41a89f5a04ba05e8 329 SUPERFAMILY SSF53659 6 327 2.58E-115 T 28-03-2018 CO704_RS19795 0c32864d5c70880b41a89f5a04ba05e8 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 34.998 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CO704_RS19795 0c32864d5c70880b41a89f5a04ba05e8 329 Gene3D G3DSA:3.40.718.10 2 329 1.9E-129 T 28-03-2018 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.315 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.7E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 Gene3D G3DSA:3.30.360.10 144 351 8.6E-61 T 28-03-2018 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 7.3E-221 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 Gene3D G3DSA:3.40.50.720 1 143 5.4E-18 T 28-03-2018 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 1.0E-60 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 PIRSF PIRSF000148 1 368 1.4E-70 T 28-03-2018 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 SUPERFAMILY SSF51735 1 148 6.41E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 SMART SM00859 3 123 1.0E-25 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS00645 3f2ed7f1de64b789d57eceaddfede508 368 SUPERFAMILY SSF55347 135 355 4.46E-78 T 28-03-2018 CO704_RS08765 9eb666fc0db9567cf839b3a9f42c08ef 129 SUPERFAMILY SSF52172 5 125 5.27E-35 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS08765 9eb666fc0db9567cf839b3a9f42c08ef 129 SMART SM00448 6 120 1.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08765 9eb666fc0db9567cf839b3a9f42c08ef 129 Gene3D G3DSA:3.40.50.2300 1 128 6.0E-35 T 28-03-2018 CO704_RS08765 9eb666fc0db9567cf839b3a9f42c08ef 129 Pfam PF00072 Response regulator receiver domain 9 120 7.8E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 1.9E-26 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 Gene3D G3DSA:3.40.50.1010 3 173 1.9E-39 T 28-03-2018 IPR029060 PIN domain-like CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 45.942 T 28-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 SMART SM00475 3 250 5.2E-94 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 SMART SM00279 162 197 2.3E-10 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 157 2.7E-28 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 SUPERFAMILY SSF88723 4 159 1.14E-36 T 28-03-2018 IPR029060 PIN domain-like CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 Gene3D G3DSA:1.10.150.20 174 251 1.1E-24 T 28-03-2018 CO704_RS03470 2d5e841ede537cf8708af1e357dec718 256 SUPERFAMILY SSF47807 159 252 7.18E-25 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 Pfam PF00551 Formyl transferase 86 262 3.8E-53 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 SUPERFAMILY SSF55021 6 56 5.0E-9 T 28-03-2018 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 Pfam PF01842 ACT domain 8 68 2.4E-7 T 28-03-2018 IPR002912 ACT domain CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 45.967 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 Gene3D G3DSA:3.30.70.260 5 78 2.1E-8 T 28-03-2018 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PIRSF PIRSF036480 4 280 8.0E-114 T 28-03-2018 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 280 1.3E-130 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 Gene3D G3DSA:3.40.50.170 85 280 3.8E-52 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 SUPERFAMILY SSF53328 86 279 4.71E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS09810 c807328142f429a03c80fa085c7f7146 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 3.0E-69 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 Gene3D G3DSA:1.10.10.60 209 248 3.1E-12 T 28-03-2018 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 Gene3D G3DSA:3.40.50.880 2 208 1.4E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS12090 8143015163905e13d0623b3c4286b046 300 SMART SM00342 206 289 5.0E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 SUPERFAMILY SSF52317 6 172 3.23E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS12090 8143015163905e13d0623b3c4286b046 300 Pfam PF01965 DJ-1/PfpI family 21 151 7.1E-17 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS12090 8143015163905e13d0623b3c4286b046 300 Gene3D G3DSA:1.10.10.60 249 300 2.0E-10 T 28-03-2018 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 SUPERFAMILY SSF46689 242 293 3.94E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 Pfam PF12833 Helix-turn-helix domain 212 291 3.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS12090 8143015163905e13d0623b3c4286b046 300 SUPERFAMILY SSF46689 189 237 2.51E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 1.7E-21 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 454 1.5E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Gene3D G3DSA:3.40.120.10 160 267 6.6E-33 T 28-03-2018 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Gene3D G3DSA:3.40.120.10 1 159 1.6E-40 T 28-03-2018 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 5.1E-33 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 9.6E-25 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 SUPERFAMILY SSF55957 374 456 4.01E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 6.0E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 6.0E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 6.0E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 6.0E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 SUPERFAMILY SSF53738 152 261 1.81E-27 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 SUPERFAMILY SSF53738 263 368 2.98E-33 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Gene3D G3DSA:3.30.310.50 378 456 2.5E-15 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 Gene3D G3DSA:3.40.120.10 268 376 9.1E-28 T 28-03-2018 CO704_RS07505 727d17a3e4f289a335377ec5c6c0d8bb 456 SUPERFAMILY SSF53738 3 176 9.81E-39 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17500 ceeb996ecac573269013d10a0bc8f415 145 Gene3D G3DSA:1.20.58.300 6 134 6.6E-23 T 28-03-2018 CO704_RS17500 ceeb996ecac573269013d10a0bc8f415 145 SUPERFAMILY SSF140566 8 133 3.53E-25 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CO704_RS17500 ceeb996ecac573269013d10a0bc8f415 145 Pfam PF05130 FlgN protein 8 133 2.6E-17 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 SMART SM00650 25 198 4.7E-86 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 SUPERFAMILY SSF53335 17 266 1.31E-78 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 2.3E-85 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 1.2E-89 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 Gene3D G3DSA:1.10.8.100 203 264 9.0E-19 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.678 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CO704_RS19800 8e042f431db0e597a3a96b96694a1e39 274 Gene3D G3DSA:3.40.50.150 4 201 2.0E-40 T 28-03-2018 CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Pfam PF03741 Integral membrane protein TerC family 14 203 7.4E-50 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Pfam PF03471 Transporter associated domain 439 515 5.2E-21 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Gene3D G3DSA:3.30.465.10 435 517 3.8E-23 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Pfam PF00571 CBS domain 373 421 3.3E-7 T 28-03-2018 IPR000644 CBS domain CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Pfam PF00571 CBS domain 305 357 3.3E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 SMART SM01091 438 517 3.3E-26 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 SUPERFAMILY SSF54631 291 423 6.22E-26 T 28-03-2018 CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 SUPERFAMILY SSF56176 436 520 2.4E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS07430 522846e9029c923cdc646198e5e9e45c 527 Gene3D G3DSA:3.10.580.10 284 434 7.5E-28 T 28-03-2018 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 PRINTS PR00839 V8 serine protease family signature 65 82 2.5E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 PRINTS PR00839 V8 serine protease family signature 208 224 2.5E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 PRINTS PR00839 V8 serine protease family signature 40 57 2.5E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 PRINTS PR00839 V8 serine protease family signature 228 240 2.5E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 PRINTS PR00839 V8 serine protease family signature 174 187 2.5E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 213 224 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 Pfam PF00089 Trypsin 44 240 8.2E-8 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 Gene3D G3DSA:2.40.10.10 71 184 9.9E-5 T 28-03-2018 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 SUPERFAMILY SSF50494 26 263 6.42E-29 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 76 81 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 Gene3D G3DSA:2.40.10.10 42 70 2.2E-6 T 28-03-2018 CO704_RS12675 e2a2b9de353e3277f44246463fe5dc05 268 Gene3D G3DSA:2.40.10.10 185 268 1.2E-9 T 28-03-2018 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 9.1E-16 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24110 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS08625 f68a31c511c62b47b245ce15d8e427d0 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.7E-15 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CO704_RS08625 f68a31c511c62b47b245ce15d8e427d0 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 391 4.0E-57 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 1.2E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 Gene3D G3DSA:1.10.10.10 1 69 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 SUPERFAMILY SSF48008 82 214 4.71E-16 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 SMART SM00895 84 207 6.1E-10 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 Pfam PF07729 FCD domain 84 205 5.1E-16 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 SMART SM00345 16 74 5.8E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 SUPERFAMILY SSF46785 6 101 4.76E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11495 3e4974ceae4d2914b56d7c1f7d0ef4bf 218 Gene3D G3DSA:1.20.120.530 70 216 1.1E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS25650 0f432bba7de2d751180c53e6ab66541b 559 Pfam PF00535 Glycosyl transferase family 2 8 130 3.5E-19 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS25650 0f432bba7de2d751180c53e6ab66541b 559 Gene3D G3DSA:3.90.550.10 8 254 1.6E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS25650 0f432bba7de2d751180c53e6ab66541b 559 SUPERFAMILY SSF53448 8 240 7.16E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:1.20.1640.10 853 1048 5.6E-36 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:1.20.1640.10 279 501 5.2E-51 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82693 277 333 1.34E-26 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82693 139 184 1.34E-26 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:3.30.70.1430 40 142 1.0E-26 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1045 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82866 299 499 7.85E-51 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82693 41 134 1.18E-26 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:3.30.70.1320 774 852 5.9E-8 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82714 185 275 2.75E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82866 813 1036 9.55E-42 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:3.30.2090.10 183 278 4.9E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:3.30.70.1430 578 678 8.1E-16 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Gene3D G3DSA:3.30.70.1440 679 773 1.3E-21 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82693 575 678 3.5E-22 T 28-03-2018 CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 SUPERFAMILY SSF82714 729 815 1.44E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04115 5d7d36c6ae72b49509ba8d254cc6ce9a 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS15855 3e3a54a9706ad1190c5be7b69b59d6ea 281 SUPERFAMILY SSF161098 8 266 1.03E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15855 3e3a54a9706ad1190c5be7b69b59d6ea 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 5.9E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15855 3e3a54a9706ad1190c5be7b69b59d6ea 281 Gene3D G3DSA:1.10.3720.10 11 273 8.0E-41 T 28-03-2018 CO704_RS14855 83e28912bdc94ba8653d16c6c10ed9dc 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 5.1E-80 T 28-03-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CO704_RS14855 83e28912bdc94ba8653d16c6c10ed9dc 277 Gene3D G3DSA:3.40.50.10070 37 210 2.3E-19 T 28-03-2018 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.7E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.7E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 6.7E-26 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 Gene3D G3DSA:2.10.109.10 76 320 1.9E-57 T 28-03-2018 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 304 5.7E-43 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 Pfam PF10502 Signal peptidase, peptidase S26 258 302 2.6E-7 T 28-03-2018 IPR019533 Peptidase S26 CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 Pfam PF00717 Peptidase S24-like 86 159 9.1E-21 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS04605 14cd83116e9c0baf44e9db47efcfe2b0 324 SUPERFAMILY SSF51306 78 323 2.51E-82 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS02500 947056f2d1d7f1ec834e9fe6c468d8d9 251 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 8.3E-48 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CO704_RS02500 947056f2d1d7f1ec834e9fe6c468d8d9 251 SMART SM00563 67 182 2.0E-39 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS02500 947056f2d1d7f1ec834e9fe6c468d8d9 251 Gene3D G3DSA:3.40.1130.10 30 251 1.0E-39 T 28-03-2018 CO704_RS02500 947056f2d1d7f1ec834e9fe6c468d8d9 251 SUPERFAMILY SSF69593 2 241 1.7E-59 T 28-03-2018 CO704_RS02500 947056f2d1d7f1ec834e9fe6c468d8d9 251 Pfam PF01553 Acyltransferase 64 180 1.5E-31 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS16295 15d6b978de7d933ce7d05424a4c24edb 184 Pfam PF13420 Acetyltransferase (GNAT) domain 14 170 1.1E-18 T 28-03-2018 CO704_RS16295 15d6b978de7d933ce7d05424a4c24edb 184 SUPERFAMILY SSF55729 12 176 9.45E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS16295 15d6b978de7d933ce7d05424a4c24edb 184 Gene3D G3DSA:3.40.630.30 10 180 9.0E-32 T 28-03-2018 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 SUPERFAMILY SSF56300 19 353 3.61E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 SUPERFAMILY SSF55816 355 593 2.35E-41 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 Gene3D G3DSA:3.90.780.10 377 600 4.0E-51 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 6.7E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 643 0.0 T 28-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 22 40 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 428 451 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 530 549 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 283 303 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 243 266 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 PRINTS PR01607 Apyrase family signature 215 232 1.2E-31 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 Gene3D G3DSA:3.60.21.10 12 376 8.4E-82 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS20795 561ffba10e69525f47bb066b0d7fa196 643 Pfam PF02872 5'-nucleotidase, C-terminal domain 356 550 8.7E-22 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS17390 b3564c69990bfa13190d9702a2c0e61e 131 TIGRFAM TIGR00208 fliS: flagellar protein FliS 11 127 1.2E-25 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS17390 b3564c69990bfa13190d9702a2c0e61e 131 PIRSF PIRSF039090 3 131 2.1E-40 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS17390 b3564c69990bfa13190d9702a2c0e61e 131 Gene3D G3DSA:1.20.120.340 3 130 9.2E-36 T 28-03-2018 CO704_RS17390 b3564c69990bfa13190d9702a2c0e61e 131 Pfam PF02561 Flagellar protein FliS 11 126 1.1E-32 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS17390 b3564c69990bfa13190d9702a2c0e61e 131 SUPERFAMILY SSF101116 11 129 1.23E-35 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 SUPERFAMILY SSF56762 228 603 1.03E-118 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 SUPERFAMILY SSF143243 28 232 1.29E-58 T 28-03-2018 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 255 266 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 108 163 4.0E-23 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 332 603 5.9E-102 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Gene3D G3DSA:1.10.645.10 216 388 1.3E-44 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Gene3D G3DSA:1.10.645.10 395 599 1.6E-30 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 19 603 72.579 T 28-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 214 603 41.866 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 218 603 4.8E-176 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 52 179 2.3E-44 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06555 ac172823bfee6a58e54af6c711867d88 603 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 53 180 2.6E-41 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Gene3D G3DSA:3.40.1190.10 105 342 1.8E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Gene3D G3DSA:3.40.1390.10 2 104 6.9E-24 T 28-03-2018 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.583 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 SUPERFAMILY SSF53623 105 337 3.14E-78 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 1.0E-165 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 6.3E-26 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Gene3D G3DSA:3.90.190.20 343 494 4.8E-49 T 28-03-2018 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Pfam PF08245 Mur ligase middle domain 114 318 1.2E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 SUPERFAMILY SSF63418 5 103 3.01E-23 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 SUPERFAMILY SSF53244 339 491 2.75E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19665 a84ed8b0d917ead08b06e77fbad07e52 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 3.9E-12 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 3.7E-45 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 7.9E-21 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.4E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Gene3D G3DSA:3.40.120.10 3 154 4.7E-48 T 28-03-2018 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 48.153 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.8E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.8E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.8E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Gene3D G3DSA:3.30.310.50 374 445 8.5E-18 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 SUPERFAMILY SSF55957 357 444 1.83E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Gene3D G3DSA:3.40.120.10 155 267 3.4E-33 T 28-03-2018 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 SUPERFAMILY SSF53738 156 255 7.85E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 8.1E-198 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 SUPERFAMILY SSF53738 258 365 7.06E-30 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 6.4E-31 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 SUPERFAMILY SSF53738 2 181 4.32E-49 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS01775 417143304a0e093fad41e04355685e4e 445 Gene3D G3DSA:3.40.120.10 268 373 1.2E-27 T 28-03-2018 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 SUPERFAMILY SSF52540 35 221 1.86E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 499 639 4.6E-58 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Gene3D G3DSA:3.40.50.300 1 166 1.6E-39 T 28-03-2018 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.1E-41 T 28-03-2018 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 SMART SM00382 37 178 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Gene3D G3DSA:1.20.272.10 243 363 1.3E-14 T 28-03-2018 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Gene3D G3DSA:1.10.8.60 167 242 2.5E-20 T 28-03-2018 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 7.2E-32 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 7.0E-133 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 SUPERFAMILY SSF48019 243 365 3.06E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CO704_RS05395 f7877e62fc126f53327208e3332cf3fa 642 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 497 5.9E-19 T 28-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 Pfam PF01895 PhoU domain 27 111 4.4E-21 T 28-03-2018 IPR026022 PhoU domain CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 Pfam PF01895 PhoU domain 128 213 2.0E-17 T 28-03-2018 IPR026022 PhoU domain CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 PIRSF PIRSF003107 7 226 1.8E-67 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 Gene3D G3DSA:1.20.58.220 120 238 7.5E-26 T 28-03-2018 CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 8.2E-73 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 Gene3D G3DSA:1.20.58.220 6 119 3.5E-28 T 28-03-2018 CO704_RS24175 04da1410d0b24c50a2a6e2d9e1883348 241 SUPERFAMILY SSF109755 13 229 5.44E-70 T 28-03-2018 CO704_RS06665 3be0c6032123e2d969d9d0c6b48eb31d 180 SUPERFAMILY SSF56935 23 179 7.51E-8 T 28-03-2018 CO704_RS06665 3be0c6032123e2d969d9d0c6b48eb31d 180 Pfam PF07437 YfaZ precursor 1 180 8.5E-69 T 28-03-2018 IPR009998 YfaZ CO704_RS06665 3be0c6032123e2d969d9d0c6b48eb31d 180 Gene3D G3DSA:2.40.128.130 13 82 0.18 T 28-03-2018 CO704_RS06665 3be0c6032123e2d969d9d0c6b48eb31d 180 Gene3D G3DSA:2.40.128.130 83 131 6.3E-4 T 28-03-2018 CO704_RS06665 3be0c6032123e2d969d9d0c6b48eb31d 180 Gene3D G3DSA:2.40.160.20 132 180 8.9E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS04370 9e3e0b58d3209b4dddc1053c4fa96e24 292 Gene3D G3DSA:2.60.200.30 142 264 2.3E-39 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CO704_RS04370 9e3e0b58d3209b4dddc1053c4fa96e24 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.052 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CO704_RS04370 9e3e0b58d3209b4dddc1053c4fa96e24 292 SUPERFAMILY SSF111331 8 289 1.83E-92 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CO704_RS04370 9e3e0b58d3209b4dddc1053c4fa96e24 292 Gene3D G3DSA:3.40.50.10330 1 141 3.3E-39 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CO704_RS04370 9e3e0b58d3209b4dddc1053c4fa96e24 292 Pfam PF01513 ATP-NAD kinase 8 271 6.8E-79 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 207 224 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 417 440 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 32 50 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 283 303 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 484 503 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 PRINTS PR01607 Apyrase family signature 238 261 9.7E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 507 1.2E-32 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 Gene3D G3DSA:3.60.21.10 26 362 4.8E-81 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 Gene3D G3DSA:3.90.780.10 363 549 4.4E-47 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 1.8E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 SUPERFAMILY SSF56300 27 360 5.36E-95 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 SUPERFAMILY SSF55816 363 543 2.35E-52 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS05455 07bab732fb9da5eb8a58ec28098f9e80 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Gene3D G3DSA:3.30.70.1170 173 230 1.6E-16 T 28-03-2018 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Pfam PF01029 NusB family 6 127 9.3E-25 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.0E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.0E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.0E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.0E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 1.0E-30 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 428 4.8E-178 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 SUPERFAMILY SSF48013 6 149 9.97E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Gene3D G3DSA:1.10.287.730 146 172 4.2E-14 T 28-03-2018 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 67.743 T 28-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Gene3D G3DSA:1.10.940.10 1 145 1.4E-31 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Gene3D G3DSA:3.40.50.150 231 429 9.2E-55 T 28-03-2018 CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 SUPERFAMILY SSF53335 141 428 2.86E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS01255 e86c0fc80016c5d7d776cfeeb3162249 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 4.8E-75 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 272 279 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 Gene3D G3DSA:3.40.605.10 10 288 2.2E-101 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 Gene3D G3DSA:3.40.309.10 289 482 7.0E-64 T 28-03-2018 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 Pfam PF00171 Aldehyde dehydrogenase family 29 496 2.4E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11875 bd188af432339f213635ebff0953f29a 500 SUPERFAMILY SSF53720 14 499 1.7E-163 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 162 195 2.4E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 8.0E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 SUPERFAMILY SSF51161 5 201 4.3E-34 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 Gene3D G3DSA:2.160.10.10 92 210 1.0E-26 T 28-03-2018 CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 Gene3D G3DSA:3.40.50.20 3 91 2.3E-11 T 28-03-2018 CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 206 3.2E-57 T 28-03-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like CO704_RS07560 bfa46d9f227b182528f6b87605f398eb 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 169 197 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS07805 d1fe5789c92653ed38e091066d9f6de4 375 SUPERFAMILY SSF48371 31 249 2.14E-39 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 CO704_RS07805 d1fe5789c92653ed38e091066d9f6de4 375 Gene3D G3DSA:1.25.40.290 134 252 4.5E-18 T 28-03-2018 CO704_RS24020 1016adfff1bd14e260086430238f116e 232 Gene3D G3DSA:1.10.10.10 1 79 3.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24020 1016adfff1bd14e260086430238f116e 232 Pfam PF07729 FCD domain 108 225 2.0E-19 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS24020 1016adfff1bd14e260086430238f116e 232 SUPERFAMILY SSF48008 104 225 2.09E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS24020 1016adfff1bd14e260086430238f116e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.4E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24020 1016adfff1bd14e260086430238f116e 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.4E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24020 1016adfff1bd14e260086430238f116e 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 2.1E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24020 1016adfff1bd14e260086430238f116e 232 SMART SM00895 106 227 3.4E-16 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS24020 1016adfff1bd14e260086430238f116e 232 SUPERFAMILY SSF46785 10 81 8.37E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24020 1016adfff1bd14e260086430238f116e 232 SMART SM00345 18 77 5.2E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24020 1016adfff1bd14e260086430238f116e 232 Gene3D G3DSA:1.20.120.530 100 231 1.9E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS11975 d47ff19f7f9d4f8267eb021541d74397 67 Pfam PF14001 YdfZ protein 2 65 2.1E-32 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ CO704_RS11975 d47ff19f7f9d4f8267eb021541d74397 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 6.0E-33 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ CO704_RS06440 2f308376f966ef9687810c997cf86999 209 SUPERFAMILY SSF47616 78 205 3.14E-34 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS06440 2f308376f966ef9687810c997cf86999 209 Gene3D G3DSA:3.40.30.10 1 94 5.5E-26 T 28-03-2018 CO704_RS06440 2f308376f966ef9687810c997cf86999 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 197 4.1E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS06440 2f308376f966ef9687810c997cf86999 209 SUPERFAMILY SSF52833 1 84 2.87E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS06440 2f308376f966ef9687810c997cf86999 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 80 3.0E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS06440 2f308376f966ef9687810c997cf86999 209 Gene3D G3DSA:1.20.1050.10 95 209 9.5E-30 T 28-03-2018 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 PIRSF PIRSF000349 1 193 2.5E-85 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 Gene3D G3DSA:1.10.287.990 20 82 4.4E-27 T 28-03-2018 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 SUPERFAMILY SSF54719 82 191 1.31E-44 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 SUPERFAMILY SSF46609 1 83 2.75E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.1E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13540 9a15d250e90f0f4b1b570009d843a5b1 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 2.1E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 SUPERFAMILY SSF46548 655 691 1.44E-7 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 SUPERFAMILY SSF46548 517 622 1.44E-7 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Gene3D G3DSA:1.10.1060.10 546 703 2.0E-12 T 28-03-2018 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Gene3D G3DSA:3.30.465.10 105 304 4.7E-45 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 SUPERFAMILY SSF55103 258 543 3.43E-52 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 SUPERFAMILY SSF56176 32 192 9.4E-55 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 SUPERFAMILY SSF56176 250 282 9.4E-55 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Pfam PF01565 FAD binding domain 52 192 4.7E-40 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 282 539 2.6E-62 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Gene3D G3DSA:1.10.45.10 473 539 3.8E-10 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 7.4E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS13685 26555097a27adc4a315447a368b16bd8 1018 Gene3D G3DSA:3.30.43.10 4 104 5.3E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 Gene3D G3DSA:3.40.50.720 35 233 3.6E-15 T 28-03-2018 CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 SUPERFAMILY SSF51735 1 216 1.59E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 Gene3D G3DSA:3.40.50.720 1 34 2.5E-6 T 28-03-2018 CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 Gene3D G3DSA:2.60.120.10 242 365 4.2E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 187 1.7E-15 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS07625 3da98d4e6aeefc39d3331208952978dc 367 SUPERFAMILY SSF51182 236 363 8.74E-20 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 Gene3D G3DSA:1.20.1560.10 1 309 4.9E-20 T 28-03-2018 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 SUPERFAMILY SSF52540 318 531 8.91E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 SMART SM00382 351 535 2.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 Pfam PF00664 ABC transporter transmembrane region 16 157 1.4E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 Pfam PF00005 ABC transporter 344 478 8.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 SUPERFAMILY SSF90123 11 313 1.24E-22 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 531 4.3E-133 T 28-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CO704_RS18610 b0ef6b221aa8fbbca0128b185ff089b4 539 Gene3D G3DSA:3.40.50.300 310 537 4.5E-39 T 28-03-2018 CO704_RS21165 deedc91b5fdb0448f2b79607e24aa174 196 SUPERFAMILY SSF53697 3 191 6.27E-51 T 28-03-2018 CO704_RS21165 deedc91b5fdb0448f2b79607e24aa174 196 Gene3D G3DSA:3.40.50.10490 1 196 1.3E-36 T 28-03-2018 CO704_RS21165 deedc91b5fdb0448f2b79607e24aa174 196 Pfam PF13580 SIS domain 9 144 1.7E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS21165 deedc91b5fdb0448f2b79607e24aa174 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.662 T 28-03-2018 IPR023070 DnaA initiator-associating protein CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 Pfam PF00583 Acetyltransferase (GNAT) family 291 378 9.3E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 SUPERFAMILY SSF55729 26 200 1.23E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 SUPERFAMILY SSF55729 249 378 6.98E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 Gene3D G3DSA:3.40.630.30 17 208 3.4E-30 T 28-03-2018 CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 Pfam PF13302 Acetyltransferase (GNAT) domain 37 176 2.9E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS10735 0ff7d6a4fe52e50fc782026576c6fc96 392 Gene3D G3DSA:3.40.630.30 243 389 2.2E-24 T 28-03-2018 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 Gene3D G3DSA:3.40.366.10 175 298 3.6E-20 T 28-03-2018 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 293 6.2E-17 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 PIRSF PIRSF000446 1 296 8.9E-56 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 Gene3D G3DSA:3.40.366.10 2 134 1.8E-20 T 28-03-2018 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 SUPERFAMILY SSF55048 120 178 4.32E-11 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 Gene3D G3DSA:3.30.70.250 135 174 3.7E-12 T 28-03-2018 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 281 3.6E-95 T 28-03-2018 IPR017554 Malonate decarboxylase, McdH subunit CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 SUPERFAMILY SSF52151 184 277 6.45E-47 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 SUPERFAMILY SSF52151 2 119 6.45E-47 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS21240 9d1bc9f5c60f5c4c42d073753ae2b7ca 302 Pfam PF00698 Acyl transferase domain 5 292 3.1E-24 T 28-03-2018 IPR014043 Acyl transferase CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 128 5.0E-37 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 1.2E-20 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 Gene3D G3DSA:1.20.1330.10 29 247 6.1E-55 T 28-03-2018 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 SUPERFAMILY SSF64518 1 274 1.44E-70 T 28-03-2018 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 PRINTS PR00207 Flagellin signature 26 43 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 PRINTS PR00207 Flagellin signature 65 84 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS17405 bb8c20a9c43c3e5518ac906a3d190439 275 PRINTS PR00207 Flagellin signature 100 123 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 SMART SM00062 27 256 2.9E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 SUPERFAMILY SSF53850 26 257 1.49E-64 T 28-03-2018 CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 Gene3D G3DSA:3.40.190.10 141 260 1.4E-18 T 28-03-2018 CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 4.7E-98 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 Gene3D G3DSA:3.40.190.10 15 140 7.6E-36 T 28-03-2018 CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.9E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06390 fa86759e6f6488d84ceee8a2e03577f8 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS10440 1ecfd974cc19480d432d6252fd5bb8a1 268 Gene3D G3DSA:3.40.50.300 2 260 5.1E-66 T 28-03-2018 CO704_RS10440 1ecfd974cc19480d432d6252fd5bb8a1 268 Pfam PF00005 ABC transporter 31 178 4.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10440 1ecfd974cc19480d432d6252fd5bb8a1 268 SUPERFAMILY SSF52540 5 251 2.51E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10440 1ecfd974cc19480d432d6252fd5bb8a1 268 SMART SM00382 39 228 7.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10440 1ecfd974cc19480d432d6252fd5bb8a1 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS08975 417592f67e75fa5ad514ed71d6388d03 242 SUPERFAMILY SSF56317 5 221 1.96E-24 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS08975 417592f67e75fa5ad514ed71d6388d03 242 Gene3D G3DSA:3.60.110.10 2 230 5.7E-24 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS08975 417592f67e75fa5ad514ed71d6388d03 242 Pfam PF00795 Carbon-nitrogen hydrolase 6 85 1.0E-9 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Gene3D G3DSA:2.40.340.10 330 402 5.0E-22 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Gene3D G3DSA:3.90.105.10 27 64 1.1E-11 T 28-03-2018 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Pfam PF03454 MoeA C-terminal region (domain IV) 333 404 2.0E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 SMART SM00852 181 318 9.2E-44 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Gene3D G3DSA:2.170.190.11 65 142 1.2E-28 T 28-03-2018 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Pfam PF00994 Probable molybdopterin binding domain 181 317 2.8E-26 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 1.9E-45 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 SUPERFAMILY SSF53218 178 323 3.14E-44 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 SUPERFAMILY SSF63882 5 177 3.92E-57 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 Gene3D G3DSA:3.40.980.10 151 325 5.3E-54 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 SUPERFAMILY SSF63867 328 407 1.44E-25 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS07120 de3779bb5f6b83819433597e1219f72a 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 2.1E-34 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS19265 a29198a1d5e5a974865b16363554880f 166 Gene3D G3DSA:3.30.910.20 11 166 6.8E-24 T 28-03-2018 CO704_RS19265 a29198a1d5e5a974865b16363554880f 166 Pfam PF03938 Outer membrane protein (OmpH-like) 12 164 1.9E-32 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CO704_RS19265 a29198a1d5e5a974865b16363554880f 166 PIRSF PIRSF002094 1 166 6.0E-59 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CO704_RS19265 a29198a1d5e5a974865b16363554880f 166 SUPERFAMILY SSF111384 22 165 4.58E-36 T 28-03-2018 IPR024930 Skp domain CO704_RS19265 a29198a1d5e5a974865b16363554880f 166 SMART SM00935 12 166 3.3E-51 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CO704_RS03995 545431b0d29bcb1ae07460e4ec99ebbb 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 6.4E-60 T 28-03-2018 IPR018994 Protein of unknown function DUF2002 CO704_RS03995 545431b0d29bcb1ae07460e4ec99ebbb 114 SUPERFAMILY SSF159894 1 111 6.54E-59 T 28-03-2018 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 SUPERFAMILY SSF46785 16 108 4.01E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 SMART SM00866 106 246 5.6E-30 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 251 3.2E-97 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 SMART SM00345 26 85 1.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 Gene3D G3DSA:3.40.1410.10 88 253 3.9E-35 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 2.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 2.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 SUPERFAMILY SSF64288 73 248 7.07E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 Gene3D G3DSA:1.10.10.10 9 87 6.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 Pfam PF07702 UTRA domain 106 246 2.7E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS09445 b0923ffdf9db525ec5dc5770779f8a55 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 1.8E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 Gene3D G3DSA:3.40.50.1360 74 238 1.6E-22 T 28-03-2018 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 SUPERFAMILY SSF100950 75 235 8.48E-23 T 28-03-2018 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.4E-37 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 SMART SM00420 6 58 1.6E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 SUPERFAMILY SSF46785 5 60 2.63E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 SMART SM01134 74 232 1.6E-36 T 28-03-2018 CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 Gene3D G3DSA:1.10.10.10 1 61 8.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20905 331b68e614b41256ee1bc78d645108b1 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.0E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 Gene3D G3DSA:1.10.10.60 39 255 1.4E-14 T 28-03-2018 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 Gene3D G3DSA:1.10.10.60 256 309 2.5E-11 T 28-03-2018 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 253 295 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 Pfam PF12833 Helix-turn-helix domain 222 296 1.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 SMART SM00342 216 299 1.9E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 SUPERFAMILY SSF46689 252 298 2.6E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS11990 a217e95797950310d8944e3951ffba96 309 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 187 1.1E-41 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CO704_RS11990 a217e95797950310d8944e3951ffba96 309 SUPERFAMILY SSF46689 202 250 7.17E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 SUPERFAMILY SSF46785 23 166 3.04E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 SMART SM00347 46 148 4.3E-31 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 Gene3D G3DSA:1.10.10.10 19 169 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.3E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.3E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.3E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS03930 a067357c05f5ea6e07cf97b4ab2ad8d6 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 3.3E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 Pfam PF00593 TonB dependent receptor 259 734 6.9E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 Gene3D G3DSA:2.40.170.20 198 735 2.1E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 Gene3D G3DSA:2.170.130.10 36 197 1.8E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 718 735 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 735 3.4E-158 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 SUPERFAMILY SSF56935 43 735 1.44E-140 T 28-03-2018 CO704_RS19390 65b9c486fa0e1b85e6ff51284a5d78b1 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 185 2.2E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11440 83d3e71272aeb58946aff840b9945c0b 152 Gene3D G3DSA:3.40.630.30 83 138 5.3E-12 T 28-03-2018 CO704_RS11440 83d3e71272aeb58946aff840b9945c0b 152 Gene3D G3DSA:3.40.630.30 1 82 1.3E-11 T 28-03-2018 CO704_RS11440 83d3e71272aeb58946aff840b9945c0b 152 SUPERFAMILY SSF55729 4 136 1.41E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS11440 83d3e71272aeb58946aff840b9945c0b 152 Pfam PF13673 Acetyltransferase (GNAT) domain 33 135 1.6E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS02810 eec2639cfc10dbed5089b982ed6dddf3 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.678 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CO704_RS02810 eec2639cfc10dbed5089b982ed6dddf3 187 SUPERFAMILY SSF143456 1 187 3.79E-66 T 28-03-2018 CO704_RS02810 eec2639cfc10dbed5089b982ed6dddf3 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 9.3E-50 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CO704_RS02810 eec2639cfc10dbed5089b982ed6dddf3 187 Gene3D G3DSA:3.40.1740.10 103 179 3.1E-13 T 28-03-2018 CO704_RS02810 eec2639cfc10dbed5089b982ed6dddf3 187 Gene3D G3DSA:3.40.1740.10 1 95 1.3E-27 T 28-03-2018 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 9 699 1.3E-251 T 28-03-2018 IPR017750 ATPase, type I secretion system CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 Gene3D G3DSA:3.90.70.10 4 128 8.6E-12 T 28-03-2018 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 SUPERFAMILY SSF90123 145 457 1.09E-56 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 Gene3D G3DSA:1.20.1560.10 145 460 7.0E-43 T 28-03-2018 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 SUPERFAMILY SSF52540 465 703 4.26E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 ProSitePatterns PS00211 ABC transporters family signature. 613 627 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 Pfam PF00005 ABC transporter 495 641 3.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 SMART SM00382 501 687 4.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 Gene3D G3DSA:3.40.50.300 461 715 7.6E-54 T 28-03-2018 CO704_RS11860 3f4ac55582a689695c0ee0feb08ae603 726 Pfam PF00664 ABC transporter transmembrane region 162 422 2.8E-28 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 SUPERFAMILY SSF52540 4 170 2.35E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 Gene3D G3DSA:3.40.50.300 1 173 1.8E-36 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.4E-29 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.4E-29 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.4E-29 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.4E-29 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.4E-29 T 28-03-2018 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 Pfam PF01202 Shikimate kinase 13 170 1.4E-56 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS00835 e7dd4eb625c1f8078d3cb45778418718 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.201 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF56784 491 736 1.9E-34 T 28-03-2018 IPR023214 HAD-like domain CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF56784 365 385 1.9E-34 T 28-03-2018 IPR023214 HAD-like domain CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Pfam PF00689 Cation transporting ATPase, C-terminus 720 888 2.8E-15 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Pfam PF00702 haloacid dehalogenase-like hydrolase 363 651 5.3E-18 T 28-03-2018 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Pfam PF00690 Cation transporter/ATPase, N-terminus 25 88 1.6E-12 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Gene3D G3DSA:3.40.1110.10 330 544 1.8E-38 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SMART SM00831 20 93 4.1E-16 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF81665 268 361 5.62E-99 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF81665 686 894 5.62E-99 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF81665 22 142 5.62E-99 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Gene3D G3DSA:1.20.1110.10 560 892 1.6E-53 T 28-03-2018 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 SUPERFAMILY SSF81653 155 267 4.58E-25 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Gene3D G3DSA:2.70.150.10 30 269 1.3E-39 T 28-03-2018 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 695 710 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 401 414 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 745 758 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 765 781 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 850 871 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 713 724 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 280 296 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 297 316 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 PRINTS PR01836 Magnesium-transporting ATPase signature 800 821 2.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 Pfam PF00122 E1-E2 ATPase 141 347 2.1E-43 T 28-03-2018 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 15 896 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 369 375 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 726 4.4E-28 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS08275 7e19923fd3f2075fadd23e145181938b 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 262 406 1.5E-22 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 SUPERFAMILY SSF51905 144 310 4.75E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Gene3D G3DSA:3.50.50.60 253 325 1.9E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 3.5E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 SUPERFAMILY SSF56014 633 809 7.46E-48 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 3.1E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Gene3D G3DSA:3.90.480.10 445 629 1.6E-6 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Gene3D G3DSA:3.50.50.60 1 119 2.6E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Gene3D G3DSA:3.30.413.10 631 816 9.4E-36 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 SUPERFAMILY SSF51905 2 189 6.57E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PIRSF PIRSF037149 1 835 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Gene3D G3DSA:3.50.50.60 120 252 4.0E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 7.8E-14 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.8E-14 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.8E-14 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 7.8E-14 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.6E-11 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.6E-11 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.6E-11 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 4.6E-11 T 28-03-2018 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 6.0E-15 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 6.7E-15 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CO704_RS00925 dba2544e41724f0edd262cd8ffcaee59 849 SUPERFAMILY SSF55124 502 627 3.11E-30 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 Pfam PF12833 Helix-turn-helix domain 192 269 5.4E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 SUPERFAMILY SSF46689 222 271 1.75E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 SUPERFAMILY SSF51215 32 148 1.44E-17 T 28-03-2018 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 Pfam PF02311 AraC-like ligand binding domain 24 151 1.6E-25 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 Gene3D G3DSA:1.10.10.60 168 224 1.1E-14 T 28-03-2018 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 Gene3D G3DSA:1.10.10.60 225 273 1.6E-10 T 28-03-2018 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 Gene3D G3DSA:2.60.120.10 5 145 1.0E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 SUPERFAMILY SSF46689 170 219 3.45E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20810 3edae245ea23d3ca2b1a7a618977f705 273 SMART SM00342 186 268 4.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Pfam PF14814 Bifunctional transglycosylase second domain 117 201 8.7E-29 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Gene3D G3DSA:1.10.3810.10 202 401 4.3E-62 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Gene3D G3DSA:3.40.710.10 408 841 1.2E-97 T 28-03-2018 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 SUPERFAMILY SSF53955 195 407 4.22E-66 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 83 2.9E-26 T 28-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Pfam PF00912 Transglycosylase 213 384 8.4E-55 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Gene3D G3DSA:1.20.5.100 61 99 2.1E-16 T 28-03-2018 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Gene3D G3DSA:3.30.2060.10 116 201 2.7E-28 T 28-03-2018 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 72 798 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 SUPERFAMILY SSF56601 366 388 6.16E-106 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 SUPERFAMILY SSF56601 416 792 6.16E-106 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 Pfam PF00905 Penicillin binding protein transpeptidase domain 477 715 3.0E-24 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS19395 c5a03a8ed5f8c30d0ea1a214c60b215a 853 PIRSF PIRSF002799 43 851 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 Pfam PF13545 Crp-like helix-turn-helix domain 182 255 6.8E-16 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 223 2.7E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 223 238 2.7E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 Pfam PF00027 Cyclic nucleotide-binding domain 65 146 5.6E-16 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 SMART SM00100 44 165 3.9E-22 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 SMART SM00419 201 249 5.3E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 ProSitePatterns PS00042 Crp-type HTH domain signature. 209 232 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 SUPERFAMILY SSF46785 179 258 2.85E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 SUPERFAMILY SSF51206 37 176 1.57E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 Gene3D G3DSA:1.10.10.10 180 264 1.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13180 210a1f3babf42352c1460b020013bb36 264 Gene3D G3DSA:2.60.120.10 38 179 3.4E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PIRSF PIRSF004862 3 563 1.4E-176 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 Gene3D G3DSA:3.30.70.1530 54 117 2.0E-9 T 28-03-2018 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 11 561 2.2E-196 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PRINTS PR01009 Flagellar M-ring protein signature 267 285 1.0E-44 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PRINTS PR01009 Flagellar M-ring protein signature 368 392 1.0E-44 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PRINTS PR01009 Flagellar M-ring protein signature 123 141 1.0E-44 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.0E-44 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 PRINTS PR01009 Flagellar M-ring protein signature 155 169 1.0E-44 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 Pfam PF01514 Secretory protein of YscJ/FliF family 34 222 1.2E-76 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF CO704_RS08440 610140edf69891ffb69f1034ed4d7b00 563 Pfam PF08345 Flagellar M-ring protein C-terminal 254 440 2.4E-51 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 Gene3D G3DSA:1.10.287.480 181 225 6.3E-20 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 Pfam PF01430 Hsp33 protein 5 273 1.2E-87 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 PIRSF PIRSF005261 1 285 2.3E-76 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 SUPERFAMILY SSF64397 4 232 2.62E-77 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 SUPERFAMILY SSF118352 225 283 9.03E-20 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.223 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 Gene3D G3DSA:3.55.30.10 1 176 1.1E-63 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CO704_RS00775 abf197b5fde0d4cf82e83e7ae10d8bef 292 Gene3D G3DSA:3.90.1280.10 226 281 3.7E-24 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 1.2E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.2E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 3.0E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.7E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 1.6E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 5.1E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Gene3D G3DSA:3.90.199.10 34 284 5.0E-116 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 SUPERFAMILY SSF101904 533 850 1.83E-111 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Gene3D G3DSA:3.90.199.10 285 375 1.3E-9 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Gene3D G3DSA:2.120.10.90 533 854 7.8E-134 T 28-03-2018 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 SUPERFAMILY SSF56719 30 521 7.72E-185 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.6E-155 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.68 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 28-03-2018 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 Gene3D G3DSA:1.10.268.10 376 497 1.7E-51 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS06720 9a472a74d9974659a58cfb82d3366ece 878 SMART SM00434 11 499 1.3E-302 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.9E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.9E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 2.9E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 Gene3D G3DSA:3.40.50.1820 1 251 3.0E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 SUPERFAMILY SSF53474 8 248 4.42E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10620 53d6e0453f68df2579dc054c7174744c 252 Pfam PF12697 Alpha/beta hydrolase family 25 244 1.2E-16 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS00180 4d7f4ae34f3c620b7cdc12ad79baef39 83 Gene3D G3DSA:3.40.1620.10 9 64 1.6E-5 T 28-03-2018 CO704_RS00180 4d7f4ae34f3c620b7cdc12ad79baef39 83 SUPERFAMILY SSF143120 11 67 6.37E-5 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 Gene3D G3DSA:3.30.450.80 15 165 1.3E-20 T 28-03-2018 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 ProSitePatterns PS00622 LuxR-type HTH domain signature. 184 211 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 184 3.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 200 3.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 212 3.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 SMART SM00421 167 224 1.9E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 Gene3D G3DSA:1.10.10.10 169 230 2.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 Pfam PF03472 Autoinducer binding domain 18 149 2.9E-17 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 SUPERFAMILY SSF46894 161 230 2.18E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 SUPERFAMILY SSF75516 17 159 1.7E-25 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CO704_RS07925 f6a1aee1d0844197a39bb4348c88d349 232 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 223 3.1E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02655 de875296f8ca15a4ca3ef0d823d273f5 175 Pfam PF13673 Acetyltransferase (GNAT) domain 34 160 2.0E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS02655 de875296f8ca15a4ca3ef0d823d273f5 175 SUPERFAMILY SSF55729 2 159 3.96E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS02655 de875296f8ca15a4ca3ef0d823d273f5 175 Gene3D G3DSA:3.40.630.30 4 170 6.4E-21 T 28-03-2018 CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 Gene3D G3DSA:3.30.70.890 165 283 3.4E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 Pfam PF00288 GHMP kinases N terminal domain 92 148 1.6E-10 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 SUPERFAMILY SSF54211 2 162 3.95E-48 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 31.534 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 282 2.1E-107 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 Gene3D G3DSA:3.30.230.10 3 164 6.0E-45 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 PIRSF PIRSF010376 1 283 7.7E-82 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 Pfam PF08544 GHMP kinases C terminal 219 263 3.1E-5 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS09655 7bd432d55108573bd93cdc252330deda 289 SUPERFAMILY SSF55060 165 281 4.17E-35 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS05255 4460f728e0812ce133d6695d3d19f63b 252 Gene3D G3DSA:1.10.3720.10 5 252 1.6E-32 T 28-03-2018 CO704_RS05255 4460f728e0812ce133d6695d3d19f63b 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 248 4.6E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05255 4460f728e0812ce133d6695d3d19f63b 252 SUPERFAMILY SSF161098 8 242 5.49E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 Gene3D G3DSA:3.40.50.2300 177 307 8.2E-48 T 28-03-2018 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 Gene3D G3DSA:1.10.260.40 2 54 3.3E-22 T 28-03-2018 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 Gene3D G3DSA:3.40.50.2300 55 176 1.8E-31 T 28-03-2018 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 Pfam PF13377 Periplasmic binding protein-like domain 169 330 2.8E-42 T 28-03-2018 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 SMART SM00354 1 71 4.6E-38 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 SUPERFAMILY SSF53822 61 330 1.99E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS24030 406bbb8a6f0de10df96a612ac8908abb 330 SUPERFAMILY SSF47413 1 59 3.22E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 Gene3D G3DSA:1.20.1600.10 180 318 9.6E-18 T 28-03-2018 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 34 320 1.1E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 Gene3D G3DSA:2.40.50.100 44 106 2.3E-14 T 28-03-2018 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 SUPERFAMILY SSF111369 42 100 6.93E-9 T 28-03-2018 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 SUPERFAMILY SSF111369 179 326 3.79E-12 T 28-03-2018 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 Gene3D G3DSA:1.10.287.470 112 171 3.0E-10 T 28-03-2018 CO704_RS16385 89226b946fcc9c2c4b4134aae6491528 335 SUPERFAMILY SSF111369 114 172 7.32E-5 T 28-03-2018 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 SUPERFAMILY SSF52540 258 497 5.79E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 Gene3D G3DSA:3.40.50.300 253 506 5.8E-70 T 28-03-2018 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 Gene3D G3DSA:1.10.3720.10 1 226 9.0E-42 T 28-03-2018 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 SUPERFAMILY SSF161098 16 206 4.71E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 221 6.8E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 SMART SM00382 282 478 3.5E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 115 2.8E-20 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS08255 38f76074fd8bdb1eef12a14d368477aa 510 Pfam PF00005 ABC transporter 275 430 9.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06485 d495ad37197f44737a88d450b6d96500 277 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 266 3.6E-50 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS06485 d495ad37197f44737a88d450b6d96500 277 SUPERFAMILY SSF52518 3 268 9.11E-78 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS06485 d495ad37197f44737a88d450b6d96500 277 Gene3D G3DSA:3.40.50.970 3 275 6.3E-67 T 28-03-2018 CO704_RS17340 0ece025bda7e183dbbde55cbd091e444 267 Pfam PF00445 Ribonuclease T2 family 37 234 4.4E-12 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CO704_RS17340 0ece025bda7e183dbbde55cbd091e444 267 SUPERFAMILY SSF55895 32 238 1.7E-26 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CO704_RS17340 0ece025bda7e183dbbde55cbd091e444 267 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 147 158 - T 28-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CO704_RS17340 0ece025bda7e183dbbde55cbd091e444 267 Gene3D G3DSA:3.90.730.10 29 266 3.4E-33 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CO704_RS17340 0ece025bda7e183dbbde55cbd091e444 267 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 74 81 - T 28-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CO704_RS03035 2aebf11aa13667faf8643db063fab03e 253 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 242 1.1E-29 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS03035 2aebf11aa13667faf8643db063fab03e 253 Gene3D G3DSA:3.90.420.10 41 253 2.4E-53 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS03035 2aebf11aa13667faf8643db063fab03e 253 SUPERFAMILY SSF56524 53 252 1.31E-58 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS16335 1a3d12b59399fc7ab72ec406248c3b24 318 SMART SM00849 84 289 1.5E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS16335 1a3d12b59399fc7ab72ec406248c3b24 318 Gene3D G3DSA:3.60.15.10 23 318 2.3E-56 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS16335 1a3d12b59399fc7ab72ec406248c3b24 318 SUPERFAMILY SSF56281 28 311 1.27E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS16335 1a3d12b59399fc7ab72ec406248c3b24 318 Pfam PF00753 Metallo-beta-lactamase superfamily 83 289 5.8E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS20645 c8b05505b85b4574f7acd554085c7686 322 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 312 1.1E-120 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CO704_RS20645 c8b05505b85b4574f7acd554085c7686 322 Pfam PF03741 Integral membrane protein TerC family 80 282 7.7E-56 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CO704_RS11995 d49c2bda8fdf0ec42547caadcf79ecc4 472 Pfam PF00171 Aldehyde dehydrogenase family 20 469 5.4E-142 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11995 d49c2bda8fdf0ec42547caadcf79ecc4 472 SUPERFAMILY SSF53720 6 470 2.75E-136 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS11995 d49c2bda8fdf0ec42547caadcf79ecc4 472 Gene3D G3DSA:3.40.309.10 260 455 6.6E-62 T 28-03-2018 CO704_RS11995 d49c2bda8fdf0ec42547caadcf79ecc4 472 Gene3D G3DSA:3.40.605.10 2 259 1.6E-71 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11995 d49c2bda8fdf0ec42547caadcf79ecc4 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 Pfam PF04994 TfoX C-terminal domain 119 195 1.2E-23 T 28-03-2018 IPR007077 TfoX, C-terminal CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 PIRSF PIRSF028788 1 208 2.5E-60 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 Gene3D G3DSA:1.10.150.20 119 196 1.3E-15 T 28-03-2018 CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 SUPERFAMILY SSF159894 12 107 3.14E-28 T 28-03-2018 CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 Pfam PF04993 TfoX N-terminal domain 14 105 8.2E-27 T 28-03-2018 IPR007076 TfoX, N-terminal CO704_RS15365 c10f99938a9992a9a49a2130eb7ff478 209 Gene3D G3DSA:3.30.1460.30 8 108 5.5E-22 T 28-03-2018 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 477 8.6E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 Pfam PF08447 PAS fold 31 114 5.4E-14 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 SUPERFAMILY SSF55785 21 115 6.81E-25 T 28-03-2018 IPR000014 PAS domain CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 SMART SM00086 80 120 1.6E-5 T 28-03-2018 IPR001610 PAC motif CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 SMART SM00283 263 510 7.8E-56 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 SUPERFAMILY SSF58104 235 509 1.44E-57 T 28-03-2018 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 123 4.2E-14 T 28-03-2018 IPR000014 PAS domain CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 4.8E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 4.8E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 4.8E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 4.8E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 Gene3D G3DSA:3.40.50.10600 5 130 2.4E-27 T 28-03-2018 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 Gene3D G3DSA:1.10.287.950 208 314 5.6E-9 T 28-03-2018 CO704_RS18575 2f6a15049f38cef0995010eb1003d439 511 Gene3D G3DSA:1.10.287.950 315 509 1.3E-38 T 28-03-2018 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 Gene3D G3DSA:3.40.190.10 88 177 6.5E-16 T 28-03-2018 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 Gene3D G3DSA:1.10.10.10 1 83 1.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 Pfam PF03466 LysR substrate binding domain 88 289 4.0E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 SUPERFAMILY SSF53850 88 291 6.05E-29 T 28-03-2018 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 SUPERFAMILY SSF46785 1 83 2.13E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 Gene3D G3DSA:3.40.190.10 178 267 2.2E-16 T 28-03-2018 CO704_RS18520 d4dafcf694456c50425d2de1eac84c8d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.3E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS09750 ee94ae6e613ec58c95a8291a04381e63 234 Gene3D G3DSA:1.10.3480.10 4 183 1.6E-28 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS09750 ee94ae6e613ec58c95a8291a04381e63 234 Pfam PF02613 Nitrate reductase delta subunit 39 149 1.7E-10 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS09750 ee94ae6e613ec58c95a8291a04381e63 234 SUPERFAMILY SSF89155 4 164 1.7E-31 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS09750 ee94ae6e613ec58c95a8291a04381e63 234 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 3.8E-45 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CO704_RS00820 1aa41ef4c71a446fad854b45ec3ee72a 130 Pfam PF10748 Protein of unknown function (DUF2531) 4 115 2.4E-8 T 28-03-2018 IPR019684 HofP protein CO704_RS07640 5de5b434c11481ad91dd53deb96780b4 137 Gene3D G3DSA:2.60.120.10 10 135 3.8E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS07640 5de5b434c11481ad91dd53deb96780b4 137 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 3 134 9.8E-38 T 28-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family CO704_RS07640 5de5b434c11481ad91dd53deb96780b4 137 SUPERFAMILY SSF51182 34 125 6.24E-12 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS25845 32152772ced79ed99782f2acbca7bc41 162 SUPERFAMILY SSF47413 2 69 9.7E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25845 32152772ced79ed99782f2acbca7bc41 162 SMART SM00530 9 65 0.0026 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25845 32152772ced79ed99782f2acbca7bc41 162 Gene3D G3DSA:1.10.260.40 1 126 1.2E-10 T 28-03-2018 CO704_RS25845 32152772ced79ed99782f2acbca7bc41 162 Pfam PF01381 Helix-turn-helix 16 65 4.0E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 Gene3D G3DSA:3.90.1310.10 33 249 5.4E-55 T 28-03-2018 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 6.7E-238 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 SUPERFAMILY SSF56601 254 610 2.73E-90 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 5.1E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 2.4E-88 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 Gene3D G3DSA:3.40.710.10 250 618 4.0E-82 T 28-03-2018 CO704_RS17240 174c74f35d6be38c4fba1a9747706d14 633 SUPERFAMILY SSF56519 56 253 1.06E-53 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 Gene3D G3DSA:3.60.120.10 2 455 2.7E-154 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.5E-17 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 PRINTS PR00095 Anthranilate synthase component I signature 387 401 1.5E-17 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.5E-17 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.5E-17 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 155 3.6E-29 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 108 449 2.7E-128 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 Pfam PF00425 chorismate binding enzyme 191 445 1.0E-91 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CO704_RS09170 a7473abeb96be9e83dbb44d959e418d4 455 SUPERFAMILY SSF56322 10 454 1.44E-142 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 Gene3D G3DSA:1.10.150.240 12 79 4.0E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 184 1.0E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 Gene3D G3DSA:3.40.50.1000 80 197 8.1E-19 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 72 184 6.4E-11 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23920 e664172ee8dd53aa48cee1c52718bafb 198 SUPERFAMILY SSF56784 3 193 3.31E-40 T 28-03-2018 IPR023214 HAD-like domain CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 SMART SM00062 22 243 1.2E-86 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 SMART SM00079 22 243 5.5E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 Gene3D G3DSA:3.40.190.10 9 144 2.5E-37 T 28-03-2018 CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 SUPERFAMILY SSF53850 1 242 6.78E-72 T 28-03-2018 CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 Gene3D G3DSA:3.40.190.10 145 241 1.9E-17 T 28-03-2018 CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 242 4.5E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15825 ec2d5c0cc0493a3ed9f662de8a77327f 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 7.2E-89 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.314 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 SUPERFAMILY SSF53383 10 398 1.33E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 Gene3D G3DSA:3.90.1150.10 290 405 2.9E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 3.7E-160 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 Pfam PF00202 Aminotransferase class-III 20 396 1.2E-124 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 PIRSF PIRSF000521 159 400 3.4E-40 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 PIRSF PIRSF000521 26 155 5.7E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 Gene3D G3DSA:3.40.640.10 171 289 2.5E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 6.8E-223 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CO704_RS13940 3fa45c52fb0afb5357b715e8249bdd23 406 Gene3D G3DSA:3.90.1150.10 2 170 2.3E-47 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 4.5E-21 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 SUPERFAMILY SSF55594 4 90 6.93E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 Gene3D G3DSA:3.30.1340.10 2 89 1.9E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 3.0E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.2E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.2E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS01610 30023d77de5a183e49d3fbf39228564b 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.2E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.7E-75 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Gene3D G3DSA:3.40.50.300 1 271 4.5E-54 T 28-03-2018 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Gene3D G3DSA:3.40.50.300 274 376 3.7E-22 T 28-03-2018 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.81 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 SUPERFAMILY SSF52540 2 637 1.58E-163 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Gene3D G3DSA:1.10.486.10 377 553 4.7E-39 T 28-03-2018 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.5E-71 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CO704_RS23375 3285f91b43a252431cbfbfffcae7b28d 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 Pfam PF07690 Major Facilitator Superfamily 31 378 7.3E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 322 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 SUPERFAMILY SSF103473 21 436 6.28E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 422 1.3E-144 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 Gene3D G3DSA:1.20.1250.20 229 437 2.9E-22 T 28-03-2018 CO704_RS24625 5b25a47044f3cd590dc1da14dae6834e 437 Gene3D G3DSA:1.20.1250.20 20 228 8.9E-22 T 28-03-2018 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 SUPERFAMILY SSF56770 43 189 2.09E-64 T 28-03-2018 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.6E-22 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 182 1.2E-69 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.212 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06550 9c96452831ddb684eb3094370fb16042 224 Gene3D G3DSA:3.40.50.700 36 209 8.2E-39 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 Gene3D G3DSA:1.20.1440.90 274 378 8.3E-25 T 28-03-2018 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.339 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 7.1E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 SUPERFAMILY SSF51621 6 883 0.0 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 Gene3D G3DSA:3.20.20.60 379 594 1.1E-5 T 28-03-2018 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 6.5E-293 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS23540 fc975f1869c0746f43c7f491bbd06028 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 SUPERFAMILY SSF52016 419 600 3.3E-57 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 SUPERFAMILY SSF143975 1 418 3.14E-145 T 28-03-2018 CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 Pfam PF00920 Dehydratase family 66 598 4.1E-158 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS08940 67c7ccb23fc8788660c0ee8eb362586e 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CO704_RS01725 ee4663e1b5f2dfad96f6811d8f6e7ba8 321 Pfam PF00892 EamA-like transporter family 7 142 5.4E-27 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS01725 ee4663e1b5f2dfad96f6811d8f6e7ba8 321 Pfam PF00892 EamA-like transporter family 159 290 5.7E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS01725 ee4663e1b5f2dfad96f6811d8f6e7ba8 321 SUPERFAMILY SSF103481 41 143 1.22E-13 T 28-03-2018 CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 9.0E-117 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 3.3E-26 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 3.2E-30 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.2E-48 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 SUPERFAMILY SSF117143 93 222 1.44E-34 T 28-03-2018 CO704_RS14640 213e9ffa611f1f660ed58896b15046bc 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 Gene3D G3DSA:3.90.76.10 63 175 2.1E-34 T 28-03-2018 CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 Gene3D G3DSA:3.10.105.10 312 512 1.5E-56 T 28-03-2018 CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 PIRSF PIRSF002741 1 541 3.5E-113 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 463 1.5E-90 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 SUPERFAMILY SSF53850 35 525 1.99E-148 T 28-03-2018 CO704_RS09860 acef42b3bf03ba8ac377574f8afc7572 543 Gene3D G3DSA:3.40.190.10 176 311 1.6E-37 T 28-03-2018 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 Gene3D G3DSA:2.40.50.140 46 113 1.7E-18 T 28-03-2018 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 Pfam PF03193 RsgA GTPase 111 288 1.3E-53 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 Gene3D G3DSA:1.10.40.50 289 357 1.4E-22 T 28-03-2018 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 Gene3D G3DSA:3.40.50.300 125 287 8.8E-23 T 28-03-2018 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 SUPERFAMILY SSF52540 125 352 4.67E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 84 346 2.9E-94 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CO704_RS21025 7e2706b0d9453045a48e672f7c41a098 362 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 51 352 37.138 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CO704_RS10270 006b17dadb2b323053a0783e1c93a700 293 SUPERFAMILY SSF89550 10 90 1.57E-52 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CO704_RS10270 006b17dadb2b323053a0783e1c93a700 293 SUPERFAMILY SSF89550 172 287 1.57E-52 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CO704_RS10270 006b17dadb2b323053a0783e1c93a700 293 Gene3D G3DSA:3.20.20.140 10 262 1.5E-42 T 28-03-2018 CO704_RS10270 006b17dadb2b323053a0783e1c93a700 293 SMART SM00481 10 77 2.1E-18 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CO704_RS10270 006b17dadb2b323053a0783e1c93a700 293 Pfam PF02811 PHP domain 11 115 7.4E-9 T 28-03-2018 IPR004013 PHP domain GO:0003824 CO704_RS19165 566009aa7691708c13459b6ef8a3562c 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 35.292 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CO704_RS19165 566009aa7691708c13459b6ef8a3562c 134 Pfam PF16358 RcsF lipoprotein 30 132 5.9E-50 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 Gene3D G3DSA:2.40.33.20 1 269 1.8E-52 T 28-03-2018 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 324 332 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 Pfam PF03473 MOSC domain 139 263 1.9E-29 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 SUPERFAMILY SSF141673 4 132 2.09E-30 T 28-03-2018 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 SUPERFAMILY SSF50800 147 266 4.71E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 SUPERFAMILY SSF50800 4 50 4.71E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 295 362 2.9E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 Gene3D G3DSA:3.10.20.30 270 370 1.6E-15 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 6.8E-31 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel CO704_RS15440 cf9d889425e0b37131d427143e4d0f91 371 SUPERFAMILY SSF54292 290 368 3.15E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PIRSF PIRSF000350 1 469 2.2E-88 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.6E-70 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 Gene3D G3DSA:3.30.390.30 339 462 9.2E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 Gene3D G3DSA:3.40.50.720 168 338 9.1E-30 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 8.0E-63 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.1E-42 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.1E-42 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.1E-42 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.1E-42 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.1E-42 T 28-03-2018 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 Gene3D G3DSA:3.50.50.60 1 167 8.9E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 SUPERFAMILY SSF55424 343 466 4.47E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 8.4E-151 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.2E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CO704_RS19515 fca929e55328e69c542c22da5f3dcf98 474 SUPERFAMILY SSF51905 2 337 1.17E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 SUPERFAMILY SSF53850 29 534 1.27E-163 T 28-03-2018 CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 Gene3D G3DSA:3.10.105.10 300 506 2.1E-66 T 28-03-2018 CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 Gene3D G3DSA:3.40.190.10 204 299 3.5E-29 T 28-03-2018 CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.6E-109 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 Gene3D G3DSA:3.90.76.10 38 203 4.5E-38 T 28-03-2018 CO704_RS24510 7ba97294387468dc15e5b996ff51d2e7 535 PIRSF PIRSF002741 21 535 1.4E-122 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS19330 527a599b517a5f90173794cf41bbc8b2 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 8.0E-66 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CO704_RS19330 527a599b517a5f90173794cf41bbc8b2 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 3.5E-55 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CO704_RS19330 527a599b517a5f90173794cf41bbc8b2 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.638 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 SUPERFAMILY SSF46785 11 63 1.06E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 SUPERFAMILY SSF53067 83 354 1.73E-38 T 28-03-2018 CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 Gene3D G3DSA:3.30.420.40 65 202 9.0E-16 T 28-03-2018 CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 Gene3D G3DSA:1.10.10.10 1 64 1.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 Pfam PF00480 ROK family 120 351 3.8E-35 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS04855 c6e3f888bfba8e43d0d579f173036537 397 Gene3D G3DSA:3.30.420.40 203 397 1.1E-37 T 28-03-2018 CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 Gene3D G3DSA:1.10.10.730 134 180 7.2E-9 T 28-03-2018 CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 SUPERFAMILY SSF109709 127 219 2.35E-18 T 28-03-2018 CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 SMART SM00470 37 133 3.3E-22 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 Pfam PF02195 ParB-like nuclease domain 38 132 2.9E-16 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 SUPERFAMILY SSF110849 36 135 9.07E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS21655 6cd8c651513672ce4adb16cd17f94173 589 Gene3D G3DSA:3.90.1530.10 25 133 1.2E-17 T 28-03-2018 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Pfam PF01434 Peptidase family M41 382 591 1.4E-82 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Pfam PF06480 FtsH Extracellular 5 93 8.3E-17 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Gene3D G3DSA:3.40.50.300 128 331 4.4E-63 T 28-03-2018 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Gene3D G3DSA:1.10.8.60 332 411 2.1E-25 T 28-03-2018 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 6.2E-248 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 SUPERFAMILY SSF140990 402 602 5.23E-73 T 28-03-2018 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.47 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 SUPERFAMILY SSF52540 141 391 6.57E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01765 d24824f7881f1eb7f960e48c223cb869 645 SMART SM00382 184 323 1.9E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 32 275 4.2E-96 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 3.4E-99 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 SUPERFAMILY SSF81301 19 286 2.09E-89 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 1.5E-44 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Pfam PF08335 GlnD PII-uridylyltransferase 825 918 1.2E-11 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 SUPERFAMILY SSF81593 287 436 7.61E-44 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 SUPERFAMILY SSF81593 818 943 4.55E-33 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:3.30.460.10 638 811 7.6E-60 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:3.30.460.10 111 284 1.8E-58 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:1.20.120.330 812 945 2.0E-37 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:1.10.4050.10 530 637 4.2E-22 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:1.10.4050.10 1 110 7.3E-18 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Gene3D G3DSA:1.20.120.330 285 440 1.0E-48 T 28-03-2018 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 19.819 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CO704_RS20270 7cfc4a45764b067b23221ae96577bbea 945 SUPERFAMILY SSF81301 527 815 3.04E-88 T 28-03-2018 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 Gene3D G3DSA:3.30.70.260 256 343 2.1E-26 T 28-03-2018 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 Gene3D G3DSA:3.40.50.300 1 255 3.5E-78 T 28-03-2018 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 Pfam PF09383 NIL domain 268 339 7.3E-20 T 28-03-2018 IPR018449 NIL domain CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 SUPERFAMILY SSF55021 248 343 1.83E-25 T 28-03-2018 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 SMART SM00382 30 218 3.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 SUPERFAMILY SSF52540 1 240 3.17E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 Pfam PF00005 ABC transporter 21 169 8.2E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 SMART SM00930 265 340 6.1E-27 T 28-03-2018 IPR018449 NIL domain CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.5E-202 T 28-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CO704_RS19150 826e1b5ab707d7a51657613905d933e2 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS03620 d5471b95c3e3c542c73844ef57846caf 288 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 166 247 5.1E-20 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CO704_RS03620 d5471b95c3e3c542c73844ef57846caf 288 SUPERFAMILY SSF52402 40 127 7.43E-6 T 28-03-2018 CO704_RS03620 d5471b95c3e3c542c73844ef57846caf 288 Gene3D G3DSA:3.40.50.1220 163 287 7.9E-36 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS03620 d5471b95c3e3c542c73844ef57846caf 288 SUPERFAMILY SSF52467 165 282 1.09E-30 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS03620 d5471b95c3e3c542c73844ef57846caf 288 Gene3D G3DSA:3.40.50.620 40 162 5.8E-5 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS07000 8908c2048e84f85e41a428a342e2e666 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 2.7E-48 T 28-03-2018 IPR007349 Domain of unknown function DUF418 CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Gene3D G3DSA:3.30.70.20 85 128 9.2E-14 T 28-03-2018 CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Gene3D G3DSA:3.30.70.20 7 54 7.9E-8 T 28-03-2018 CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Pfam PF13247 4Fe-4S dicluster domain 45 135 3.0E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Gene3D G3DSA:3.30.70.20 55 84 3.8E-9 T 28-03-2018 CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Pfam PF12800 4Fe-4S binding domain 11 22 0.031 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 Gene3D G3DSA:3.30.70.20 129 151 0.03 T 28-03-2018 CO704_RS10970 cd0e6e78cdb5baf0cfe8b0d2316373bd 159 SUPERFAMILY SSF54862 4 152 1.51E-39 T 28-03-2018 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 Pfam PF13181 Tetratricopeptide repeat 215 244 0.025 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SUPERFAMILY SSF48452 39 134 3.03E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 Gene3D G3DSA:1.25.40.10 123 180 2.6E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SUPERFAMILY SSF48452 102 281 4.55E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.84 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 214 247 0.033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 282 315 420.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 69 102 21.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 107 140 320.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 141 174 430.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 SMART SM00028 180 213 140.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 Gene3D G3DSA:1.25.40.10 37 122 8.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS10360 29ff5bee50a62936d7e0b10acf026514 389 Gene3D G3DSA:1.25.40.10 181 368 2.1E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24470 98f74f0057c84006e1553f3b3d1d608c 76 Gene3D G3DSA:2.10.260.10 4 43 9.2E-4 T 28-03-2018 CO704_RS24470 98f74f0057c84006e1553f3b3d1d608c 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 52 5.3E-7 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CO704_RS24470 98f74f0057c84006e1553f3b3d1d608c 76 SUPERFAMILY SSF89447 3 67 3.14E-6 T 28-03-2018 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 50.52 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 Pfam PF00266 Aminotransferase class-V 4 349 1.7E-67 T 28-03-2018 IPR000192 Aminotransferase class V domain CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 Gene3D G3DSA:3.40.640.10 16 258 7.7E-25 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 Gene3D G3DSA:3.90.1150.10 259 359 4.0E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 PIRSF PIRSF000525 1 361 1.2E-144 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 6.1E-154 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CO704_RS15600 7b72d4083cf148aa90e727e6a622ee00 361 SUPERFAMILY SSF53383 3 361 3.75E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 SUPERFAMILY SSF54913 1 112 2.13E-46 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 PIRSF PIRSF039144 1 112 4.8E-58 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 Gene3D G3DSA:3.30.70.120 1 108 2.7E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 SMART SM00938 4 105 2.2E-67 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CO704_RS04805 7f2d96ff8d3b7b1ec8d0faec2ca30594 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS20275 63f269ff18e13a43c713a78292f0a4d0 432 SUPERFAMILY SSF55154 1 219 1.14E-52 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CO704_RS20275 63f269ff18e13a43c713a78292f0a4d0 432 SMART SM01118 2 202 1.5E-40 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CO704_RS20275 63f269ff18e13a43c713a78292f0a4d0 432 Pfam PF01928 CYTH domain 3 196 1.1E-34 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CO704_RS20275 63f269ff18e13a43c713a78292f0a4d0 432 Gene3D G3DSA:2.40.320.10 1 209 3.7E-47 T 28-03-2018 CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 SUPERFAMILY SSF53639 2 197 1.08E-43 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 203 116.793 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 SMART SM01007 7 195 1.1E-45 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 Gene3D G3DSA:3.40.225.10 2 201 5.2E-46 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 193 3.9E-41 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS15090 c3367ff9ab4a2cfb4e0829e9b4b6f3a9 203 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 9 198 2.4E-65 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CO704_RS24165 b82f06b5af072f03e45c2a056ee31d63 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 292 2.9E-84 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CO704_RS24165 b82f06b5af072f03e45c2a056ee31d63 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.9E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24165 b82f06b5af072f03e45c2a056ee31d63 296 SUPERFAMILY SSF161098 33 286 1.83E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24165 b82f06b5af072f03e45c2a056ee31d63 296 Gene3D G3DSA:1.10.3720.10 15 287 2.4E-36 T 28-03-2018 CO704_RS10345 0a9992f6d334d82acb23dae4dfe96787 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.532 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CO704_RS10345 0a9992f6d334d82acb23dae4dfe96787 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 5.2E-93 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CO704_RS10345 0a9992f6d334d82acb23dae4dfe96787 196 SUPERFAMILY SSF142695 3 173 2.22E-67 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CO704_RS10345 0a9992f6d334d82acb23dae4dfe96787 196 Pfam PF00925 GTP cyclohydrolase II 5 170 4.9E-68 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 SMART SM01230 102 379 1.3E-151 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.7E-219 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 Gene3D G3DSA:3.10.20.70 2 104 7.0E-29 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 2.6E-32 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 SUPERFAMILY SSF55931 102 468 2.75E-139 T 28-03-2018 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 SUPERFAMILY SSF54368 3 100 5.62E-37 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 Gene3D G3DSA:3.30.590.10 105 457 2.0E-123 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CO704_RS23935 4471f3fc4c58cd8578962b43d49b6265 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.1E-139 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS14645 7a7b651ec7f5d9dc25cbf6477e36eee6 251 Pfam PF00460 Flagella basal body rod protein 5 35 3.0E-9 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS14645 7a7b651ec7f5d9dc25cbf6477e36eee6 251 SUPERFAMILY SSF117143 77 209 4.71E-16 T 28-03-2018 CO704_RS14645 7a7b651ec7f5d9dc25cbf6477e36eee6 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS14645 7a7b651ec7f5d9dc25cbf6477e36eee6 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.5E-30 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS14645 7a7b651ec7f5d9dc25cbf6477e36eee6 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 8.2E-21 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS05865 dfd69ff4d77e6726e149883b441aa15f 332 PIRSF PIRSF026166 1 332 8.4E-131 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CO704_RS05865 dfd69ff4d77e6726e149883b441aa15f 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 1.1E-98 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 SUPERFAMILY SSF46894 123 194 2.14E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 Gene3D G3DSA:3.40.50.2300 1 132 2.3E-6 T 28-03-2018 CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 SUPERFAMILY SSF52172 1 152 3.17E-6 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 Gene3D G3DSA:1.10.10.10 137 196 3.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 SMART SM00421 139 196 2.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21360 8badbdabae19fabb4091ef3a7d869348 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 192 5.2E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.2E-103 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 Gene3D G3DSA:3.30.1020.10 154 183 1.2E-9 T 28-03-2018 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 SUPERFAMILY SSF52833 1 186 7.3E-53 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 Pfam PF00578 AhpC/TSA family 10 133 4.5E-32 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 PIRSF PIRSF000239 1 187 2.2E-49 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS05615 081b05e4699f9c786b8e9e637d2c3e1b 187 Gene3D G3DSA:3.40.30.10 5 153 8.4E-32 T 28-03-2018 CO704_RS20370 8139f78d671a74ac9747ee95238f09b5 149 SUPERFAMILY SSF51215 71 137 9.81E-5 T 28-03-2018 CO704_RS20370 8139f78d671a74ac9747ee95238f09b5 149 Gene3D G3DSA:2.60.120.10 16 146 3.3E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SMART SM01086 780 873 1.8E-8 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SMART SM00382 609 782 1.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SMART SM00382 233 378 2.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Gene3D G3DSA:1.10.8.60 780 881 5.8E-13 T 28-03-2018 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Gene3D G3DSA:3.40.50.300 192 377 2.8E-21 T 28-03-2018 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SUPERFAMILY SSF81923 12 125 7.85E-21 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Gene3D G3DSA:1.10.1780.10 1 159 2.4E-30 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 861 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 238 350 3.3E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SUPERFAMILY SSF52540 194 534 2.64E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Gene3D G3DSA:3.40.50.300 564 779 3.9E-35 T 28-03-2018 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 7.6E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 7.6E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 7.6E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 7.6E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Gene3D G3DSA:1.10.8.60 379 559 1.0E-38 T 28-03-2018 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 855 8.2E-13 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS22120 31ceee2d2a207799312118624deb3467 881 SUPERFAMILY SSF52540 558 851 2.06E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22120 31ceee2d2a207799312118624deb3467 881 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 8.3E-39 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS22120 31ceee2d2a207799312118624deb3467 881 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CO704_RS09040 a6d64b6e47fe849028b1e4abe9bc385d 175 SUPERFAMILY SSF55781 14 164 3.71E-43 T 28-03-2018 IPR029016 GAF domain-like CO704_RS09040 a6d64b6e47fe849028b1e4abe9bc385d 175 Pfam PF13185 GAF domain 50 164 8.7E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS09040 a6d64b6e47fe849028b1e4abe9bc385d 175 SMART SM00065 22 174 8.2E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS09040 a6d64b6e47fe849028b1e4abe9bc385d 175 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 103 120 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site CO704_RS09040 a6d64b6e47fe849028b1e4abe9bc385d 175 Gene3D G3DSA:3.30.450.40 15 167 8.5E-26 T 28-03-2018 IPR029016 GAF domain-like CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 5.0E-41 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.733 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.2E-47 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.9E-30 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 SUPERFAMILY SSF51344 3 86 2.88E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 SUPERFAMILY SSF46604 88 137 2.56E-15 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.4E-13 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 Gene3D G3DSA:1.20.5.440 91 131 2.8E-13 T 28-03-2018 CO704_RS24140 41b3be40252d80bad7928c154867dc40 139 Gene3D G3DSA:2.60.15.10 1 90 1.7E-28 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS04680 aa84a3f42fc403913ba1937fac2416d4 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 6.1E-60 T 28-03-2018 IPR021695 Bacteriophage rv5, Orf52 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 SUPERFAMILY SSF52317 153 378 1.38E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 Gene3D G3DSA:3.40.50.880 152 379 2.7E-69 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 SUPERFAMILY SSF52021 3 142 1.57E-56 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 9.5E-40 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 9.5E-40 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 9.5E-40 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 9.5E-40 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 9.5E-40 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.505 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 Gene3D G3DSA:3.50.30.20 2 151 2.0E-62 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 Pfam PF00117 Glutamine amidotransferase class-I 198 372 7.8E-50 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 SMART SM01097 3 133 2.6E-90 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.1E-51 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.0E-151 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 28-03-2018 CO704_RS19840 e48acd5129d97fc6bba5779a95aec1c4 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 28-03-2018 CO704_RS08300 e8bc761940e0f04a4ebb0be2d44aec69 371 Pfam PF02378 Phosphotransferase system, EIIC 22 293 3.7E-9 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS08300 e8bc761940e0f04a4ebb0be2d44aec69 371 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 14 343 9.6E-74 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CO704_RS17215 3bb800bc011cd5ebb42d6d2a3717a5a1 205 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 167 25.877 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CO704_RS17215 3bb800bc011cd5ebb42d6d2a3717a5a1 205 Pfam PF04390 Lipopolysaccharide-assembly 35 162 6.6E-15 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CO704_RS17215 3bb800bc011cd5ebb42d6d2a3717a5a1 205 Gene3D G3DSA:3.30.160.150 20 176 1.7E-49 T 28-03-2018 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.4E-130 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 SUPERFAMILY SSF51621 171 344 1.01E-86 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 SUPERFAMILY SSF51621 4 79 1.01E-86 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 Gene3D G3DSA:3.20.20.60 6 172 9.3E-35 T 28-03-2018 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 Gene3D G3DSA:3.20.20.60 173 327 7.2E-54 T 28-03-2018 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 5.4E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.8E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 SUPERFAMILY SSF50800 74 169 4.19E-24 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 Gene3D G3DSA:3.40.1380.20 328 480 5.2E-40 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 SUPERFAMILY SSF52935 329 479 1.15E-37 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS08925 7a5f49d3260f5c90b5b85ccc65c9dd6b 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 477 2.0E-172 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CO704_RS12970 f6ede2cd2aab5b91868757007980269b 338 SUPERFAMILY SSF49401 202 338 3.28E-24 T 28-03-2018 IPR008966 Adhesion domain CO704_RS12970 f6ede2cd2aab5b91868757007980269b 338 Gene3D G3DSA:2.60.40.1090 194 338 4.7E-31 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS12970 f6ede2cd2aab5b91868757007980269b 338 Pfam PF00419 Fimbrial protein 197 338 5.4E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 Gene3D G3DSA:1.10.10.10 9 88 1.1E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 Gene3D G3DSA:3.30.450.40 96 276 1.9E-50 T 28-03-2018 IPR029016 GAF domain-like CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 SUPERFAMILY SSF55781 98 274 4.9E-50 T 28-03-2018 IPR029016 GAF domain-like CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 SMART SM00346 27 117 1.9E-35 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 Pfam PF09339 IclR helix-turn-helix domain 29 79 7.9E-18 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 Pfam PF01614 Bacterial transcriptional regulator 147 270 3.1E-40 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CO704_RS22790 eab98bb8468e17608346500bed2f59e1 277 SUPERFAMILY SSF46785 27 100 2.19E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07095 72996402db9f169d278d6266dc278b4a 433 PIRSF PIRSF002808 1 433 9.9E-34 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS07095 72996402db9f169d278d6266dc278b4a 433 Gene3D G3DSA:1.20.1250.20 226 433 1.7E-21 T 28-03-2018 CO704_RS07095 72996402db9f169d278d6266dc278b4a 433 Pfam PF07690 Major Facilitator Superfamily 30 390 1.1E-55 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07095 72996402db9f169d278d6266dc278b4a 433 Gene3D G3DSA:1.20.1250.20 13 215 6.4E-40 T 28-03-2018 CO704_RS07095 72996402db9f169d278d6266dc278b4a 433 SUPERFAMILY SSF103473 17 431 3.66E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SMART SM00533 286 591 3.0E-108 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.382 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Pfam PF05188 MutS domain II 131 256 1.0E-33 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Gene3D G3DSA:3.30.420.110 135 265 3.1E-27 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SMART SM00534 607 794 6.2E-123 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Pfam PF05192 MutS domain III 272 559 1.6E-39 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 PIRSF PIRSF037677 3 835 2.2E-159 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SUPERFAMILY SSF55271 7 116 8.37E-43 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Pfam PF01624 MutS domain I 11 122 1.4E-42 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Gene3D G3DSA:1.10.1420.10 408 535 1.3E-30 T 28-03-2018 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SUPERFAMILY SSF52540 567 798 1.05E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Pfam PF00488 MutS domain V 610 797 4.2E-88 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Gene3D G3DSA:3.40.50.300 567 821 6.2E-41 T 28-03-2018 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Pfam PF05190 MutS family domain IV 428 517 1.3E-28 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SUPERFAMILY SSF48334 270 566 3.4E-91 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Gene3D G3DSA:1.10.1420.10 266 407 4.7E-36 T 28-03-2018 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 SUPERFAMILY SSF53150 117 269 7.59E-43 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CO704_RS03735 a75435b152dd147f38a893d5b426f968 853 Gene3D G3DSA:3.40.1170.10 1 134 1.0E-46 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 Pfam PF13538 UvrD-like helicase C-terminal domain 515 566 1.5E-7 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 Pfam PF08378 Nuclease-related domain 4 104 3.5E-11 T 28-03-2018 IPR011528 Nuclease-related domain, NERD CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 Gene3D G3DSA:3.40.50.300 390 583 8.5E-31 T 28-03-2018 CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 Gene3D G3DSA:3.40.50.300 204 389 3.7E-23 T 28-03-2018 CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 Pfam PF13245 AAA domain 214 372 1.8E-7 T 28-03-2018 CO704_RS22030 cdad57975050f9b9084adb81ee3a38cc 594 SUPERFAMILY SSF52540 212 572 1.4E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 Pfam PF03466 LysR substrate binding domain 88 288 8.3E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 Gene3D G3DSA:3.40.190.10 88 178 5.5E-16 T 28-03-2018 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 SUPERFAMILY SSF53850 89 294 3.06E-34 T 28-03-2018 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 Gene3D G3DSA:3.40.190.10 179 260 2.3E-11 T 28-03-2018 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.4E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 Gene3D G3DSA:1.10.10.10 1 83 6.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07965 c220af0d72be4812082d8cdab867398a 305 SUPERFAMILY SSF46785 1 87 2.59E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06090 bec0098e01ed41bf44162a8a39294768 232 SUPERFAMILY SSF55120 11 230 1.6E-56 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06090 bec0098e01ed41bf44162a8a39294768 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06090 bec0098e01ed41bf44162a8a39294768 232 Pfam PF00849 RNA pseudouridylate synthase 26 180 4.0E-24 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06090 bec0098e01ed41bf44162a8a39294768 232 Gene3D G3DSA:3.30.2350.10 16 232 9.6E-53 T 28-03-2018 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.4E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.4E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.4E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 Pfam PF14849 YidC periplasmic domain 60 342 1.3E-86 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.548 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 8.9E-69 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 Pfam PF02096 60Kd inner membrane protein 353 532 4.3E-60 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 6.2E-114 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 216 234 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 250 265 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 157 177 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 461 483 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 498 521 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 323 343 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 414 437 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS24675 7149eed0db3519dbbe540d189f9ac33a 547 PRINTS PR00701 60kDa inner membrane protein signature 65 86 4.0E-106 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 Gene3D G3DSA:3.40.50.2300 1 136 4.5E-24 T 28-03-2018 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 Pfam PF00072 Response regulator receiver domain 3 112 7.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 SMART SM00448 1 112 2.4E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 SUPERFAMILY SSF52172 1 128 2.42E-25 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 Gene3D G3DSA:2.40.50.40 137 204 1.2E-17 T 28-03-2018 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 SMART SM00850 144 242 1.1E-37 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 Gene3D G3DSA:2.20.25.10 205 242 2.1E-17 T 28-03-2018 CO704_RS05980 258d5eb31acf38b9e199f49c75e0714d 243 Pfam PF04397 LytTr DNA-binding domain 145 241 1.5E-32 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 Gene3D G3DSA:2.40.170.20 178 741 7.6E-81 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 Pfam PF00593 TonB dependent receptor 276 738 5.9E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 51 741 1.1E-134 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 42 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 Gene3D G3DSA:2.170.130.10 42 177 5.6E-35 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 724 741 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 SUPERFAMILY SSF56935 35 741 6.11E-136 T 28-03-2018 CO704_RS18025 21e6255ef6c838ef54459ccda23ac1b9 741 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 164 2.6E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 Gene3D G3DSA:3.30.70.270 232 396 6.5E-40 T 28-03-2018 CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 243 391 5.5E-31 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 Gene3D G3DSA:3.30.450.20 64 168 2.7E-15 T 28-03-2018 CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 Pfam PF02743 Cache domain 21 157 2.5E-16 T 28-03-2018 IPR033479 Double Cache domain 1 CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 SMART SM00267 231 395 8.1E-28 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 SUPERFAMILY SSF55073 247 394 2.51E-35 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 395 1.5E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10185 366f4abe0a9a3cf9f10c07eafeede813 397 Gene3D G3DSA:3.30.450.20 8 63 2.0E-5 T 28-03-2018 CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 Gene3D G3DSA:3.40.50.300 1 200 1.0E-13 T 28-03-2018 CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 337 3.9E-28 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 Gene3D G3DSA:3.40.50.300 218 362 1.9E-12 T 28-03-2018 CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 PIRSF PIRSF029347 1 365 2.6E-138 T 28-03-2018 IPR014555 RecF-like CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 SUPERFAMILY SSF52540 241 347 8.87E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21075 3177a0e1598b38a51ea03f3780e2bb10 365 SUPERFAMILY SSF52540 1 191 8.87E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 SUPERFAMILY SSF50331 239 345 2.98E-12 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 Pfam PF00005 ABC transporter 18 164 2.8E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 SMART SM00382 27 214 1.6E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 Pfam PF12857 TOBE-like domain 289 339 2.2E-7 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 9.3E-128 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 Gene3D G3DSA:3.40.50.300 1 257 1.2E-76 T 28-03-2018 CO704_RS05805 c87b617a420a06afd00b8323bcbbcd89 361 SUPERFAMILY SSF52540 3 243 4.18E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 PIRSF PIRSF028103 5 180 7.4E-65 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 SUPERFAMILY SSF55021 5 86 9.16E-17 T 28-03-2018 CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 SUPERFAMILY SSF55021 93 179 2.56E-16 T 28-03-2018 CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 Pfam PF13740 ACT domain 7 82 2.3E-25 T 28-03-2018 CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 Gene3D G3DSA:3.30.70.260 92 181 1.7E-12 T 28-03-2018 CO704_RS05645 cdf36cffbdc8cc1f7b8a6addcdc342dc 184 Gene3D G3DSA:3.30.70.260 7 89 2.6E-11 T 28-03-2018 CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 Gene3D G3DSA:1.10.10.10 11 99 8.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.1E-42 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 SUPERFAMILY SSF46785 13 86 2.38E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 SMART SM00346 13 102 2.1E-36 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 Pfam PF09339 IclR helix-turn-helix domain 15 64 6.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 Gene3D G3DSA:3.30.450.40 100 262 5.0E-50 T 28-03-2018 IPR029016 GAF domain-like CO704_RS09065 41912e3e443cef810c41cdc61e3e46c3 263 SUPERFAMILY SSF55781 77 259 1.11E-52 T 28-03-2018 IPR029016 GAF domain-like CO704_RS07915 9032bc8beb0d75573acd0487d1c6a683 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 81 5.5E-16 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CO704_RS07915 9032bc8beb0d75573acd0487d1c6a683 101 SUPERFAMILY SSF54909 7 99 4.95E-28 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS07915 9032bc8beb0d75573acd0487d1c6a683 101 Gene3D G3DSA:3.30.70.100 2 100 7.4E-25 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SUPERFAMILY SSF53098 327 518 1.48E-55 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:3.30.70.370 754 928 3.5E-54 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:3.30.70.370 657 750 1.1E-17 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.8E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SUPERFAMILY SSF88723 7 170 8.13E-57 T 28-03-2018 IPR029060 PIN domain-like CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SMART SM00475 7 268 7.3E-142 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 2.0E-285 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SMART SM00474 330 517 1.5E-46 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Pfam PF00476 DNA polymerase family A 552 926 5.1E-158 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 4.1E-54 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SMART SM00482 686 892 4.0E-126 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:1.10.150.20 185 269 1.2E-24 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:3.30.420.10 321 542 1.9E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:1.20.1060.10 543 656 1.3E-31 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SUPERFAMILY SSF47807 171 291 4.64E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Pfam PF01612 3'-5' exonuclease 330 517 6.0E-44 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 5.7E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 Gene3D G3DSA:3.40.50.1010 7 184 1.3E-67 T 28-03-2018 IPR029060 PIN domain-like CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SUPERFAMILY SSF56672 523 928 7.23E-162 T 28-03-2018 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS23965 b750729c41dcc229673a472f68aaf62a 928 SMART SM00279 173 208 1.2E-13 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 TIGRFAM TIGR04030 perox_Avi_7169: alkylhydroperoxidase domain protein, Avi_7169 family 175 361 3.6E-87 T 28-03-2018 IPR023923 Alkylhydroperoxidase domain-containing protein, Avi7169 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 Gene3D G3DSA:1.20.1290.10 16 155 3.2E-12 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 SUPERFAMILY SSF69118 31 144 2.4E-17 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 Pfam PF02627 Carboxymuconolactone decarboxylase family 226 288 4.1E-13 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 196 361 1.2E-44 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 Gene3D G3DSA:1.20.1290.10 201 363 9.0E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 SUPERFAMILY SSF69118 184 362 4.65E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11760 bd8124dece5fa920af1cb309276cdffb 363 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 242 289 7.9E-12 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS25280 ec494944131cc08dd98035b658277a7d 459 Gene3D G3DSA:1.20.1600.10 21 453 4.5E-79 T 28-03-2018 CO704_RS25280 ec494944131cc08dd98035b658277a7d 459 Pfam PF02321 Outer membrane efflux protein 59 243 3.8E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS25280 ec494944131cc08dd98035b658277a7d 459 Pfam PF02321 Outer membrane efflux protein 272 445 7.5E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS25280 ec494944131cc08dd98035b658277a7d 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 450 1.6E-69 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CO704_RS25280 ec494944131cc08dd98035b658277a7d 459 SUPERFAMILY SSF56954 5 450 1.7E-84 T 28-03-2018 CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 Gene3D G3DSA:1.20.1250.20 15 225 1.8E-25 T 28-03-2018 CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 416 8.5E-143 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 SUPERFAMILY SSF103473 19 431 7.19E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 Gene3D G3DSA:1.20.1250.20 226 432 1.6E-19 T 28-03-2018 CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 Pfam PF07690 Major Facilitator Superfamily 62 384 1.1E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS04505 ad5ddc93b0d842b093b953ee1b0cd3f9 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS15455 4567bb95d9095c7fee3e8dd29f3e0431 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 1.7E-72 T 28-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 CO704_RS15455 4567bb95d9095c7fee3e8dd29f3e0431 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 5.4E-34 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CO704_RS15455 4567bb95d9095c7fee3e8dd29f3e0431 191 SUPERFAMILY SSF52218 1 168 1.2E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS15455 4567bb95d9095c7fee3e8dd29f3e0431 191 Gene3D G3DSA:3.40.50.360 1 177 1.7E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 2.9E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 2.9E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 2.9E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.9E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 2.9E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 Gene3D G3DSA:3.40.1690.10 216 351 2.3E-53 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 351 4.5E-108 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 345 4.7E-112 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS17575 ad7f3c8b1c9d299e6f41664b5fbbbfa9 379 SUPERFAMILY SSF160544 242 349 1.83E-37 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 SUPERFAMILY SSF51735 4 189 3.41E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.392 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 8.0E-117 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 PIRSF PIRSF000110 1 491 4.9E-181 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 4.2E-205 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 Gene3D G3DSA:3.40.50.720 7 187 1.6E-61 T 28-03-2018 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 6.5E-58 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 Gene3D G3DSA:3.30.360.10 188 490 7.8E-127 T 28-03-2018 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CO704_RS08935 21edcef776064d32b02647ae6870ad0b 491 SUPERFAMILY SSF55347 176 488 1.05E-113 T 28-03-2018 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 PRINTS PR00762 Chloride channel signature 169 188 5.2E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 PRINTS PR00762 Chloride channel signature 118 137 5.2E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 PRINTS PR00762 Chloride channel signature 363 379 5.2E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 Pfam PF00654 Voltage gated chloride channel 78 414 1.0E-63 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 Gene3D G3DSA:1.10.3080.10 8 422 1.3E-57 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS03170 850cf615c64d91cafaeba27bb260da8a 422 SUPERFAMILY SSF81340 11 418 3.4E-71 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS22340 12d5a4e845c80466a1835da753d1f8bb 194 PIRSF PIRSF020680 1 194 1.1E-63 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CO704_RS22340 12d5a4e845c80466a1835da753d1f8bb 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 3.0E-62 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CO704_RS22340 12d5a4e845c80466a1835da753d1f8bb 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 1.5E-58 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CO704_RS22340 12d5a4e845c80466a1835da753d1f8bb 194 SUPERFAMILY SSF159709 13 193 1.12E-57 T 28-03-2018 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 SUPERFAMILY SSF48113 31 431 6.19E-139 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Hamap MF_01961 Catalase-peroxidase [katG]. 13 723 38.739 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Pfam PF00141 Peroxidase 91 398 2.7E-48 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Pfam PF00141 Peroxidase 405 696 5.2E-35 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Gene3D G3DSA:1.10.420.10 590 698 1.4E-35 T 28-03-2018 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Gene3D G3DSA:1.10.420.10 234 399 1.7E-37 T 28-03-2018 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00458 Haem peroxidase superfamily signature 159 176 1.2E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00458 Haem peroxidase superfamily signature 320 335 1.2E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00458 Haem peroxidase superfamily signature 99 113 1.2E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00458 Haem peroxidase superfamily signature 177 189 1.2E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00458 Haem peroxidase superfamily signature 261 276 1.2E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Gene3D G3DSA:1.10.520.10 445 589 8.4E-36 T 28-03-2018 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 23 723 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 74 1.5E-47 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 76 101 1.5E-47 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 481 507 1.5E-47 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 35 57 1.5E-47 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 269 292 1.5E-47 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 SUPERFAMILY SSF48113 437 722 2.95E-101 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CO704_RS12055 3fe18363f15b467d35abc07785c278d7 724 Gene3D G3DSA:1.10.520.10 65 218 2.6E-35 T 28-03-2018 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.4E-75 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 9.5E-75 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Gene3D G3DSA:3.40.50.300 385 665 3.3E-52 T 28-03-2018 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Gene3D G3DSA:3.40.50.300 149 282 1.6E-32 T 28-03-2018 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Gene3D G3DSA:3.40.50.300 5 147 3.8E-27 T 28-03-2018 CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 SUPERFAMILY SSF52540 7 642 1.13E-181 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23205 d5dd41d5e11e654ea002c9218f492ad2 720 Gene3D G3DSA:3.40.50.300 283 384 6.4E-26 T 28-03-2018 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 PIRSF PIRSF036917 1 676 0.0 T 28-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 Gene3D G3DSA:3.20.20.80 173 573 1.3E-67 T 28-03-2018 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 Gene3D G3DSA:2.60.40.1180 645 674 0.11 T 28-03-2018 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 Gene3D G3DSA:3.20.20.80 574 644 7.4E-8 T 28-03-2018 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 SMART SM00642 193 637 1.7E-80 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 Pfam PF00128 Alpha amylase, catalytic domain 226 595 1.3E-37 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 SUPERFAMILY SSF51445 374 643 3.49E-73 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS24310 861d37d3533313b82a5022c8e0b7f132 676 SUPERFAMILY SSF51445 180 318 3.49E-73 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS17040 db3b1669170d2e885b90bee264328c4c 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 436 36.734 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CO704_RS17040 db3b1669170d2e885b90bee264328c4c 439 PIRSF PIRSF006060 1 436 1.5E-51 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS17040 db3b1669170d2e885b90bee264328c4c 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 1.7E-148 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CO704_RS17040 db3b1669170d2e885b90bee264328c4c 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 433 3.4E-246 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CO704_RS17040 db3b1669170d2e885b90bee264328c4c 439 Pfam PF13520 Amino acid permease 10 404 4.5E-50 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 Gene3D G3DSA:3.30.499.10 305 466 4.4E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 SUPERFAMILY SSF53732 2 465 9.81E-169 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 Gene3D G3DSA:3.40.1060.10 153 288 1.6E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.614 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 1.4E-275 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 Gene3D G3DSA:3.30.499.10 1 152 1.1E-40 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 1.4E-161 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 209 222 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 286 300 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 119 132 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 343 354 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 399 412 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 82 95 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 133 148 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 108 116 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19720 c89ed5793f505104e25a3accaebdc86d 466 PRINTS PR00415 Aconitase family signature 195 208 4.1E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 Gene3D G3DSA:3.20.20.80 3 477 5.6E-153 T 28-03-2018 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 1.7E-128 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 SUPERFAMILY SSF51445 3 470 3.02E-163 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 8.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 8.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 8.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 8.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS03055 a625cf27e4e6eac88d9058068e73e240 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 8.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 36 51 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 15 36 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 51 73 1.6E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 Pfam PF01313 Bacterial export proteins, family 3 3 74 5.0E-23 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 PIRSF PIRSF004669 1 85 5.1E-22 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS16120 caca0d31bd0fde284a7f9183d118edc7 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 2 81 1.8E-28 T 28-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 CO704_RS11415 d54c2508a6667aa96e7eda672ec21ff5 482 Pfam PF00324 Amino acid permease 32 472 1.5E-126 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS11415 d54c2508a6667aa96e7eda672ec21ff5 482 PIRSF PIRSF006060 18 482 9.7E-67 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS11415 d54c2508a6667aa96e7eda672ec21ff5 482 ProSitePatterns PS00218 Amino acid permeases signature. 57 87 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 Gene3D G3DSA:3.90.550.10 127 364 5.0E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 Gene3D G3DSA:2.40.10.220 547 654 2.6E-14 T 28-03-2018 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 Pfam PF03552 Cellulose synthase 302 435 2.7E-9 T 28-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 Pfam PF07238 PilZ domain 550 644 5.0E-9 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 SUPERFAMILY SSF141371 551 644 8.83E-8 T 28-03-2018 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 3 674 1.4E-259 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 SUPERFAMILY SSF53448 109 405 6.91E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 1.9E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CO704_RS24455 66d9229ee94716403c2e7e69ec1cf1ca 706 Pfam PF00535 Glycosyl transferase family 2 130 301 1.6E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 Pfam PF00854 POT family 108 437 1.1E-29 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 Gene3D G3DSA:1.20.1250.20 17 195 2.3E-16 T 28-03-2018 CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 SUPERFAMILY SSF103473 253 481 1.22E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 SUPERFAMILY SSF103473 19 197 1.22E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 Gene3D G3DSA:1.20.1250.20 196 270 0.098 T 28-03-2018 CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 Gene3D G3DSA:1.20.1250.20 271 491 9.2E-17 T 28-03-2018 CO704_RS13305 31d72501d9eed4d56ddab309171a1154 491 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 483 4.6E-61 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 Gene3D G3DSA:3.40.1060.10 157 291 1.4E-37 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 ProSitePatterns PS00450 Aconitase family signature 1. 342 358 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 467 4.1E-188 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 Gene3D G3DSA:3.30.499.10 310 474 8.3E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 SUPERFAMILY SSF53732 2 468 3.01E-153 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 212 225 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 402 415 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 122 135 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 85 98 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 198 211 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 289 303 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 136 151 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 PRINTS PR00415 Aconitase family signature 346 357 7.7E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 Pfam PF00330 Aconitase family (aconitate hydratase) 8 460 1.4E-137 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 Gene3D G3DSA:3.30.499.10 1 156 1.1E-34 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11075 3cded6b07c4b7cf39cee3232b4b6e85a 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 469 53.918 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 Gene3D G3DSA:3.40.50.1100 130 303 1.4E-48 T 28-03-2018 CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 6.7E-66 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 SUPERFAMILY SSF53686 6 292 5.5E-91 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 Gene3D G3DSA:3.40.50.1100 19 129 4.2E-35 T 28-03-2018 CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 9.6E-126 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 6.3E-160 T 28-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CO704_RS05810 a65011bec05ae05f96d2ddaa189233c4 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 SUPERFAMILY SSF56837 23 224 2.88E-70 T 28-03-2018 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 ProSitePatterns PS00276 Channel forming colicins signature. 150 161 - T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 Pfam PF01024 Colicin pore forming domain 28 220 1.2E-36 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 PRINTS PR00280 Channel forming colicin signature 92 108 7.0E-12 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 PRINTS PR00280 Channel forming colicin signature 164 182 7.0E-12 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 PRINTS PR00280 Channel forming colicin signature 150 163 7.0E-12 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 PRINTS PR00280 Channel forming colicin signature 73 88 7.0E-12 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 Gene3D G3DSA:1.10.490.30 29 222 8.1E-60 T 28-03-2018 CO704_RS20355 bff319b3948a5f5b54101fddd4adff1a 227 ProDom PD002657 PLASMID COLICIN BACTERIOCIN TRANSMEMBRANE ANTIBIOTIC MEMBRANE ANTIMICROBIAL E1 IB 3D-STRUCTURE 29 222 5.0E-62 T 28-03-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 CO704_RS10635 122e7afbe34ac01793ca5d7402e4b208 990 PIRSF PIRSF034585 1 990 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB CO704_RS10635 122e7afbe34ac01793ca5d7402e4b208 990 Gene3D G3DSA:3.30.420.40 246 572 7.9E-5 T 28-03-2018 CO704_RS10635 122e7afbe34ac01793ca5d7402e4b208 990 Pfam PF07520 Virulence factor SrfB 1 987 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB CO704_RS10635 122e7afbe34ac01793ca5d7402e4b208 990 Gene3D G3DSA:3.30.420.40 573 792 3.1E-4 T 28-03-2018 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF81665 279 372 1.57E-97 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF81665 51 162 1.57E-97 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF81665 695 903 1.57E-97 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Pfam PF00689 Cation transporting ATPase, C-terminus 729 895 2.8E-14 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 42 905 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 660 2.5E-21 T 28-03-2018 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 412 425 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 754 767 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 859 880 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 291 307 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 704 719 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 809 830 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 308 327 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 722 733 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 PRINTS PR01836 Magnesium-transporting ATPase signature 774 790 6.5E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SMART SM00831 50 123 4.1E-6 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 735 1.1E-30 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 413 1.8E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Pfam PF00690 Cation transporter/ATPase, N-terminus 52 118 9.0E-14 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Pfam PF00122 E1-E2 ATPase 165 358 1.2E-43 T 28-03-2018 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF81653 177 277 1.57E-28 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Gene3D G3DSA:3.40.1110.10 341 553 7.3E-38 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Gene3D G3DSA:1.20.1110.10 568 901 2.5E-56 T 28-03-2018 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 Gene3D G3DSA:2.70.150.10 63 279 1.9E-43 T 28-03-2018 CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF56784 544 686 1.78E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF56784 366 390 1.78E-36 T 28-03-2018 IPR023214 HAD-like domain CO704_RS01940 c932936386994839c99cf19e6ef0128e 905 SUPERFAMILY SSF81660 347 550 2.35E-41 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.5E-55 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 SUPERFAMILY SSF53137 15 129 5.23E-48 T 28-03-2018 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 Gene3D G3DSA:3.30.420.80 5 129 2.9E-45 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.632 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 PIRSF PIRSF002131 1 129 2.4E-52 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site CO704_RS01210 ec75b57c51410f655cdfb2fc9955940d 129 Pfam PF00411 Ribosomal protein S11 19 128 2.3E-54 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CO704_RS23125 55307092eaef08937127c7be42359710 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 255 1.3E-107 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CO704_RS23125 55307092eaef08937127c7be42359710 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 39.428 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CO704_RS23125 55307092eaef08937127c7be42359710 256 SUPERFAMILY SSF53335 24 254 4.96E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS23125 55307092eaef08937127c7be42359710 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CO704_RS23125 55307092eaef08937127c7be42359710 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 9.4E-88 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CO704_RS23125 55307092eaef08937127c7be42359710 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CO704_RS23125 55307092eaef08937127c7be42359710 256 Gene3D G3DSA:3.40.50.150 3 255 1.7E-48 T 28-03-2018 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 SUPERFAMILY SSF52313 6 235 3.66E-96 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.0E-108 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 Pfam PF00318 Ribosomal protein S2 9 224 4.0E-94 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.294 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19310 8fd47b298796e941dc8f5aeec4cf89de 241 Gene3D G3DSA:3.40.50.10490 5 241 2.6E-96 T 28-03-2018 CO704_RS18435 058c792ec3e512ce1ec32685ccc298c2 303 SUPERFAMILY SSF53067 3 299 2.88E-61 T 28-03-2018 CO704_RS18435 058c792ec3e512ce1ec32685ccc298c2 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS18435 058c792ec3e512ce1ec32685ccc298c2 303 Gene3D G3DSA:3.30.420.40 116 300 1.1E-48 T 28-03-2018 CO704_RS18435 058c792ec3e512ce1ec32685ccc298c2 303 Pfam PF00480 ROK family 3 300 4.9E-92 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS18435 058c792ec3e512ce1ec32685ccc298c2 303 Gene3D G3DSA:3.30.420.40 1 115 6.1E-19 T 28-03-2018 CO704_RS10715 42a12236ac9eb31cfaf361556df67adf 523 SUPERFAMILY SSF48371 113 219 4.29E-11 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 CO704_RS10715 42a12236ac9eb31cfaf361556df67adf 523 Gene3D G3DSA:1.25.40.70 99 165 0.14 T 28-03-2018 CO704_RS10715 42a12236ac9eb31cfaf361556df67adf 523 Gene3D G3DSA:1.10.3470.10 188 510 2.1E-49 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS10715 42a12236ac9eb31cfaf361556df67adf 523 Pfam PF02653 Branched-chain amino acid transport system / permease component 231 506 4.6E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS10715 42a12236ac9eb31cfaf361556df67adf 523 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 229 520 2.8E-127 T 28-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 317 3.7E-52 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 1.2E-87 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 Gene3D G3DSA:3.40.50.1100 48 144 2.5E-32 T 28-03-2018 CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 Gene3D G3DSA:3.40.50.1100 145 332 6.1E-30 T 28-03-2018 CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 PIRSF PIRSF006278 1 332 1.0E-85 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CO704_RS11520 d2e31dc864da686e65f006abb7a86e9e 332 SUPERFAMILY SSF53686 7 324 5.37E-83 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 Gene3D G3DSA:1.10.357.10 59 194 4.9E-17 T 28-03-2018 CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 SUPERFAMILY SSF48498 83 192 5.56E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 Gene3D G3DSA:1.10.10.60 3 58 1.7E-11 T 28-03-2018 CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 SUPERFAMILY SSF46689 8 75 7.48E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 61 3.6E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS23830 646e636d66406375754c1bfde0e046a8 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.839 T 28-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 6.9E-163 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 SUPERFAMILY SSF102114 52 316 2.88E-70 T 28-03-2018 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 SMART SM00729 84 293 5.5E-18 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 Pfam PF04055 Radical SAM superfamily 91 251 6.0E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 3.4E-7 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 158.461 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 Gene3D G3DSA:3.20.20.70 28 303 9.0E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS17280 3fd0136a33c1fa3153c5f96b4d5c8afd 321 PIRSF PIRSF005963 3 321 2.9E-132 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CO704_RS14035 51a47f2d07681357c059a7fbc03717c3 211 SUPERFAMILY SSF52499 2 209 1.13E-51 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS14035 51a47f2d07681357c059a7fbc03717c3 211 Gene3D G3DSA:3.40.50.850 1 211 8.8E-62 T 28-03-2018 CO704_RS14035 51a47f2d07681357c059a7fbc03717c3 211 Pfam PF00857 Isochorismatase family 5 206 2.3E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS25685 4802061131d77abac41cf77417e55e37 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 1.1E-132 T 28-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS25685 4802061131d77abac41cf77417e55e37 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0016 T 28-03-2018 CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 SUPERFAMILY SSF51735 3 242 1.02E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS25685 4802061131d77abac41cf77417e55e37 243 Gene3D G3DSA:3.40.50.720 2 160 2.8E-39 T 28-03-2018 CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25685 4802061131d77abac41cf77417e55e37 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 8.3E-54 T 28-03-2018 CO704_RS25685 4802061131d77abac41cf77417e55e37 243 Gene3D G3DSA:3.40.50.720 161 242 1.3E-19 T 28-03-2018 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 47.51 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 Gene3D G3DSA:3.40.640.10 57 270 1.9E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 Gene3D G3DSA:3.90.1150.10 271 382 7.4E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 SUPERFAMILY SSF53383 30 380 2.1E-107 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 378 3.7E-138 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CO704_RS16475 92605a67ab21be6eee3afd44941a6702 383 Pfam PF00155 Aminotransferase class I and II 40 378 1.3E-63 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 454 7.5E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 Gene3D G3DSA:3.30.70.270 294 465 3.6E-45 T 28-03-2018 CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 SMART SM00267 289 459 4.0E-39 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 Gene3D G3DSA:3.20.20.450 466 713 1.2E-87 T 28-03-2018 IPR001633 EAL domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 Pfam PF00563 EAL domain 475 705 2.1E-68 T 28-03-2018 IPR001633 EAL domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 SMART SM00052 469 710 5.8E-102 T 28-03-2018 IPR001633 EAL domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 SUPERFAMILY SSF141868 474 713 1.07E-80 T 28-03-2018 IPR001633 EAL domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 458 4.7E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 SUPERFAMILY SSF55073 305 460 5.89E-37 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS12690 6a794b16b3d09fe7a5a722bc2af75340 717 Pfam PF05228 CHASE4 domain 61 221 3.2E-10 T 28-03-2018 IPR007892 CHASE4 CO704_RS02390 75ff5898b5be8628de6aedd3678d4fcb 200 Gene3D G3DSA:1.10.10.10 23 194 8.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02390 75ff5898b5be8628de6aedd3678d4fcb 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 1.8E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02390 75ff5898b5be8628de6aedd3678d4fcb 200 SMART SM00421 134 191 0.0045 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02390 75ff5898b5be8628de6aedd3678d4fcb 200 SUPERFAMILY SSF46894 130 191 1.29E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 Pfam PF01472 PUA domain 276 350 3.9E-22 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 1.0E-155 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 SMART SM00359 276 359 4.7E-22 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 Gene3D G3DSA:3.40.1160.10 1 265 8.0E-66 T 28-03-2018 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 4.7E-57 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 4.7E-57 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 4.7E-57 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 4.7E-57 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 4.7E-57 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 Pfam PF00696 Amino acid kinase family 6 234 1.2E-45 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 SUPERFAMILY SSF53633 6 256 1.06E-67 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 SUPERFAMILY SSF88697 276 366 3.92E-24 T 28-03-2018 IPR015947 PUA-like domain CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 PIRSF PIRSF000729 1 367 8.6E-147 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 36.515 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18945 9414e84bf9b617dc1a05655bf62a25d2 367 Gene3D G3DSA:2.30.130.10 274 366 1.5E-29 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS14740 9a3f37670eafb1d620ccef8f776c206d 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 5.1E-13 T 28-03-2018 IPR024494 Protein of unknown function DUF2770 CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 SUPERFAMILY SSF52080 4 143 1.7E-47 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 7.6E-52 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.5E-32 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.366 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 Gene3D G3DSA:3.100.10.10 42 144 7.2E-26 T 28-03-2018 CO704_RS01190 f0fd6f16c27dad97872f8aa45aaf17e3 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS09580 a1980b2f10178fa6b2171dcb4d11a61c 519 Pfam PF17482 Phage tail sheath C-terminal domain 410 514 1.4E-9 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 6.5E-40 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 Gene3D G3DSA:1.10.287.10 2 89 9.7E-37 T 28-03-2018 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.32 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 SMART SM01387 8 88 3.1E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 Pfam PF00312 Ribosomal protein S15 8 88 1.4E-37 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-38 T 28-03-2018 CO704_RS01820 fec12333696fe891e7c12179f54b183e 89 SUPERFAMILY SSF47060 3 89 5.3E-35 T 28-03-2018 IPR009068 S15/NS1, RNA-binding CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 Gene3D G3DSA:3.30.70.360 178 295 1.4E-26 T 28-03-2018 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 Pfam PF07687 Peptidase dimerisation domain 171 280 8.1E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 SUPERFAMILY SSF53187 303 375 4.0E-58 T 28-03-2018 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 SUPERFAMILY SSF53187 3 174 4.0E-58 T 28-03-2018 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 375 2.2E-116 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 Pfam PF01546 Peptidase family M20/M25/M40 67 375 9.0E-34 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 SUPERFAMILY SSF55031 175 277 5.53E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 101 138 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS08225 15ea49788d95e49c3f81a58ce8400e46 382 Gene3D G3DSA:3.40.630.10 1 177 3.1E-31 T 28-03-2018 CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 PIRSF PIRSF006171 1 230 4.1E-82 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 SMART SM00448 2 117 3.0E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 SUPERFAMILY SSF52172 3 133 7.68E-30 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 Gene3D G3DSA:1.10.10.10 151 232 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 Pfam PF00072 Response regulator receiver domain 4 117 8.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18640 c090f5268803f2a6e9a0d2cbcd87f030 239 Gene3D G3DSA:3.40.50.2300 1 143 2.0E-28 T 28-03-2018 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 SMART SM01003 9 142 5.2E-75 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 SMART SM01002 151 316 5.5E-86 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 9 35 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 431 513 5.4E-36 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 175 200 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 SUPERFAMILY SSF51735 142 322 8.27E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 Gene3D G3DSA:3.40.50.720 6 199 5.6E-50 T 28-03-2018 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 PIRSF PIRSF000203 6 513 4.2E-280 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 146 373 2.5E-76 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 SUPERFAMILY SSF52283 6 173 3.66E-56 T 28-03-2018 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 Gene3D G3DSA:3.40.50.720 200 382 3.3E-57 T 28-03-2018 CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 9 142 9.3E-51 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CO704_RS13205 f9cdb2c989de568f2cbc5c3ff6cada6b 514 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 7 514 4.2E-299 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CO704_RS16455 26e9665cf473114f84bd7aacde83a653 172 Gene3D G3DSA:1.10.10.10 85 137 3.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19825 db65b9db427be5ea76477e3efffb3408 176 SUPERFAMILY SSF52218 2 170 3.26E-49 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS19825 db65b9db427be5ea76477e3efffb3408 176 Pfam PF02525 Flavodoxin-like fold 2 167 9.5E-42 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS19825 db65b9db427be5ea76477e3efffb3408 176 Gene3D G3DSA:3.40.50.360 1 176 8.1E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS19825 db65b9db427be5ea76477e3efffb3408 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 52.794 T 28-03-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CO704_RS19280 e636229a111bb508a7f85b6ecd32c2de 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CO704_RS19280 e636229a111bb508a7f85b6ecd32c2de 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.2E-69 T 28-03-2018 CO704_RS08215 231b1ae5bab6eda64e424146ac59ceed 422 Pfam PF05231 MASE1 15 300 2.5E-18 T 28-03-2018 IPR007895 MASE1 CO704_RS08215 231b1ae5bab6eda64e424146ac59ceed 422 Gene3D G3DSA:3.30.450.20 305 370 4.0E-5 T 28-03-2018 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 175 187 1.3E-10 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 55 64 1.3E-10 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 127 141 1.3E-10 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 127 1.3E-10 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 243 253 1.3E-10 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 182 197 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 59 252 1.2E-72 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 Pfam PF00813 FliP family 59 249 2.1E-74 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 252 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 76 96 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 182 202 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 76 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 96 115 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17560 69a158ff56cfe90e8c6a2cd304258644 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 203 224 1.8E-66 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS17890 b53510fed5d63bbbbdff9661b42a06cb 86 SUPERFAMILY SSF159871 4 86 2.49E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS17890 b53510fed5d63bbbbdff9661b42a06cb 86 Gene3D G3DSA:3.30.1660.10 21 86 3.0E-18 T 28-03-2018 IPR025543 Dodecin-like CO704_RS17890 b53510fed5d63bbbbdff9661b42a06cb 86 Pfam PF07338 Protein of unknown function (DUF1471) 32 86 9.7E-13 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS11510 e87892a80de5008ebaab2bcccc57949d 304 SUPERFAMILY SSF161098 90 289 3.79E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11510 e87892a80de5008ebaab2bcccc57949d 304 Gene3D G3DSA:1.10.3720.10 2 292 2.8E-45 T 28-03-2018 CO704_RS11510 e87892a80de5008ebaab2bcccc57949d 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 1.6E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17360 8e8c010bc6238ac5c6247af5656e28e2 315 Gene3D G3DSA:3.30.1330.60 103 300 1.6E-27 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS17360 8e8c010bc6238ac5c6247af5656e28e2 315 Pfam PF00691 OmpA family 176 265 4.2E-14 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS17360 8e8c010bc6238ac5c6247af5656e28e2 315 SUPERFAMILY SSF103088 161 279 3.27E-19 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS17360 8e8c010bc6238ac5c6247af5656e28e2 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 66 2.4E-14 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain CO704_RS03940 969c8195abbe7b5ce63f4b92d8981081 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 304 3.0E-54 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS03940 969c8195abbe7b5ce63f4b92d8981081 330 Gene3D G3DSA:3.40.190.10 22 155 3.3E-15 T 28-03-2018 CO704_RS03940 969c8195abbe7b5ce63f4b92d8981081 330 Gene3D G3DSA:3.40.190.10 156 326 1.1E-35 T 28-03-2018 CO704_RS03940 969c8195abbe7b5ce63f4b92d8981081 330 SUPERFAMILY SSF53850 24 329 7.6E-93 T 28-03-2018 CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 2 359 61.933 T 28-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 Pfam PF11873 Domain of unknown function (DUF3393) 5 192 1.5E-75 T 28-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 SUPERFAMILY SSF53955 157 359 8.16E-36 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 Pfam PF01464 Transglycosylase SLT domain 196 319 8.1E-32 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS02735 31a663d765816f9eabc2cf121eb02a49 360 Gene3D G3DSA:1.10.530.10 183 357 5.7E-35 T 28-03-2018 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Gene3D G3DSA:2.30.40.10 237 358 1.7E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 SUPERFAMILY SSF51556 75 325 5.95E-17 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Gene3D G3DSA:3.20.20.140 80 236 3.9E-10 T 28-03-2018 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Pfam PF01979 Amidohydrolase family 72 356 2.4E-19 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Pfam PF13382 Adenine deaminase C-terminal domain 409 575 2.1E-42 T 28-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Gene3D G3DSA:2.30.40.10 18 79 4.2E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 Hamap MF_01518 Adenine deaminase [ade]. 21 579 30.312 T 28-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 SUPERFAMILY SSF51338 325 364 1.45E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS20255 760acee0e86635dba0bc0e7a9fde2ec0 595 SUPERFAMILY SSF51338 15 75 1.45E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS19625 4ef15c2bd980cd0dce781cf959f060fa 278 Pfam PF08478 POTRA domain, FtsQ-type 57 126 4.7E-21 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type CO704_RS19625 4ef15c2bd980cd0dce781cf959f060fa 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 255 25.996 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CO704_RS19625 4ef15c2bd980cd0dce781cf959f060fa 278 Pfam PF03799 Cell division protein FtsQ 130 247 7.2E-27 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB CO704_RS03130 cc7fa6c48dc7820ac495f2b959ecb63e 2524 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 90 211 3.1E-17 T 28-03-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein CO704_RS01385 d9f996f0ee13a97eea3e0ed11704a2ba 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 3.0E-12 T 28-03-2018 IPR010398 Protein of unknown function DUF997 CO704_RS01385 d9f996f0ee13a97eea3e0ed11704a2ba 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.5E-30 T 28-03-2018 IPR010398 Protein of unknown function DUF997 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 SUPERFAMILY SSF46689 212 257 4.66E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 SMART SM00342 174 256 5.9E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 Gene3D G3DSA:1.10.10.60 215 260 2.3E-8 T 28-03-2018 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 Gene3D G3DSA:2.60.120.10 14 106 9.0E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 SUPERFAMILY SSF51182 33 183 5.34E-9 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 Gene3D G3DSA:1.10.10.60 144 214 2.5E-8 T 28-03-2018 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 7.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 7.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS14150 2db7eb9da0fcb2fc750e33cae3ada674 266 Pfam PF12833 Helix-turn-helix domain 180 256 2.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 SUPERFAMILY SSF52540 1 240 1.82E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 Gene3D G3DSA:3.30.70.260 254 339 2.2E-19 T 28-03-2018 CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 Gene3D G3DSA:3.40.50.300 1 253 5.9E-77 T 28-03-2018 CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 Pfam PF09383 NIL domain 266 336 1.1E-16 T 28-03-2018 IPR018449 NIL domain CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 SMART SM00930 263 337 3.0E-22 T 28-03-2018 IPR018449 NIL domain CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 Pfam PF00005 ABC transporter 21 169 2.3E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 SMART SM00382 30 218 2.7E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 SUPERFAMILY SSF55021 254 339 3.78E-18 T 28-03-2018 CO704_RS12920 c04252551fe6a56665e7a31cfc1ad9a7 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.1E-29 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 PIRSF PIRSF000732 1 574 2.1E-218 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Gene3D G3DSA:3.20.20.60 250 573 1.3E-102 T 28-03-2018 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Gene3D G3DSA:1.10.274.10 24 145 2.1E-34 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-31 T 28-03-2018 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-31 T 28-03-2018 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-31 T 28-03-2018 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-31 T 28-03-2018 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 SUPERFAMILY SSF51621 249 549 4.45E-110 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 2.1E-126 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 9.3E-268 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 SUPERFAMILY SSF47831 23 143 1.27E-32 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 Gene3D G3DSA:3.50.30.10 146 245 4.3E-27 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS05830 277620c9fab05c9abafca4d6ea7d21ee 575 SUPERFAMILY SSF52009 125 246 2.62E-37 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 SUPERFAMILY SSF64518 1 274 1.44E-69 T 28-03-2018 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 128 6.7E-37 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 Gene3D G3DSA:1.20.1330.10 29 247 1.1E-53 T 28-03-2018 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 191 274 2.1E-20 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 PRINTS PR00207 Flagellin signature 26 43 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 PRINTS PR00207 Flagellin signature 65 84 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS17400 921772bf1b0bb7f48345a4ba388d1d50 275 PRINTS PR00207 Flagellin signature 100 123 3.1E-20 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 SUPERFAMILY SSF51905 267 384 3.27E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 SUPERFAMILY SSF51905 4 176 3.27E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 Pfam PF01494 FAD binding domain 4 343 1.2E-29 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 Gene3D G3DSA:3.50.50.60 1 364 5.9E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 8.1E-20 T 28-03-2018 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 8.1E-20 T 28-03-2018 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.1E-20 T 28-03-2018 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 8.1E-20 T 28-03-2018 CO704_RS03005 a2a3e8a7a8feeccd3d13b7e8b4de0740 399 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 4.3E-133 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 SUPERFAMILY SSF56655 1 261 1.13E-84 T 28-03-2018 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 Gene3D G3DSA:3.40.190.80 146 267 3.2E-36 T 28-03-2018 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 Pfam PF00459 Inositol monophosphatase family 2 261 3.6E-73 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.9E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 Gene3D G3DSA:3.30.540.10 1 145 1.8E-48 T 28-03-2018 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 4.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 4.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 4.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CO704_RS04895 815f8aad35ba7029683b8aa217f37559 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 4.7E-37 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 2.6E-116 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Gene3D G3DSA:3.30.465.10 69 218 7.6E-47 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 90.238 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 SUPERFAMILY SSF56194 202 338 1.44E-51 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 SUPERFAMILY SSF56176 4 196 1.1E-44 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Pfam PF01565 FAD binding domain 18 149 5.4E-23 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Gene3D G3DSA:3.90.78.10 221 334 1.7E-41 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Gene3D G3DSA:3.30.43.10 3 68 2.9E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CO704_RS23010 a048f2dc14cdc1231ba4aa9b7e240a3c 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 328 3.3E-34 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 2.3E-79 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 Gene3D G3DSA:3.30.70.1350 207 290 7.1E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 SUPERFAMILY SSF160240 209 288 7.85E-26 T 28-03-2018 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 SUPERFAMILY SSF161111 8 207 6.67E-52 T 28-03-2018 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 Pfam PF01545 Cation efflux family 14 206 7.2E-46 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.7E-26 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 63.305 T 28-03-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 CO704_RS23670 8c2b5c3ddf0aa95f3726f3f24b7b20fd 300 Gene3D G3DSA:1.20.1510.10 8 206 3.0E-42 T 28-03-2018 CO704_RS08035 7fa4f3457a8d66841f8105b96584992d 86 Pfam PF01381 Helix-turn-helix 6 64 4.0E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS08035 7fa4f3457a8d66841f8105b96584992d 86 SMART SM00530 5 64 7.8E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS08035 7fa4f3457a8d66841f8105b96584992d 86 Gene3D G3DSA:1.10.260.40 1 75 5.9E-14 T 28-03-2018 CO704_RS08035 7fa4f3457a8d66841f8105b96584992d 86 SUPERFAMILY SSF47413 2 70 1.38E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS02220 2700f05c3111cdcf24922537b014b6c0 91 Gene3D G3DSA:1.10.260.40 1 70 1.6E-13 T 28-03-2018 CO704_RS02220 2700f05c3111cdcf24922537b014b6c0 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 77 5.1E-34 T 28-03-2018 CO704_RS02220 2700f05c3111cdcf24922537b014b6c0 91 SUPERFAMILY SSF47413 2 69 9.38E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 SUPERFAMILY SSF47413 6 59 1.3E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.0E-157 T 28-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 PIRSF PIRSF004776 2 410 2.7E-212 T 28-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 4.6E-19 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 Gene3D G3DSA:1.10.260.40 5 61 1.0E-9 T 28-03-2018 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 SUPERFAMILY SSF52374 64 229 9.92E-20 T 28-03-2018 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 Pfam PF13521 AAA domain 234 394 6.5E-30 T 28-03-2018 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 Pfam PF01381 Helix-turn-helix 7 58 2.6E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 Gene3D G3DSA:3.40.50.620 63 230 1.8E-21 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 Gene3D G3DSA:3.40.50.300 231 399 1.3E-12 T 28-03-2018 CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 SUPERFAMILY SSF52540 232 386 3.84E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20060 8079c306dcd10bc8b6443cf1d41ea8f4 410 SMART SM00530 6 62 1.0E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 SUPERFAMILY SSF47384 153 234 8.24E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 8.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 8.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 8.0E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 388 2.2E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 SMART SM00388 170 233 1.2E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 Gene3D G3DSA:1.10.287.130 137 227 5.4E-7 T 28-03-2018 CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 SMART SM00387 278 390 1.2E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 SUPERFAMILY SSF55874 222 390 4.06E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS15145 a4c7282c66453c9e12ee3abdcc3fbbe8 395 Gene3D G3DSA:3.30.565.10 228 390 1.4E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 9.8E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 SMART SM00345 28 87 1.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 Pfam PF07702 UTRA domain 108 242 7.9E-33 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 Gene3D G3DSA:1.10.10.10 7 86 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 SUPERFAMILY SSF46785 19 89 2.34E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 Gene3D G3DSA:3.40.1410.10 87 247 2.4E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 SUPERFAMILY SSF64288 75 246 1.73E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS07310 0c00b264b11d2ec55a05037f464b1ebe 248 SMART SM00866 107 243 5.3E-29 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 SUPERFAMILY SSF53850 27 256 1.66E-48 T 28-03-2018 CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 SMART SM00062 36 265 1.4E-58 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 Gene3D G3DSA:3.40.190.10 143 223 5.8E-13 T 28-03-2018 CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 Gene3D G3DSA:3.40.190.10 26 142 9.1E-20 T 28-03-2018 CO704_RS01355 53173822c8ae46417dc77472a91100d0 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 1.3E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 Gene3D G3DSA:3.40.190.10 118 218 3.8E-31 T 28-03-2018 CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 7.1E-49 T 28-03-2018 CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 SUPERFAMILY SSF53850 28 255 4.58E-68 T 28-03-2018 CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 PIRSF PIRSF004846 1 258 3.7E-79 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 Gene3D G3DSA:3.40.190.10 23 117 1.6E-17 T 28-03-2018 CO704_RS16520 76f3b40e5e1e20a69fbce557b147d1e8 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.4E-80 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 Gene3D G3DSA:3.40.190.10 182 272 2.3E-24 T 28-03-2018 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 Gene3D G3DSA:1.10.10.10 7 87 4.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 7.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 Pfam PF03466 LysR substrate binding domain 94 297 5.6E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 SUPERFAMILY SSF46785 13 86 2.36E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 Gene3D G3DSA:3.40.190.10 97 181 1.7E-17 T 28-03-2018 CO704_RS11195 c10e1983d0f46f4cf6a23a4ec65ff993 302 SUPERFAMILY SSF53850 95 301 4.96E-45 T 28-03-2018 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 SMART SM00900 392 464 6.4E-4 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Pfam PF04205 FMN-binding domain 395 461 1.9E-6 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Gene3D G3DSA:3.20.20.70 1 353 2.5E-95 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Gene3D G3DSA:3.50.50.60 465 747 5.8E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Gene3D G3DSA:3.90.700.10 748 856 2.1E-35 T 28-03-2018 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 SUPERFAMILY SSF51905 467 736 1.6E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 SUPERFAMILY SSF51905 864 922 1.6E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 869 891 2.3E-5 T 28-03-2018 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 484 503 2.3E-5 T 28-03-2018 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Pfam PF00890 FAD binding domain 483 905 9.1E-84 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 339 1.2E-71 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 SUPERFAMILY SSF56425 714 860 1.36E-45 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 483 917 6.4E-156 T 28-03-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CO704_RS18205 3c40270e3c243b2e9e5490cfafedbfac 925 SUPERFAMILY SSF51395 5 346 6.54E-94 T 28-03-2018 CO704_RS00920 65f62b38e27036aee837967e2a533e63 108 Gene3D G3DSA:2.102.10.10 1 108 2.8E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CO704_RS00920 65f62b38e27036aee837967e2a533e63 108 SUPERFAMILY SSF50022 1 107 2.85E-37 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CO704_RS00920 65f62b38e27036aee837967e2a533e63 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 4.9E-42 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CO704_RS00920 65f62b38e27036aee837967e2a533e63 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 2.8E-39 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CO704_RS17510 2ff1dcd1ab3a3eea1f471e2a074f381a 470 Pfam PF00535 Glycosyl transferase family 2 30 144 1.8E-15 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS17510 2ff1dcd1ab3a3eea1f471e2a074f381a 470 SUPERFAMILY SSF53448 20 197 7.88E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS17510 2ff1dcd1ab3a3eea1f471e2a074f381a 470 Gene3D G3DSA:3.90.550.10 4 229 1.1E-20 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 Gene3D G3DSA:3.40.190.10 146 300 9.5E-38 T 28-03-2018 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PIRSF PIRSF019574 1 348 1.8E-130 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 Gene3D G3DSA:3.40.190.10 17 145 2.1E-21 T 28-03-2018 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 312 3.5E-37 T 28-03-2018 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 SUPERFAMILY SSF53850 27 345 1.22E-92 T 28-03-2018 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS14375 d4a68cd4c608e895659ebd27e2a5a6e4 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 9.5E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS16975 46f51889b14769bb7ee46587cfa0a479 602 Pfam PF10145 Phage-related minor tail protein 246 434 1.0E-11 T 28-03-2018 IPR010090 Phage tail tape measure protein CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 SUPERFAMILY SSF103473 2 182 4.32E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 SUPERFAMILY SSF103473 233 438 4.32E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 ProSitePatterns PS00216 Sugar transport proteins signature 1. 55 71 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 Pfam PF07690 Major Facilitator Superfamily 7 394 3.1E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 Gene3D G3DSA:1.20.1250.20 1 182 1.6E-25 T 28-03-2018 CO704_RS04045 76d040577bc45710153bda5bdf98e23b 442 Gene3D G3DSA:1.20.1250.20 244 439 2.7E-17 T 28-03-2018 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 SUPERFAMILY SSF53098 3 156 2.3E-55 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 1.2E-84 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.598 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 9.5E-67 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 Gene3D G3DSA:3.30.420.10 2 160 2.0E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS08855 d16b0083021cf4bcc4951cbfe175843a 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.6E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CO704_RS00345 f41f4ed3a5829207571080285d2315b0 250 SUPERFAMILY SSF53335 5 246 7.8E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS00345 f41f4ed3a5829207571080285d2315b0 250 Gene3D G3DSA:3.40.50.150 57 250 8.4E-35 T 28-03-2018 CO704_RS00345 f41f4ed3a5829207571080285d2315b0 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.7E-107 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CO704_RS00345 f41f4ed3a5829207571080285d2315b0 250 Gene3D G3DSA:3.40.1630.10 3 56 4.2E-23 T 28-03-2018 CO704_RS00345 f41f4ed3a5829207571080285d2315b0 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 38.344 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Gene3D G3DSA:3.10.150.10 124 247 4.8E-33 T 28-03-2018 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Gene3D G3DSA:3.10.150.10 248 366 5.6E-24 T 28-03-2018 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 PIRSF PIRSF000804 1 366 5.6E-116 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.4E-43 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.3E-40 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 4.4E-112 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 SUPERFAMILY SSF55979 1 121 1.57E-25 T 28-03-2018 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 SMART SM00480 17 362 6.2E-168 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 7.7E-40 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 SUPERFAMILY SSF55979 245 366 1.29E-36 T 28-03-2018 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 SUPERFAMILY SSF55979 125 244 1.6E-29 T 28-03-2018 CO704_RS24700 9222d71d89b889b1d87eab0e0f3bf48d 366 Gene3D G3DSA:3.10.150.10 1 123 1.2E-27 T 28-03-2018 CO704_RS12505 8677cb4c2014842c68cce3630d9d471d 163 Gene3D G3DSA:2.30.110.20 1 163 1.2E-51 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12505 8677cb4c2014842c68cce3630d9d471d 163 SUPERFAMILY SSF141452 2 160 1.09E-43 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12505 8677cb4c2014842c68cce3630d9d471d 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 9.0E-50 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12505 8677cb4c2014842c68cce3630d9d471d 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 3.2E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS10915 d9d8a2c66feb497a0dad9865b5854ff2 416 PIRSF PIRSF019466 2 403 1.2E-144 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CO704_RS10915 d9d8a2c66feb497a0dad9865b5854ff2 416 Pfam PF04346 Ethanolamine utilisation protein, EutH 4 385 6.5E-114 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CO704_RS14480 3bf719d5d6b2061f95710c58974474aa 180 SUPERFAMILY SSF53474 2 176 2.54E-7 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS14480 3bf719d5d6b2061f95710c58974474aa 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 53.562 T 28-03-2018 IPR022987 Uncharacterised protein family UPF0227 CO704_RS14480 3bf719d5d6b2061f95710c58974474aa 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CO704_RS08575 ab7c3b0a76050c18548932d1e4806a98 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.042 T 28-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CO704_RS08575 ab7c3b0a76050c18548932d1e4806a98 182 PIRSF PIRSF000847 1 178 3.0E-43 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CO704_RS08575 ab7c3b0a76050c18548932d1e4806a98 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CO704_RS08575 ab7c3b0a76050c18548932d1e4806a98 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 4.3E-17 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CO704_RS08575 ab7c3b0a76050c18548932d1e4806a98 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 179 8.8E-61 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CO704_RS07570 68c3b8445fa9fcd2084254ba312395d5 320 Gene3D G3DSA:3.40.50.720 1 128 3.1E-22 T 28-03-2018 CO704_RS07570 68c3b8445fa9fcd2084254ba312395d5 320 SUPERFAMILY SSF51735 3 149 6.0E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07570 68c3b8445fa9fcd2084254ba312395d5 320 Gene3D G3DSA:3.30.360.10 129 320 5.1E-24 T 28-03-2018 CO704_RS07570 68c3b8445fa9fcd2084254ba312395d5 320 SUPERFAMILY SSF55347 123 290 3.05E-22 T 28-03-2018 CO704_RS07570 68c3b8445fa9fcd2084254ba312395d5 320 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 116 2.0E-14 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS12265 db851764f167852d35b26d340352d08e 239 Pfam PF10979 Protein of unknown function (DUF2786) 7 45 1.4E-12 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 CO704_RS12265 db851764f167852d35b26d340352d08e 239 PIRSF PIRSF028111 2 237 2.4E-65 T 28-03-2018 IPR016868 Bacteriophage B3, Orf5 CO704_RS10315 5df2a601209c82480fc902aa96890593 349 Pfam PF08496 Peptidase family S49 N-terminal 2 158 3.2E-59 T 28-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CO704_RS10315 5df2a601209c82480fc902aa96890593 349 SUPERFAMILY SSF52096 97 209 3.54E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS10315 5df2a601209c82480fc902aa96890593 349 SUPERFAMILY SSF52096 240 299 3.54E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS10315 5df2a601209c82480fc902aa96890593 349 Pfam PF01343 Peptidase family S49 161 307 1.2E-45 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CO704_RS10315 5df2a601209c82480fc902aa96890593 349 Gene3D G3DSA:3.90.226.10 16 308 8.8E-32 T 28-03-2018 CO704_RS06970 1566966a28ac178c72c7a944ddeae3c4 371 Pfam PF01497 Periplasmic binding protein 79 314 8.0E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS06970 1566966a28ac178c72c7a944ddeae3c4 371 Gene3D G3DSA:3.40.50.1980 18 160 5.6E-23 T 28-03-2018 CO704_RS06970 1566966a28ac178c72c7a944ddeae3c4 371 SUPERFAMILY SSF53807 27 363 1.6E-54 T 28-03-2018 CO704_RS06970 1566966a28ac178c72c7a944ddeae3c4 371 Gene3D G3DSA:3.40.50.1980 161 346 2.6E-41 T 28-03-2018 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 636 2.1E-265 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 659 67.849 T 28-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 SUPERFAMILY SSF81296 7 143 5.2E-46 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 3.7E-19 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Pfam PF00128 Alpha amylase, catalytic domain 185 289 2.4E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Pfam PF00128 Alpha amylase, catalytic domain 307 362 8.8E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Gene3D G3DSA:3.20.20.80 134 574 7.1E-105 T 28-03-2018 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 SMART SM00642 151 560 2.1E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Gene3D G3DSA:2.60.40.10 1 133 2.8E-41 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 Gene3D G3DSA:2.60.40.1180 575 659 2.4E-8 T 28-03-2018 CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 SUPERFAMILY SSF51445 130 465 2.28E-125 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS00655 a45293f1bb4b30c4398f93b410201d56 660 SUPERFAMILY SSF51445 494 567 2.28E-125 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS05505 37c7a5bb22e016a5b7010c3d61d99159 207 SUPERFAMILY SSF52266 29 204 1.53E-48 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS05505 37c7a5bb22e016a5b7010c3d61d99159 207 Gene3D G3DSA:3.40.50.1110 26 207 1.0E-36 T 28-03-2018 CO704_RS05505 37c7a5bb22e016a5b7010c3d61d99159 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CO704_RS05505 37c7a5bb22e016a5b7010c3d61d99159 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 188 6.9E-23 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 Gene3D G3DSA:3.40.190.10 88 175 3.8E-7 T 28-03-2018 CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 SUPERFAMILY SSF46785 3 85 6.36E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 SUPERFAMILY SSF53850 92 301 3.62E-34 T 28-03-2018 CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 Pfam PF03466 LysR substrate binding domain 92 298 9.0E-33 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 Gene3D G3DSA:3.40.190.10 176 268 4.4E-19 T 28-03-2018 CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06125 4333b5157053966adba06a9b8a788c8a 302 Gene3D G3DSA:1.10.10.10 1 87 4.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11035 fe87a9dec5d9495ad5e61ba7e84b6225 190 SMART SM00862 40 117 1.2E-4 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11035 fe87a9dec5d9495ad5e61ba7e84b6225 190 SUPERFAMILY SSF46894 38 116 9.64E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS11035 fe87a9dec5d9495ad5e61ba7e84b6225 190 Pfam PF00486 Transcriptional regulatory protein, C terminal 41 116 2.0E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11035 fe87a9dec5d9495ad5e61ba7e84b6225 190 Gene3D G3DSA:1.10.10.10 14 122 6.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18595 637b0c589efe5c4379a3608ba796356b 316 SUPERFAMILY SSF161098 97 295 8.9E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18595 637b0c589efe5c4379a3608ba796356b 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 312 3.3E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18595 637b0c589efe5c4379a3608ba796356b 316 Gene3D G3DSA:1.10.3720.10 40 313 2.2E-45 T 28-03-2018 CO704_RS18595 637b0c589efe5c4379a3608ba796356b 316 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 9.4E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 Gene3D G3DSA:3.20.20.60 1 418 8.2E-157 T 28-03-2018 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 SUPERFAMILY SSF51621 6 418 2.06E-157 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 2.6E-91 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 3.8E-118 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 Pfam PF00463 Isocitrate lyase family 9 256 1.1E-61 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 Pfam PF00463 Isocitrate lyase family 257 435 1.5E-51 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CO704_RS22800 f37c6f013a4c22a63cc57621dde15f4a 435 PIRSF PIRSF001362 1 435 5.0E-230 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CO704_RS17945 a31d4dafa0ab506a7d987f12fa80991f 439 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 53 427 2.6E-126 T 28-03-2018 IPR013397 CRISPR-associated protein Csy1 CO704_RS17945 a31d4dafa0ab506a7d987f12fa80991f 439 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 54 416 1.5E-123 T 28-03-2018 IPR013397 CRISPR-associated protein Csy1 CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 304 523 1.7E-39 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 SMART SM00939 292 526 5.5E-57 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 24 275 7.0E-65 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 Gene3D G3DSA:3.40.50.1820 2 336 2.9E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 SUPERFAMILY SSF53474 7 324 2.53E-75 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 SUPERFAMILY SSF49785 332 530 8.71E-44 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 Gene3D G3DSA:2.60.120.260 337 530 3.0E-38 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS19990 0ca4098adc981f4d00ec893d718e1989 673 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 23 505 2.6E-67 T 28-03-2018 IPR005674 CocE/Serine esterase GO:0016787 CO704_RS10455 0e9cb3223fb810b43d42507dca4745e3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 5.4E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS10455 0e9cb3223fb810b43d42507dca4745e3 321 Gene3D G3DSA:1.10.3720.10 3 303 6.1E-42 T 28-03-2018 CO704_RS10455 0e9cb3223fb810b43d42507dca4745e3 321 SUPERFAMILY SSF161098 69 138 3.01E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS10455 0e9cb3223fb810b43d42507dca4745e3 321 SUPERFAMILY SSF161098 178 300 3.01E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20970 2a8a1f5635f5445daee008b99278475b 103 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CO704_RS20970 2a8a1f5635f5445daee008b99278475b 103 SUPERFAMILY SSF50182 7 69 4.24E-24 T 28-03-2018 IPR010920 LSM domain CO704_RS20970 2a8a1f5635f5445daee008b99278475b 103 Gene3D G3DSA:2.30.30.100 4 73 1.1E-33 T 28-03-2018 CO704_RS20970 2a8a1f5635f5445daee008b99278475b 103 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CO704_RS20970 2a8a1f5635f5445daee008b99278475b 103 Pfam PF17209 Hfq protein 7 69 5.0E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 Pfam PF00005 ABC transporter 34 184 2.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 SUPERFAMILY SSF52540 6 256 4.35E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.5E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 1.1E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 SMART SM00382 42 242 7.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 Gene3D G3DSA:3.40.50.300 3 321 2.4E-82 T 28-03-2018 CO704_RS18605 f33f5b3b954ba5e46a87fa3e98244cdf 321 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Pfam PF00308 Bacterial dnaA protein 126 342 1.1E-99 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 437 1.0E-32 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 SMART SM00760 368 437 6.1E-45 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Gene3D G3DSA:3.40.50.300 122 289 3.7E-22 T 28-03-2018 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Gene3D G3DSA:1.10.8.60 291 362 6.9E-28 T 28-03-2018 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 459 34.529 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 SUPERFAMILY SSF48295 356 459 3.4E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 SUPERFAMILY SSF52540 126 336 1.99E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 458 3.2E-187 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Gene3D G3DSA:1.10.1750.10 363 459 1.5E-36 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 28-03-2018 IPR024633 DnaA N-terminal domain CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 190 204 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 158 178 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 222 236 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 418 437 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 256 283 1.2E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 ProSitePatterns PS01008 DnaA protein signature. 418 437 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CO704_RS24695 3326f3028ae87a468c0fdb41186728b6 460 SMART SM00382 157 359 4.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS14760 420df2f52352b8f8089a27716bf34e0f 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 6.2E-106 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS14760 420df2f52352b8f8089a27716bf34e0f 307 PIRSF PIRSF026649 2 306 2.6E-101 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS14760 420df2f52352b8f8089a27716bf34e0f 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 2.2E-141 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CO704_RS14760 420df2f52352b8f8089a27716bf34e0f 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.143 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CO704_RS19350 3eab3edca5552bf16b904975de6fd3f4 266 Gene3D G3DSA:3.40.50.1980 142 266 2.2E-21 T 28-03-2018 CO704_RS19350 3eab3edca5552bf16b904975de6fd3f4 266 Gene3D G3DSA:3.40.50.1980 23 141 1.6E-25 T 28-03-2018 CO704_RS19350 3eab3edca5552bf16b904975de6fd3f4 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 3 266 44.162 T 28-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 CO704_RS19350 3eab3edca5552bf16b904975de6fd3f4 266 SUPERFAMILY SSF53807 26 263 2.28E-53 T 28-03-2018 CO704_RS19350 3eab3edca5552bf16b904975de6fd3f4 266 Pfam PF01497 Periplasmic binding protein 27 228 1.4E-21 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 613 34.723 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 34 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS23485 4334e83f1941064cbd01592db7843343 613 SUPERFAMILY SSF56935 29 613 9.42E-111 T 28-03-2018 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 Pfam PF00593 TonB dependent receptor 238 612 1.4E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 613 1.3E-201 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 596 613 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS23485 4334e83f1941064cbd01592db7843343 613 Gene3D G3DSA:2.170.130.10 17 152 1.8E-34 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 Gene3D G3DSA:2.40.170.20 153 613 7.5E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS23485 4334e83f1941064cbd01592db7843343 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 147 7.0E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS19385 3a1211b336de541462729bbde2d00933 265 SMART SM00382 36 224 5.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19385 3a1211b336de541462729bbde2d00933 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS19385 3a1211b336de541462729bbde2d00933 265 SUPERFAMILY SSF52540 12 239 4.22E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19385 3a1211b336de541462729bbde2d00933 265 Gene3D G3DSA:3.40.50.300 1 245 4.8E-60 T 28-03-2018 CO704_RS19385 3a1211b336de541462729bbde2d00933 265 Pfam PF00005 ABC transporter 27 176 1.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS20130 2f846fc6011df51c161a8f5b0157c209 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.2E-13 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CO704_RS20130 2f846fc6011df51c161a8f5b0157c209 53 PIRSF PIRSF036466 1 53 1.0E-20 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CO704_RS20130 2f846fc6011df51c161a8f5b0157c209 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 19.33 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CO704_RS03485 417130e0d760a7d29d88a2a27e0270db 429 Pfam PF03222 Tryptophan/tyrosine permease family 30 390 4.3E-10 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CO704_RS03485 417130e0d760a7d29d88a2a27e0270db 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 4.9E-181 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS24850 ff0be8a78b1c70e6461affd04098aef1 394 Pfam PF07690 Major Facilitator Superfamily 14 349 4.3E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24850 ff0be8a78b1c70e6461affd04098aef1 394 Gene3D G3DSA:1.20.1250.20 197 391 2.4E-5 T 28-03-2018 CO704_RS24850 ff0be8a78b1c70e6461affd04098aef1 394 SUPERFAMILY SSF103473 7 384 4.45E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24850 ff0be8a78b1c70e6461affd04098aef1 394 Gene3D G3DSA:1.20.1250.20 1 193 4.6E-33 T 28-03-2018 CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 Gene3D G3DSA:1.10.10.10 120 225 4.4E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 SUPERFAMILY SSF52172 3 176 2.78E-37 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 SMART SM00862 147 223 4.7E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 6.5E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 SMART SM00448 2 112 2.0E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS16765 004608e3c7d9c5047d0165e323dec1c8 225 Gene3D G3DSA:3.40.50.2300 1 119 6.4E-32 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 SUPERFAMILY SSF69279 15 192 2.0E-46 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Gene3D G3DSA:4.10.180.10 297 312 5.5E-6 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 SUPERFAMILY SSF69255 383 473 4.71E-26 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 SUPERFAMILY SSF69279 204 381 4.76E-42 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 515 6.3E-71 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 517 5.5E-140 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Gene3D G3DSA:2.40.50.230 389 473 8.5E-22 T 28-03-2018 IPR006531 Gp5 N-terminal CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 612 757 5.5E-47 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 491 594 1.9E-34 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Gene3D G3DSA:1.20.5.340 555 699 6.1E-4 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Gene3D G3DSA:3.55.50.10 111 207 1.7E-26 T 28-03-2018 CO704_RS12490 2d7b7acf71b41026c50718eb9dadc406 790 Pfam PF05954 Phage late control gene D protein (GPD) 34 356 3.5E-61 T 28-03-2018 CO704_RS22900 b936f7b6baf63a71fb2d67abb666bed8 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.2E-20 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis CO704_RS22900 b936f7b6baf63a71fb2d67abb666bed8 66 SUPERFAMILY SSF54285 1 66 1.13E-17 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CO704_RS22900 b936f7b6baf63a71fb2d67abb666bed8 66 Pfam PF02597 ThiS family 3 66 4.6E-16 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CO704_RS22900 b936f7b6baf63a71fb2d67abb666bed8 66 Gene3D G3DSA:3.10.20.30 1 66 1.0E-21 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.7E-77 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 SUPERFAMILY SSF51412 6 335 1.03E-99 T 28-03-2018 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.0E-201 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 Gene3D G3DSA:3.20.20.70 8 341 1.1E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 SMART SM01240 7 344 1.3E-136 T 28-03-2018 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 PIRSF PIRSF000235 1 347 5.6E-197 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CO704_RS19570 65996486c1d6fa7b6ad188db9ba99acb 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.468 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 Pfam PF00581 Rhodanese-like domain 10 128 3.0E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 Pfam PF00581 Rhodanese-like domain 166 270 1.2E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 SMART SM00450 7 132 1.1E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 SMART SM00450 155 275 5.3E-22 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 SUPERFAMILY SSF52821 2 150 3.01E-41 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 SUPERFAMILY SSF52821 165 278 2.49E-33 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 Gene3D G3DSA:3.40.250.10 1 154 3.5E-33 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS04955 211d2ee6fb2ccdc47bb2da55093bbcbe 281 Gene3D G3DSA:3.40.250.10 157 281 1.2E-26 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 Gene3D G3DSA:3.40.50.1000 1 188 6.6E-24 T 28-03-2018 IPR023214 HAD-like domain CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 1.5E-9 T 28-03-2018 IPR023214 HAD-like domain CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 SUPERFAMILY SSF56784 22 181 2.89E-39 T 28-03-2018 IPR023214 HAD-like domain CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 142 8.7E-13 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 PIRSF PIRSF006118 13 188 2.5E-74 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS01650 6fc4ad3fa4d2598871f1ac22609bb613 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 1.5E-72 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 1.5E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 1.5E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 1.5E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 Gene3D G3DSA:2.60.410.10 311 382 4.6E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 SUPERFAMILY SSF69189 292 385 2.35E-23 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 SMART SM00936 292 383 1.5E-31 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 SUPERFAMILY SSF56601 14 292 4.23E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 382 7.6E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 5.4E-99 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CO704_RS17260 d115ce2eea89a8dae0cabdbb06f3e02f 403 Gene3D G3DSA:3.40.710.10 12 310 2.1E-46 T 28-03-2018 CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 SUPERFAMILY SSF55804 2 140 1.44E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 1.6E-21 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 139 1.3E-27 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 Pfam PF00381 PTS HPr component phosphorylation site 287 369 6.1E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 SUPERFAMILY SSF55594 287 375 1.3E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 SUPERFAMILY SSF55804 149 276 4.01E-14 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 Gene3D G3DSA:3.30.1340.10 282 369 1.7E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 Gene3D G3DSA:3.40.930.10 144 277 1.7E-5 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 Gene3D G3DSA:3.40.930.10 3 143 1.8E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 7.6E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 7.6E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS06915 79f3a44c9e8b2f6e105d49443aae2ac2 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 7.6E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 Pfam PF09160 FimH, mannose binding 29 167 1.6E-45 T 28-03-2018 IPR015243 FimH, mannose-binding domain CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 Pfam PF00419 Fimbrial protein 175 301 3.9E-8 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 Gene3D G3DSA:2.60.40.1090 179 301 4.2E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 SUPERFAMILY SSF49401 180 301 3.23E-23 T 28-03-2018 IPR008966 Adhesion domain CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 SUPERFAMILY SSF49401 33 178 2.48E-39 T 28-03-2018 IPR008966 Adhesion domain CO704_RS18730 86670790b7e272c8f3125b671d29ceac 301 Gene3D G3DSA:2.60.40.1090 23 178 2.9E-50 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 4.0E-23 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 94 1.7E-4 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 SUPERFAMILY SSF63380 3 97 1.34E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 Gene3D G3DSA:2.40.30.10 2 98 6.6E-17 T 28-03-2018 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 Gene3D G3DSA:3.40.50.80 99 233 1.8E-23 T 28-03-2018 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 SUPERFAMILY SSF52343 100 231 3.27E-35 T 28-03-2018 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 8.6E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 8.6E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 8.6E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 8.6E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS23075 5d66e8f64e26bc8f1a8824fc8f4785f0 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 8.6E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 SUPERFAMILY SSF46785 2 80 1.63E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18770 211924b57cc35027b04f3513c7608565 292 Gene3D G3DSA:1.10.10.10 1 83 3.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18770 211924b57cc35027b04f3513c7608565 292 SUPERFAMILY SSF53850 83 288 1.47E-30 T 28-03-2018 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 1.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 Gene3D G3DSA:3.40.190.10 84 172 6.9E-20 T 28-03-2018 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 Gene3D G3DSA:3.40.190.10 173 261 2.1E-11 T 28-03-2018 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 2.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18770 211924b57cc35027b04f3513c7608565 292 Pfam PF03466 LysR substrate binding domain 82 286 2.2E-33 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 Gene3D G3DSA:3.40.718.10 1 362 6.1E-132 T 28-03-2018 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 SMART SM01329 6 355 2.7E-204 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 5.0E-170 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.642 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.7E-137 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CO704_RS19715 ee32d61d147f32101192b7d6cf11eeaa 363 SUPERFAMILY SSF53659 2 360 8.46E-124 T 28-03-2018 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 523 2.4E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 259 7.5E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 SUPERFAMILY SSF161098 11 265 9.35E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 2.3E-260 T 28-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 SUPERFAMILY SSF161098 287 527 6.67E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 Gene3D G3DSA:1.10.3720.10 9 269 5.0E-28 T 28-03-2018 CO704_RS19750 ec46d2b42af61cc1b24c86f4ba17d06c 536 Gene3D G3DSA:1.10.3720.10 322 532 3.4E-24 T 28-03-2018 CO704_RS07775 4e7700e84555a2e35421327b60bb032f 124 Gene3D G3DSA:3.10.450.50 4 122 6.4E-32 T 28-03-2018 CO704_RS07775 4e7700e84555a2e35421327b60bb032f 124 PIRSF PIRSF029394 1 124 2.1E-40 T 28-03-2018 IPR016918 Uncharacterised conserved protein UCP029394 CO704_RS07775 4e7700e84555a2e35421327b60bb032f 124 SUPERFAMILY SSF54427 3 121 7.6E-35 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 Gene3D G3DSA:3.40.50.2300 173 304 1.8E-20 T 28-03-2018 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 Gene3D G3DSA:3.40.50.2300 58 172 2.4E-15 T 28-03-2018 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 SUPERFAMILY SSF47413 4 60 8.13E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 2.8E-163 T 28-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 SUPERFAMILY SSF53822 63 314 1.26E-58 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 Gene3D G3DSA:1.10.260.40 5 57 1.7E-20 T 28-03-2018 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 Pfam PF13377 Periplasmic binding protein-like domain 169 312 9.7E-18 T 28-03-2018 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 28-03-2018 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.7E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS01935 1798b8538b0f8ba747432521225f0fcb 315 SMART SM00354 4 74 4.5E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 SUPERFAMILY SSF53067 85 204 5.7E-25 T 28-03-2018 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 SUPERFAMILY SSF53067 1 44 5.7E-25 T 28-03-2018 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 Gene3D G3DSA:3.30.420.40 1 216 2.1E-33 T 28-03-2018 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 Gene3D G3DSA:3.30.420.40 217 429 4.4E-29 T 28-03-2018 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 Pfam PF00012 Hsp70 protein 130 228 1.2E-8 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 Pfam PF00012 Hsp70 protein 331 423 4.0E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 SUPERFAMILY SSF53067 208 276 8.25E-30 T 28-03-2018 CO704_RS07400 772eee27944ee10956f211117331c2bc 450 SUPERFAMILY SSF53067 328 447 8.25E-30 T 28-03-2018 CO704_RS08020 c79b5550f7b76cec4d0e8e06a40d03e5 319 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 7.9E-40 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 CO704_RS08020 c79b5550f7b76cec4d0e8e06a40d03e5 319 Pfam PF04463 Protein of unknown function (DUF523) 7 149 2.5E-35 T 28-03-2018 IPR007553 Domain of unknown function DUF523 CO704_RS08020 c79b5550f7b76cec4d0e8e06a40d03e5 319 PIRSF PIRSF037004 1 318 2.3E-130 T 28-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CO704_RS11390 57a5bb4d02bc468240a997f2cf987d59 395 Gene3D G3DSA:1.20.1600.10 45 367 1.6E-31 T 28-03-2018 CO704_RS11390 57a5bb4d02bc468240a997f2cf987d59 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 382 2.3E-46 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS11390 57a5bb4d02bc468240a997f2cf987d59 395 SUPERFAMILY SSF111369 53 245 2.35E-23 T 28-03-2018 CO704_RS11390 57a5bb4d02bc468240a997f2cf987d59 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 263 4.2E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS05140 ea37725a91cf9d12d646d8526f332b34 57 Pfam PF11119 Protein of unknown function (DUF2633) 3 56 1.0E-28 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 CO704_RS05140 ea37725a91cf9d12d646d8526f332b34 57 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 56 3.0E-5 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 Pfam PF07690 Major Facilitator Superfamily 10 388 4.4E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 Gene3D G3DSA:1.20.1250.20 252 491 2.1E-16 T 28-03-2018 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 SUPERFAMILY SSF103473 241 410 1.44E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS05530 bffa461abeba08e117f269898c595d71 492 SUPERFAMILY SSF103473 452 476 1.44E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS05530 bffa461abeba08e117f269898c595d71 492 SUPERFAMILY SSF103473 4 190 1.44E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS05530 bffa461abeba08e117f269898c595d71 492 PRINTS PR01035 Tetracycline resistance protein signature 19 35 4.2E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 PRINTS PR01035 Tetracycline resistance protein signature 132 154 4.2E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS05530 bffa461abeba08e117f269898c595d71 492 Gene3D G3DSA:1.20.1250.20 3 193 3.4E-34 T 28-03-2018 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 Gene3D G3DSA:3.30.360.10 144 314 7.1E-41 T 28-03-2018 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 2.9E-23 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 Gene3D G3DSA:3.40.50.720 1 143 1.0E-26 T 28-03-2018 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 SUPERFAMILY SSF55347 132 319 6.24E-48 T 28-03-2018 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 1.0E-35 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 PIRSF PIRSF000148 4 337 1.2E-93 T 28-03-2018 CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 SUPERFAMILY SSF51735 5 157 2.59E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06340 2fe6344af84500b0d9de87836c7fd149 337 SMART SM00859 6 121 2.0E-29 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CO704_RS19870 c79f87817efd961652d7cdea406216a9 156 SUPERFAMILY SSF54534 5 143 8.05E-37 T 28-03-2018 CO704_RS19870 c79f87817efd961652d7cdea406216a9 156 Gene3D G3DSA:3.10.50.40 2 152 3.7E-20 T 28-03-2018 CO704_RS19870 c79f87817efd961652d7cdea406216a9 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.1E-15 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 4.5E-39 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 Gene3D G3DSA:1.10.287.990 20 90 1.3E-31 T 28-03-2018 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 4.3E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.3E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 4.3E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.3E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 4.3E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 SUPERFAMILY SSF54719 94 204 2.49E-44 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 SUPERFAMILY SSF46609 1 90 1.22E-37 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 6.2E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 PIRSF PIRSF000349 1 206 5.6E-80 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS24185 0decfdefccd782015f764104f5c10d75 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CO704_RS15835 76cbcbdd877cc34d8c549265b68198f3 309 Gene3D G3DSA:3.20.20.70 7 178 3.7E-5 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS15835 76cbcbdd877cc34d8c549265b68198f3 309 Gene3D G3DSA:3.20.20.70 179 298 0.28 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-31 T 28-03-2018 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 Gene3D G3DSA:1.10.10.10 130 238 1.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 SUPERFAMILY SSF52172 2 127 2.56E-36 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 SMART SM00862 156 232 3.7E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 Pfam PF00072 Response regulator receiver domain 6 113 1.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 SUPERFAMILY SSF46894 136 234 6.24E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS19985 5a6213f41e190f7f46badc90c854911a 238 SMART SM00448 4 114 9.5E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 SUPERFAMILY SSF53671 2 332 6.68E-97 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 5.6E-46 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.6E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.6E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.6E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.6E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.6E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.7E-134 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 Gene3D G3DSA:3.40.50.1370 147 319 1.5E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.2E-55 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.466 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CO704_RS01990 82f53c802ece19093131cce20864a40c 334 Gene3D G3DSA:3.40.50.1370 1 146 1.1E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS16940 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 170 237 1.7E-15 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS16940 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 8 157 2.5E-57 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS16940 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 240 304 7.9E-24 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS10090 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 170 237 1.7E-15 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS10090 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 8 157 2.5E-57 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS10090 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 240 304 7.9E-24 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS12365 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 170 237 1.7E-15 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS12365 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 8 157 2.5E-57 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS12365 1e6ca7adca1e8f18528300c18e5768e7 307 Pfam PF10124 Mu-like prophage major head subunit gpT 240 304 7.9E-24 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 Gene3D G3DSA:3.40.50.2300 59 179 7.1E-21 T 28-03-2018 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.9E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 SUPERFAMILY SSF53822 65 333 1.16E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 SUPERFAMILY SSF47413 5 60 9.29E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 SMART SM00354 5 75 3.4E-30 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 Gene3D G3DSA:1.10.260.40 6 58 5.8E-21 T 28-03-2018 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 Pfam PF13377 Periplasmic binding protein-like domain 173 330 1.2E-36 T 28-03-2018 CO704_RS11340 5dc112e000ddeb34bb10d87d143aa6a8 359 Gene3D G3DSA:3.40.50.2300 180 304 2.1E-45 T 28-03-2018 CO704_RS18075 eaaaa45dbc0e978e17ff78840733237a 254 SUPERFAMILY SSF53067 3 246 2.33E-32 T 28-03-2018 CO704_RS18075 eaaaa45dbc0e978e17ff78840733237a 254 Gene3D G3DSA:3.30.420.40 1 84 0.0027 T 28-03-2018 CO704_RS18075 eaaaa45dbc0e978e17ff78840733237a 254 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 248 4.4E-64 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CO704_RS18075 eaaaa45dbc0e978e17ff78840733237a 254 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 3.5E-97 T 28-03-2018 IPR008275 CoA enzyme activase CO704_RS18075 eaaaa45dbc0e978e17ff78840733237a 254 Gene3D G3DSA:3.30.420.40 92 233 1.6E-34 T 28-03-2018 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 Pfam PF02203 Tar ligand binding domain homologue 3 165 5.0E-14 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 SMART SM00304 212 264 1.7E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 480 9.8E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 Gene3D G3DSA:1.10.287.950 320 516 2.6E-47 T 28-03-2018 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 Gene3D G3DSA:1.10.287.950 66 319 1.4E-21 T 28-03-2018 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 3.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 3.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 3.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 SUPERFAMILY SSF58104 232 517 1.31E-71 T 28-03-2018 CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS07900 44339306cdc3b6459adb0c5ab95f5c45 545 SMART SM00283 265 512 7.8E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS04160 a2e372046b26707cb2f3140bc4ea64d8 378 SUPERFAMILY SSF69572 94 377 7.72E-39 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS04160 a2e372046b26707cb2f3140bc4ea64d8 378 Gene3D G3DSA:3.40.50.720 90 378 3.2E-38 T 28-03-2018 CO704_RS04160 a2e372046b26707cb2f3140bc4ea64d8 378 Pfam PF00899 ThiF family 100 353 7.9E-27 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 Gene3D G3DSA:3.40.50.1820 2 292 3.8E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 4.1E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 4.1E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 235 249 4.1E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 SUPERFAMILY SSF53474 9 291 1.28E-56 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17855 efcee9e560fef16b0a5c813299b2cbcc 292 Pfam PF12146 Serine aminopeptidase, S33 21 273 5.7E-17 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CO704_RS17905 ada004dd4ab7b899056e5d9566a5cc4b 276 SUPERFAMILY SSF51658 27 221 7.65E-10 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS17905 ada004dd4ab7b899056e5d9566a5cc4b 276 Pfam PF05114 Protein of unknown function (DUF692) 6 269 5.1E-96 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 CO704_RS17905 ada004dd4ab7b899056e5d9566a5cc4b 276 Gene3D G3DSA:3.20.20.150 2 276 3.8E-75 T 28-03-2018 CO704_RS22710 682eec69abd73eb8b2d19a60adb69ef1 135 Pfam PF06146 Phosphate-starvation-inducible E 61 122 7.3E-17 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CO704_RS22710 682eec69abd73eb8b2d19a60adb69ef1 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 24.785 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CO704_RS22710 682eec69abd73eb8b2d19a60adb69ef1 135 PIRSF PIRSF029598 1 135 2.3E-48 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 8.2E-186 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 Gene3D G3DSA:3.30.930.10 1 325 2.0E-37 T 28-03-2018 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 PIRSF PIRSF001555 1 330 2.0E-148 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 44.919 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 6.4E-93 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CO704_RS24075 c32905de6b405340aa10c9a6f087893c 330 SUPERFAMILY SSF55681 8 327 7.46E-94 T 28-03-2018 CO704_RS23435 dbe68589115628368de769d7787b282b 506 SUPERFAMILY SSF54211 10 169 2.5E-29 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS23435 dbe68589115628368de769d7787b282b 506 SMART SM00382 209 389 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS23435 dbe68589115628368de769d7787b282b 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 389 1.0E-89 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain CO704_RS23435 dbe68589115628368de769d7787b282b 506 Gene3D G3DSA:3.30.230.10 2 189 4.1E-36 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS23435 dbe68589115628368de769d7787b282b 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.0E-43 T 28-03-2018 CO704_RS23435 dbe68589115628368de769d7787b282b 506 Gene3D G3DSA:3.40.50.300 190 453 5.9E-24 T 28-03-2018 CO704_RS23435 dbe68589115628368de769d7787b282b 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 5.0E-25 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CO704_RS23435 dbe68589115628368de769d7787b282b 506 SUPERFAMILY SSF52540 189 503 4.74E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23435 dbe68589115628368de769d7787b282b 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 5.9E-220 T 28-03-2018 IPR004482 Mg chelatase-related protein CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Pfam PF07503 HypF finger 103 136 8.0E-18 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Pfam PF07503 HypF finger 153 185 4.9E-15 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 SUPERFAMILY SSF55821 170 374 1.16E-43 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Gene3D G3DSA:3.30.70.100 2 92 2.0E-18 T 28-03-2018 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 733 6.0E-266 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Gene3D G3DSA:3.30.420.40 560 710 6.3E-24 T 28-03-2018 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 SUPERFAMILY SSF54975 5 86 8.5E-20 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Pfam PF00708 Acylphosphatase 5 85 4.2E-14 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Gene3D G3DSA:3.90.870.10 185 376 2.0E-46 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 Pfam PF01300 Telomere recombination 205 368 1.1E-43 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CO704_RS24295 1639ee31b307a29e1d8f32884c2e1ac4 752 PIRSF PIRSF006256 1 743 2.7E-258 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CO704_RS08600 8dc509a13043dfb5ea7395298a0d4256 291 Gene3D G3DSA:1.10.3680.10 148 182 0.16 T 28-03-2018 IPR029024 TerB-like CO704_RS08600 8dc509a13043dfb5ea7395298a0d4256 291 Gene3D G3DSA:1.10.3680.10 11 139 0.0014 T 28-03-2018 IPR029024 TerB-like CO704_RS08600 8dc509a13043dfb5ea7395298a0d4256 291 SUPERFAMILY SSF52113 203 286 3.71E-6 T 28-03-2018 IPR001357 BRCT domain CO704_RS08600 8dc509a13043dfb5ea7395298a0d4256 291 Gene3D G3DSA:3.40.50.10190 193 290 1.7E-5 T 28-03-2018 IPR001357 BRCT domain CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 Gene3D G3DSA:3.40.190.10 178 259 2.3E-17 T 28-03-2018 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 Gene3D G3DSA:1.10.10.10 1 90 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 SUPERFAMILY SSF53850 92 290 9.62E-36 T 28-03-2018 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 Pfam PF03466 LysR substrate binding domain 91 289 8.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 Gene3D G3DSA:3.40.190.10 94 177 1.6E-14 T 28-03-2018 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21340 0f186585b47f0c56265b05ceab0ac164 291 SUPERFAMILY SSF46785 2 87 2.32E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 181 1.2E-20 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 PIRSF PIRSF000398 1 256 3.3E-48 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 SUPERFAMILY SSF53335 1 255 1.33E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS10175 1dea2039d84643e232e92b8b2eef72b4 256 Gene3D G3DSA:3.40.50.150 1 256 1.5E-38 T 28-03-2018 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.6E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 Gene3D G3DSA:3.30.70.60 1 100 5.8E-30 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 Pfam PF01250 Ribosomal protein S6 3 91 3.4E-27 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.693 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS20860 6fa2428d15728ac554a3ff21f5aebec6 131 SUPERFAMILY SSF54995 1 103 2.62E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.019 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 Gene3D G3DSA:3.30.63.10 48 83 3.2E-27 T 28-03-2018 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 Pfam PF00625 Guanylate kinase 5 185 4.8E-68 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 4.7E-76 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 SUPERFAMILY SSF52540 3 189 1.49E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 SMART SM00072 3 187 9.8E-84 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 Gene3D G3DSA:3.40.50.300 3 47 8.2E-4 T 28-03-2018 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CO704_RS23865 609cccc3b208a5493cc091485f8d4b71 207 Gene3D G3DSA:3.40.50.300 84 187 3.7E-35 T 28-03-2018 CO704_RS15905 392fb38bc765591d16702aaca8905edd 129 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 3 113 1.0E-23 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CO704_RS15905 392fb38bc765591d16702aaca8905edd 129 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 5 115 4.2E-39 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CO704_RS02000 a5d010be981ef20831c570735d21cc27 253 Gene3D G3DSA:1.20.1260.10 3 253 9.1E-70 T 28-03-2018 IPR012347 Ferritin-related CO704_RS02000 a5d010be981ef20831c570735d21cc27 253 PIRSF PIRSF020736 1 253 8.7E-89 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CO704_RS02000 a5d010be981ef20831c570735d21cc27 253 SUPERFAMILY SSF47240 7 57 3.61E-71 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS02000 a5d010be981ef20831c570735d21cc27 253 SUPERFAMILY SSF47240 105 251 3.61E-71 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS02000 a5d010be981ef20831c570735d21cc27 253 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 1.6E-112 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CO704_RS23120 f518e65b59b17dbff9ff1d15c7175414 201 Gene3D G3DSA:3.30.1050.10 22 125 4.7E-4 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS23120 f518e65b59b17dbff9ff1d15c7175414 201 SUPERFAMILY SSF55718 14 116 5.3E-6 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS23120 f518e65b59b17dbff9ff1d15c7175414 201 Pfam PF02036 SCP-2 sterol transfer family 15 113 2.5E-20 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS11290 c77316db31ee6ff4619e70bd7dfe038f 164 Gene3D G3DSA:3.40.50.300 8 150 8.3E-16 T 28-03-2018 CO704_RS11290 c77316db31ee6ff4619e70bd7dfe038f 164 Pfam PF13671 AAA domain 10 150 6.8E-25 T 28-03-2018 CO704_RS11290 c77316db31ee6ff4619e70bd7dfe038f 164 SUPERFAMILY SSF52540 5 142 2.43E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 SUPERFAMILY SSF117143 92 222 2.88E-36 T 28-03-2018 CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.9E-44 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 9.9E-35 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 Pfam PF00460 Flagella basal body rod protein 5 35 2.4E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 2.5E-26 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS17460 f3b1262a121b53ba6d27eb9c5ecc3eac 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.6E-111 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 Gene3D G3DSA:1.10.10.60 149 202 9.8E-10 T 28-03-2018 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 SUPERFAMILY SSF51182 12 171 6.67E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 Gene3D G3DSA:1.10.10.60 203 251 5.3E-12 T 28-03-2018 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 Pfam PF12833 Helix-turn-helix domain 176 250 9.1E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 Gene3D G3DSA:2.60.120.10 4 96 1.1E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 Pfam PF02311 AraC-like ligand binding domain 26 113 3.3E-8 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 SMART SM00342 169 251 2.3E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 SUPERFAMILY SSF46689 206 250 5.38E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 SUPERFAMILY SSF46689 155 203 3.33E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03910 3b8894c5b7bb5f57834ffad0b6fc65a6 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS22560 f94bd6d9377035773b40a7ac50abc82d 490 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 67 416 5.2E-62 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CO704_RS22560 f94bd6d9377035773b40a7ac50abc82d 490 Gene3D G3DSA:3.40.640.10 92 370 2.4E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS22560 f94bd6d9377035773b40a7ac50abc82d 490 Gene3D G3DSA:3.90.1150.10 371 488 1.8E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22560 f94bd6d9377035773b40a7ac50abc82d 490 Gene3D G3DSA:1.20.1650.10 4 80 7.8E-15 T 28-03-2018 CO704_RS22560 f94bd6d9377035773b40a7ac50abc82d 490 SUPERFAMILY SSF53383 14 486 3.66E-118 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 SUPERFAMILY SSF46689 190 240 9.21E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 177 1.4E-39 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 SMART SM00342 206 289 2.3E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 Gene3D G3DSA:1.10.10.60 143 246 2.0E-14 T 28-03-2018 CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 Gene3D G3DSA:1.10.10.60 247 294 1.3E-13 T 28-03-2018 CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 SUPERFAMILY SSF46689 242 292 3.67E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS02550 52c5e5165f550224114bbf5f76741f49 295 Pfam PF12833 Helix-turn-helix domain 212 287 7.6E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Pfam PF03471 Transporter associated domain 493 570 1.5E-11 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.6 T 28-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 3.7E-57 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Gene3D G3DSA:3.30.70.1450 415 487 2.5E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 SUPERFAMILY SSF56176 497 570 2.24E-10 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Pfam PF02080 TrkA-C domain 421 483 3.0E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 Gene3D G3DSA:3.30.465.10 490 570 1.6E-9 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 SUPERFAMILY SSF116726 412 483 1.01E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS09285 50396de2a6d056b0284010a58016ce0a 576 SMART SM01091 492 572 2.4E-16 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 SMART SM00345 7 66 9.4E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 SUPERFAMILY SSF46785 4 85 1.11E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 Pfam PF07702 UTRA domain 88 212 1.0E-23 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 Gene3D G3DSA:1.10.10.10 2 68 1.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 64 1.2E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 SUPERFAMILY SSF64288 90 227 1.05E-30 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 SMART SM00866 83 221 1.3E-13 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.4E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.4E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS05270 fc6fab55faa112e1fe77c9194bd58892 237 Gene3D G3DSA:3.40.1410.10 77 228 2.1E-24 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS09300 f9fdb141902be3f4b9addb0233414bc7 243 Pfam PF07238 PilZ domain 112 229 7.1E-10 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CO704_RS09300 f9fdb141902be3f4b9addb0233414bc7 243 Gene3D G3DSA:2.40.10.220 111 243 8.0E-16 T 28-03-2018 CO704_RS09300 f9fdb141902be3f4b9addb0233414bc7 243 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 29.608 T 28-03-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 CO704_RS09300 f9fdb141902be3f4b9addb0233414bc7 243 Gene3D G3DSA:2.30.110.10 9 110 1.1E-25 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS09300 f9fdb141902be3f4b9addb0233414bc7 243 Pfam PF07317 Flagellar regulator YcgR 8 109 1.3E-28 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 SUPERFAMILY SSF46785 5 90 4.31E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 SUPERFAMILY SSF53850 92 295 1.05E-39 T 28-03-2018 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 Pfam PF03466 LysR substrate binding domain 90 294 4.1E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 Gene3D G3DSA:3.40.190.10 178 267 2.0E-26 T 28-03-2018 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 Gene3D G3DSA:3.40.190.10 89 177 2.8E-14 T 28-03-2018 CO704_RS17970 21d4683b9b80f1fbc526e8e4dc0174fd 302 Gene3D G3DSA:1.10.10.10 3 88 8.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21435 9abbc88b6d5daaf8ac2cfcaa323d249e 329 SUPERFAMILY SSF56349 13 314 3.24E-40 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS21435 9abbc88b6d5daaf8ac2cfcaa323d249e 329 Pfam PF00589 Phage integrase family 154 312 1.5E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS21435 9abbc88b6d5daaf8ac2cfcaa323d249e 329 Gene3D G3DSA:1.10.443.10 116 318 1.6E-25 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS21435 9abbc88b6d5daaf8ac2cfcaa323d249e 329 Gene3D G3DSA:1.10.150.130 1 113 5.6E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS21435 9abbc88b6d5daaf8ac2cfcaa323d249e 329 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 23 93 1.4E-6 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CO704_RS16080 a2b8376734bc72e3724290892c150dfb 391 SUPERFAMILY SSF140591 104 280 3.53E-31 T 28-03-2018 CO704_RS16080 a2b8376734bc72e3724290892c150dfb 391 Gene3D G3DSA:1.10.600.10 66 282 2.1E-4 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS16080 a2b8376734bc72e3724290892c150dfb 391 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 56 294 5.5E-34 T 28-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 CO704_RS16080 a2b8376734bc72e3724290892c150dfb 391 Pfam PF07201 HrpJ-like domain 66 235 2.7E-22 T 28-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 CO704_RS20560 5c5c95127ae34f122dad9cf4bbe8198d 347 SUPERFAMILY SSF161098 211 330 3.14E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20560 5c5c95127ae34f122dad9cf4bbe8198d 347 SUPERFAMILY SSF161098 104 172 3.14E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20560 5c5c95127ae34f122dad9cf4bbe8198d 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 347 1.1E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20560 5c5c95127ae34f122dad9cf4bbe8198d 347 Gene3D G3DSA:1.10.3720.10 6 336 3.2E-42 T 28-03-2018 CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 SUPERFAMILY SSF52833 16 165 1.9E-49 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 PIRSF PIRSF000216 1 166 7.5E-55 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 Gene3D G3DSA:3.40.30.10 84 166 1.5E-12 T 28-03-2018 CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 2.9E-50 T 28-03-2018 CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 5.2E-53 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06560 555962b4f6336360f32add45bb6a2fce 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Gene3D G3DSA:1.10.287.1060 250 341 0.016 T 28-03-2018 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 SUPERFAMILY SSF47170 41 179 4.71E-19 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 SUPERFAMILY SSF58104 248 529 1.44E-73 T 28-03-2018 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 SMART SM00304 228 280 1.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 SMART SM00283 281 528 7.0E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Gene3D G3DSA:1.10.287.950 342 532 2.6E-48 T 28-03-2018 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 496 2.6E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Gene3D G3DSA:1.20.120.30 37 200 2.5E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 SMART SM00319 50 190 2.3E-17 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 2.4E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 2.4E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 2.4E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 73 88 2.4E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 2.4E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Pfam PF02203 Tar ligand binding domain homologue 15 181 5.9E-33 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 306 328 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS12150 f749b6664f9c00e58cfb27cedb6f53ac 564 Pfam PF00672 HAMP domain 229 276 8.6E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 SUPERFAMILY SSF46689 5 77 1.44E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 60 2.1E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 Gene3D G3DSA:1.10.10.60 2 67 2.5E-17 T 28-03-2018 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 Gene3D G3DSA:1.10.357.10 68 199 3.2E-16 T 28-03-2018 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 SUPERFAMILY SSF48498 84 194 1.07E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03230 ddc826223c5bb2781a020c507efc2ee0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Gene3D G3DSA:1.25.60.10 34 151 5.2E-14 T 28-03-2018 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 SMART SM00924 59 162 7.0E-29 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 SUPERFAMILY SSF158791 45 158 1.96E-22 T 28-03-2018 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Pfam PF01769 Divalent cation transporter 346 467 2.2E-23 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 SUPERFAMILY SSF161093 303 474 7.72E-47 T 28-03-2018 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 TIGRFAM TIGR00400 mgtE: magnesium transporter 46 474 2.9E-73 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Pfam PF03448 MgtE intracellular N domain 61 159 1.3E-21 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Pfam PF00571 CBS domain 229 280 0.0011 T 28-03-2018 IPR000644 CBS domain CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Gene3D G3DSA:3.10.580.10 152 287 9.1E-14 T 28-03-2018 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 SUPERFAMILY SSF54631 161 300 6.73E-24 T 28-03-2018 CO704_RS06770 eb959ecdfd0931fe3cdf240ff7bf4c75 475 Gene3D G3DSA:1.10.357.20 302 475 9.5E-32 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CO704_RS01005 a7faa08c2a84e818a4b07bc7136663bf 184 Gene3D G3DSA:3.40.50.360 1 181 5.1E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS01005 a7faa08c2a84e818a4b07bc7136663bf 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 49.836 T 28-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CO704_RS01005 a7faa08c2a84e818a4b07bc7136663bf 184 Pfam PF02525 Flavodoxin-like fold 7 174 1.1E-38 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS01005 a7faa08c2a84e818a4b07bc7136663bf 184 SUPERFAMILY SSF52218 6 177 4.42E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 Gene3D G3DSA:3.30.930.10 2 325 1.1E-75 T 28-03-2018 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 PIRSF PIRSF001549 2 423 4.0E-127 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.573 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 Pfam PF03129 Anticodon binding domain 340 421 9.6E-11 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 SUPERFAMILY SSF52954 329 423 4.74E-24 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-47 T 28-03-2018 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 3.6E-156 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 SUPERFAMILY SSF55681 5 318 2.68E-104 T 28-03-2018 CO704_RS04990 dfdd4e87a0bd49c0e1f85adbf1e836e9 424 Gene3D G3DSA:3.40.50.800 326 424 1.1E-17 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS00605 9e59bea04ecfe6b982d4cd71b1325f7c 165 Pfam PF00583 Acetyltransferase (GNAT) family 36 137 4.9E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS00605 9e59bea04ecfe6b982d4cd71b1325f7c 165 Gene3D G3DSA:3.40.630.30 1 164 2.5E-36 T 28-03-2018 CO704_RS00605 9e59bea04ecfe6b982d4cd71b1325f7c 165 SUPERFAMILY SSF55729 4 162 4.01E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS10535 686580bfdc214c382a34b2d5a38edc7b 306 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 5 266 57.674 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CO704_RS10535 686580bfdc214c382a34b2d5a38edc7b 306 Pfam PF01171 PP-loop family 37 196 2.7E-12 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CO704_RS10535 686580bfdc214c382a34b2d5a38edc7b 306 SUPERFAMILY SSF52402 12 230 4.66E-53 T 28-03-2018 CO704_RS10535 686580bfdc214c382a34b2d5a38edc7b 306 Gene3D G3DSA:3.40.50.620 3 237 2.9E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS10535 686580bfdc214c382a34b2d5a38edc7b 306 PIRSF PIRSF004976 1 268 1.2E-75 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 4.2E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 SUPERFAMILY SSF46894 828 892 4.08E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 SMART SM00421 833 890 1.2E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 Gene3D G3DSA:1.10.10.10 833 893 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 Gene3D G3DSA:1.25.40.10 443 808 4.3E-46 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 SUPERFAMILY SSF52540 9 167 6.89E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 SUPERFAMILY SSF48452 439 803 9.95E-152 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 38.772 T 28-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT CO704_RS00695 c4307c6af1611ebdb9897129423e546f 901 Gene3D G3DSA:3.40.50.300 15 292 3.1E-4 T 28-03-2018 CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 SUPERFAMILY SSF53901 216 408 2.24E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 Gene3D G3DSA:3.40.47.10 5 260 9.0E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 SMART SM00825 Beta-ketoacyl synthase 5 378 6.8E-12 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 Gene3D G3DSA:3.40.47.10 261 408 6.6E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.6E-41 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 4.2E-30 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CO704_RS25690 c6b3807d1fa414c69b9849c81b0dc3a0 409 SUPERFAMILY SSF53901 3 252 9.79E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 PIRSF PIRSF006443 1 166 3.1E-62 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 SMART SM00852 14 158 3.4E-30 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.5E-81 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.9E-33 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 Gene3D G3DSA:3.40.980.10 3 170 4.1E-38 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 SUPERFAMILY SSF53218 8 168 5.5E-48 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS16430 996f3d38ce888b2d067e9161162a0651 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 3.3E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS08095 c596820c714a4ecaea302fc13aace8b5 326 SMART SM00901 177 276 1.9E-29 T 28-03-2018 IPR014966 FRG domain CO704_RS08095 c596820c714a4ecaea302fc13aace8b5 326 Pfam PF08867 FRG domain 181 271 1.3E-19 T 28-03-2018 IPR014966 FRG domain CO704_RS21260 75e1b97b2129eddf7610dcc0868208fe 276 Pfam PF01039 Carboxyl transferase domain 12 231 1.2E-15 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CO704_RS21260 75e1b97b2129eddf7610dcc0868208fe 276 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 274 3.9E-115 T 28-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 CO704_RS21260 75e1b97b2129eddf7610dcc0868208fe 276 Gene3D G3DSA:3.90.226.10 6 273 2.6E-39 T 28-03-2018 CO704_RS21260 75e1b97b2129eddf7610dcc0868208fe 276 SUPERFAMILY SSF52096 10 228 2.03E-36 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 Gene3D G3DSA:3.90.79.10 1 147 3.1E-29 T 28-03-2018 CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 SUPERFAMILY SSF55811 2 132 1.0E-28 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.1E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.1E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 Pfam PF00293 NUDIX domain 4 114 1.4E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS14265 e7d91201056275debedf1c68d80c241c 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 Gene3D G3DSA:1.10.10.10 1 82 3.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 SUPERFAMILY SSF46785 1 86 2.29E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 Gene3D G3DSA:3.40.190.10 196 265 2.9E-9 T 28-03-2018 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 Gene3D G3DSA:3.40.190.10 83 195 2.7E-18 T 28-03-2018 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 Pfam PF03466 LysR substrate binding domain 89 293 1.6E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23400 37ff601f231a6d18ac02f4b3096348f3 297 SUPERFAMILY SSF53850 89 293 3.91E-30 T 28-03-2018 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 3.0E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 3.0E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 3.0E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 3.0E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 3.0E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Pfam PF14310 Fibronectin type III-like domain 686 754 9.3E-22 T 28-03-2018 IPR026891 Fibronectin type III-like domain CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Gene3D G3DSA:2.60.40.10 649 765 1.8E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 3.7E-64 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 9.9E-97 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 SUPERFAMILY SSF51445 34 394 9.9E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Gene3D G3DSA:3.20.20.300 32 375 3.4E-103 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 Gene3D G3DSA:3.40.50.1700 380 648 8.1E-88 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 SMART SM01217 685 754 8.9E-30 T 28-03-2018 IPR026891 Fibronectin type III-like domain CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 SUPERFAMILY SSF52279 395 464 6.8E-61 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 SUPERFAMILY SSF52279 495 651 6.8E-61 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS16285 68c5bd34b19e214ddda322859fa506fb 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 Pfam PF00005 ABC transporter 269 423 5.2E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 Pfam PF00005 ABC transporter 22 169 1.3E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 SUPERFAMILY SSF52540 246 484 2.24E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 SMART SM00382 29 225 3.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 SMART SM00382 277 472 1.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 Gene3D G3DSA:3.40.50.300 255 501 6.4E-41 T 28-03-2018 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 Gene3D G3DSA:3.40.50.300 1 254 4.2E-51 T 28-03-2018 CO704_RS24050 91c3f8cb1d8078223d942ebc6b7889a0 504 SUPERFAMILY SSF52540 2 231 5.88E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 Pfam PF03466 LysR substrate binding domain 96 281 7.5E-24 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 Gene3D G3DSA:3.40.190.10 177 255 1.7E-10 T 28-03-2018 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 Gene3D G3DSA:1.10.10.10 1 88 2.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.9E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 Gene3D G3DSA:3.40.190.10 93 176 6.7E-11 T 28-03-2018 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 SUPERFAMILY SSF53850 95 285 5.61E-26 T 28-03-2018 CO704_RS24755 53f24c9f22e76ba6685bfb143f8ffae3 287 SUPERFAMILY SSF46785 3 84 5.71E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06050 46a3825881f96447a5488b3cf2f3317b 235 Gene3D G3DSA:3.30.450.20 158 234 1.6E-6 T 28-03-2018 CO704_RS06050 46a3825881f96447a5488b3cf2f3317b 235 Pfam PF02743 Cache domain 13 213 7.8E-13 T 28-03-2018 IPR033479 Double Cache domain 1 CO704_RS06050 46a3825881f96447a5488b3cf2f3317b 235 Gene3D G3DSA:3.30.450.20 40 157 6.2E-16 T 28-03-2018 CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 Pfam PF04358 DsrC like protein 4 109 7.8E-46 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 Gene3D G3DSA:1.10.10.370 40 108 1.5E-32 T 28-03-2018 CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 5.0E-50 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 Gene3D G3DSA:3.30.1420.10 2 39 4.6E-17 T 28-03-2018 CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 PIRSF PIRSF006223 2 109 3.3E-47 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CO704_RS15315 041950ad6f7a5fdf66d19665abd36d7d 109 SUPERFAMILY SSF69721 2 109 1.31E-41 T 28-03-2018 IPR025526 DsrC-like domain CO704_RS23305 38300aec74bc2508586a7a892c724653 246 Gene3D G3DSA:3.20.20.70 42 223 9.6E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS23305 38300aec74bc2508586a7a892c724653 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.457 T 28-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS23305 38300aec74bc2508586a7a892c724653 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 4.1E-71 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS23305 38300aec74bc2508586a7a892c724653 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 3.9E-52 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 117 201 1.8E-16 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 9.0E-24 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 116 198 6.7E-30 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 38.004 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.8E-32 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 SUPERFAMILY SSF141734 5 121 8.76E-48 T 28-03-2018 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 SUPERFAMILY SSF101386 114 202 2.4E-23 T 28-03-2018 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.226 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CO704_RS07665 c89cdce86bdf9ce0ba865db4a9a696a5 203 Gene3D G3DSA:1.10.287.1080 111 203 1.6E-19 T 28-03-2018 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 Pfam PF04542 Sigma-70 region 2 25 91 3.3E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 Pfam PF08281 Sigma-70, region 4 129 180 4.5E-19 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 Gene3D G3DSA:1.10.10.10 115 187 2.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 2.0E-98 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 SUPERFAMILY SSF88946 2 104 2.35E-30 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 Gene3D G3DSA:1.10.1740.10 1 114 1.3E-30 T 28-03-2018 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS04575 3e39eb4712de490126d7b0d83597ac61 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 8.9E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Gene3D G3DSA:2.60.40.420 28 164 1.2E-19 T 28-03-2018 IPR008972 Cupredoxin CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 SUPERFAMILY SSF49503 315 466 2.8E-18 T 28-03-2018 IPR008972 Cupredoxin CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 SUPERFAMILY SSF49503 3 165 1.08E-22 T 28-03-2018 IPR008972 Cupredoxin CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Gene3D G3DSA:2.60.40.420 168 295 7.4E-24 T 28-03-2018 IPR008972 Cupredoxin CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Gene3D G3DSA:2.60.40.420 346 470 1.9E-15 T 28-03-2018 IPR008972 Cupredoxin CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Pfam PF07731 Multicopper oxidase 357 468 1.4E-12 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.195 T 28-03-2018 IPR026589 Cell division protein FtsP GO:0043093 CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 Pfam PF07732 Multicopper oxidase 52 166 2.2E-24 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CO704_RS02505 a4d94adfc4aa027a71d037d7151b8586 470 SUPERFAMILY SSF49503 172 288 1.05E-28 T 28-03-2018 IPR008972 Cupredoxin CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 SUPERFAMILY SSF52540 3 248 2.3E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 4 250 9.4E-122 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 Gene3D G3DSA:3.40.50.300 2 252 4.5E-62 T 28-03-2018 CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 Pfam PF00005 ABC transporter 23 173 5.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 SMART SM00382 30 223 7.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 PIRSF PIRSF037116 1 252 5.2E-139 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CO704_RS22355 12d3ebb13de666bafd67ff3121f5746e 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 1.2E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SMART SM00388 203 269 4.0E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SUPERFAMILY SSF55874 259 423 5.24E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Gene3D G3DSA:1.10.287.130 209 265 2.4E-18 T 28-03-2018 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SUPERFAMILY SSF47384 190 268 6.28E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SMART SM00387 313 425 1.9E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 4.3E-136 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Gene3D G3DSA:3.30.565.10 284 434 6.6E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.2E-27 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SUPERFAMILY SSF55785 87 195 7.85E-12 T 28-03-2018 IPR000014 PAS domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 6.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 6.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 6.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 6.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 SMART SM00091 98 164 2.5E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 1.1E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Pfam PF00989 PAS fold 99 194 6.9E-9 T 28-03-2018 IPR013767 PAS fold GO:0006355 CO704_RS18410 d0d6459a115c37db28d039da63d142f3 435 Gene3D G3DSA:3.30.450.20 97 208 9.3E-15 T 28-03-2018 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 368 7.5E-71 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 1.7E-160 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 Pfam PF02441 Flavoprotein 6 178 9.2E-42 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 SUPERFAMILY SSF102645 184 399 2.49E-77 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 Gene3D G3DSA:3.40.50.1950 2 184 1.6E-52 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 Gene3D G3DSA:3.40.50.10300 185 402 3.7E-65 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CO704_RS23820 0fd81db94d9e5742f8dc3b432fbead33 403 SUPERFAMILY SSF52507 3 180 4.84E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 110 128 - T 28-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 Gene3D G3DSA:1.50.10.10 16 332 6.1E-80 T 28-03-2018 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 Pfam PF01270 Glycosyl hydrolases family 8 8 332 1.5E-108 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 110 128 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 174 191 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 239 248 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 318 332 5.8E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24435 37d309f69f93015077d68445ada8bf9d 332 SUPERFAMILY SSF48208 7 329 5.83E-84 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 SMART SM00382 510 703 1.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 Gene3D G3DSA:3.90.70.10 20 141 2.8E-6 T 28-03-2018 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 Pfam PF00005 ABC transporter 505 650 1.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 Gene3D G3DSA:3.40.50.300 481 712 9.1E-55 T 28-03-2018 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 Gene3D G3DSA:1.20.1560.10 164 473 1.0E-35 T 28-03-2018 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 SUPERFAMILY SSF52540 472 699 7.58E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 Pfam PF00664 ABC transporter transmembrane region 172 437 1.8E-26 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 19 711 2.4E-235 T 28-03-2018 IPR017750 ATPase, type I secretion system CO704_RS04330 8de17195f265b150ec5dac9c9b87aafa 735 SUPERFAMILY SSF90123 156 466 7.06E-52 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 Pfam PF01047 MarR family 32 88 2.1E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 Pfam PF00583 Acetyltransferase (GNAT) family 198 284 4.0E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 SUPERFAMILY SSF55729 149 307 4.97E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 SMART SM00347 25 124 3.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 SUPERFAMILY SSF46785 11 138 1.28E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 Gene3D G3DSA:3.40.630.30 139 307 5.1E-26 T 28-03-2018 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 Gene3D G3DSA:1.10.10.10 1 138 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS21080 b8efb8199a15f57913d5de65f28a8c6f 308 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.0E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS14370 41378fa832cff86c7805c71cf04ddb40 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 251 1.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14370 41378fa832cff86c7805c71cf04ddb40 263 Gene3D G3DSA:1.10.3720.10 5 260 6.1E-39 T 28-03-2018 CO704_RS14370 41378fa832cff86c7805c71cf04ddb40 263 SUPERFAMILY SSF161098 3 255 3.27E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS21780 9027fa15980650e9d49633928db27075 306 Gene3D G3DSA:3.40.50.1820 1 303 8.5E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS21780 9027fa15980650e9d49633928db27075 306 SUPERFAMILY SSF53474 25 297 1.07E-59 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS21780 9027fa15980650e9d49633928db27075 306 Pfam PF07859 alpha/beta hydrolase fold 75 280 1.4E-62 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 SUPERFAMILY SSF50891 88 214 2.24E-44 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 5.5E-84 T 28-03-2018 IPR010016 KipI family CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 SMART SM00796 4 202 1.2E-84 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 SUPERFAMILY SSF160467 5 93 7.85E-6 T 28-03-2018 CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 Gene3D G3DSA:3.30.1360.40 4 82 7.4E-6 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 1.4E-66 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CO704_RS16720 744d9117fa5dec928c670154287f45f6 218 Gene3D G3DSA:2.40.100.10 86 216 1.9E-49 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 PIRSF PIRSF003078 1 207 9.8E-67 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 203 8.7E-58 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.669 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 SUPERFAMILY SSF53335 5 204 2.28E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 3.9E-64 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CO704_RS24095 85c5d57756f8607d4f45450973354a37 207 Gene3D G3DSA:3.40.50.150 1 207 4.1E-38 T 28-03-2018 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 SUPERFAMILY SSF54368 36 132 8.11E-8 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 Gene3D G3DSA:3.10.20.70 32 129 1.5E-14 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 SMART SM01230 133 390 1.2E-95 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 SUPERFAMILY SSF55931 134 469 2.62E-96 T 28-03-2018 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 Pfam PF00120 Glutamine synthetase, catalytic domain 134 467 2.6E-101 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CO704_RS07875 0889210e89b10f0d40aa16c0499f532a 472 Gene3D G3DSA:3.30.590.10 130 472 2.5E-88 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 Gene3D G3DSA:1.10.150.310 75 118 3.4E-12 T 28-03-2018 CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 56 117 1.2E-27 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 SMART SM00278 96 115 4.2 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 SMART SM00278 66 85 14.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 SUPERFAMILY SSF47781 39 116 3.11E-23 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 Gene3D G3DSA:1.10.150.20 28 74 1.2E-6 T 28-03-2018 CO704_RS18155 efaa316d6cc20427c7ed30eb2e670fb7 118 Pfam PF12836 Helix-hairpin-helix motif 55 116 7.8E-18 T 28-03-2018 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 Gene3D G3DSA:2.40.170.20 185 720 3.2E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 719 7.0E-129 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 Pfam PF00593 TonB dependent receptor 257 719 1.4E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 4.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 Gene3D G3DSA:2.170.130.10 26 184 3.0E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS13705 c1f56a7e73c98d4616c766b8b048bf66 720 SUPERFAMILY SSF56935 56 720 6.54E-130 T 28-03-2018 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 SMART SM00382 26 223 1.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 SMART SM00382 337 506 3.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 Pfam PF12848 ABC transporter 217 297 1.5E-28 T 28-03-2018 IPR032781 ABC-transporter extension domain CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 Gene3D G3DSA:3.40.50.300 309 607 1.7E-52 T 28-03-2018 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 Gene3D G3DSA:3.40.50.300 2 279 1.9E-53 T 28-03-2018 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 SUPERFAMILY SSF52540 294 517 2.82E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 SUPERFAMILY SSF52540 119 253 4.1E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 SUPERFAMILY SSF52540 2 92 4.1E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 Pfam PF00005 ABC transporter 328 459 6.5E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS01000 529fdb85ec42c95018aa0fd9c0afeb7e 634 Pfam PF00005 ABC transporter 17 178 1.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 SUPERFAMILY SSF46785 11 104 1.93E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 Gene3D G3DSA:1.10.10.10 2 82 3.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 SMART SM00345 22 80 2.0E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 Pfam PF07729 FCD domain 90 209 1.1E-17 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 8.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 Gene3D G3DSA:1.20.120.530 83 229 1.7E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 SMART SM00895 90 213 3.0E-9 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS25980 e0118ef76c8e407fa17f480818f73773 231 SUPERFAMILY SSF48008 89 213 1.49E-17 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS17155 8876fc469982328c224ca3496566015e 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CO704_RS17155 8876fc469982328c224ca3496566015e 391 Pfam PF01494 FAD binding domain 7 340 9.6E-32 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CO704_RS17155 8876fc469982328c224ca3496566015e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 2.0E-18 T 28-03-2018 CO704_RS17155 8876fc469982328c224ca3496566015e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.0E-18 T 28-03-2018 CO704_RS17155 8876fc469982328c224ca3496566015e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 2.0E-18 T 28-03-2018 CO704_RS17155 8876fc469982328c224ca3496566015e 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.0E-18 T 28-03-2018 CO704_RS17155 8876fc469982328c224ca3496566015e 391 Gene3D G3DSA:3.50.50.60 6 361 3.4E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS17155 8876fc469982328c224ca3496566015e 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 4.0E-128 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CO704_RS17155 8876fc469982328c224ca3496566015e 391 SUPERFAMILY SSF51905 6 178 1.3E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS17155 8876fc469982328c224ca3496566015e 391 SUPERFAMILY SSF51905 267 382 1.3E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.5E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 SUPERFAMILY SSF51735 7 254 6.8E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 Gene3D G3DSA:3.40.50.720 47 257 4.0E-52 T 28-03-2018 CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 Gene3D G3DSA:3.40.50.720 1 46 2.8E-7 T 28-03-2018 CO704_RS17820 2e94013d002c6c9348fba7aa561d9be8 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 5.8E-52 T 28-03-2018 CO704_RS19495 eb17a3ebd3ec8a38ec6c4bfeb56683e2 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 9.0E-43 T 28-03-2018 CO704_RS19495 eb17a3ebd3ec8a38ec6c4bfeb56683e2 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 1.2E-9 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CO704_RS12565 fd8f5b175a672a64f55c0b363c5b97bf 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.256 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CO704_RS12565 fd8f5b175a672a64f55c0b363c5b97bf 201 Pfam PF02525 Flavodoxin-like fold 3 194 2.3E-46 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS12565 fd8f5b175a672a64f55c0b363c5b97bf 201 Gene3D G3DSA:3.40.50.360 2 201 2.7E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS12565 fd8f5b175a672a64f55c0b363c5b97bf 201 SUPERFAMILY SSF52218 1 199 1.59E-59 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.8E-46 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 Gene3D G3DSA:3.40.50.2000 1 177 5.7E-45 T 28-03-2018 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 347 1.5E-111 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 Gene3D G3DSA:3.40.50.2000 178 347 4.0E-30 T 28-03-2018 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 34.859 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 1.5E-35 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CO704_RS19640 40318861c063dc51547b07e1af04e5e1 355 SUPERFAMILY SSF53756 6 352 8.17E-129 T 28-03-2018 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 PIRSF PIRSF001499 1 373 1.4E-184 T 28-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 Pfam PF02153 Prephenate dehydrogenase 138 344 1.6E-29 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 SUPERFAMILY SSF48600 4 88 3.85E-23 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 SUPERFAMILY SSF51735 91 238 3.39E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 SMART SM00830 9 89 1.3E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 Gene3D G3DSA:3.40.50.720 91 247 7.7E-26 T 28-03-2018 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 Gene3D G3DSA:1.10.3660.10 249 372 1.3E-32 T 28-03-2018 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 SUPERFAMILY SSF48179 241 366 2.83E-42 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 Pfam PF01817 Chorismate mutase type II 9 86 6.6E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 9.6E-45 T 28-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CO704_RS04435 05c813d276b7bfef37e38e22d9b57bb5 373 Gene3D G3DSA:1.20.59.10 2 90 8.6E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CO704_RS11815 dc32a7c2de83d4c547c686c618872f01 95 PIRSF PIRSF030200 1 95 1.2E-43 T 28-03-2018 IPR009359 Phenylacetic acid degradation B CO704_RS11815 dc32a7c2de83d4c547c686c618872f01 95 Pfam PF06243 Phenylacetic acid degradation B 6 91 3.7E-39 T 28-03-2018 IPR009359 Phenylacetic acid degradation B CO704_RS11815 dc32a7c2de83d4c547c686c618872f01 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 2.9E-49 T 28-03-2018 IPR009359 Phenylacetic acid degradation B CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 Gene3D G3DSA:1.10.10.10 122 232 7.9E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.9E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 SMART SM00862 152 228 1.1E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 Gene3D G3DSA:3.40.50.2300 2 121 2.4E-38 T 28-03-2018 CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 SMART SM00448 2 111 4.8E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 SUPERFAMILY SSF52172 2 188 6.83E-41 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS23680 c1192cc50348ee12d2e03061fcd2b5e1 232 Pfam PF00072 Response regulator receiver domain 4 112 7.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 Pfam PF12464 Maltose acetyltransferase 7 56 1.4E-17 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 Gene3D G3DSA:2.160.10.10 2 183 1.5E-55 T 28-03-2018 CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 109 0.0068 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.8E-11 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 SUPERFAMILY SSF51161 4 182 2.63E-54 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS05340 1fe6cb33162d9e234274a7defc2eb1a4 183 SMART SM01266 5 59 1.2E-19 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 SUPERFAMILY SSF51338 362 436 1.37E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 Gene3D G3DSA:2.30.40.10 344 436 1.1E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 454 1.2E-204 T 28-03-2018 IPR010252 Formiminoglutamate deiminase CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 Gene3D G3DSA:3.20.20.140 46 343 9.6E-43 T 28-03-2018 CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 Pfam PF01979 Amidohydrolase family 48 430 7.5E-29 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS09450 0103e971914f96ac0551fc8159fe84ad 455 SUPERFAMILY SSF51556 51 375 6.35E-70 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS24040 cb60da73688851c2642dd16a009f389e 295 Gene3D G3DSA:3.40.50.2300 132 295 8.3E-46 T 28-03-2018 CO704_RS24040 cb60da73688851c2642dd16a009f389e 295 Gene3D G3DSA:3.40.50.2300 27 131 1.2E-25 T 28-03-2018 CO704_RS24040 cb60da73688851c2642dd16a009f389e 295 Pfam PF13407 Periplasmic binding protein domain 29 281 2.0E-56 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS24040 cb60da73688851c2642dd16a009f389e 295 SUPERFAMILY SSF53822 10 295 2.36E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 Gene3D G3DSA:3.40.190.10 92 184 2.9E-22 T 28-03-2018 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 Pfam PF03466 LysR substrate binding domain 93 295 1.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 SUPERFAMILY SSF53850 93 296 5.12E-34 T 28-03-2018 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 Gene3D G3DSA:3.40.190.10 185 286 2.3E-15 T 28-03-2018 CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 SUPERFAMILY SSF46785 3 115 1.18E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08245 2612e541ea4a27754c35b6263f17e960 307 Gene3D G3DSA:1.10.10.10 1 90 1.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04065 af5a512ef3ec46c532b9e24d3f635601 378 SUPERFAMILY SSF53474 55 371 4.17E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS04065 af5a512ef3ec46c532b9e24d3f635601 378 Gene3D G3DSA:3.40.50.1820 53 374 9.6E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS04065 af5a512ef3ec46c532b9e24d3f635601 378 Pfam PF00561 alpha/beta hydrolase fold 117 236 7.0E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS04065 af5a512ef3ec46c532b9e24d3f635601 378 PIRSF PIRSF000443 31 374 6.6E-52 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CO704_RS13010 e1b6d9e695bb11cad44affeaed9e6b3d 194 Gene3D G3DSA:2.30.110.10 11 191 4.6E-38 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS13010 e1b6d9e695bb11cad44affeaed9e6b3d 194 Pfam PF01613 Flavin reductase like domain 20 153 9.1E-16 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CO704_RS13010 e1b6d9e695bb11cad44affeaed9e6b3d 194 SUPERFAMILY SSF50475 9 185 6.38E-37 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS13010 e1b6d9e695bb11cad44affeaed9e6b3d 194 SMART SM00903 15 157 1.1E-14 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 28.349 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.1E-58 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 Pfam PF13500 AAA domain 5 214 6.1E-38 T 28-03-2018 CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 Gene3D G3DSA:3.40.50.300 2 217 4.3E-56 T 28-03-2018 CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 SUPERFAMILY SSF52540 4 214 1.81E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16465 f0b53ff0c12df3380c1a14a7ca4a5e4b 227 PIRSF PIRSF006755 1 226 1.5E-80 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 194 3.4E-39 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00860 a32de0456477927779b6654461b8f65b 237 Gene3D G3DSA:1.10.150.240 33 84 7.4E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 Gene3D G3DSA:3.40.50.1000 85 225 3.6E-38 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00860 a32de0456477927779b6654461b8f65b 237 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 225 35.247 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 189 6.7E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 4.2E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 4.2E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.2E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 4.2E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 194 4.2E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 223 8.8E-81 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 85 192 1.6E-12 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CO704_RS00860 a32de0456477927779b6654461b8f65b 237 Gene3D G3DSA:3.40.50.1000 2 32 0.032 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00860 a32de0456477927779b6654461b8f65b 237 SUPERFAMILY SSF56784 2 222 4.52E-61 T 28-03-2018 IPR023214 HAD-like domain CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 SMART SM00857 3 139 4.8E-49 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:1.20.5.40 109 137 1.1E-12 T 28-03-2018 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 Pfam PF00239 Resolvase, N terminal domain 4 137 5.9E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:1.10.10.60 139 181 1.7E-12 T 28-03-2018 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 SUPERFAMILY SSF46689 141 180 2.84E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 Pfam PF02796 Helix-turn-helix domain of resolvase 141 180 5.6E-12 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 SUPERFAMILY SSF53041 1 138 3.14E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:3.40.50.1390 1 108 1.3E-36 T 28-03-2018 CO704_RS25155 07df1d576593474c714ad8fd1ef269fc 181 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 SMART SM00857 3 139 4.8E-49 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:1.20.5.40 109 137 1.1E-12 T 28-03-2018 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 Pfam PF00239 Resolvase, N terminal domain 4 137 5.9E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:1.10.10.60 139 181 1.7E-12 T 28-03-2018 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 SUPERFAMILY SSF46689 141 180 2.84E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 Pfam PF02796 Helix-turn-helix domain of resolvase 141 180 5.6E-12 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 SUPERFAMILY SSF53041 1 138 3.14E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 Gene3D G3DSA:3.40.50.1390 1 108 1.3E-36 T 28-03-2018 CO704_RS10890 07df1d576593474c714ad8fd1ef269fc 181 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS05345 59b96d9c77bb1d5fe972f77112659890 71 Pfam PF05321 Haemolysin expression modulating protein 12 68 2.0E-33 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS05345 59b96d9c77bb1d5fe972f77112659890 71 SUPERFAMILY SSF68989 4 71 1.31E-31 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS05345 59b96d9c77bb1d5fe972f77112659890 71 Gene3D G3DSA:1.20.1280.40 5 70 3.4E-34 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 Pfam PF00583 Acetyltransferase (GNAT) family 171 211 6.2E-6 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 Gene3D G3DSA:3.40.630.30 71 182 1.2E-8 T 28-03-2018 CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 45 225 3.2E-86 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 SUPERFAMILY SSF55729 42 223 1.19E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 Gene3D G3DSA:3.40.630.30 183 223 3.4E-6 T 28-03-2018 CO704_RS23330 ad450bb3e4cb0e5c6f1d5d818b3295db 225 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 45 225 45.732 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 298 2.2E-20 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 SUPERFAMILY SSF51735 1 129 2.37E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 299 3.7E-55 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 Gene3D G3DSA:3.40.50.720 1 173 6.0E-30 T 28-03-2018 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 SUPERFAMILY SSF48179 177 301 1.67E-20 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 Gene3D G3DSA:1.10.1040.10 177 310 1.0E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS04055 c759046d8c4f1af845d284731b484bac 316 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 3.3E-35 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SMART SM00387 774 884 1.3E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:3.30.450.40 500 653 1.3E-10 T 28-03-2018 IPR029016 GAF domain-like CO704_RS16760 435529b0fd5719681a1513272929398f 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 839 2.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS16760 435529b0fd5719681a1513272929398f 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 881 2.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS16760 435529b0fd5719681a1513272929398f 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 825 2.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS16760 435529b0fd5719681a1513272929398f 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 862 2.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SUPERFAMILY SSF47384 657 731 6.47E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS16760 435529b0fd5719681a1513272929398f 895 Pfam PF13492 GAF domain 528 644 9.6E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SMART SM00388 663 730 2.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SUPERFAMILY SSF52402 253 365 1.93E-8 T 28-03-2018 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SUPERFAMILY SSF55781 498 644 9.08E-7 T 28-03-2018 IPR029016 GAF domain-like CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:3.40.50.620 227 372 1.2E-13 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:3.40.50.300 21 147 1.1E-23 T 28-03-2018 CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:1.10.287.130 654 724 1.2E-10 T 28-03-2018 CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:3.30.565.10 725 884 8.7E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16760 435529b0fd5719681a1513272929398f 895 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 1.2E-27 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CO704_RS16760 435529b0fd5719681a1513272929398f 895 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 883 2.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16760 435529b0fd5719681a1513272929398f 895 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 230 1.1E-97 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CO704_RS16760 435529b0fd5719681a1513272929398f 895 SUPERFAMILY SSF55874 719 886 1.57E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16760 435529b0fd5719681a1513272929398f 895 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 8.8E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS16760 435529b0fd5719681a1513272929398f 895 Gene3D G3DSA:1.20.120.620 401 499 5.5E-25 T 28-03-2018 CO704_RS18400 06f780e277ad61d94796c8598b904f00 452 Pfam PF00324 Amino acid permease 15 448 4.8E-104 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS18400 06f780e277ad61d94796c8598b904f00 452 PIRSF PIRSF006060 1 450 1.8E-75 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS18400 06f780e277ad61d94796c8598b904f00 452 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS16030 04790e67229d3483fedf902f937ca740 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 3.1E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS16030 04790e67229d3483fedf902f937ca740 86 SUPERFAMILY SSF159871 3 86 3.53E-26 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS16030 04790e67229d3483fedf902f937ca740 86 Gene3D G3DSA:3.30.1660.10 21 86 1.4E-22 T 28-03-2018 IPR025543 Dodecin-like CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 3.2E-4 T 28-03-2018 CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 Gene3D G3DSA:3.40.50.720 5 228 1.4E-59 T 28-03-2018 CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 Pfam PF00106 short chain dehydrogenase 8 197 1.1E-56 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS17980 e27fb2f08504a57d076d7451f05ed501 246 SUPERFAMILY SSF51735 2 230 6.29E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02155 9a0ec2c600225e25713963dd4e7e05c0 170 Pfam PF11682 Probable zinc-ribbon 18 139 6.7E-25 T 28-03-2018 IPR021696 Protein of unknown function DUF3279 CO704_RS08370 84e86fe58021a57f5e356d419503881e 302 SUPERFAMILY SSF51197 97 275 2.36E-19 T 28-03-2018 CO704_RS08370 84e86fe58021a57f5e356d419503881e 302 Gene3D G3DSA:2.60.120.330 62 244 6.7E-43 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CO704_RS08370 84e86fe58021a57f5e356d419503881e 302 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 222 2.2E-45 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 SUPERFAMILY SSF63829 6 285 1.64E-61 T 28-03-2018 CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 3.5E-23 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 254 5.7E-73 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CO704_RS04440 3ee382033ffd979603f7750ce1542823 290 Gene3D G3DSA:2.120.10.30 3 290 2.7E-35 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CO704_RS01870 d608ab0489497f1edbf0ffb9b84474c6 97 Pfam PF01541 GIY-YIG catalytic domain 4 72 3.7E-15 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS01870 d608ab0489497f1edbf0ffb9b84474c6 97 SUPERFAMILY SSF82771 3 71 3.79E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS01870 d608ab0489497f1edbf0ffb9b84474c6 97 SMART SM00465 2 81 4.0E-4 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS01870 d608ab0489497f1edbf0ffb9b84474c6 97 Gene3D G3DSA:3.40.1440.10 1 79 3.9E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS01870 d608ab0489497f1edbf0ffb9b84474c6 97 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 28.956 T 28-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CO704_RS23240 9076c00fbd475c406c1db46c6206e9c0 849 PIRSF PIRSF001444 1 848 0.0 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CO704_RS23240 9076c00fbd475c406c1db46c6206e9c0 849 Pfam PF12633 Adenylate cyclase NT domain 5 200 3.3E-81 T 28-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CO704_RS23240 9076c00fbd475c406c1db46c6206e9c0 849 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CO704_RS23240 9076c00fbd475c406c1db46c6206e9c0 849 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CO704_RS23240 9076c00fbd475c406c1db46c6206e9c0 849 Pfam PF01295 Adenylate cyclase, class-I 228 825 4.4E-260 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Gene3D G3DSA:1.20.58.370 4 95 9.8E-32 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Gene3D G3DSA:1.10.3720.10 270 514 5.4E-43 T 28-03-2018 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 297 501 5.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Gene3D G3DSA:3.10.650.10 197 268 1.1E-25 T 28-03-2018 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 6.9E-58 T 28-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 SUPERFAMILY SSF161098 261 503 8.5E-61 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 Gene3D G3DSA:2.40.430.10 119 196 7.4E-29 T 28-03-2018 CO704_RS22700 1986a5074511b982a0b253c301eaf656 514 SUPERFAMILY SSF160964 15 260 4.84E-85 T 28-03-2018 CO704_RS25465 4dbebf905c1f6d80670468a7d333665c 62 Pfam PF13610 DDE domain 4 44 2.0E-7 T 28-03-2018 IPR032874 DDE domain CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 SUPERFAMILY SSF53383 16 379 8.62E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 Gene3D G3DSA:3.40.640.10 2 247 1.4E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 379 2.5E-149 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 Gene3D G3DSA:3.90.1150.10 248 380 6.9E-52 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 PIRSF PIRSF001434 1 380 1.7E-142 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS11490 525c9a4fd8787a8bfb513bd5165bdffb 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS11700 f4faf4c51171ef1ee1b7553796c879a6 304 Gene3D G3DSA:1.25.40.10 40 287 7.1E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS11700 f4faf4c51171ef1ee1b7553796c879a6 304 SUPERFAMILY SSF48452 48 119 2.95E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS11700 f4faf4c51171ef1ee1b7553796c879a6 304 Pfam PF14559 Tetratricopeptide repeat 59 114 6.5E-7 T 28-03-2018 CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 PIRSF PIRSF003128 1 553 1.6E-155 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 Gene3D G3DSA:3.40.50.300 1 533 2.8E-43 T 28-03-2018 CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 SUPERFAMILY SSF52540 351 516 6.38E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 SUPERFAMILY SSF52540 1 199 6.38E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 SUPERFAMILY SSF52540 287 322 6.38E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.2E-168 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CO704_RS04365 d15376a9d2df57fb0a041188f0f491e7 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 3.9E-18 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.7E-126 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 SUPERFAMILY SSF53167 3 234 2.62E-94 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 Pfam PF01048 Phosphorylase superfamily 15 218 1.2E-40 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.424 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CO704_RS20090 869c4b2de308671c518534da3d4606c3 239 Gene3D G3DSA:3.40.50.1580 9 235 7.0E-57 T 28-03-2018 CO704_RS13280 52a1d128b4750fae4c986eb4e71dcbd3 195 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 1.7E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS13280 52a1d128b4750fae4c986eb4e71dcbd3 195 Gene3D G3DSA:3.40.630.30 1 193 2.3E-26 T 28-03-2018 CO704_RS13280 52a1d128b4750fae4c986eb4e71dcbd3 195 SUPERFAMILY SSF55729 2 176 7.97E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 310 4.1E-47 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Gene3D G3DSA:3.40.50.150 102 318 1.9E-61 T 28-03-2018 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Gene3D G3DSA:3.30.70.1170 30 101 1.9E-18 T 28-03-2018 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 189 200 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 422 471 8.3E-11 T 28-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 42 311 1.8E-107 T 28-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 7 476 63.513 T 28-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 9 106 4.0E-26 T 28-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 294 311 9.8E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 92 106 9.8E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 123 133 9.8E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 190 202 9.8E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 240 256 9.8E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS09025 6416f3f1e0e633d5335d631917a93192 482 SUPERFAMILY SSF53335 8 311 5.17E-67 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS09575 11f36d5ca1446707c0edfeeb0dba7edc 156 Pfam PF06841 T4-like virus tail tube protein gp19 17 153 3.6E-44 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 CO704_RS09575 11f36d5ca1446707c0edfeeb0dba7edc 156 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 14 154 1.3E-35 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 SMART SM00739 127 154 1.0E-6 T 28-03-2018 IPR005824 KOW CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 Gene3D G3DSA:3.30.70.940 6 119 8.2E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 SUPERFAMILY SSF50104 125 180 1.0E-19 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 6.7E-71 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.701 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 SMART SM00738 6 115 8.6E-51 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 Pfam PF00467 KOW motif 130 162 5.4E-8 T 28-03-2018 IPR005824 KOW CO704_RS22965 bfe6035c5e3437c13b1168e995c2f42b 181 Gene3D G3DSA:2.30.30.30 122 181 1.0E-21 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS13220 b852952f3468ab474821919f4e039406 236 SUPERFAMILY SSF51735 3 235 2.82E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS13220 b852952f3468ab474821919f4e039406 236 Gene3D G3DSA:3.40.50.720 2 236 5.2E-38 T 28-03-2018 CO704_RS13220 b852952f3468ab474821919f4e039406 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS13220 b852952f3468ab474821919f4e039406 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS13220 b852952f3468ab474821919f4e039406 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS13220 b852952f3468ab474821919f4e039406 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 5.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS13220 b852952f3468ab474821919f4e039406 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 234 3.7E-26 T 28-03-2018 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 Pfam PF03466 LysR substrate binding domain 91 280 1.6E-19 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 3.0E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 SUPERFAMILY SSF46785 5 81 9.53E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 Gene3D G3DSA:1.10.10.10 2 86 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 SUPERFAMILY SSF53850 91 293 6.7E-21 T 28-03-2018 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 Gene3D G3DSA:3.40.190.10 184 267 6.0E-7 T 28-03-2018 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17840 628c933c4a00d7aa303514c9207311ce 309 Gene3D G3DSA:3.40.190.10 92 183 8.8E-8 T 28-03-2018 CO704_RS23545 c234befccea818b4ea9338ad216ca7ed 577 Gene3D G3DSA:3.40.720.10 226 534 4.5E-20 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS23545 c234befccea818b4ea9338ad216ca7ed 577 Pfam PF00884 Sulfatase 238 529 2.3E-42 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS23545 c234befccea818b4ea9338ad216ca7ed 577 SUPERFAMILY SSF53649 236 544 1.55E-28 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS00100 55104a62117a4c0e1fe1c98bff2690f5 111 Gene3D G3DSA:3.10.450.50 2 111 2.5E-18 T 28-03-2018 CO704_RS00100 55104a62117a4c0e1fe1c98bff2690f5 111 Pfam PF12680 SnoaL-like domain 9 104 3.0E-15 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CO704_RS00100 55104a62117a4c0e1fe1c98bff2690f5 111 PIRSF PIRSF030561 1 110 1.7E-32 T 28-03-2018 IPR008317 Uncharacterised conserved protein UCP030561 CO704_RS00100 55104a62117a4c0e1fe1c98bff2690f5 111 SUPERFAMILY SSF54427 2 110 1.7E-27 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS25830 a32f067632ec18f555350c8dd94a8000 135 SUPERFAMILY SSF55729 32 135 6.58E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS25830 a32f067632ec18f555350c8dd94a8000 135 Pfam PF00583 Acetyltransferase (GNAT) family 40 113 3.2E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS25830 a32f067632ec18f555350c8dd94a8000 135 Gene3D G3DSA:3.40.630.30 6 134 4.4E-20 T 28-03-2018 CO704_RS07115 b1b1d77079730d074199911a8caa87e9 248 Pfam PF00899 ThiF family 12 245 1.3E-65 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS07115 b1b1d77079730d074199911a8caa87e9 248 SUPERFAMILY SSF69572 3 248 4.97E-90 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS07115 b1b1d77079730d074199911a8caa87e9 248 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 5.5E-132 T 28-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CO704_RS07115 b1b1d77079730d074199911a8caa87e9 248 Gene3D G3DSA:3.40.50.720 1 248 2.9E-80 T 28-03-2018 CO704_RS12815 84880b6a2a268758abb1b175e6467eee 283 Gene3D G3DSA:3.60.15.10 1 276 1.6E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS12815 84880b6a2a268758abb1b175e6467eee 283 Pfam PF00753 Metallo-beta-lactamase superfamily 56 257 4.6E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS12815 84880b6a2a268758abb1b175e6467eee 283 SUPERFAMILY SSF56281 7 265 7.34E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS12815 84880b6a2a268758abb1b175e6467eee 283 SMART SM00849 55 257 4.0E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 Gene3D G3DSA:3.40.50.300 2 270 4.4E-75 T 28-03-2018 CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 Pfam PF00005 ABC transporter 45 192 8.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 Gene3D G3DSA:3.10.580.10 271 399 9.2E-10 T 28-03-2018 CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 5.5E-178 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 SUPERFAMILY SSF52540 43 270 6.77E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 Pfam PF00571 CBS domain 349 392 2.2E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 SMART SM00382 53 242 7.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS03950 8469e83011a69594ea0c1718654b38bb 399 SUPERFAMILY SSF54631 293 392 7.71E-10 T 28-03-2018 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Gene3D G3DSA:2.160.10.10 87 257 7.8E-36 T 28-03-2018 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Gene3D G3DSA:1.10.166.10 3 69 2.0E-28 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.2E-13 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 SUPERFAMILY SSF51161 1 256 1.37E-79 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.0E-25 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.71 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CO704_RS19325 39a6daa827beb9a4e22468937b2c9691 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.3E-163 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.5E-49 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain CO704_RS00745 358def859f27aca81ad4483212c38169 777 SMART SM00732 327 424 8.8E-36 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CO704_RS00745 358def859f27aca81ad4483212c38169 777 SUPERFAMILY SSF47781 470 558 8.0E-28 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS00745 358def859f27aca81ad4483212c38169 777 SMART SM00316 649 720 3.0E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-28 T 28-03-2018 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Pfam PF00575 S1 RNA binding domain 650 720 3.9E-23 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS00745 358def859f27aca81ad4483212c38169 777 SUPERFAMILY SSF47781 560 632 1.07E-19 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS00745 358def859f27aca81ad4483212c38169 777 Gene3D G3DSA:1.10.3500.10 360 498 8.1E-38 T 28-03-2018 IPR023323 Tex-like domain CO704_RS00745 358def859f27aca81ad4483212c38169 777 Gene3D G3DSA:1.10.150.310 499 630 3.5E-45 T 28-03-2018 CO704_RS00745 358def859f27aca81ad4483212c38169 777 SUPERFAMILY SSF158832 2 322 7.06E-119 T 28-03-2018 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Gene3D G3DSA:2.40.50.140 643 725 5.0E-26 T 28-03-2018 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Pfam PF09371 Tex-like protein N-terminal domain 10 193 8.2E-70 T 28-03-2018 IPR018974 Tex-like protein, N-terminal CO704_RS00745 358def859f27aca81ad4483212c38169 777 Gene3D G3DSA:1.10.3500.10 103 359 3.7E-78 T 28-03-2018 IPR023323 Tex-like domain CO704_RS00745 358def859f27aca81ad4483212c38169 777 SUPERFAMILY SSF50249 638 722 4.7E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS00745 358def859f27aca81ad4483212c38169 777 SUPERFAMILY SSF53098 323 469 7.84E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS00745 358def859f27aca81ad4483212c38169 777 Gene3D G3DSA:1.10.10.650 3 102 5.4E-33 T 28-03-2018 IPR023319 Tex-like protein, HTH domain CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 SUPERFAMILY SSF46785 15 97 4.28E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 SUPERFAMILY SSF53850 100 306 1.81E-38 T 28-03-2018 CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 Pfam PF03466 LysR substrate binding domain 99 301 7.4E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 Gene3D G3DSA:3.40.190.10 99 184 3.9E-11 T 28-03-2018 CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 1.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 Gene3D G3DSA:1.10.10.10 13 94 4.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11060 6f2c2d19c2ba938c520ec229fdea37d1 315 Gene3D G3DSA:3.40.190.10 185 274 1.2E-27 T 28-03-2018 CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 4.6E-231 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 268.05 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 SUPERFAMILY SSF53686 86 434 2.61E-53 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 Gene3D G3DSA:3.40.50.1100 73 251 8.2E-25 T 28-03-2018 CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 399 2.3E-63 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 Gene3D G3DSA:3.40.50.1100 252 441 6.4E-28 T 28-03-2018 CO704_RS24835 64f1cb4b60cc43290c21163eae774405 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CO704_RS10675 b471558dcb984722135196fc5e509352 239 SUPERFAMILY SSF52317 27 234 3.01E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS10675 b471558dcb984722135196fc5e509352 239 Pfam PF00117 Glutamine amidotransferase class-I 34 198 1.2E-19 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS10675 b471558dcb984722135196fc5e509352 239 PRINTS PR00096 Glutamine amidotransferase superfamily signature 184 197 4.2E-5 T 28-03-2018 CO704_RS10675 b471558dcb984722135196fc5e509352 239 PRINTS PR00096 Glutamine amidotransferase superfamily signature 93 104 4.2E-5 T 28-03-2018 CO704_RS10675 b471558dcb984722135196fc5e509352 239 Gene3D G3DSA:3.40.50.880 20 236 5.3E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS09680 081d2a4d5f7ec9ae4b83a3a6e834e233 129 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 126 4.3E-42 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CO704_RS09680 081d2a4d5f7ec9ae4b83a3a6e834e233 129 PIRSF PIRSF005610 1 124 1.4E-26 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CO704_RS21760 8265ac8d73bb3bbe0c51f68b372c86a3 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 386 2.5E-48 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS21760 8265ac8d73bb3bbe0c51f68b372c86a3 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 269 3.6E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS21760 8265ac8d73bb3bbe0c51f68b372c86a3 401 SUPERFAMILY SSF111369 59 249 5.36E-23 T 28-03-2018 CO704_RS21760 8265ac8d73bb3bbe0c51f68b372c86a3 401 Gene3D G3DSA:1.20.1600.10 47 330 3.5E-34 T 28-03-2018 CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 SUPERFAMILY SSF52540 547 602 5.1E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 SUPERFAMILY SSF52540 636 738 5.1E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 SUPERFAMILY SSF52540 306 461 5.1E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 SMART SM00490 612 729 5.5E-10 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 Pfam PF00271 Helicase conserved C-terminal domain 578 728 3.2E-6 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 Pfam PF00270 DEAD/DEAH box helicase 307 422 1.8E-15 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 Gene3D G3DSA:3.40.50.300 544 759 2.3E-18 T 28-03-2018 CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 SMART SM00487 266 487 1.1E-10 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS17675 295a3019b51089f95bf662dec6c9d01d 1096 Gene3D G3DSA:3.40.50.300 49 484 6.1E-21 T 28-03-2018 CO704_RS18545 7850e3797b261725acadd792f154faa2 405 SUPERFAMILY SSF90123 300 389 3.79E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18545 7850e3797b261725acadd792f154faa2 405 Pfam PF05992 SbmA/BacA-like family 80 393 9.9E-162 T 28-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CO704_RS18545 7850e3797b261725acadd792f154faa2 405 Gene3D G3DSA:1.20.1560.10 68 284 2.6E-14 T 28-03-2018 CO704_RS18545 7850e3797b261725acadd792f154faa2 405 Gene3D G3DSA:1.20.1560.10 297 399 5.3E-4 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 SUPERFAMILY SSF53067 131 300 1.63E-41 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 SUPERFAMILY SSF53067 7 128 2.55E-36 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 Gene3D G3DSA:3.30.420.150 121 299 2.9E-33 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 PIRSF PIRSF001267 1 494 1.6E-181 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 54.549 T 28-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 5.7E-100 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 Gene3D G3DSA:1.10.3210.10 327 485 1.5E-4 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 SUPERFAMILY SSF109604 308 493 4.5E-44 T 28-03-2018 CO704_RS23370 23af1d00ff1a0b5624f385cbd9157b45 494 Gene3D G3DSA:3.30.420.40 2 120 4.9E-39 T 28-03-2018 CO704_RS07270 0ff79e0c89ead82fc07cae28d0b60568 376 Gene3D G3DSA:3.40.50.1980 19 164 1.2E-20 T 28-03-2018 CO704_RS07270 0ff79e0c89ead82fc07cae28d0b60568 376 Pfam PF01497 Periplasmic binding protein 71 324 4.7E-25 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS07270 0ff79e0c89ead82fc07cae28d0b60568 376 Gene3D G3DSA:3.40.50.1980 165 353 2.3E-40 T 28-03-2018 CO704_RS07270 0ff79e0c89ead82fc07cae28d0b60568 376 SUPERFAMILY SSF53807 28 347 6.28E-48 T 28-03-2018 CO704_RS18925 59fc69882377aa732425bd6a59bdaf28 874 Pfam PF13166 AAA domain 381 703 2.9E-19 T 28-03-2018 IPR026866 Protein CR006, P-loop domain CO704_RS18925 59fc69882377aa732425bd6a59bdaf28 874 Gene3D G3DSA:3.40.50.300 73 700 3.4E-24 T 28-03-2018 CO704_RS18925 59fc69882377aa732425bd6a59bdaf28 874 SUPERFAMILY SSF52540 573 695 4.04E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18925 59fc69882377aa732425bd6a59bdaf28 874 SUPERFAMILY SSF52540 512 533 4.04E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18925 59fc69882377aa732425bd6a59bdaf28 874 SUPERFAMILY SSF52540 85 229 4.04E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 Pfam PF01467 Cytidylyltransferase-like 345 439 5.0E-14 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.3E-126 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 SUPERFAMILY SSF53613 12 310 2.18E-59 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 4.3E-65 T 28-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 SUPERFAMILY SSF52374 341 471 2.0E-22 T 28-03-2018 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 Gene3D G3DSA:3.40.1190.20 2 310 1.6E-60 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 Gene3D G3DSA:3.40.50.620 321 475 1.1E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.152 T 28-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CO704_RS20265 c50f52553cb7382f9541cedf2270c4ce 475 Pfam PF00294 pfkB family carbohydrate kinase 12 305 1.8E-56 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS02330 aa9f23f39ed97810dbbc5fc2a6a8c39f 275 SUPERFAMILY SSF161098 75 258 3.53E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02330 aa9f23f39ed97810dbbc5fc2a6a8c39f 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 267 1.2E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02330 aa9f23f39ed97810dbbc5fc2a6a8c39f 275 Gene3D G3DSA:1.10.3720.10 21 273 1.0E-32 T 28-03-2018 CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 6.6E-50 T 28-03-2018 IPR023214 HAD-like domain CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 1.2E-41 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 274 62.129 T 28-03-2018 IPR023938 HMP-PP phosphatase GO:0016818 CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 Gene3D G3DSA:3.40.50.1000 1 268 4.5E-30 T 28-03-2018 IPR023214 HAD-like domain CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 SUPERFAMILY SSF56784 1 263 1.08E-57 T 28-03-2018 IPR023214 HAD-like domain CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 28-03-2018 CO704_RS18135 3cf4018ea0edb89eafba2a8e22d404a9 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 3.2E-53 T 28-03-2018 IPR000150 Cof family GO:0016787 CO704_RS05730 9869d1049ca8c7ad055854783ccd80ad 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 1.3E-78 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CO704_RS05730 9869d1049ca8c7ad055854783ccd80ad 200 SUPERFAMILY SSF48695 17 196 6.41E-64 T 28-03-2018 IPR011031 Multihaem cytochrome CO704_RS05730 9869d1049ca8c7ad055854783ccd80ad 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 1.3E-103 T 28-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CO704_RS05730 9869d1049ca8c7ad055854783ccd80ad 200 Gene3D G3DSA:1.10.468.10 57 198 4.3E-28 T 28-03-2018 CO704_RS05730 9869d1049ca8c7ad055854783ccd80ad 200 PIRSF PIRSF000013 1 200 3.9E-107 T 28-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 Gene3D G3DSA:1.10.10.60 165 248 5.9E-12 T 28-03-2018 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 SMART SM00342 208 291 6.7E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 Pfam PF12833 Helix-turn-helix domain 214 287 3.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 Gene3D G3DSA:1.10.10.60 249 300 9.2E-13 T 28-03-2018 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 SUPERFAMILY SSF46689 192 242 7.37E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 SUPERFAMILY SSF46689 245 296 3.36E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03165 6a079bca2ecd13ddb9a1370678619465 313 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 179 4.3E-42 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CO704_RS02450 e3839fbc606e931fa9c5f698796d8aa3 141 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 3.4E-42 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.4E-98 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 4 409 38.095 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 382 8.3E-126 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.9E-29 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.9E-29 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.9E-29 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.9E-29 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS05950 cf70e6419d7e9ceb878155c589605576 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.9E-29 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 55 0.026 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SMART SM01086 780 873 1.6E-9 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 7.7E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 7.7E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 7.7E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 7.7E-33 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Gene3D G3DSA:1.10.8.60 378 559 7.0E-39 T 28-03-2018 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Gene3D G3DSA:3.40.50.300 191 376 8.2E-24 T 28-03-2018 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 1.4E-38 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SUPERFAMILY SSF52540 193 520 5.73E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 237 349 1.6E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 854 7.2E-12 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 859 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SUPERFAMILY SSF81923 12 124 3.66E-20 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SUPERFAMILY SSF52540 558 851 6.77E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 328 340 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Gene3D G3DSA:1.10.1780.10 1 159 6.3E-31 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SMART SM00382 609 780 4.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 SMART SM00382 232 377 5.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Gene3D G3DSA:1.10.8.60 780 881 6.3E-12 T 28-03-2018 CO704_RS12495 dd7dbed7abc50c5d1f3f64a2866ac3b3 883 Gene3D G3DSA:3.40.50.300 564 779 3.2E-35 T 28-03-2018 CO704_RS12625 e18f1b995d1803bc966962762c1edc36 301 SUPERFAMILY SSF53850 26 300 4.78E-60 T 28-03-2018 CO704_RS12625 e18f1b995d1803bc966962762c1edc36 301 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 297 8.0E-65 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS12625 e18f1b995d1803bc966962762c1edc36 301 Gene3D G3DSA:3.40.190.10 15 181 7.9E-26 T 28-03-2018 CO704_RS12625 e18f1b995d1803bc966962762c1edc36 301 Gene3D G3DSA:3.40.190.10 182 299 7.2E-21 T 28-03-2018 CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.2E-37 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 Gene3D G3DSA:1.10.1200.10 1 78 1.0E-27 T 28-03-2018 CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.7E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.906 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CO704_RS14545 25066410c42026ba41740d3ca8f1f791 78 SUPERFAMILY SSF47336 2 77 2.49E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 SUPERFAMILY SSF52172 3 132 5.98E-28 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 Pfam PF00072 Response regulator receiver domain 6 117 1.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 SMART SM00448 4 117 2.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.9E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.9E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.9E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 Gene3D G3DSA:3.40.50.2300 1 120 6.6E-27 T 28-03-2018 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 SMART SM00421 147 204 5.5E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.1E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 Gene3D G3DSA:1.10.10.10 121 210 8.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02375 ad52395214ead961308d0087dc1caaac 210 SUPERFAMILY SSF46894 145 209 4.76E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 Gene3D G3DSA:3.40.190.10 99 188 1.4E-18 T 28-03-2018 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 Pfam PF03466 LysR substrate binding domain 98 300 1.1E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 Gene3D G3DSA:1.10.10.10 4 96 5.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 Gene3D G3DSA:3.40.190.10 189 277 4.9E-16 T 28-03-2018 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 SUPERFAMILY SSF46785 10 119 9.64E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 SUPERFAMILY SSF53850 101 304 3.62E-31 T 28-03-2018 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20250 325fff7fb34fea28a88622073ded4d4b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 PIRSF PIRSF005461 1 209 7.0E-82 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 9.7E-58 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.696 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 SUPERFAMILY SSF53335 31 207 2.95E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.8E-95 T 28-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 CO704_RS01760 1fd7b51844da0a4d8ace8a1e413c5e67 209 Gene3D G3DSA:3.40.50.150 1 209 1.9E-57 T 28-03-2018 CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 8.2E-31 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 SUPERFAMILY SSF142433 250 377 2.35E-5 T 28-03-2018 IPR008136 CinA, C-terminal CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 Gene3D G3DSA:3.40.980.10 1 172 1.2E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 Gene3D G3DSA:3.90.950.20 244 298 9.2E-6 T 28-03-2018 CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 395 1.6E-143 T 28-03-2018 IPR008135 Competence-induced protein CinA CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 PIRSF PIRSF006728 1 383 2.3E-106 T 28-03-2018 IPR008135 Competence-induced protein CinA CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 114.488 T 28-03-2018 IPR008135 Competence-induced protein CinA CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 SMART SM00852 5 172 6.7E-34 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 5.4E-31 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS06670 f0e1d641d0ed827af5d47a675240b732 398 SUPERFAMILY SSF53218 2 203 1.57E-36 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 Gene3D G3DSA:3.40.50.300 578 1108 1.7E-55 T 28-03-2018 CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 9.0E-42 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 Gene3D G3DSA:1.10.10.10 1172 1226 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 Pfam PF01580 FtsK/SpoIIIE family 855 1068 9.6E-72 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 SMART SM00843 1170 1235 2.1E-43 T 28-03-2018 IPR018541 FtsK gamma domain CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 SUPERFAMILY SSF46785 1170 1234 1.36E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 Pfam PF09397 Ftsk gamma domain 1172 1232 9.6E-29 T 28-03-2018 IPR018541 FtsK gamma domain CO704_RS15660 adaccdb3c3eea539f2963812dcf49838 1237 SUPERFAMILY SSF52540 829 1141 4.25E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 29 312 3.3E-91 T 28-03-2018 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 SUPERFAMILY SSF55073 357 500 5.26E-30 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 500 8.6E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 Gene3D G3DSA:3.30.450.20 51 248 4.5E-4 T 28-03-2018 CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 500 1.2E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 Gene3D G3DSA:3.30.70.270 342 503 5.6E-34 T 28-03-2018 CO704_RS10875 38d2e0c5c62a69d83f6a336380b172a2 508 SMART SM00267 341 506 4.2E-28 T 28-03-2018 IPR000160 GGDEF domain CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 Gene3D G3DSA:3.40.50.2000 15 261 7.1E-11 T 28-03-2018 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 5.0E-174 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 Pfam PF08323 Starch synthase catalytic domain 2 234 1.4E-70 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 SUPERFAMILY SSF53756 5 476 2.13E-115 T 28-03-2018 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 Pfam PF00534 Glycosyl transferases group 1 288 438 9.1E-14 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 Gene3D G3DSA:3.40.50.2000 262 472 6.1E-32 T 28-03-2018 CO704_RS00665 d7b598c3eda9b5257e2ee09e5396a833 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.79 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1186 1203 1.1E-4 T 28-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Gene3D G3DSA:2.60.40.10 384 479 5.3E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Pfam PF00207 Alpha-2-macroglobulin family 981 1059 9.1E-6 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 288 381 6.3E-21 T 28-03-2018 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Gene3D G3DSA:1.50.10.20 1170 1472 1.5E-26 T 28-03-2018 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 SUPERFAMILY SSF48239 1180 1436 3.34E-40 T 28-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 SMART SM01359 758 906 1.5E-33 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 PIRSF PIRSF038980 1 1655 0.0 T 28-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Gene3D G3DSA:2.60.40.10 1023 1126 0.002 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Gene3D G3DSA:2.60.40.10 23 360 3.2E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 759 906 1.5E-14 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 SMART SM01360 969 1060 1.8E-18 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Pfam PF01835 MG2 domain 387 478 9.7E-20 T 28-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CO704_RS04960 b3ced2b95d03a0194501c5db059f24bb 1655 Gene3D G3DSA:2.60.40.10 858 1022 0.058 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS05595 0965e2de286ad0b1ad52bec704bd59eb 240 Gene3D G3DSA:3.60.21.10 1 223 2.5E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS05595 0965e2de286ad0b1ad52bec704bd59eb 240 SUPERFAMILY SSF56300 1 218 7.6E-32 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS05595 0965e2de286ad0b1ad52bec704bd59eb 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.9E-113 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CO704_RS05595 0965e2de286ad0b1ad52bec704bd59eb 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 3.5E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS05595 0965e2de286ad0b1ad52bec704bd59eb 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 135.957 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 Gene3D G3DSA:3.40.50.300 1 244 8.3E-31 T 28-03-2018 CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 SMART SM00487 1 185 7.4E-19 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 7.5E-12 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 3.9E-24 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 SUPERFAMILY SSF52540 237 358 3.57E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 SUPERFAMILY SSF52540 50 169 3.57E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 SMART SM00490 262 345 3.8E-9 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 Gene3D G3DSA:3.40.50.300 245 381 5.5E-15 T 28-03-2018 CO704_RS06805 415de557d8ef7d4f6d3cbedec72e233f 586 SUPERFAMILY SSF57829 422 467 4.58E-8 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CO704_RS22040 5a476a0c5fcd593ef2e1f65bd94ae041 153 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 3.5E-21 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CO704_RS22040 5a476a0c5fcd593ef2e1f65bd94ae041 153 Gene3D G3DSA:3.10.450.40 7 133 1.4E-14 T 28-03-2018 CO704_RS22040 5a476a0c5fcd593ef2e1f65bd94ae041 153 SUPERFAMILY SSF160719 33 122 4.71E-17 T 28-03-2018 CO704_RS22040 5a476a0c5fcd593ef2e1f65bd94ae041 153 Pfam PF04965 Gene 25-like lysozyme 35 116 4.5E-10 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 Gene3D G3DSA:3.40.50.300 3 257 6.9E-75 T 28-03-2018 CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 SUPERFAMILY SSF50331 250 367 2.44E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 Pfam PF08402 TOBE domain 292 372 1.8E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 7.2E-164 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 Pfam PF00005 ABC transporter 34 174 9.7E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 SUPERFAMILY SSF52540 18 257 1.82E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS14360 ec444cea2660c7bf169e5b6b2a0db27e 378 SMART SM00382 42 225 5.8E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10780 017eff420be5115500a4613b44adad36 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.9E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10780 017eff420be5115500a4613b44adad36 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.9E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10780 017eff420be5115500a4613b44adad36 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 5.9E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10780 017eff420be5115500a4613b44adad36 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.9E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10780 017eff420be5115500a4613b44adad36 278 SUPERFAMILY SSF51735 165 270 1.53E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10780 017eff420be5115500a4613b44adad36 278 SUPERFAMILY SSF51735 6 134 1.53E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10780 017eff420be5115500a4613b44adad36 278 Gene3D G3DSA:3.40.50.720 3 272 1.0E-27 T 28-03-2018 CO704_RS10780 017eff420be5115500a4613b44adad36 278 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 134 1.0E-7 T 28-03-2018 CO704_RS10780 017eff420be5115500a4613b44adad36 278 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 168 268 7.8E-17 T 28-03-2018 CO704_RS17410 308bf8533daf7b2462f021a214cc37cd 317 SUPERFAMILY SSF46894 7 102 4.54E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS17410 308bf8533daf7b2462f021a214cc37cd 317 Gene3D G3DSA:1.10.10.10 2 108 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17410 308bf8533daf7b2462f021a214cc37cd 317 SMART SM00862 26 101 1.4E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS17410 308bf8533daf7b2462f021a214cc37cd 317 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 101 1.3E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Pfam PF00890 FAD binding domain 9 405 2.2E-117 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.4E-5 T 28-03-2018 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-5 T 28-03-2018 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.6E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 SUPERFAMILY SSF51905 4 259 4.76E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 SUPERFAMILY SSF51905 359 442 4.76E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.8E-276 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 SUPERFAMILY SSF46977 452 588 1.01E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Gene3D G3DSA:4.10.80.40 541 588 5.2E-12 T 28-03-2018 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.1E-240 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 PIRSF PIRSF000171 1 579 6.4E-46 T 28-03-2018 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Gene3D G3DSA:3.50.50.60 302 430 2.5E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Gene3D G3DSA:3.50.50.60 3 294 2.7E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS16685 1b03b68159a162b547ad4ccbf69da707 588 Gene3D G3DSA:1.20.58.100 431 540 6.1E-37 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 SMART SM00347 34 129 8.7E-21 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 Pfam PF01047 MarR family 41 99 1.0E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 SUPERFAMILY SSF46785 8 147 9.72E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.3E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS20230 86cd74bf9ae7b6ac5d9f19afd99a99af 148 Gene3D G3DSA:1.10.10.10 1 148 1.3E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21460 700761310404bc261d36b479051a2a6f 228 Pfam PF08448 PAS fold 19 125 3.5E-9 T 28-03-2018 IPR013656 PAS fold-4 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 202 2.0E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 Gene3D G3DSA:1.10.10.10 51 213 6.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21460 700761310404bc261d36b479051a2a6f 228 SUPERFAMILY SSF46894 153 210 3.2E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 9.7E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 9.7E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 9.7E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21460 700761310404bc261d36b479051a2a6f 228 SMART SM00421 153 205 9.9E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 SUPERFAMILY SSF53927 21 273 8.72E-80 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 Gene3D G3DSA:3.40.140.10 142 274 4.1E-43 T 28-03-2018 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 PIRSF PIRSF015626 5 274 6.1E-79 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 Gene3D G3DSA:3.10.20.10 40 126 3.3E-22 T 28-03-2018 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 274 32.97 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 Pfam PF02634 FdhD/NarQ family 38 273 1.6E-69 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CO704_RS00170 7d442889e247b548ad21ac78a66f154e 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 5.7E-88 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CO704_RS03475 0538375b718811877a502b54d0279f3b 394 Pfam PF00155 Aminotransferase class I and II 55 390 2.6E-39 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS03475 0538375b718811877a502b54d0279f3b 394 Gene3D G3DSA:3.90.1150.10 274 394 4.4E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS03475 0538375b718811877a502b54d0279f3b 394 Gene3D G3DSA:3.40.640.10 56 273 9.3E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS03475 0538375b718811877a502b54d0279f3b 394 SUPERFAMILY SSF53383 5 394 9.04E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS15475 f665dd41a0f19b77c2bd1cb2ebb597a4 256 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15475 f665dd41a0f19b77c2bd1cb2ebb597a4 256 Gene3D G3DSA:3.40.50.300 9 218 6.9E-58 T 28-03-2018 CO704_RS15475 f665dd41a0f19b77c2bd1cb2ebb597a4 256 SUPERFAMILY SSF52540 12 212 2.02E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15475 f665dd41a0f19b77c2bd1cb2ebb597a4 256 SMART SM00382 36 210 4.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15475 f665dd41a0f19b77c2bd1cb2ebb597a4 256 Pfam PF00005 ABC transporter 27 160 1.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 PIRSF PIRSF005917 1 288 1.7E-106 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 Gene3D G3DSA:3.30.950.10 122 237 3.3E-41 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 5.0E-29 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 SUPERFAMILY SSF53790 13 232 3.93E-83 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.621 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 8.9E-113 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 Gene3D G3DSA:3.40.1010.10 11 121 8.9E-44 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CO704_RS21145 15862307b9e0bc4f0fb5824074e36d32 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 2.1E-95 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 Gene3D G3DSA:2.40.230.20 26 292 1.7E-75 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 292 5.3E-81 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CO704_RS18325 de13e81c44798818abfd5ef8f5709f7f 292 SUPERFAMILY SSF111364 32 292 1.44E-85 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Gene3D G3DSA:3.30.390.10 346 382 0.0043 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 SMART SM00922 125 230 3.0E-17 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.631 T 28-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 SUPERFAMILY SSF51604 95 357 2.88E-72 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 SUPERFAMILY SSF54826 1 112 2.31E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 8.4E-30 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 3.5E-53 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Gene3D G3DSA:3.20.20.120 98 345 1.5E-65 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS24740 d6ff7326a44fb67f8b2673950f64798d 382 Gene3D G3DSA:3.30.390.10 1 97 1.9E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS05410 658057233fe82d0528d9f494c04d7641 289 Pfam PF05726 Pirin C-terminal cupin domain 184 285 1.5E-31 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CO704_RS05410 658057233fe82d0528d9f494c04d7641 289 Gene3D G3DSA:2.60.120.10 1 258 3.2E-84 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS05410 658057233fe82d0528d9f494c04d7641 289 PIRSF PIRSF006232 3 289 7.9E-94 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CO704_RS05410 658057233fe82d0528d9f494c04d7641 289 SUPERFAMILY SSF51182 4 286 7.21E-88 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS05410 658057233fe82d0528d9f494c04d7641 289 Pfam PF02678 Pirin 22 128 3.4E-35 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CO704_RS01715 dbf0b0890021342b297755d5e166e8c9 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 8.4E-45 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01715 dbf0b0890021342b297755d5e166e8c9 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.8E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01715 dbf0b0890021342b297755d5e166e8c9 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01715 dbf0b0890021342b297755d5e166e8c9 103 SUPERFAMILY SSF141091 1 102 1.06E-36 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01715 dbf0b0890021342b297755d5e166e8c9 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.541 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 PRINTS PR00762 Chloride channel signature 116 135 7.6E-22 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 PRINTS PR00762 Chloride channel signature 364 380 7.6E-22 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 PRINTS PR00762 Chloride channel signature 330 350 7.6E-22 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 PRINTS PR00762 Chloride channel signature 382 401 7.6E-22 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 PRINTS PR00762 Chloride channel signature 166 185 7.6E-22 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 Pfam PF00654 Voltage gated chloride channel 72 415 1.4E-74 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 SUPERFAMILY SSF81340 5 424 1.83E-87 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS12640 1c836428b682745ae714c30e4653c9da 430 Gene3D G3DSA:1.10.3080.10 5 427 1.2E-77 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 Gene3D G3DSA:1.10.3880.10 2 89 4.4E-39 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 4.0E-35 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.1E-39 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.442 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 PIRSF PIRSF029827 1 90 1.8E-43 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS02740 5083a44f0edf24088333d46377591ffc 91 SUPERFAMILY SSF111148 1 90 4.45E-39 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 Gene3D G3DSA:3.40.50.620 194 514 1.0E-90 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 PIRSF PIRSF001589 363 512 7.3E-29 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 PIRSF PIRSF001589 1 367 6.6E-111 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.1E-41 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 Pfam PF00733 Asparagine synthase 212 366 8.3E-60 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.8E-125 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 SUPERFAMILY SSF52402 210 480 2.88E-76 T 28-03-2018 CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 Gene3D G3DSA:3.60.20.10 2 193 3.1E-48 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS17115 0c0608405401d147f9bf62bb440685c3 553 SUPERFAMILY SSF56235 1 196 2.66E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 SUPERFAMILY SSF52980 899 1174 3.16E-91 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 437 5.6E-60 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 442 808 1.8E-14 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1172 0.0 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Pfam PF12705 PD-(D/E)XK nuclease superfamily 952 1147 1.9E-4 T 28-03-2018 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Gene3D G3DSA:3.40.50.300 625 884 3.1E-27 T 28-03-2018 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Gene3D G3DSA:3.40.50.300 444 593 2.0E-20 T 28-03-2018 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Gene3D G3DSA:1.10.3170.10 156 349 1.2E-58 T 28-03-2018 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1173 23.021 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 SUPERFAMILY SSF52540 119 203 9.1E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 SUPERFAMILY SSF52540 18 81 9.1E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 SUPERFAMILY SSF52540 325 820 9.1E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03395 28d501f8cd4d67df41a9bdfcdcb3982d 1181 Gene3D G3DSA:3.90.320.10 889 1180 1.5E-84 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 Gene3D G3DSA:1.10.10.10 1 86 4.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 Gene3D G3DSA:3.40.190.10 177 265 9.4E-24 T 28-03-2018 CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 SUPERFAMILY SSF53850 88 298 2.71E-38 T 28-03-2018 CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 Pfam PF03466 LysR substrate binding domain 88 294 4.3E-38 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 SUPERFAMILY SSF46785 2 111 6.17E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07905 c4ba224cd41d5d7be9f624094fe23a6f 306 Gene3D G3DSA:3.40.190.10 88 176 2.2E-13 T 28-03-2018 CO704_RS22795 1ed19b7a2f9a563a6bac0aa7dc600f89 580 PIRSF PIRSF000719 1 575 1.0E-282 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CO704_RS22795 1ed19b7a2f9a563a6bac0aa7dc600f89 580 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.1E-243 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CO704_RS22795 1ed19b7a2f9a563a6bac0aa7dc600f89 580 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CO704_RS22795 1ed19b7a2f9a563a6bac0aa7dc600f89 580 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 42.948 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CO704_RS08660 47c73604de8d708b91dd394436e68956 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 276 7.9E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08660 47c73604de8d708b91dd394436e68956 281 Gene3D G3DSA:1.10.3720.10 8 267 3.1E-45 T 28-03-2018 CO704_RS08660 47c73604de8d708b91dd394436e68956 281 SUPERFAMILY SSF161098 74 260 1.03E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 Gene3D G3DSA:1.10.287.950 325 521 8.9E-44 T 28-03-2018 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 Gene3D G3DSA:1.10.287.950 75 324 9.2E-15 T 28-03-2018 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 SUPERFAMILY SSF58104 241 519 5.75E-62 T 28-03-2018 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 SMART SM00283 271 518 2.1E-75 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 484 2.6E-48 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 179 2.2E-13 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 17 42 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03745 37b6e4294ab6d8dde92e868f4a9d2b7f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 8.5E-49 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 1.6E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 1.6E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 SUPERFAMILY SSF53383 99 460 3.34E-81 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 88 2.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 SUPERFAMILY SSF46785 21 91 3.74E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 Gene3D G3DSA:3.90.1150.10 369 462 1.0E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 SMART SM00345 31 90 4.4E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 Pfam PF00155 Aminotransferase class I and II 144 455 5.0E-31 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 Gene3D G3DSA:3.40.640.10 120 368 8.0E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS18045 497ce634fa2e8fd59ab590183d25f30a 475 Gene3D G3DSA:1.10.10.10 16 90 2.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 Gene3D G3DSA:3.40.50.1820 1 496 2.2E-119 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 Pfam PF00135 Carboxylesterase family 3 322 9.4E-88 T 28-03-2018 IPR002018 Carboxylesterase, type B CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 Pfam PF00135 Carboxylesterase family 351 473 2.4E-10 T 28-03-2018 IPR002018 Carboxylesterase, type B CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 SUPERFAMILY SSF53474 4 495 1.53E-108 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 180 195 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 PRINTS PR00878 Cholinesterase signature 105 134 4.3E-5 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 PRINTS PR00878 Cholinesterase signature 398 410 4.3E-5 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CO704_RS13155 c00ddf6ffc02677beb825f3a2f51481e 500 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 80 90 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.25 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 6.4E-24 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 Gene3D G3DSA:2.30.30.30 2 93 9.8E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 Pfam PF00467 KOW motif 8 37 7.7E-5 T 28-03-2018 IPR005824 KOW CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 SMART SM00739 4 31 9.8E-4 T 28-03-2018 IPR005824 KOW CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 SUPERFAMILY SSF50104 4 100 2.47E-33 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01150 bb3468211b6f25ca922c63db77f73e1b 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.2E-40 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 8.6E-133 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 SUPERFAMILY SSF56655 1 325 1.59E-111 T 28-03-2018 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 PIRSF PIRSF004532 1 333 2.3E-141 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 332 3.1E-181 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 Gene3D G3DSA:3.30.540.10 1 148 3.1E-59 T 28-03-2018 CO704_RS23630 fc7744ff96524912f55904f7a009cc58 336 Gene3D G3DSA:3.30.540.10 152 336 2.9E-55 T 28-03-2018 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Gene3D G3DSA:3.40.50.720 291 380 0.28 T 28-03-2018 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Gene3D G3DSA:1.10.1040.10 386 473 2.7E-14 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Gene3D G3DSA:1.10.1040.10 187 290 6.1E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Gene3D G3DSA:3.40.50.720 3 186 2.9E-52 T 28-03-2018 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 386 465 3.3E-12 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 1.8E-26 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 SUPERFAMILY SSF48179 187 288 1.45E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 SUPERFAMILY SSF51735 8 187 3.95E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 SUPERFAMILY SSF48179 385 466 3.06E-16 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS11785 6a18d1bb6658772795b3c706050e0c6d 474 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 184 3.7E-63 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 3.7E-163 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 2.1E-71 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 PRINTS PR00045 Sigma-54 factor signature 186 203 8.8E-32 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 PRINTS PR00045 Sigma-54 factor signature 376 388 8.8E-32 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 PRINTS PR00045 Sigma-54 factor signature 450 468 8.8E-32 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 PRINTS PR00045 Sigma-54 factor signature 392 403 8.8E-32 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.6E-15 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 Gene3D G3DSA:1.10.10.10 322 413 3.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 8.8E-61 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CO704_RS01630 faee03bcd050f5aac9369aa3c334bb48 477 PIRSF PIRSF000774 1 477 5.3E-152 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS15140 6d75e1dd70ea2d0284a43a3f7ee5e318 260 Gene3D G3DSA:3.60.15.10 1 260 1.2E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15140 6d75e1dd70ea2d0284a43a3f7ee5e318 260 Pfam PF00753 Metallo-beta-lactamase superfamily 34 244 1.2E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15140 6d75e1dd70ea2d0284a43a3f7ee5e318 260 SUPERFAMILY SSF56281 35 248 2.1E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15140 6d75e1dd70ea2d0284a43a3f7ee5e318 260 SMART SM00849 34 244 6.7E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS11625 82e0f175e4649476ef1ee0eab0a53496 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 279 6.4E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11625 82e0f175e4649476ef1ee0eab0a53496 291 SUPERFAMILY SSF161098 51 277 3.27E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11625 82e0f175e4649476ef1ee0eab0a53496 291 Gene3D G3DSA:1.10.3720.10 7 291 2.1E-45 T 28-03-2018 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.1E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.1E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.1E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.1E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.1E-38 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 SMART SM00562 3 140 2.5E-85 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 7.6E-54 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 SUPERFAMILY SSF54919 1 141 9.95E-59 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.285 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS04970 51aa76ff053aad4da9279d0375df0692 143 Gene3D G3DSA:3.30.70.141 2 142 4.0E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.4E-21 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 Pfam PF07670 Nucleoside recognition 353 443 5.0E-13 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 Pfam PF07670 Nucleoside recognition 512 689 3.1E-36 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 SUPERFAMILY SSF52540 4 171 1.63E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 5.5E-239 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 Gene3D G3DSA:3.40.50.300 1 269 2.8E-36 T 28-03-2018 CO704_RS00735 ee907e4d709bb4c1fe5cfa497f9806b8 772 Pfam PF02421 Ferrous iron transport protein B 5 162 6.3E-64 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 PIRSF PIRSF039144 1 112 9.8E-53 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 SMART SM00938 4 105 5.0E-61 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 83 103 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 2 17 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 52 75 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 23 41 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CO704_RS18110 cf694437af3ddb7049c669fc92e59b16 112 Gene3D G3DSA:3.30.70.120 1 108 1.1E-45 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 Pfam PF01938 TRAM domain 13 66 1.2E-13 T 28-03-2018 IPR002792 TRAM domain CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 437 63.721 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 419 429 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 Gene3D G3DSA:3.40.50.150 83 435 3.9E-50 T 28-03-2018 CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 SUPERFAMILY SSF50249 3 66 3.37E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 368 398 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 429 6.8E-144 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 265 436 3.1E-25 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 Gene3D G3DSA:2.40.50.140 1 82 4.2E-30 T 28-03-2018 CO704_RS03540 fa4eeaeac59f58a1e5214e56ad331928 437 SUPERFAMILY SSF53335 75 436 8.51E-84 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 Pfam PF13245 AAA domain 12 226 6.5E-12 T 28-03-2018 CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 Pfam PF13361 UvrD-like helicase C-terminal domain 326 459 3.2E-11 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 SUPERFAMILY SSF52540 6 100 3.22E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 SUPERFAMILY SSF52540 143 463 3.22E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 Gene3D G3DSA:3.40.50.300 2 242 1.0E-23 T 28-03-2018 CO704_RS21445 ba1bc1b4a2575a7d48115f1fe8bcda87 494 Gene3D G3DSA:3.40.50.300 245 464 1.2E-15 T 28-03-2018 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Gene3D G3DSA:3.40.50.970 1 185 1.4E-61 T 28-03-2018 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 2.6E-215 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 SUPERFAMILY SSF52467 181 342 1.17E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 1.3E-41 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 SUPERFAMILY SSF52518 357 546 4.83E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 SUPERFAMILY SSF52518 1 171 2.64E-62 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.8E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Gene3D G3DSA:3.40.50.970 334 535 2.4E-50 T 28-03-2018 CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Gene3D G3DSA:3.40.50.1220 186 333 2.6E-47 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS23425 5c22995d5ac4110bc09a6952f5c3954a 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 1.4E-56 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 Gene3D G3DSA:3.40.470.10 1 228 9.7E-103 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.5E-24 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 SUPERFAMILY SSF52141 3 220 6.54E-94 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 SMART SM00987 49 210 8.7E-42 T 28-03-2018 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 SMART SM00986 49 210 8.7E-42 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.904 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS04535 4ccee1769b884f1c1e703c1a350b750e 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.0E-87 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.2E-92 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 2.9E-87 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 SUPERFAMILY SSF51569 3 209 2.56E-69 T 28-03-2018 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS08945 00d48367ed5ab42301dbb64c655579d2 213 Gene3D G3DSA:3.20.20.70 1 213 2.6E-32 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 Gene3D G3DSA:1.20.1640.10 390 607 3.0E-29 T 28-03-2018 CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 3.1E-38 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 Pfam PF07549 SecD/SecF GG Motif 116 140 5.5E-7 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 SUPERFAMILY SSF82866 410 606 2.62E-39 T 28-03-2018 CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 2.7E-84 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 Pfam PF02355 Protein export membrane protein 433 601 6.1E-15 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.85 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CO704_RS18345 138cba03524b4b6bf8bf12caf96261bd 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 1.4E-151 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 SMART SM00947 27 193 2.4E-64 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 SUPERFAMILY SSF53056 1 202 9.94E-65 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 Gene3D G3DSA:3.40.1050.10 1 208 1.0E-65 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 Pfam PF00484 Carbonic anhydrase 34 189 1.1E-47 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS09470 cc60f96ae79c200f03bdad8483837aa4 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 Pfam PF13481 AAA domain 88 225 8.1E-15 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.185 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 SUPERFAMILY SSF52540 71 291 1.3E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 SUPERFAMILY SSF54211 296 457 2.54E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 SMART SM00382 94 248 8.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 Gene3D G3DSA:3.40.50.300 76 286 9.1E-40 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 Gene3D G3DSA:3.30.230.10 289 457 1.7E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.8E-9 T 28-03-2018 CO704_RS20065 7ace067862eab02b114b45d8452c8e94 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 4.6E-236 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CO704_RS08525 8d677f81e149dd9badeae64cbc628fa1 181 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 165 5.1E-78 T 28-03-2018 IPR022523 Flagellar regulator, FliZ CO704_RS08525 8d677f81e149dd9badeae64cbc628fa1 181 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 165 2.7E-13 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CO704_RS08525 8d677f81e149dd9badeae64cbc628fa1 181 Gene3D G3DSA:1.10.150.130 89 179 0.0016 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS05170 acac29ae44f2d7645b16805269fe8724 208 SUPERFAMILY SSF53271 4 206 2.36E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS05170 acac29ae44f2d7645b16805269fe8724 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.4E-90 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CO704_RS05170 acac29ae44f2d7645b16805269fe8724 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.458 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CO704_RS05170 acac29ae44f2d7645b16805269fe8724 208 Gene3D G3DSA:3.40.50.2020 1 206 1.5E-59 T 28-03-2018 CO704_RS05170 acac29ae44f2d7645b16805269fe8724 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.8E-64 T 28-03-2018 CO704_RS05360 39bd1a024e7f7f29451ab7f1c0d7cc16 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 293 7.8E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS05360 39bd1a024e7f7f29451ab7f1c0d7cc16 399 SUPERFAMILY SSF111369 52 300 5.49E-88 T 28-03-2018 CO704_RS05360 39bd1a024e7f7f29451ab7f1c0d7cc16 399 Gene3D G3DSA:1.20.1600.10 24 345 7.5E-37 T 28-03-2018 CO704_RS05360 39bd1a024e7f7f29451ab7f1c0d7cc16 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 3.1E-10 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS05360 39bd1a024e7f7f29451ab7f1c0d7cc16 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 5.6E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS01105 810b7bd3fa1e7044816eb85264852268 100 Gene3D G3DSA:3.30.70.330 6 100 3.7E-30 T 28-03-2018 CO704_RS01105 810b7bd3fa1e7044816eb85264852268 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01105 810b7bd3fa1e7044816eb85264852268 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.075 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CO704_RS01105 810b7bd3fa1e7044816eb85264852268 100 Pfam PF00276 Ribosomal protein L23 9 95 3.4E-30 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CO704_RS01105 810b7bd3fa1e7044816eb85264852268 100 SUPERFAMILY SSF54189 6 97 8.63E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 Gene3D G3DSA:3.40.50.1110 16 351 3.5E-48 T 28-03-2018 CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 30 342 7.3E-9 T 28-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 Pfam PF03797 Autotransporter beta-domain 389 635 4.1E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 SMART SM00869 386 647 1.3E-30 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 Gene3D G3DSA:2.40.128.130 352 658 1.5E-37 T 28-03-2018 CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 SUPERFAMILY SSF52266 208 225 9.47E-8 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 SUPERFAMILY SSF52266 312 346 9.47E-8 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 SUPERFAMILY SSF52266 29 169 9.47E-8 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 SUPERFAMILY SSF103515 367 658 3.14E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS07125 efecd78fde443f61dc6ffabfa5ae5965 658 PIRSF PIRSF037375 2 658 1.5E-207 T 28-03-2018 IPR017186 Lipase, autotransporter EstA CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 SMART SM00319 44 182 4.9E-11 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Gene3D G3DSA:1.10.287.950 328 520 2.5E-49 T 28-03-2018 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Gene3D G3DSA:1.20.120.30 23 190 1.2E-30 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.8E-77 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 SUPERFAMILY SSF47170 26 181 3.27E-39 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Pfam PF00672 HAMP domain 221 263 3.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 SMART SM00283 269 516 4.5E-97 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Gene3D G3DSA:1.10.287.1060 225 327 0.055 T 28-03-2018 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Pfam PF02203 Tar ligand binding domain homologue 1 174 8.1E-39 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 SMART SM00304 216 268 2.6E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 SUPERFAMILY SSF58104 236 517 1.57E-74 T 28-03-2018 CO704_RS20820 ba7dde5e2a734f555548ddf2c25f1e4e 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.3E-57 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 Gene3D G3DSA:3.40.50.920 176 317 1.9E-38 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 Pfam PF02779 Transketolase, pyrimidine binding domain 12 164 4.3E-21 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 SUPERFAMILY SSF52518 11 175 1.71E-34 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 SUPERFAMILY SSF52922 185 317 4.19E-36 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 Gene3D G3DSA:3.40.50.970 1 175 7.4E-32 T 28-03-2018 CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 9.6E-32 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CO704_RS06490 3edf391877a6561b9b34a7f82626d9a9 317 SMART SM00861 13 179 4.4E-22 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS20565 8e472621e29d6108a2d59e79bc4bdeb4 277 Gene3D G3DSA:1.10.3720.10 5 266 1.6E-42 T 28-03-2018 CO704_RS20565 8e472621e29d6108a2d59e79bc4bdeb4 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 53 5.2E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS20565 8e472621e29d6108a2d59e79bc4bdeb4 277 SUPERFAMILY SSF161098 71 256 4.84E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20565 8e472621e29d6108a2d59e79bc4bdeb4 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 1.9E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Gene3D G3DSA:1.10.10.60 223 288 2.9E-9 T 28-03-2018 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 SUPERFAMILY SSF46955 3 69 1.19E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Pfam PF00665 Integrase core domain 310 430 5.9E-13 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Gene3D G3DSA:3.30.420.10 295 535 4.0E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 SUPERFAMILY SSF53098 306 519 2.91E-46 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Gene3D G3DSA:2.30.30.130 537 602 6.5E-16 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 SUPERFAMILY SSF50610 529 604 1.1E-19 T 28-03-2018 IPR009004 Transposase, Mu, C-terminal CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Gene3D G3DSA:1.10.10.10 1 68 2.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Pfam PF02316 Mu DNA-binding domain 7 74 1.0E-5 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Pfam PF09299 Mu transposase, C-terminal 542 599 5.2E-12 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CO704_RS12210 31e87045da96f919cacad1f27ffc6b1b 687 Gene3D G3DSA:1.10.10.60 101 208 9.5E-4 T 28-03-2018 CO704_RS20530 91f12ba208a11b641f96c1951a831218 454 Pfam PF03390 2-hydroxycarboxylate transporter family 36 446 1.3E-138 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CO704_RS20530 91f12ba208a11b641f96c1951a831218 454 PIRSF PIRSF005348 16 453 9.5E-155 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 Gene3D G3DSA:3.40.449.10 22 226 2.5E-77 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 PIRSF PIRSF006294 3 539 1.5E-231 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 SUPERFAMILY SSF68923 8 226 4.01E-91 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 5.6E-210 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 SUPERFAMILY SSF53795 228 539 1.65E-128 T 28-03-2018 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 Gene3D G3DSA:3.90.228.20 307 537 2.7E-93 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 Gene3D G3DSA:3.90.228.20 227 306 1.3E-27 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.678 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CO704_RS00765 a62a8a6f828fcc750ace2943822f6e11 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 1.2E-289 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CO704_RS05050 f4a9f414d1f22e4d69df30f0983be938 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 71 3.4E-34 T 28-03-2018 CO704_RS05050 f4a9f414d1f22e4d69df30f0983be938 85 Gene3D G3DSA:1.10.260.40 1 71 1.2E-13 T 28-03-2018 CO704_RS05050 f4a9f414d1f22e4d69df30f0983be938 85 SUPERFAMILY SSF47413 3 68 3.82E-28 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 SUPERFAMILY SSF53955 105 255 4.94E-41 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Gene3D G3DSA:1.10.530.10 17 252 9.0E-33 T 28-03-2018 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Pfam PF01464 Transglycosylase SLT domain 108 220 4.0E-28 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 SMART SM00257 405 447 5.8E-12 T 28-03-2018 IPR018392 LysM domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 SMART SM00257 349 392 2.4E-16 T 28-03-2018 IPR018392 LysM domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Gene3D G3DSA:3.10.350.10 343 400 4.0E-15 T 28-03-2018 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Gene3D G3DSA:3.10.350.10 401 456 2.3E-14 T 28-03-2018 CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 SUPERFAMILY SSF54106 404 447 2.22E-10 T 28-03-2018 IPR018392 LysM domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 SUPERFAMILY SSF54106 348 391 3.92E-11 T 28-03-2018 IPR018392 LysM domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Pfam PF01476 LysM domain 406 446 3.5E-10 T 28-03-2018 IPR018392 LysM domain CO704_RS19090 ef61ed178942ba360d91216cc70941b0 456 Pfam PF01476 LysM domain 350 391 1.7E-14 T 28-03-2018 IPR018392 LysM domain CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 1.1E-45 T 28-03-2018 IPR001162 UvrC family homology region CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Pfam PF02151 UvrB/uvrC motif 205 238 2.1E-10 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SMART SM00465 17 98 3.7E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.2E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Gene3D G3DSA:3.40.1440.10 6 101 6.4E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Gene3D G3DSA:1.10.150.20 546 608 7.2E-12 T 28-03-2018 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Gene3D G3DSA:4.10.860.10 182 240 8.6E-16 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SMART SM00278 556 575 0.43 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SMART SM00278 588 607 21.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SUPERFAMILY SSF82771 17 100 4.58E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 1.9E-233 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SUPERFAMILY SSF46600 191 243 4.18E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.121 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 1.7E-8 T 28-03-2018 CO704_RS08570 2f66b74689a1c7f9c6eff7420e60c904 610 SUPERFAMILY SSF47781 521 608 3.81E-17 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 Gene3D G3DSA:3.40.30.10 94 236 1.0E-25 T 28-03-2018 CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 3.0E-14 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 SUPERFAMILY SSF54423 22 80 1.83E-17 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 Pfam PF13098 Thioredoxin-like domain 105 227 5.4E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 Gene3D G3DSA:3.10.450.70 19 79 1.2E-20 T 28-03-2018 CO704_RS03100 75224ad67a493ddfb3ce809e34fdcf01 238 SUPERFAMILY SSF52833 87 230 6.81E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 5.4E-45 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 157 168 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 8 25 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 143 153 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 179 192 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 42 53 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 PRINTS PR00988 Uridine kinase signature 87 102 1.3E-38 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 Gene3D G3DSA:3.40.50.300 4 213 2.2E-55 T 28-03-2018 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.317 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 SUPERFAMILY SSF52540 8 205 4.53E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07415 40faa0afcf1f7675659d388d2d8e030f 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.3E-96 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.90.650.10 426 608 1.5E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.90.650.10 820 994 2.3E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF109736 155 220 1.7E-21 T 28-03-2018 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF56042 431 615 1.38E-53 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF55326 618 816 5.49E-67 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 2.6E-102 T 28-03-2018 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.40.50.880 1038 1294 7.7E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF52317 1035 1293 4.38E-97 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF55326 221 428 6.63E-64 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 4.1E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 828 966 2.9E-16 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.30.1330.10 183 218 2.3E-4 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.30.1330.10 219 425 1.3E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Gene3D G3DSA:3.30.1330.10 612 813 6.1E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF56042 818 1033 2.24E-56 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS04785 8741e268596c1744f0b983022229425c 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.478 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SUPERFAMILY SSF82697 1 151 1.26E-52 T 28-03-2018 CO704_RS04785 8741e268596c1744f0b983022229425c 1295 SMART SM01211 1039 1294 8.3E-157 T 28-03-2018 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 SMART SM00528 87 135 1.7E-25 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 Gene3D G3DSA:4.10.430.10 93 135 1.9E-19 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 Gene3D G3DSA:1.10.287.1050 1 57 1.0E-25 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 PIRSF PIRSF002096 1 135 2.4E-57 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 SUPERFAMILY SSF81273 2 58 5.1E-18 T 28-03-2018 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 SUPERFAMILY SSF81273 93 135 5.89E-12 T 28-03-2018 CO704_RS09840 bb7853215f31394bca994f76a2924389 135 Pfam PF00816 H-NS histone family 32 127 1.9E-20 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 Gene3D G3DSA:1.10.1060.10 107 238 3.8E-30 T 28-03-2018 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 5.0E-10 T 28-03-2018 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 SUPERFAMILY SSF46548 107 235 8.02E-40 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 Gene3D G3DSA:3.10.20.30 1 106 1.6E-32 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.1E-91 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 9.6E-32 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16680 88d1ab896d48b3c54c9eac4234ed01aa 238 SUPERFAMILY SSF54292 1 106 7.19E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 28-03-2018 IPR020845 AMP-binding, conserved site CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 SUPERFAMILY SSF56801 205 712 1.7E-96 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Pfam PF01553 Acyltransferase 22 137 1.1E-17 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Pfam PF00501 AMP-binding enzyme 233 619 2.3E-65 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 SUPERFAMILY SSF69593 2 167 2.09E-18 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 SMART SM00563 30 140 2.2E-28 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Gene3D G3DSA:3.30.300.30 614 718 6.5E-10 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Gene3D G3DSA:3.40.50.980 376 525 3.6E-44 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Gene3D G3DSA:2.30.38.10 526 612 1.3E-13 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Gene3D G3DSA:3.40.1130.10 10 207 2.5E-24 T 28-03-2018 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.654 T 28-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 CO704_RS03315 8e69f4e372d8cc6850503907c7865c32 719 Gene3D G3DSA:3.40.50.980 208 375 1.1E-21 T 28-03-2018 CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 Gene3D G3DSA:3.40.190.10 185 267 5.7E-18 T 28-03-2018 CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 2.9E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 SUPERFAMILY SSF53850 95 295 1.9E-30 T 28-03-2018 CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 Pfam PF03466 LysR substrate binding domain 95 294 2.8E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 Gene3D G3DSA:3.40.190.10 93 184 3.9E-12 T 28-03-2018 CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 SUPERFAMILY SSF46785 7 87 1.36E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21235 2aa9db2dd1f93f9f9250e0b36cf027eb 312 Gene3D G3DSA:1.10.10.10 2 92 1.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00990 0136ccc67aefe3f1499e66987b69234c 338 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 28-03-2018 IPR000952 AB hydrolase 4, conserved site CO704_RS00990 0136ccc67aefe3f1499e66987b69234c 338 Pfam PF00561 alpha/beta hydrolase fold 74 302 1.6E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS00990 0136ccc67aefe3f1499e66987b69234c 338 PIRSF PIRSF005211 14 338 9.3E-106 T 28-03-2018 IPR012020 AB hydrolase 4 family CO704_RS00990 0136ccc67aefe3f1499e66987b69234c 338 Gene3D G3DSA:3.40.50.1820 46 338 4.1E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS00990 0136ccc67aefe3f1499e66987b69234c 338 SUPERFAMILY SSF53474 35 314 1.55E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13625 9117e9b5990dbb45abef8600c5f43ade 78 Gene3D G3DSA:1.20.5.190 22 73 6.0E-16 T 28-03-2018 CO704_RS13625 9117e9b5990dbb45abef8600c5f43ade 78 PIRSF PIRSF002855 1 78 3.1E-29 T 28-03-2018 IPR016367 Murein-lipoprotein CO704_RS13625 9117e9b5990dbb45abef8600c5f43ade 78 SUPERFAMILY SSF58042 24 73 8.63E-23 T 28-03-2018 CO704_RS13625 9117e9b5990dbb45abef8600c5f43ade 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 2.4E-25 T 28-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 6.2E-129 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 PIRSF PIRSF004486 1 312 8.1E-101 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 SUPERFAMILY SSF53335 7 113 5.64E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 SUPERFAMILY SSF53335 213 310 5.64E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 SUPERFAMILY SSF81799 114 213 4.05E-34 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 Pfam PF01795 MraW methylase family 4 310 2.0E-117 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 Gene3D G3DSA:1.10.150.170 112 215 1.7E-35 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS19680 4af9a6490ef2fa088704f313b00d7300 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.402 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 SUPERFAMILY SSF53850 88 293 5.34E-40 T 28-03-2018 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.1E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 SUPERFAMILY SSF46785 14 111 9.49E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 Gene3D G3DSA:3.40.190.10 183 265 5.2E-17 T 28-03-2018 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 Gene3D G3DSA:1.10.10.10 1 92 1.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 Gene3D G3DSA:3.40.190.10 93 182 1.6E-18 T 28-03-2018 CO704_RS07970 2d6533a1a00f4fef3ff80609c4b42f9f 314 Pfam PF03466 LysR substrate binding domain 90 291 1.1E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 Pfam PF07883 Cupin domain 111 178 2.8E-16 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 Gene3D G3DSA:1.10.260.40 5 68 1.1E-16 T 28-03-2018 CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 SUPERFAMILY SSF47413 7 73 2.49E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 Pfam PF01381 Helix-turn-helix 13 66 2.9E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 SUPERFAMILY SSF51182 51 183 2.43E-29 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 SMART SM00530 11 66 1.2E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07865 5f9235ca11435fccb41e8585c9f415e9 185 Gene3D G3DSA:2.60.120.10 69 184 1.9E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS04655 6012dd9ce47b114b4654268ad81d2c86 150 Gene3D G3DSA:1.10.530.40 2 147 1.1E-45 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 CO704_RS04655 6012dd9ce47b114b4654268ad81d2c86 150 Pfam PF00959 Phage lysozyme 32 137 9.5E-19 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CO704_RS04655 6012dd9ce47b114b4654268ad81d2c86 150 SUPERFAMILY SSF53955 4 146 9.21E-49 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1036 1071 4.9E-16 T 28-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 Gene3D G3DSA:2.40.50.140 33 124 2.8E-31 T 28-03-2018 CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 Pfam PF10150 Ribonuclease E/G family 121 391 2.4E-93 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 Hamap MF_00970 Ribonuclease E [rne]. 1 1060 38.901 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 3.7E-171 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 SUPERFAMILY SSF50249 40 124 1.91E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 Pfam PF00575 S1 RNA binding domain 36 118 3.7E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS14595 d1965ea4b7b92d28d5e5e55dac0d6a57 1074 SMART SM00316 37 119 4.8E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 SUPERFAMILY SSF101801 52 126 1.83E-19 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 123 1.3E-20 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 100 1.5E-18 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 71 87 1.5E-18 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 115 1.5E-18 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 54 70 1.5E-18 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 Gene3D G3DSA:2.30.330.10 45 127 9.5E-23 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS17555 5a474c108039910a693640d7be2a2ac2 133 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 52 126 1.8E-27 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Gene3D G3DSA:3.40.50.1700 338 582 3.1E-72 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 249 266 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Gene3D G3DSA:2.60.40.10 583 703 2.7E-32 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 SUPERFAMILY SSF51445 7 53 2.84E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 SUPERFAMILY SSF51445 98 346 2.84E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 347 582 2.0E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Pfam PF14310 Fibronectin type III-like domain 619 689 2.6E-18 T 28-03-2018 IPR026891 Fibronectin type III-like domain CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 SMART SM01217 619 689 2.1E-22 T 28-03-2018 IPR026891 Fibronectin type III-like domain CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Gene3D G3DSA:3.20.20.300 1 337 6.3E-89 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 85 316 2.1E-49 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 PRINTS PR00133 Glycosyl hydrolase family 3 signature 249 267 7.4E-8 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 PRINTS PR00133 Glycosyl hydrolase family 3 signature 34 50 7.4E-8 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS10295 d950a1b9bc919a30c473985e0fe6ea91 782 SUPERFAMILY SSF52279 347 585 3.4E-49 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 SMART SM00967 120 195 3.5E-9 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 121 192 7.1E-13 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 Pfam PF00588 SpoU rRNA Methylase family 210 347 2.2E-31 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 Gene3D G3DSA:3.30.1330.30 107 190 4.0E-9 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 SUPERFAMILY SSF55315 113 190 3.88E-10 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 SUPERFAMILY SSF75217 200 354 9.16E-38 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 PIRSF PIRSF006280 1 356 2.5E-153 T 28-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CO704_RS04530 ccbce9041656e21740d48d3542c0018a 356 Gene3D G3DSA:3.40.1280.10 198 356 9.8E-37 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 246 2.5E-14 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 Gene3D G3DSA:3.40.50.300 10 317 8.8E-54 T 28-03-2018 CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 SUPERFAMILY SSF52540 10 316 3.68E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 PIRSF PIRSF000545 2 317 6.0E-148 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 317 7.9E-175 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CO704_RS23000 48c624854b69cae62ce4c14c64c28aad 317 Hamap MF_00215 Pantothenate kinase [coaA]. 1 317 188.092 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 Gene3D G3DSA:3.40.50.450 1 212 8.9E-83 T 28-03-2018 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PIRSF PIRSF000532 1 320 1.7E-130 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 Pfam PF00365 Phosphofructokinase 4 276 9.8E-106 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.7E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 Gene3D G3DSA:3.40.50.450 213 307 1.2E-8 T 28-03-2018 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 SUPERFAMILY SSF53784 3 309 2.09E-112 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.788 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CO704_RS23665 7fcd0b7659cc743940d6acdf2d07436d 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 5.0E-125 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CO704_RS06700 5aae0fc4650a7d9fe55b429ed7ac138b 84 SUPERFAMILY SSF54292 3 83 1.44E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS06700 5aae0fc4650a7d9fe55b429ed7ac138b 84 Gene3D G3DSA:3.10.20.30 1 84 8.5E-14 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS06700 5aae0fc4650a7d9fe55b429ed7ac138b 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 76 3.4E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS06700 5aae0fc4650a7d9fe55b429ed7ac138b 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 Gene3D G3DSA:3.40.718.10 10 416 8.8E-134 T 28-03-2018 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 1.7E-238 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 SUPERFAMILY SSF53659 3 416 4.42E-150 T 28-03-2018 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 5.4E-118 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CO704_RS14255 cad8044ebcb86d7582b5c078363aca6b 416 SMART SM01329 28 412 2.1E-179 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CO704_RS18815 57a6b7ade4cc3c6918c320daa9fbfcda 419 Pfam PF07434 CblD like pilus biogenesis initiator 45 411 5.5E-75 T 28-03-2018 IPR010888 CblD-like pilus biogenesis initiator CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.0E-22 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-18 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 SUPERFAMILY SSF116842 3 73 6.54E-21 T 28-03-2018 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 Pfam PF02609 Exonuclease VII small subunit 11 62 2.9E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.628 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 PIRSF PIRSF006488 1 79 1.1E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS18275 e8f1133c69b590a4843423395fa96387 80 Gene3D G3DSA:1.10.287.1040 8 75 9.4E-25 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 Pfam PF03652 Holliday junction resolvase 5 136 1.4E-43 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 SMART SM00732 4 104 4.8E-43 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 Gene3D G3DSA:3.30.420.140 2 139 3.5E-44 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.267 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.3E-59 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CO704_RS02805 d19a2b2ffbcdf8093da1477bcfcd55a9 139 SUPERFAMILY SSF53098 4 138 9.71E-44 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19605 24dc7e7dfb62d0be87ff554e9b956050 171 Pfam PF05258 Protein of unknown function (DUF721) 23 97 8.0E-15 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CO704_RS14980 760ef8cd582b05f05b14de6d3a2d7e13 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.4E-142 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS14980 760ef8cd582b05f05b14de6d3a2d7e13 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS14980 760ef8cd582b05f05b14de6d3a2d7e13 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 9.2E-129 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS14980 760ef8cd582b05f05b14de6d3a2d7e13 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 3.4E-228 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CO704_RS14980 760ef8cd582b05f05b14de6d3a2d7e13 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Gene3D G3DSA:3.40.50.10490 1 144 3.3E-49 T 28-03-2018 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.976 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Gene3D G3DSA:3.40.50.10490 259 512 1.3E-124 T 28-03-2018 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Gene3D G3DSA:1.10.1390.10 513 549 2.1E-21 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 SUPERFAMILY SSF53697 5 548 1.78E-225 T 28-03-2018 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Gene3D G3DSA:3.40.50.10490 145 258 1.6E-53 T 28-03-2018 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS22740 d343f64c0272beaef1adaabcad98141c 549 Pfam PF00342 Phosphoglucose isomerase 52 541 1.7E-255 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS13490 fa6c617bd3c607563aa5e07ca6636973 298 SUPERFAMILY SSF51430 4 295 4.06E-73 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS13490 fa6c617bd3c607563aa5e07ca6636973 298 Gene3D G3DSA:3.20.20.100 1 298 7.2E-64 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS13490 fa6c617bd3c607563aa5e07ca6636973 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 6.8E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS13490 fa6c617bd3c607563aa5e07ca6636973 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.8E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS13490 fa6c617bd3c607563aa5e07ca6636973 298 Pfam PF00248 Aldo/keto reductase family 16 291 3.4E-58 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS06830 076a9ef510166ddb0be6ee549c465442 341 SUPERFAMILY SSF161098 135 321 7.72E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06830 076a9ef510166ddb0be6ee549c465442 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 45 9.9E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS06830 076a9ef510166ddb0be6ee549c465442 341 Gene3D G3DSA:1.10.3720.10 10 328 3.2E-41 T 28-03-2018 CO704_RS06830 076a9ef510166ddb0be6ee549c465442 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 9.4E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 Gene3D G3DSA:2.40.128.130 578 902 2.7E-51 T 28-03-2018 CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 SMART SM00869 619 891 5.0E-46 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 Pfam PF03797 Autotransporter beta-domain 622 880 2.2E-48 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 Gene3D G3DSA:2.160.20.20 15 564 5.0E-69 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 SUPERFAMILY SSF103515 581 902 4.32E-51 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 457 902 1.3E-115 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 Pfam PF03212 Pertactin 461 559 3.9E-8 T 28-03-2018 IPR004899 Pertactin, central region CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 SUPERFAMILY SSF51126 28 136 1.73E-41 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS25335 70da126ec3ac0ce75ab777dd18f95803 902 SUPERFAMILY SSF51126 169 564 1.73E-41 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 Pfam PF06445 GyrI-like small molecule binding domain 129 287 2.2E-17 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 SMART SM00871 126 288 2.3E-9 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 SMART SM00342 21 104 2.0E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 Gene3D G3DSA:1.10.10.60 1 57 1.2E-12 T 28-03-2018 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 SUPERFAMILY SSF46689 57 109 3.94E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 SUPERFAMILY SSF46689 6 55 2.91E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 SUPERFAMILY SSF55136 122 288 1.78E-48 T 28-03-2018 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 Gene3D G3DSA:1.10.10.60 58 121 6.4E-12 T 28-03-2018 CO704_RS20030 88e054a953d8a9f91b2448d621faab10 289 Gene3D G3DSA:3.20.80.10 122 289 1.8E-21 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain CO704_RS05120 15d280d30196823bdaf3bb3ff91f362b 443 Pfam PF00296 Luciferase-like monooxygenase 21 387 2.2E-65 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS05120 15d280d30196823bdaf3bb3ff91f362b 443 Gene3D G3DSA:3.20.20.30 3 442 1.8E-98 T 28-03-2018 CO704_RS05120 15d280d30196823bdaf3bb3ff91f362b 443 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 430 4.3E-147 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS05120 15d280d30196823bdaf3bb3ff91f362b 443 SUPERFAMILY SSF51679 10 434 5.5E-119 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS05120 15d280d30196823bdaf3bb3ff91f362b 443 PIRSF PIRSF000337 3 442 2.6E-148 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS18550 76f94a34115120a1dc5a4f5b8240681b 174 Gene3D G3DSA:3.40.50.850 1 174 1.6E-36 T 28-03-2018 CO704_RS18550 76f94a34115120a1dc5a4f5b8240681b 174 Pfam PF00857 Isochorismatase family 7 139 2.6E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS18550 76f94a34115120a1dc5a4f5b8240681b 174 SUPERFAMILY SSF52499 2 155 2.75E-40 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS06425 b10022463885a89ab7845c2078c66c5c 425 Pfam PF07690 Major Facilitator Superfamily 20 312 7.6E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06425 b10022463885a89ab7845c2078c66c5c 425 Gene3D G3DSA:1.20.1250.20 11 204 6.6E-17 T 28-03-2018 CO704_RS06425 b10022463885a89ab7845c2078c66c5c 425 Gene3D G3DSA:1.20.1250.20 212 421 8.3E-22 T 28-03-2018 CO704_RS06425 b10022463885a89ab7845c2078c66c5c 425 SUPERFAMILY SSF103473 11 413 2.75E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24430 261645da942613229387d6c565694f83 339 Gene3D G3DSA:3.40.50.2300 173 339 4.8E-31 T 28-03-2018 CO704_RS24430 261645da942613229387d6c565694f83 339 SMART SM00354 7 78 6.1E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS24430 261645da942613229387d6c565694f83 339 Pfam PF13377 Periplasmic binding protein-like domain 175 337 1.2E-19 T 28-03-2018 CO704_RS24430 261645da942613229387d6c565694f83 339 SUPERFAMILY SSF53822 65 321 3.34E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS24430 261645da942613229387d6c565694f83 339 SUPERFAMILY SSF47413 7 66 2.33E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS24430 261645da942613229387d6c565694f83 339 Gene3D G3DSA:1.10.260.40 6 62 1.5E-16 T 28-03-2018 CO704_RS24430 261645da942613229387d6c565694f83 339 Gene3D G3DSA:3.40.50.2300 63 172 2.5E-31 T 28-03-2018 CO704_RS24430 261645da942613229387d6c565694f83 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 55 1.1E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 8.8E-12 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 8.8E-12 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 8.8E-12 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 8.8E-12 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.1E-55 T 28-03-2018 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 3.4E-99 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.2E-22 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06595 8c07db9cfddd9215ae398cc6e214aa85 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 609 6.2E-238 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS19535 9816908d901465f3d4762ee5bebac8b7 455 Pfam PF00324 Amino acid permease 18 450 1.2E-127 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS19535 9816908d901465f3d4762ee5bebac8b7 455 PIRSF PIRSF006060 1 453 9.6E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS19535 9816908d901465f3d4762ee5bebac8b7 455 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 369 6.1E-24 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 SUPERFAMILY SSF53686 1 424 2.23E-132 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Pfam PF14821 Threonine synthase N terminus 8 80 5.8E-13 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Gene3D G3DSA:3.40.50.1100 323 394 7.3E-13 T 28-03-2018 CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Gene3D G3DSA:3.40.50.1100 198 321 2.1E-41 T 28-03-2018 CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 1.1E-123 T 28-03-2018 IPR004450 Threonine synthase-like CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Gene3D G3DSA:3.40.50.1100 101 197 5.2E-18 T 28-03-2018 CO704_RS19955 87f5ef4b7d5caf896cacbbbccc74857f 428 Gene3D G3DSA:3.90.1380.10 1 81 6.3E-18 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CO704_RS08000 3f288326f1a124b266dda4d91a7cc005 226 Pfam PF03070 TENA/THI-4/PQQC family 17 224 4.2E-47 T 28-03-2018 IPR004305 Thiaminase-2/PQQC CO704_RS08000 3f288326f1a124b266dda4d91a7cc005 226 SUPERFAMILY SSF48613 4 222 2.37E-67 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CO704_RS08000 3f288326f1a124b266dda4d91a7cc005 226 Gene3D G3DSA:1.20.910.10 6 226 8.2E-62 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.2E-39 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.30.470.20 746 936 2.0E-43 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.40.50.1380 937 1073 5.3E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.396 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.205 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF52440 557 676 1.32E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF56059 128 401 1.38E-109 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.30.470.20 119 403 3.3E-66 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF56059 674 934 1.94E-104 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 4.4E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 2.1E-38 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SMART SM01096 424 547 3.7E-73 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF52335 939 1071 7.06E-35 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.2E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.40.50.20 4 109 3.1E-40 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.40.50.20 539 655 6.2E-63 T 28-03-2018 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SMART SM00851 956 1042 1.3E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Pfam PF02142 MGS-like domain 957 1041 3.5E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF48108 396 554 8.37E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:3.30.1490.20 656 745 1.2E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 Gene3D G3DSA:1.10.1030.10 404 538 2.7E-52 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CO704_RS19835 b93f4d8c39f81d5261dd9386c6d36832 1074 SUPERFAMILY SSF52440 1 127 2.73E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 PIRSF PIRSF001394 30 548 7.9E-235 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 3.8E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 Pfam PF05683 Fumarase C-terminus 332 537 2.3E-94 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 SUPERFAMILY SSF117457 362 536 2.35E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 Gene3D G3DSA:3.20.130.10 359 536 2.1E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.5E-85 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CO704_RS13255 a5decf1080e0bc608787ba2fda12c9a0 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 8.7E-32 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CO704_RS05460 355662ed353fb2c1c209dd950fb29966 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 1.0E-22 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS05460 355662ed353fb2c1c209dd950fb29966 159 SUPERFAMILY SSF55826 2 155 1.7E-44 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS05460 355662ed353fb2c1c209dd950fb29966 159 Gene3D G3DSA:3.90.960.10 1 159 4.2E-43 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS05460 355662ed353fb2c1c209dd950fb29966 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 8.7E-56 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CO704_RS05460 355662ed353fb2c1c209dd950fb29966 159 PIRSF PIRSF006181 1 159 6.4E-59 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 396 411 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 123 142 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 341 359 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 365 383 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 31 56 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 221 237 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 269 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 Gene3D G3DSA:3.40.50.720 204 443 0.0032 T 28-03-2018 CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 SUPERFAMILY SSF56235 5 527 1.04E-149 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS19020 48539a6a236a6f6c72bc80eca838f1b6 527 Pfam PF01019 Gamma-glutamyltranspeptidase 24 522 8.1E-130 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CO704_RS21265 43cf708221440af3ffdfbb519d3749b2 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 1.0E-36 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit CO704_RS21265 43cf708221440af3ffdfbb519d3749b2 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 4.8E-30 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit CO704_RS21265 43cf708221440af3ffdfbb519d3749b2 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 42.105 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit CO704_RS21265 43cf708221440af3ffdfbb519d3749b2 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 95 1.8E-22 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CO704_RS22380 7e807a50c9e38e9a2d76bb1b240eb57b 252 Pfam PF12706 Beta-lactamase superfamily domain 72 223 3.3E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS22380 7e807a50c9e38e9a2d76bb1b240eb57b 252 Gene3D G3DSA:3.60.15.10 1 252 1.0E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS22380 7e807a50c9e38e9a2d76bb1b240eb57b 252 SUPERFAMILY SSF56281 5 249 3.94E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS22380 7e807a50c9e38e9a2d76bb1b240eb57b 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 3.1E-119 T 28-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS14120 1e6f91c213bce6528d11d3b4aa7d9fe8 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.294 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CO704_RS14120 1e6f91c213bce6528d11d3b4aa7d9fe8 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 3.0E-35 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CO704_RS14120 1e6f91c213bce6528d11d3b4aa7d9fe8 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 4.8E-45 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Gene3D G3DSA:2.60.120.10 10 101 3.0E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 SMART SM00342 172 254 7.9E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Gene3D G3DSA:1.10.10.60 226 259 8.1E-11 T 28-03-2018 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 250 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 SUPERFAMILY SSF51182 21 77 4.93E-9 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 SUPERFAMILY SSF46689 154 206 1.73E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Gene3D G3DSA:1.10.10.60 153 203 1.4E-10 T 28-03-2018 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Gene3D G3DSA:1.10.10.60 204 225 0.086 T 28-03-2018 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 SUPERFAMILY SSF46689 208 257 1.52E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Pfam PF12833 Helix-turn-helix domain 178 256 8.6E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS20210 9bdf522d4ac7fa50c8df928571e2e9cf 262 Pfam PF02311 AraC-like ligand binding domain 31 79 2.8E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 SUPERFAMILY SSF52283 1 133 7.75E-26 T 28-03-2018 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.1E-25 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 69.93 T 28-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.8E-62 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 Gene3D G3DSA:3.40.50.720 114 290 1.1E-56 T 28-03-2018 CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 SUPERFAMILY SSF51735 100 288 1.21E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS24410 39e852f8ab6d21f0e6aff618cbe8e870 324 Gene3D G3DSA:3.40.50.720 1 113 9.3E-26 T 28-03-2018 CO704_RS01885 86d40eac60956f59c4d69f8abe79300b 217 SUPERFAMILY SSF51735 1 201 1.12E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01885 86d40eac60956f59c4d69f8abe79300b 217 Pfam PF13460 NAD(P)H-binding 8 190 5.8E-8 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01885 86d40eac60956f59c4d69f8abe79300b 217 Gene3D G3DSA:3.40.50.720 2 208 3.9E-17 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Gene3D G3DSA:3.30.450.20 83 185 6.8E-11 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SUPERFAMILY SSF55021 2 68 4.63E-5 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Gene3D G3DSA:1.10.8.60 379 449 5.1E-19 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Gene3D G3DSA:3.30.70.260 1 82 2.7E-9 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SUPERFAMILY SSF55785 82 175 1.37E-8 T 28-03-2018 IPR000014 PAS domain CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SUPERFAMILY SSF46689 461 514 6.72E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SUPERFAMILY SSF52540 206 447 1.05E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SMART SM00382 226 370 3.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Gene3D G3DSA:1.10.10.60 456 515 1.1E-7 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Gene3D G3DSA:3.40.50.300 201 378 5.8E-24 T 28-03-2018 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 Pfam PF00158 Sigma-54 interaction domain 207 372 2.0E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 SMART SM00091 80 146 7.3E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS10500 badb439f30c62d0cff64c2393ec4b002 520 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 467 514 2.3E-28 T 28-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CO704_RS25270 8110d47650db29e70db6bf0c87d1b178 401 SUPERFAMILY SSF111369 59 249 1.31E-23 T 28-03-2018 CO704_RS25270 8110d47650db29e70db6bf0c87d1b178 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 385 2.1E-47 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS25270 8110d47650db29e70db6bf0c87d1b178 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 269 6.5E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS25270 8110d47650db29e70db6bf0c87d1b178 401 Gene3D G3DSA:1.20.1600.10 50 332 2.4E-34 T 28-03-2018 CO704_RS12660 715a09a02dd58b85bb9cffa0b2a5486f 416 Gene3D G3DSA:1.20.1250.20 23 226 6.0E-32 T 28-03-2018 CO704_RS12660 715a09a02dd58b85bb9cffa0b2a5486f 416 Gene3D G3DSA:1.20.1250.20 227 416 1.5E-12 T 28-03-2018 CO704_RS12660 715a09a02dd58b85bb9cffa0b2a5486f 416 SUPERFAMILY SSF103473 23 412 3.79E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12660 715a09a02dd58b85bb9cffa0b2a5486f 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS12660 715a09a02dd58b85bb9cffa0b2a5486f 416 Pfam PF07690 Major Facilitator Superfamily 41 266 5.8E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS25190 d4c8e6b897da5dfe61202022fdff2f38 108 Gene3D G3DSA:3.30.2310.20 1 104 1.1E-4 T 28-03-2018 CO704_RS25190 d4c8e6b897da5dfe61202022fdff2f38 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 96 2.7E-7 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 SUPERFAMILY SSF64263 1 118 5.23E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01225 cd98af2474d8ced0a2f7e8630970f882 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS25625 8f66d6a36f23c202fd7819b08d2a252b 85 Gene3D G3DSA:1.10.1200.10 2 85 2.8E-14 T 28-03-2018 CO704_RS25625 8f66d6a36f23c202fd7819b08d2a252b 85 SUPERFAMILY SSF47336 3 83 9.29E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS25625 8f66d6a36f23c202fd7819b08d2a252b 85 Pfam PF00550 Phosphopantetheine attachment site 8 62 3.7E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 Gene3D G3DSA:3.40.30.10 2 160 4.3E-47 T 28-03-2018 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 SUPERFAMILY SSF52833 3 158 9.77E-61 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 Pfam PF00255 Glutathione peroxidase 4 111 7.0E-42 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 8.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 8.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 8.7E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 PIRSF PIRSF000303 1 160 4.1E-66 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS12805 33de412b39ce2d1b39e8014448ce84b0 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CO704_RS19210 01b93583a5e76764d429793eb31aed6b 103 Gene3D G3DSA:1.10.760.10 14 101 5.1E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS19210 01b93583a5e76764d429793eb31aed6b 103 Pfam PF00034 Cytochrome c 32 102 2.1E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS19210 01b93583a5e76764d429793eb31aed6b 103 SUPERFAMILY SSF46626 12 101 4.01E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CO704_RS19210 01b93583a5e76764d429793eb31aed6b 103 PRINTS PR00605 Class IC cytochrome C signature 76 98 7.9E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CO704_RS19210 01b93583a5e76764d429793eb31aed6b 103 PRINTS PR00605 Class IC cytochrome C signature 31 42 7.9E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 Gene3D G3DSA:1.10.3370.10 12 439 7.3E-161 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 SUPERFAMILY SSF103491 16 424 1.57E-134 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PIRSF PIRSF004557 11 441 2.3E-124 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 Pfam PF00344 SecY translocase 76 417 2.2E-120 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.4E-98 T 28-03-2018 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 3.0E-141 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS01195 35a9406b39a82569f978a83f0b33a09a 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.079 T 28-03-2018 IPR026593 Protein translocase subunit SecY CO704_RS24485 204d18bea51f95d9f35c87fbce34f66e 63 Pfam PF05534 HicB family 18 46 9.2E-5 T 28-03-2018 IPR008651 Uncharacterised protein family HicB CO704_RS24485 204d18bea51f95d9f35c87fbce34f66e 63 Gene3D G3DSA:1.10.1220.10 4 59 1.6E-10 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS24485 204d18bea51f95d9f35c87fbce34f66e 63 SUPERFAMILY SSF47598 14 59 5.19E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS14165 02c0bb8c6b4f4b21876b4abae79f26da 235 Pfam PF00117 Glutamine amidotransferase class-I 28 228 7.1E-11 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS14165 02c0bb8c6b4f4b21876b4abae79f26da 235 Gene3D G3DSA:3.40.50.880 6 235 9.4E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS14165 02c0bb8c6b4f4b21876b4abae79f26da 235 SUPERFAMILY SSF52317 9 233 8.96E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Gene3D G3DSA:3.90.230.10 296 547 2.6E-51 T 28-03-2018 CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Pfam PF16189 Creatinase/Prolidase N-terminal domain 143 301 1.3E-33 T 28-03-2018 CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 SUPERFAMILY SSF55920 298 552 6.93E-45 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Gene3D G3DSA:3.40.350.10 1 141 3.9E-37 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Gene3D G3DSA:3.40.350.10 150 287 3.9E-20 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 SUPERFAMILY SSF53092 10 130 3.14E-10 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Pfam PF00557 Metallopeptidase family M24 335 521 1.5E-36 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Pfam PF16188 C-terminal region of peptidase_M24 528 586 6.1E-21 T 28-03-2018 IPR032416 Peptidase M24, C-terminal domain CO704_RS07890 525c54b65930dd5781db8c31a80f5971 593 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 130 1.5E-15 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CO704_RS13725 ff720bd277961aaade4a442e110cc416 348 Pfam PF00793 DAHP synthetase I family 39 336 9.2E-108 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS13725 ff720bd277961aaade4a442e110cc416 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.1E-173 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS13725 ff720bd277961aaade4a442e110cc416 348 SUPERFAMILY SSF51569 7 347 1.74E-133 T 28-03-2018 CO704_RS13725 ff720bd277961aaade4a442e110cc416 348 Gene3D G3DSA:3.20.20.70 7 348 7.9E-124 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS13725 ff720bd277961aaade4a442e110cc416 348 PIRSF PIRSF001361 1 348 2.4E-159 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS21700 27a6e0c5d1ebe71c19b89f922991be90 158 Gene3D G3DSA:1.10.10.10 27 96 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21700 27a6e0c5d1ebe71c19b89f922991be90 158 Pfam PF01527 Transposase 40 95 2.4E-14 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CO704_RS21700 27a6e0c5d1ebe71c19b89f922991be90 158 SUPERFAMILY SSF48295 34 89 1.62E-10 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CO704_RS21560 27a6e0c5d1ebe71c19b89f922991be90 158 Gene3D G3DSA:1.10.10.10 27 96 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21560 27a6e0c5d1ebe71c19b89f922991be90 158 Pfam PF01527 Transposase 40 95 2.4E-14 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CO704_RS21560 27a6e0c5d1ebe71c19b89f922991be90 158 SUPERFAMILY SSF48295 34 89 1.62E-10 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 Pfam PF01491 Frataxin-like domain 1 102 1.4E-28 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 8.6E-43 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 Gene3D G3DSA:3.30.920.10 1 106 1.4E-32 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.254 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 SMART SM01219 1 106 5.5E-55 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS23235 29045d9232aa479f048f6ad226a88ec3 106 SUPERFAMILY SSF55387 1 105 4.88E-39 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 SUPERFAMILY SSF51735 4 247 7.87E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 186 0.0033 T 28-03-2018 CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 Gene3D G3DSA:3.40.50.720 5 247 4.7E-71 T 28-03-2018 CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 6 247 1.9E-111 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 CO704_RS26005 2dc7cbd16075794033f581c5ea949c28 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 1.0E-58 T 28-03-2018 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 SUPERFAMILY SSF46785 6 86 7.31E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 Gene3D G3DSA:1.10.10.10 5 89 3.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 Gene3D G3DSA:3.40.190.10 95 180 3.9E-12 T 28-03-2018 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 Pfam PF03466 LysR substrate binding domain 96 296 9.6E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 3.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 Gene3D G3DSA:3.40.190.10 181 265 1.5E-16 T 28-03-2018 CO704_RS20020 e595d9dcdd04a52b7efac15e82f79196 300 SUPERFAMILY SSF53850 96 296 3.44E-33 T 28-03-2018 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SMART SM01240 7 473 0.0 T 28-03-2018 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 4.8E-196 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.969 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SUPERFAMILY SSF51412 217 477 3.4E-124 T 28-03-2018 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SUPERFAMILY SSF51412 1 90 3.4E-124 T 28-03-2018 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.1E-159 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 Gene3D G3DSA:3.20.20.70 1 482 2.0E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SMART SM00116 96 144 2.9E-11 T 28-03-2018 IPR000644 CBS domain CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SMART SM00116 158 206 2.5E-6 T 28-03-2018 IPR000644 CBS domain CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 PIRSF PIRSF000130 1 488 2.2E-193 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 Pfam PF00571 CBS domain 95 140 5.4E-9 T 28-03-2018 IPR000644 CBS domain CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CO704_RS05035 d67f30d1d0e00e55ab2d263d6e4d8155 488 SUPERFAMILY SSF54631 94 203 3.54E-23 T 28-03-2018 CO704_RS01025 34a4e2d236c879db9a79982dbc39d725 72 Pfam PF04102 SlyX 7 72 6.0E-24 T 28-03-2018 IPR007236 SlyX CO704_RS01025 34a4e2d236c879db9a79982dbc39d725 72 Gene3D G3DSA:1.20.5.300 4 50 5.0E-17 T 28-03-2018 CO704_RS01025 34a4e2d236c879db9a79982dbc39d725 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.625 T 28-03-2018 IPR007236 SlyX CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 Gene3D G3DSA:3.90.1150.10 279 456 2.4E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 PIRSF PIRSF000521 142 456 3.5E-36 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 PIRSF PIRSF000521 3 148 4.8E-10 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 22 456 1.5E-213 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 Pfam PF00202 Aminotransferase class-III 41 453 1.2E-101 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 Gene3D G3DSA:3.90.1150.10 200 278 9.5E-4 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 Gene3D G3DSA:3.90.1150.10 10 192 4.1E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS22555 9346522d6dbd6ae870a3420392ca9bb0 461 SUPERFAMILY SSF53383 31 453 5.47E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS05215 ba2d3f54a8e3df319f62ca76e9d85244 354 Gene3D G3DSA:3.40.50.2300 161 304 2.2E-21 T 28-03-2018 CO704_RS05215 ba2d3f54a8e3df319f62ca76e9d85244 354 Pfam PF13407 Periplasmic binding protein domain 49 298 9.2E-28 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS05215 ba2d3f54a8e3df319f62ca76e9d85244 354 SUPERFAMILY SSF53822 38 308 3.53E-42 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS05215 ba2d3f54a8e3df319f62ca76e9d85244 354 Gene3D G3DSA:3.40.50.2300 30 160 2.5E-15 T 28-03-2018 CO704_RS06575 f65b3357438783541200d27f4742f164 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.022 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06575 f65b3357438783541200d27f4742f164 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06575 f65b3357438783541200d27f4742f164 325 Pfam PF00146 NADH dehydrogenase 17 317 3.1E-120 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06575 f65b3357438783541200d27f4742f164 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.3E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.3E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.3E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.3E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.3E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 SUPERFAMILY SSF55831 1 264 4.97E-131 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.065 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.0E-42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 5.2E-94 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 Pfam PF00303 Thymidylate synthase 2 264 2.6E-127 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS03360 4506446e60fcb43ce8b7fd7eadde8c80 264 Gene3D G3DSA:3.30.572.10 1 264 1.2E-133 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 SMART SM00354 1 71 9.1E-31 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 Gene3D G3DSA:1.10.260.40 2 54 3.7E-23 T 28-03-2018 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 SUPERFAMILY SSF53822 61 336 4.12E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 Gene3D G3DSA:3.40.50.2300 179 335 4.6E-42 T 28-03-2018 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.9E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 Pfam PF13377 Periplasmic binding protein-like domain 172 331 1.6E-31 T 28-03-2018 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 SUPERFAMILY SSF47413 2 59 6.19E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07250 55c26e945c4d695a868ddb49cb7aa7ef 340 Gene3D G3DSA:3.40.50.2300 55 178 7.2E-25 T 28-03-2018 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 SMART SM00829 13 335 1.0E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 SUPERFAMILY SSF50129 8 162 6.09E-42 T 28-03-2018 IPR011032 GroES-like CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 Gene3D G3DSA:3.90.180.10 254 337 0.016 T 28-03-2018 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 5.0E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 3.8E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 SUPERFAMILY SSF51735 142 305 6.66E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 Gene3D G3DSA:3.90.180.10 3 184 2.1E-47 T 28-03-2018 CO704_RS02085 1653e965669a26e81af89aee23b1445b 339 Gene3D G3DSA:3.40.50.20 185 253 5.8E-18 T 28-03-2018 CO704_RS17860 2127d0c03ccb4350368658ee1a935678 240 Pfam PF01738 Dienelactone hydrolase family 23 238 1.2E-42 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CO704_RS17860 2127d0c03ccb4350368658ee1a935678 240 Gene3D G3DSA:3.40.50.1820 1 237 8.2E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17860 2127d0c03ccb4350368658ee1a935678 240 SUPERFAMILY SSF53474 6 236 2.7E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS23605 7f95e0ef893141ebafe38d17c0d8a9ce 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.126 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CO704_RS23605 7f95e0ef893141ebafe38d17c0d8a9ce 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 1.1E-139 T 28-03-2018 CO704_RS23605 7f95e0ef893141ebafe38d17c0d8a9ce 308 Pfam PF01040 UbiA prenyltransferase family 29 279 2.8E-38 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CO704_RS23605 7f95e0ef893141ebafe38d17c0d8a9ce 308 PIRSF PIRSF005355 1 307 2.7E-93 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 SUPERFAMILY SSF55874 339 479 3.01E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 Pfam PF08918 PhoQ Sensor 10 190 1.8E-80 T 28-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 4.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 4.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 Gene3D G3DSA:3.30.565.10 338 489 7.0E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 SMART SM00388 269 332 0.0056 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 SMART SM00387 377 483 9.2E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS14290 68ac3e0eec803540c178950fe8468449 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 473 1.6E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 1.3E-28 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 SMART SM00487 22 219 4.8E-57 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Pfam PF00270 DEAD/DEAH box helicase 27 190 4.8E-44 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 SMART SM00490 255 336 6.5E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Pfam PF03880 DbpA RNA binding domain 384 454 5.7E-22 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Gene3D G3DSA:3.40.50.300 220 453 4.2E-43 T 28-03-2018 CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Gene3D G3DSA:3.40.50.300 6 219 2.8E-57 T 28-03-2018 CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 67.815 T 28-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CO704_RS10600 0e5ccaaa8d707bd0152d1c0aa9a9784b 457 SUPERFAMILY SSF52540 73 350 1.95E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 SUPERFAMILY SSF52374 7 215 1.02E-58 T 28-03-2018 CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 Gene3D G3DSA:3.40.50.620 3 215 3.3E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 Pfam PF01467 Cytidylyltransferase-like 9 189 1.7E-33 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 5 215 30.712 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 4.7E-12 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS17225 2acca08f6821c56dcc4d2675f57f1e82 215 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 9 214 1.0E-53 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CO704_RS11210 4f3190614fc23995657c5bb4a8f9d9d9 259 Pfam PF12697 Alpha/beta hydrolase family 36 248 1.3E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS11210 4f3190614fc23995657c5bb4a8f9d9d9 259 SUPERFAMILY SSF53474 34 251 3.71E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11210 4f3190614fc23995657c5bb4a8f9d9d9 259 Gene3D G3DSA:3.40.50.1820 18 253 2.0E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17305 9ffff4a076ad4137f7aef0a7a31b779d 190 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 37 178 6.0E-71 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CO704_RS17305 9ffff4a076ad4137f7aef0a7a31b779d 190 Gene3D G3DSA:2.40.160.20 33 190 1.4E-65 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS17305 9ffff4a076ad4137f7aef0a7a31b779d 190 SUPERFAMILY SSF56925 33 190 2.12E-79 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS17305 9ffff4a076ad4137f7aef0a7a31b779d 190 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 4 190 42.661 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CO704_RS17305 9ffff4a076ad4137f7aef0a7a31b779d 190 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 42 187 1.2E-66 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 Pfam PF02033 Ribosome-binding factor A 7 112 3.9E-32 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 4.0E-43 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 118 2.5E-42 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 22.719 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 SUPERFAMILY SSF89919 2 107 1.7E-35 T 28-03-2018 IPR023799 Ribosome-binding factor A domain CO704_RS01810 13ab317399823df782b9c7b731a8a1e5 133 Gene3D G3DSA:3.30.300.20 1 106 4.2E-35 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 6.4E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 6.4E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 6.4E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 6.4E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 461 3.2E-98 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 Gene3D G3DSA:1.10.1040.10 282 488 1.5E-67 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 3.0E-50 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 Gene3D G3DSA:3.40.50.720 1 281 2.5E-109 T 28-03-2018 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 SUPERFAMILY SSF51735 6 282 4.72E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 SUPERFAMILY SSF48179 283 485 1.05E-64 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS06870 102708b26de34266d58da77ceaa7dce5 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS17960 7fff5cdd12b29974757874c63b4a6cab 93 PIRSF PIRSF006156 4 93 1.1E-24 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CO704_RS17960 7fff5cdd12b29974757874c63b4a6cab 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 91 1.9E-25 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CO704_RS17960 7fff5cdd12b29974757874c63b4a6cab 93 Gene3D G3DSA:3.30.2310.20 3 93 2.6E-22 T 28-03-2018 CO704_RS17960 7fff5cdd12b29974757874c63b4a6cab 93 SUPERFAMILY SSF143011 1 91 6.47E-23 T 28-03-2018 IPR035095 Toxin RelE-like domain CO704_RS17960 7fff5cdd12b29974757874c63b4a6cab 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 4 92 3.3E-31 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 Gene3D G3DSA:3.40.50.1000 88 219 1.6E-22 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 1.7E-14 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 Gene3D G3DSA:3.40.50.1000 7 87 0.25 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 118 207 2.4E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 201 4.5E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS23210 13e43afbd76d4cf8d9df5a99a8ce50e5 238 SUPERFAMILY SSF56784 10 238 6.03E-41 T 28-03-2018 IPR023214 HAD-like domain CO704_RS22410 eca001143d72393183fe491a0f657b36 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 1.7E-46 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS22410 eca001143d72393183fe491a0f657b36 326 Gene3D G3DSA:1.10.3470.10 46 323 4.4E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 SUPERFAMILY SSF52172 6 185 1.57E-47 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Pfam PF00072 Response regulator receiver domain 6 115 8.3E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Pfam PF02954 Bacterial regulatory protein, Fis family 429 468 1.7E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 SMART SM00448 4 115 6.1E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Pfam PF00158 Sigma-54 interaction domain 140 306 3.3E-69 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 8.0E-245 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Gene3D G3DSA:3.40.50.300 137 312 5.1E-29 T 28-03-2018 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 SMART SM00382 160 311 2.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Gene3D G3DSA:1.10.8.60 313 386 1.9E-21 T 28-03-2018 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Gene3D G3DSA:1.10.10.60 387 471 1.4E-25 T 28-03-2018 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 SUPERFAMILY SSF52540 139 383 2.62E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 Gene3D G3DSA:3.40.50.2300 2 136 8.5E-38 T 28-03-2018 CO704_RS23945 a2ac552e556548ae75b6e68cb6e3c402 471 SUPERFAMILY SSF46689 380 471 3.33E-22 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 Pfam PF00474 Sodium:solute symporter family 63 468 2.6E-135 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 3.6E-63 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 56.494 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CO704_RS22475 84d0955a04bca867d612f4d4bf47b83d 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 239 1.8E-53 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 436 8.8E-27 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 Gene3D G3DSA:3.30.420.40 238 483 4.2E-42 T 28-03-2018 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 SUPERFAMILY SSF53067 243 470 1.67E-39 T 28-03-2018 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 PIRSF PIRSF000538 3 483 6.4E-111 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 SUPERFAMILY SSF53067 6 244 3.4E-68 T 28-03-2018 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 Gene3D G3DSA:3.30.420.40 3 237 1.9E-64 T 28-03-2018 CO704_RS10910 7da519435146332293b27e67b8fa740f 483 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 372 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 6 533 4.1E-259 T 28-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 Pfam PF04324 BFD-like [2Fe-2S] binding domain 428 480 2.7E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 348 358 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 SUPERFAMILY SSF51905 5 222 3.24E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 SUPERFAMILY SSF51905 326 368 3.24E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 Gene3D G3DSA:3.50.50.60 1 389 7.2E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 Pfam PF01266 FAD dependent oxidoreductase 6 355 1.1E-53 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 343 355 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 307 313 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS06685 c83ac8d5b147f55789cc922887e419d0 536 SUPERFAMILY SSF54373 222 313 1.22E-11 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Pfam PF13247 4Fe-4S dicluster domain 176 272 1.8E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 437 2.2E-30 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Gene3D G3DSA:3.30.70.20 5 198 4.2E-29 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 SUPERFAMILY SSF54862 1 504 5.23E-187 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Gene3D G3DSA:3.30.70.20 365 467 2.2E-30 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Gene3D G3DSA:3.30.70.20 238 364 1.4E-31 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 Gene3D G3DSA:3.30.70.20 199 237 1.6E-19 T 28-03-2018 CO704_RS09745 0cfa445c884af8345d92e8d8590f5686 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.0E-303 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CO704_RS24475 413c6b2badecf9ce99d7277a581047e4 134 Gene3D G3DSA:3.40.50.1010 2 134 8.9E-27 T 28-03-2018 IPR029060 PIN domain-like CO704_RS24475 413c6b2badecf9ce99d7277a581047e4 134 SUPERFAMILY SSF88723 1 132 1.26E-36 T 28-03-2018 IPR029060 PIN domain-like CO704_RS24475 413c6b2badecf9ce99d7277a581047e4 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 12.897 T 28-03-2018 IPR022907 VapC family GO:0004540 CO704_RS24475 413c6b2badecf9ce99d7277a581047e4 134 Pfam PF01850 PIN domain 4 124 3.7E-15 T 28-03-2018 IPR002716 PIN domain CO704_RS01300 079317a1a43d0d7c146cf0cae2d1af6e 184 Gene3D G3DSA:2.160.10.10 2 184 6.0E-41 T 28-03-2018 CO704_RS01300 079317a1a43d0d7c146cf0cae2d1af6e 184 SUPERFAMILY SSF51161 5 176 7.76E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS01300 079317a1a43d0d7c146cf0cae2d1af6e 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 0.0014 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS01300 079317a1a43d0d7c146cf0cae2d1af6e 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.1E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS11710 72e687f1825915d0dab8559ddcdf7d29 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.9E-29 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS11710 72e687f1825915d0dab8559ddcdf7d29 109 SUPERFAMILY SSF103481 6 105 1.09E-21 T 28-03-2018 CO704_RS01460 3f05352d4e631798ecf25fae2bf0b782 1270 Pfam PF13502 AsmA-like C-terminal region 1014 1256 1.5E-63 T 28-03-2018 IPR032712 AsmA-like, C-terminal CO704_RS01460 3f05352d4e631798ecf25fae2bf0b782 1270 Pfam PF13116 Protein of unknown function 506 790 1.2E-96 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 CO704_RS01460 3f05352d4e631798ecf25fae2bf0b782 1270 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1266 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 8.7E-23 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 Pfam PF07687 Peptidase dimerisation domain 183 282 3.1E-17 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 8 400 2.4E-217 T 28-03-2018 IPR017706 Peptidase M20/DapE, YgeY CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 Gene3D G3DSA:3.40.630.10 6 287 1.8E-49 T 28-03-2018 CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 SUPERFAMILY SSF55031 185 282 1.64E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 SUPERFAMILY SSF53187 10 185 3.27E-54 T 28-03-2018 CO704_RS11010 1de50d57f0fc9d50647482a4c795a54f 403 SUPERFAMILY SSF53187 316 399 3.27E-54 T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 Gene3D G3DSA:1.10.260.40 18 73 1.7E-21 T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 Pfam PF13377 Periplasmic binding protein-like domain 192 346 4.0E-14 T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 SUPERFAMILY SSF53822 77 339 5.3E-46 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 Gene3D G3DSA:3.40.50.2300 74 184 2.6E-22 T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 19 345 3.1E-137 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 29 39 4.8E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 4.8E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 67 7.6E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 20 38 - T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 Gene3D G3DSA:3.40.50.2300 185 346 2.2E-25 T 28-03-2018 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 SUPERFAMILY SSF47413 18 75 2.6E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS11225 0467d8ba248ba098e4f721e7b8143915 346 SMART SM00354 17 90 1.5E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS06220 cfe74fc7bb07f11d813b4b58f13509db 358 Pfam PF03918 Cytochrome C biogenesis protein 8 134 2.3E-52 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CO704_RS06220 cfe74fc7bb07f11d813b4b58f13509db 358 Gene3D G3DSA:1.25.40.10 65 272 7.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS06220 cfe74fc7bb07f11d813b4b58f13509db 358 SUPERFAMILY SSF48452 222 332 1.26E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS06220 cfe74fc7bb07f11d813b4b58f13509db 358 Gene3D G3DSA:1.25.40.10 273 347 6.4E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS08185 32be36dfc3f32e5f82d627b86bdb85d0 424 Pfam PF13356 Arm DNA-binding domain 3 88 7.2E-23 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS08185 32be36dfc3f32e5f82d627b86bdb85d0 424 Pfam PF00589 Phage integrase family 208 391 2.5E-19 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS08185 32be36dfc3f32e5f82d627b86bdb85d0 424 SUPERFAMILY SSF56349 101 396 3.83E-49 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS08185 32be36dfc3f32e5f82d627b86bdb85d0 424 Gene3D G3DSA:1.10.443.10 205 402 1.9E-22 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS08185 32be36dfc3f32e5f82d627b86bdb85d0 424 Gene3D G3DSA:1.10.150.130 90 204 9.4E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS15965 e0fd3551583373ec22ec92ab54a06068 295 SUPERFAMILY SSF103481 184 279 4.71E-10 T 28-03-2018 CO704_RS15965 e0fd3551583373ec22ec92ab54a06068 295 Pfam PF00892 EamA-like transporter family 148 278 9.6E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS15965 e0fd3551583373ec22ec92ab54a06068 295 SUPERFAMILY SSF103481 46 136 2.22E-6 T 28-03-2018 CO704_RS13345 0577c091e49850118b065373a5784fe0 77 Gene3D G3DSA:1.20.1280.40 7 76 1.4E-27 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS13345 0577c091e49850118b065373a5784fe0 77 Pfam PF05321 Haemolysin expression modulating protein 14 74 6.0E-26 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS13345 0577c091e49850118b065373a5784fe0 77 SUPERFAMILY SSF68989 6 76 1.7E-20 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CO704_RS17265 52214f59972f632b6eca204847b12c04 87 Gene3D G3DSA:3.30.70.260 5 87 8.7E-31 T 28-03-2018 CO704_RS17265 52214f59972f632b6eca204847b12c04 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.533 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 CO704_RS17265 52214f59972f632b6eca204847b12c04 87 SUPERFAMILY SSF117991 1 87 1.28E-31 T 28-03-2018 IPR027471 YbeD-like domain CO704_RS17265 52214f59972f632b6eca204847b12c04 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 2.2E-29 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 SUPERFAMILY SSF63411 266 503 4.0E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 SUPERFAMILY SSF63411 34 264 1.87E-50 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 SUPERFAMILY SSF63411 505 729 4.0E-43 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Gene3D G3DSA:3.30.830.10 504 745 1.1E-27 T 28-03-2018 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Gene3D G3DSA:3.30.830.10 746 924 3.6E-27 T 28-03-2018 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Gene3D G3DSA:3.30.830.10 273 503 1.2E-57 T 28-03-2018 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 SUPERFAMILY SSF63411 737 957 1.22E-42 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Pfam PF16187 Middle or third domain of peptidase_M16 401 674 5.9E-53 T 28-03-2018 IPR032632 Peptidase M16, middle/third domain CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Pfam PF05193 Peptidase M16 inactive domain 683 857 9.9E-11 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Pfam PF05193 Peptidase M16 inactive domain 216 393 1.2E-19 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Gene3D G3DSA:3.30.830.10 24 269 2.7E-69 T 28-03-2018 CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 3.6E-37 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CO704_RS03390 3a2decc1e328195ec22c8becc266cc57 961 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CO704_RS25550 df569f32dc5cf97487072e9613b73807 228 Pfam PF02592 Putative vitamin uptake transporter 38 196 2.3E-18 T 28-03-2018 IPR003744 Queuosine precursor transporter CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 294 1.6E-50 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 Gene3D G3DSA:3.40.50.720 136 295 3.2E-40 T 28-03-2018 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 SUPERFAMILY SSF55021 338 411 1.95E-18 T 28-03-2018 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.8E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 Gene3D G3DSA:3.30.70.260 328 411 1.9E-15 T 28-03-2018 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 Gene3D G3DSA:3.40.50.720 1 135 4.5E-41 T 28-03-2018 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 SUPERFAMILY SSF52283 7 138 7.23E-50 T 28-03-2018 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 SUPERFAMILY SSF51735 108 295 2.66E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02970 c77aabcb65551a94c03828feb030ebb9 412 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 SMART SM00345 20 79 7.6E-24 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 Gene3D G3DSA:1.20.120.530 99 241 5.8E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 2.6E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 Pfam PF07729 FCD domain 101 226 7.8E-20 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 Gene3D G3DSA:1.10.10.10 7 81 1.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 SMART SM00895 101 227 1.1E-21 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 SUPERFAMILY SSF46785 12 83 1.79E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20475 6f24aee4f86179eafc74f1269b34db60 258 SUPERFAMILY SSF48008 99 235 9.94E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS07910 557a3424aca935accea1c0548bd62531 335 Pfam PF13602 Zinc-binding dehydrogenase 192 332 1.4E-23 T 28-03-2018 CO704_RS07910 557a3424aca935accea1c0548bd62531 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 3 335 1.6E-160 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CO704_RS07910 557a3424aca935accea1c0548bd62531 335 SUPERFAMILY SSF51735 119 285 4.41E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07910 557a3424aca935accea1c0548bd62531 335 SUPERFAMILY SSF50129 1 142 8.33E-32 T 28-03-2018 IPR011032 GroES-like CO704_RS07910 557a3424aca935accea1c0548bd62531 335 SMART SM00829 14 332 3.6E-10 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS07910 557a3424aca935accea1c0548bd62531 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 88 6.7E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS07910 557a3424aca935accea1c0548bd62531 335 Gene3D G3DSA:3.40.50.720 142 298 4.3E-22 T 28-03-2018 CO704_RS07910 557a3424aca935accea1c0548bd62531 335 Gene3D G3DSA:3.90.180.10 1 141 1.5E-31 T 28-03-2018 CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 Pfam PF07690 Major Facilitator Superfamily 19 412 1.8E-50 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 SUPERFAMILY SSF103473 8 198 5.75E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 SUPERFAMILY SSF103473 251 422 5.75E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 SUPERFAMILY SSF103473 471 497 5.75E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 494 2.4E-152 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 Gene3D G3DSA:1.20.1250.20 3 198 4.0E-38 T 28-03-2018 CO704_RS18540 3a3647319989e4d4cfd1f28b467a1111 511 Gene3D G3DSA:1.20.1250.20 255 501 4.2E-22 T 28-03-2018 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Gene3D G3DSA:3.10.290.10 331 424 2.0E-22 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 SUPERFAMILY SSF52374 5 328 1.08E-107 T 28-03-2018 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 SUPERFAMILY SSF55174 327 423 4.84E-22 T 28-03-2018 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 SMART SM00363 357 419 7.1E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.087 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 4.9E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 4.9E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 4.9E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 4.9E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Gene3D G3DSA:1.10.240.10 228 330 1.6E-32 T 28-03-2018 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 4.7E-90 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Pfam PF01479 S4 domain 359 403 1.8E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 424 1.5E-145 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CO704_RS13405 ce6bb014879c24be1d79639e68ee71c8 424 Gene3D G3DSA:3.40.50.620 1 227 1.7E-69 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 SMART SM00671 103 138 2.6E-5 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 SMART SM00671 67 102 1.5E-8 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 SMART SM00671 31 66 1.9E-4 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 SMART SM00671 139 174 1.0E-8 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Gene3D G3DSA:1.25.40.10 94 184 6.6E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 SUPERFAMILY SSF81901 41 181 1.4E-38 T 28-03-2018 CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Gene3D G3DSA:2.60.40.1180 13 93 4.8E-23 T 28-03-2018 CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Pfam PF08238 Sel1 repeat 68 102 2.1E-7 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Pfam PF08238 Sel1 repeat 38 66 1.8E-4 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Pfam PF08238 Sel1 repeat 139 174 1.6E-8 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS22085 d4aade3d2290054fdb0c4f484955da34 188 Pfam PF08238 Sel1 repeat 104 137 6.4E-6 T 28-03-2018 IPR006597 Sel1-like repeat CO704_RS05985 b013f9619104311839d81cca564c84d0 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 1.0E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05985 b013f9619104311839d81cca564c84d0 567 SUPERFAMILY SSF55874 414 551 6.68E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05985 b013f9619104311839d81cca564c84d0 567 Pfam PF07694 5TMR of 5TMR-LYT 29 192 9.9E-44 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CO704_RS05985 b013f9619104311839d81cca564c84d0 567 SMART SM00387 452 554 4.5E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05985 b013f9619104311839d81cca564c84d0 567 Gene3D G3DSA:3.30.450.40 225 332 6.9E-5 T 28-03-2018 IPR029016 GAF domain-like CO704_RS05985 b013f9619104311839d81cca564c84d0 567 Pfam PF06580 Histidine kinase 359 438 5.2E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CO704_RS05985 b013f9619104311839d81cca564c84d0 567 Gene3D G3DSA:3.30.565.10 333 552 4.1E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05985 b013f9619104311839d81cca564c84d0 567 SUPERFAMILY SSF55781 226 351 4.36E-9 T 28-03-2018 IPR029016 GAF domain-like CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 SUPERFAMILY SSF53067 137 310 2.25E-46 T 28-03-2018 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 1.1E-95 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 Gene3D G3DSA:3.30.420.40 1 124 1.2E-37 T 28-03-2018 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 SUPERFAMILY SSF109604 313 506 2.98E-56 T 28-03-2018 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 Gene3D G3DSA:3.30.420.150 125 305 1.8E-32 T 28-03-2018 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 8.6E-97 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 SUPERFAMILY SSF53067 13 133 7.03E-36 T 28-03-2018 CO704_RS05150 4cbbaa7398b200ff7bc1db14277ae93d 513 PIRSF PIRSF001267 3 506 6.0E-202 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 Pfam PF01380 SIS domain 124 252 9.0E-27 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.6E-29 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 Gene3D G3DSA:3.40.50.10490 94 289 2.8E-38 T 28-03-2018 CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 SUPERFAMILY SSF46689 1 80 1.22E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 Gene3D G3DSA:1.10.10.10 1 93 1.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08930 cbf3ecce7e6b87a0d473b035342cd8ee 289 SUPERFAMILY SSF53697 94 277 2.6E-43 T 28-03-2018 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 Pfam PF00202 Aminotransferase class-III 21 419 2.5E-130 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 PIRSF PIRSF000521 2 130 4.6E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 PIRSF PIRSF000521 125 421 1.9E-45 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 Gene3D G3DSA:3.40.640.10 183 305 4.9E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 Gene3D G3DSA:3.90.1150.10 21 182 3.1E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 2.9E-198 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 Gene3D G3DSA:3.90.1150.10 306 421 7.5E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00520 3b096faa4356202679f774afc42024d0 421 SUPERFAMILY SSF53383 23 420 4.3E-133 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13955 140d069a944e63589d4bde34ac445071 142 Pfam PF02566 OsmC-like protein 41 138 2.6E-14 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS13955 140d069a944e63589d4bde34ac445071 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 138 1.4E-44 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CO704_RS13955 140d069a944e63589d4bde34ac445071 142 SUPERFAMILY SSF82784 6 138 1.96E-34 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS13955 140d069a944e63589d4bde34ac445071 142 Gene3D G3DSA:2.20.25.10 1 45 4.6E-17 T 28-03-2018 CO704_RS13955 140d069a944e63589d4bde34ac445071 142 Gene3D G3DSA:3.30.300.20 46 141 1.1E-20 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 SUPERFAMILY SSF52172 4 170 2.56E-27 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 PIRSF PIRSF006171 4 231 3.0E-65 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 Gene3D G3DSA:1.10.10.60 146 204 9.8E-6 T 28-03-2018 CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 Gene3D G3DSA:3.40.50.2300 5 145 1.8E-22 T 28-03-2018 CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 SMART SM00448 6 119 2.3E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 Pfam PF00072 Response regulator receiver domain 8 118 2.0E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS20540 6343649f46af60edffdd58e1eed0a386 235 Pfam PF12431 Transcriptional regulator 135 163 4.5E-5 T 28-03-2018 IPR028141 Transcriptional regulator CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 SUPERFAMILY SSF53335 1 255 2.49E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 181 7.6E-21 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 PIRSF PIRSF000398 1 256 7.2E-49 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CO704_RS12455 81b199f7f078ce1056cdf641e6bf5bf1 256 Gene3D G3DSA:3.40.50.150 1 256 1.5E-38 T 28-03-2018 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 SUPERFAMILY SSF53335 1 255 2.49E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 8.7E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 181 7.6E-21 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 PIRSF PIRSF000398 1 256 7.2E-49 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CO704_RS17025 81b199f7f078ce1056cdf641e6bf5bf1 256 Gene3D G3DSA:3.40.50.150 1 256 1.5E-38 T 28-03-2018 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 Gene3D G3DSA:3.30.360.10 131 328 6.0E-43 T 28-03-2018 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 SUPERFAMILY SSF55347 124 287 6.05E-34 T 28-03-2018 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 162 234 3.5E-7 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 6.6E-135 T 28-03-2018 IPR030827 Inositol 2-dehydrogenase CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 Gene3D G3DSA:3.40.50.720 1 130 8.5E-34 T 28-03-2018 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 4.1E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS02615 4bb1d338bc08e36aecf6c776d2edf69e 328 SUPERFAMILY SSF51735 2 143 1.06E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02425 c848f60db095dc1a70948633c5f306c6 262 Gene3D G3DSA:3.40.830.10 1 262 8.2E-85 T 28-03-2018 CO704_RS02425 c848f60db095dc1a70948633c5f306c6 262 SUPERFAMILY SSF53213 5 261 4.84E-93 T 28-03-2018 CO704_RS02425 c848f60db095dc1a70948633c5f306c6 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 261 1.1E-26 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CO704_RS02425 c848f60db095dc1a70948633c5f306c6 262 PIRSF PIRSF006157 1 262 8.6E-94 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 SUPERFAMILY SSF52833 1 84 3.81E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 2.3E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 Gene3D G3DSA:3.40.30.10 1 97 2.0E-26 T 28-03-2018 CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 Gene3D G3DSA:1.20.1050.10 98 216 3.8E-24 T 28-03-2018 CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 SUPERFAMILY SSF47616 81 215 7.52E-22 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS22505 05ac4a4447981ad49310a4170cfddbd3 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 205 7.8E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS17290 a8d556943598f45af9716a35a6ec4b5c 262 Pfam PF00795 Carbon-nitrogen hydrolase 15 246 4.7E-37 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS17290 a8d556943598f45af9716a35a6ec4b5c 262 SUPERFAMILY SSF56317 1 257 2.49E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS17290 a8d556943598f45af9716a35a6ec4b5c 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CO704_RS17290 a8d556943598f45af9716a35a6ec4b5c 262 Gene3D G3DSA:3.60.110.10 1 262 1.5E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 Pfam PF00005 ABC transporter 17 159 4.6E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 Gene3D G3DSA:3.40.50.300 1 251 2.8E-76 T 28-03-2018 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 Pfam PF08402 TOBE domain 271 342 3.6E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 Gene3D G3DSA:2.40.50.140 283 334 1.5E-8 T 28-03-2018 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 SUPERFAMILY SSF52540 1 240 2.34E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 SUPERFAMILY SSF50331 234 345 5.1E-21 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 Gene3D G3DSA:2.40.50.100 252 282 2.5E-6 T 28-03-2018 CO704_RS11610 ceca80a6b616c64657376f5237e7fe9a 357 SMART SM00382 26 209 2.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05045 ed03477b86ae52635627a76108daf261 232 Gene3D G3DSA:3.40.1800.10 141 226 5.5E-8 T 28-03-2018 CO704_RS05045 ed03477b86ae52635627a76108daf261 232 SMART SM00507 153 210 3.0E-5 T 28-03-2018 IPR003615 HNH nuclease CO704_RS05045 ed03477b86ae52635627a76108daf261 232 Pfam PF01844 HNH endonuclease 166 214 8.2E-8 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 SUPERFAMILY SSF54197 3 177 8.29E-73 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 PIRSF PIRSF000808 1 341 9.6E-127 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 Gene3D G3DSA:3.30.428.10 45 164 3.5E-51 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 345 1.6E-70 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 Gene3D G3DSA:3.30.428.10 165 345 1.7E-58 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 4.3E-71 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 2.6E-206 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 SUPERFAMILY SSF54197 179 344 9.87E-58 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS16545 b72f2a0b5e772e870001de04a5f03c2b 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 Pfam PF00210 Ferritin-like domain 8 143 2.4E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PIRSF PIRSF002560 1 157 5.6E-71 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 44 64 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 3 22 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 65 85 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 23 43 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 86 106 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 128 149 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 PRINTS PR00601 Bacterioferritin signature 107 127 3.5E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 Gene3D G3DSA:1.20.1260.10 2 153 6.8E-40 T 28-03-2018 IPR012347 Ferritin-related CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 SUPERFAMILY SSF47240 1 156 2.08E-53 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS01080 852b2d4e8338e8e6e9a8c04ce37c35a7 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 3.4E-83 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 SUPERFAMILY SSF52467 189 362 1.96E-63 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 SUPERFAMILY SSF52518 371 567 1.52E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 7.2E-46 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Gene3D G3DSA:3.40.50.1220 201 354 6.8E-53 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.4E-56 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Gene3D G3DSA:3.40.50.970 1 200 3.3E-64 T 28-03-2018 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.0E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 Gene3D G3DSA:3.40.50.970 355 558 2.6E-50 T 28-03-2018 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.1E-276 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS19700 cab13d723d69b88b37af49f0c0551502 574 SUPERFAMILY SSF52518 2 176 3.16E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS16225 64d3bfe53e1f12e85946e77de7b892d4 243 Gene3D G3DSA:1.10.3720.10 4 243 7.5E-29 T 28-03-2018 CO704_RS16225 64d3bfe53e1f12e85946e77de7b892d4 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 236 1.5E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS16225 64d3bfe53e1f12e85946e77de7b892d4 243 SUPERFAMILY SSF161098 45 233 1.96E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 SUPERFAMILY SSF58104 232 513 2.49E-68 T 28-03-2018 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 Gene3D G3DSA:1.20.120.30 24 186 3.9E-12 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 Gene3D G3DSA:1.10.287.950 316 514 1.1E-45 T 28-03-2018 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 183 1.0E-18 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 Gene3D G3DSA:1.10.287.1060 210 315 0.15 T 28-03-2018 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 SMART SM00304 212 264 2.1E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.2E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.2E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.2E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.2E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.2E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 SMART SM00283 265 512 9.5E-77 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS07975 669a91320e03b06dffcf4ac49f99d80d 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 479 1.5E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS21910 e14f03bb19291cbaef3bbee3b0bb5406 307 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 18 289 1.0E-99 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 CO704_RS21910 e14f03bb19291cbaef3bbee3b0bb5406 307 Pfam PF11920 Protein of unknown function (DUF3438) 14 295 2.1E-112 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 317 332 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 332 355 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 396 412 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 251 273 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 24 41 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 274 296 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 PRINTS PR01007 Flagellar hook-length control protein signature 299 317 9.8E-57 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CO704_RS08415 21a6200f014ce7efc34b86b28e09a3cb 413 Pfam PF02120 Flagellar hook-length control protein FliK 286 367 3.4E-20 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CO704_RS24085 840aacbdc7ec464401de285746f90306 149 Gene3D G3DSA:3.40.50.360 1 149 6.6E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS24085 840aacbdc7ec464401de285746f90306 149 PRINTS PR00369 Flavodoxin signature 5 18 2.4E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS24085 840aacbdc7ec464401de285746f90306 149 PRINTS PR00369 Flavodoxin signature 51 62 2.4E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS24085 840aacbdc7ec464401de285746f90306 149 PRINTS PR00369 Flavodoxin signature 106 125 2.4E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS24085 840aacbdc7ec464401de285746f90306 149 PRINTS PR00369 Flavodoxin signature 82 92 2.4E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS24085 840aacbdc7ec464401de285746f90306 149 Pfam PF00258 Flavodoxin 7 138 1.4E-23 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS24085 840aacbdc7ec464401de285746f90306 149 SUPERFAMILY SSF52218 1 146 1.44E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 Gene3D G3DSA:1.10.10.60 270 320 1.6E-14 T 28-03-2018 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 Gene3D G3DSA:2.60.120.280 35 199 1.3E-10 T 28-03-2018 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 Gene3D G3DSA:1.10.10.60 209 269 3.7E-13 T 28-03-2018 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 Pfam PF12833 Helix-turn-helix domain 236 314 5.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 313 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 297 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 Pfam PF12852 Cupin 17 197 2.4E-34 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 SMART SM00342 230 313 1.2E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 SUPERFAMILY SSF46689 213 264 2.12E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04035 7a06600d7ebe7bcf1b5c3d1a685108e6 321 SUPERFAMILY SSF46689 266 315 2.15E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13775 9cc09b3474a6ef0e65fe880f2d827542 153 Pfam PF00877 NlpC/P60 family 46 152 1.4E-28 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CO704_RS13775 9cc09b3474a6ef0e65fe880f2d827542 153 SUPERFAMILY SSF54001 32 153 1.54E-39 T 28-03-2018 CO704_RS13775 9cc09b3474a6ef0e65fe880f2d827542 153 Gene3D G3DSA:3.90.1720.10 32 153 1.0E-34 T 28-03-2018 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:2.40.240.10 465 548 3.4E-33 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 SUPERFAMILY SSF52374 10 337 1.1E-101 T 28-03-2018 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:1.10.1160.10 261 338 5.8E-35 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:3.40.50.620 7 41 0.0025 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:3.40.50.620 42 152 9.5E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:3.40.50.620 153 260 9.7E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 SUPERFAMILY SSF50715 340 548 1.36E-81 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 552 0.0 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.7E-124 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Gene3D G3DSA:2.40.240.10 344 464 2.8E-51 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.302 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CO704_RS17085 31a6b7d570f303a38c347fb5ff43a9ce 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.6E-67 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS05920 800b509d0ef0559b7642a1b5c3d98718 118 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 118 2.0E-36 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CO704_RS05920 800b509d0ef0559b7642a1b5c3d98718 118 SUPERFAMILY SSF46955 2 50 8.88E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS05920 800b509d0ef0559b7642a1b5c3d98718 118 Pfam PF07037 Putative transcription regulator (DUF1323) 6 116 8.7E-48 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CO704_RS05920 800b509d0ef0559b7642a1b5c3d98718 118 Gene3D G3DSA:1.10.10.10 3 62 1.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19105 21dc901d90b139831cad793cd8bb012f 391 Gene3D G3DSA:1.20.1250.20 191 385 8.8E-26 T 28-03-2018 CO704_RS19105 21dc901d90b139831cad793cd8bb012f 391 Gene3D G3DSA:1.20.1250.20 3 190 6.4E-29 T 28-03-2018 CO704_RS19105 21dc901d90b139831cad793cd8bb012f 391 SUPERFAMILY SSF103473 3 382 2.22E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS19105 21dc901d90b139831cad793cd8bb012f 391 Pfam PF07690 Major Facilitator Superfamily 9 319 6.3E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 ProSitePatterns PS00164 Enolase signature. 339 352 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 SUPERFAMILY SSF54826 3 138 5.11E-56 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 Hamap MF_00318 Enolase [eno]. 2 416 44.043 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PIRSF PIRSF001400 1 429 8.4E-190 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 1.8E-202 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 Gene3D G3DSA:3.20.20.120 128 432 6.4E-102 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 SMART SM01193 4 134 2.3E-93 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 SUPERFAMILY SSF51604 143 426 4.95E-125 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.5E-136 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 SMART SM01192 143 433 1.9E-207 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 Gene3D G3DSA:3.30.390.10 3 127 1.6E-51 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS03560 2bddd4c72b44d3af80c95a75a9d58bc9 434 Pfam PF03952 Enolase, N-terminal domain 4 134 4.9E-58 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 Pfam PF01418 Helix-turn-helix domain, rpiR family 131 200 4.2E-14 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 SUPERFAMILY SSF46689 1 73 7.17E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 SUPERFAMILY SSF53697 217 363 5.34E-10 T 28-03-2018 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 SUPERFAMILY SSF46689 129 200 2.69E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 Gene3D G3DSA:3.40.50.10490 238 359 1.1E-7 T 28-03-2018 CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 Gene3D G3DSA:1.10.10.10 127 237 5.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13080 873faea3af3104155dadfc6a8d97a1cd 371 Gene3D G3DSA:1.10.10.10 2 94 5.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 SUPERFAMILY SSF81345 4 318 6.28E-59 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 Gene3D G3DSA:1.10.3470.10 1 326 1.5E-42 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 Gene3D G3DSA:1.10.3470.10 328 645 5.6E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 SUPERFAMILY SSF81345 339 644 3.66E-66 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 Pfam PF01032 FecCD transport family 8 316 4.8E-66 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS14805 fc8db2bf1fc970b29c5d4a7272dfd6eb 645 Pfam PF01032 FecCD transport family 372 644 1.7E-68 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 151 179 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 5.4E-49 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 SUPERFAMILY SSF56796 9 356 2.09E-59 T 28-03-2018 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 Gene3D G3DSA:1.20.1090.10 162 359 1.5E-29 T 28-03-2018 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 PIRSF PIRSF000112 2 359 3.4E-118 T 28-03-2018 CO704_RS05230 414bec8b64cbf9ce7073ae2965fdccb6 359 Gene3D G3DSA:3.40.50.1970 2 161 3.3E-18 T 28-03-2018 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 Gene3D G3DSA:3.40.50.2300 1 136 1.5E-33 T 28-03-2018 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 Pfam PF00072 Response regulator receiver domain 5 115 3.6E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 Gene3D G3DSA:1.10.10.10 137 239 2.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 SUPERFAMILY SSF52172 2 124 6.69E-35 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 8.3E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 SMART SM00448 3 115 1.9E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 SUPERFAMILY SSF46894 133 233 1.53E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS22450 007cd9a6423a19b8b3d0581947bdc477 244 SMART SM00862 156 232 6.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 Gene3D G3DSA:1.20.91.10 227 314 9.6E-12 T 28-03-2018 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 2.0E-90 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 SUPERFAMILY SSF51735 402 530 2.91E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 Gene3D G3DSA:3.40.50.720 398 561 1.4E-17 T 28-03-2018 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 3.3E-66 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.461 T 28-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 CO704_RS01010 e96cd25067683a4d591d7353c7eb6d0f 601 Pfam PF02254 TrkA-N domain 403 513 3.4E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 2.3E-180 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 1.5E-190 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.678 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 Gene3D G3DSA:3.20.20.105 1 368 1.5E-159 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.8E-93 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS18355 26eff1dd1bca3eb94326e9bb17ff8dd0 375 SUPERFAMILY SSF51713 2 364 1.83E-162 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CO704_RS19580 094440548ee62feecf24fde3f21802eb 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 31.796 T 28-03-2018 IPR009777 Cell division protein ZapD CO704_RS19580 094440548ee62feecf24fde3f21802eb 247 Pfam PF07072 Cell division protein 19 225 1.5E-75 T 28-03-2018 IPR009777 Cell division protein ZapD CO704_RS19580 094440548ee62feecf24fde3f21802eb 247 Gene3D G3DSA:2.60.440.10 175 247 1.5E-26 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain CO704_RS19580 094440548ee62feecf24fde3f21802eb 247 SUPERFAMILY SSF160950 4 247 3.14E-89 T 28-03-2018 IPR009777 Cell division protein ZapD CO704_RS19580 094440548ee62feecf24fde3f21802eb 247 Gene3D G3DSA:1.10.3900.10 13 174 3.5E-61 T 28-03-2018 CO704_RS17230 22854d7001acccff6fdce515fd61b150 105 Gene3D G3DSA:3.30.460.10 1 105 2.6E-34 T 28-03-2018 CO704_RS17230 22854d7001acccff6fdce515fd61b150 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 6.6E-28 T 28-03-2018 CO704_RS17230 22854d7001acccff6fdce515fd61b150 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.312 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CO704_RS17230 22854d7001acccff6fdce515fd61b150 105 SUPERFAMILY SSF81301 4 105 1.21E-36 T 28-03-2018 CO704_RS17230 22854d7001acccff6fdce515fd61b150 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 7.2E-37 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CO704_RS02445 679a069ee1e27c10ae9df109b6d2f73e 210 Pfam PF00293 NUDIX domain 59 176 3.0E-11 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS02445 679a069ee1e27c10ae9df109b6d2f73e 210 Gene3D G3DSA:3.90.79.10 1 209 3.3E-44 T 28-03-2018 CO704_RS02445 679a069ee1e27c10ae9df109b6d2f73e 210 SUPERFAMILY SSF55811 7 208 5.69E-51 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS02445 679a069ee1e27c10ae9df109b6d2f73e 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS02445 679a069ee1e27c10ae9df109b6d2f73e 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 1.9E-80 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CO704_RS04335 17c354b0e5fe5ed59df340e80aff27d5 468 Pfam PF02321 Outer membrane efflux protein 272 445 8.8E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS04335 17c354b0e5fe5ed59df340e80aff27d5 468 Pfam PF02321 Outer membrane efflux protein 61 242 1.8E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS04335 17c354b0e5fe5ed59df340e80aff27d5 468 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 59 463 1.7E-109 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CO704_RS04335 17c354b0e5fe5ed59df340e80aff27d5 468 SUPERFAMILY SSF56954 7 450 2.75E-66 T 28-03-2018 CO704_RS04335 17c354b0e5fe5ed59df340e80aff27d5 468 Gene3D G3DSA:1.20.1600.10 54 458 2.6E-55 T 28-03-2018 CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 1.6E-41 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 Gene3D G3DSA:1.20.1440.100 18 78 4.7E-21 T 28-03-2018 CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 4.7E-24 T 28-03-2018 CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 SUPERFAMILY SSF56784 4 201 5.38E-26 T 28-03-2018 IPR023214 HAD-like domain CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 Gene3D G3DSA:3.40.50.1000 79 219 1.0E-10 T 28-03-2018 IPR023214 HAD-like domain CO704_RS02515 61caa7d9de410d78fef61b737548d497 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 7.5E-28 T 28-03-2018 CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 Pfam PF03797 Autotransporter beta-domain 1083 1337 4.0E-45 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 SUPERFAMILY SSF51126 419 647 2.57E-25 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 SUPERFAMILY SSF51126 679 1000 2.57E-25 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 Gene3D G3DSA:2.160.20.20 713 1004 1.7E-42 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 Pfam PF03212 Pertactin 885 998 5.6E-8 T 28-03-2018 IPR004899 Pertactin, central region CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 Gene3D G3DSA:2.40.128.130 1037 1359 5.1E-48 T 28-03-2018 CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 897 1359 5.2E-110 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 SMART SM00869 1080 1348 3.2E-42 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS04030 cfbb8923dc253abc73deb9cbe827a7d3 1359 SUPERFAMILY SSF103515 1047 1359 6.41E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 SUPERFAMILY SSF52540 9 228 4.82E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 Gene3D G3DSA:3.40.50.300 266 494 1.1E-32 T 28-03-2018 CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 Gene3D G3DSA:3.40.50.300 3 245 2.2E-49 T 28-03-2018 CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 SMART SM00382 31 221 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 SMART SM00382 282 478 1.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 SUPERFAMILY SSF52540 270 485 5.98E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 Pfam PF00005 ABC transporter 22 173 1.4E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05225 4d8ba2f977227781b3a9df8af68bdfb9 501 Pfam PF00005 ABC transporter 273 427 7.3E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 PIRSF PIRSF006621 2 326 8.9E-71 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 329 7.9E-170 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 330 53.324 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 Pfam PF01207 Dihydrouridine synthase (Dus) 17 324 1.5E-96 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 SUPERFAMILY SSF51395 13 325 4.4E-73 T 28-03-2018 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS22625 5820a04715dc9d815f71c196057bda8e 334 Gene3D G3DSA:3.20.20.70 11 252 1.0E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS15310 d8ab27a82fe8f8fdc916a5f11fa62f89 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 28-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 CO704_RS15310 d8ab27a82fe8f8fdc916a5f11fa62f89 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 8.7E-42 T 28-03-2018 IPR006214 Bax inhibitor 1-related CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 Pfam PF00343 Carbohydrate phosphorylase 93 797 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 797 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 PIRSF PIRSF000460 1 800 4.0E-202 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 SUPERFAMILY SSF53756 7 798 2.35E-290 T 28-03-2018 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 641 653 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 Gene3D G3DSA:3.40.50.2000 8 462 5.8E-172 T 28-03-2018 CO704_RS00700 aa729af6d21b93e36e0b408f663618fa 800 Gene3D G3DSA:3.40.50.2000 463 783 2.8E-129 T 28-03-2018 CO704_RS07145 b068ed6a7103627b8cc5acd39c0805fa 306 SUPERFAMILY SSF161098 91 289 1.24E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07145 b068ed6a7103627b8cc5acd39c0805fa 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 3.3E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07145 b068ed6a7103627b8cc5acd39c0805fa 306 Gene3D G3DSA:1.10.3720.10 3 293 1.1E-46 T 28-03-2018 CO704_RS03720 76158987360db7b63c40e890231757bf 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.2 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CO704_RS03720 76158987360db7b63c40e890231757bf 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 1.7E-93 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CO704_RS03720 76158987360db7b63c40e890231757bf 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CO704_RS03720 76158987360db7b63c40e890231757bf 208 Gene3D G3DSA:3.40.50.150 9 206 2.0E-38 T 28-03-2018 CO704_RS03720 76158987360db7b63c40e890231757bf 208 SUPERFAMILY SSF53335 11 204 1.24E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS03720 76158987360db7b63c40e890231757bf 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 205 2.7E-78 T 28-03-2018 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 PIRSF PIRSF036684 1 758 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 SUPERFAMILY SSF53223 10 161 1.51E-53 T 28-03-2018 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Gene3D G3DSA:3.40.50.10750 573 727 7.4E-49 T 28-03-2018 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 SMART SM00919 163 401 1.5E-140 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.0E-98 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.8E-28 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 SMART SM01274 18 151 3.5E-81 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Gene3D G3DSA:3.40.50.10380 5 160 7.4E-36 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 SUPERFAMILY SSF51735 163 453 3.83E-87 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 2.1E-19 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 SUPERFAMILY SSF53659 430 754 1.15E-88 T 28-03-2018 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CO704_RS05755 f5af349d8e2ef68df41f32ea4290b5ad 759 Gene3D G3DSA:3.40.50.720 161 448 5.2E-85 T 28-03-2018 CO704_RS12825 d524305d3b097003db4867e96196ea5d 379 SUPERFAMILY SSF51419 21 239 1.16E-28 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS12825 d524305d3b097003db4867e96196ea5d 379 SMART SM01119 257 364 8.3E-43 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CO704_RS12825 d524305d3b097003db4867e96196ea5d 379 Gene3D G3DSA:3.20.20.10 18 239 4.1E-34 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS12825 d524305d3b097003db4867e96196ea5d 379 Pfam PF14031 Putative serine dehydratase domain 257 362 4.8E-22 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CO704_RS12825 d524305d3b097003db4867e96196ea5d 379 Pfam PF01168 Alanine racemase, N-terminal domain 18 240 2.1E-26 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS05870 45c728b887829d933795aea449693a64 309 SUPERFAMILY SSF46785 3 112 3.52E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05870 45c728b887829d933795aea449693a64 309 SUPERFAMILY SSF53850 90 294 3.35E-43 T 28-03-2018 CO704_RS05870 45c728b887829d933795aea449693a64 309 Gene3D G3DSA:3.40.190.10 182 263 1.9E-19 T 28-03-2018 CO704_RS05870 45c728b887829d933795aea449693a64 309 Gene3D G3DSA:1.10.10.10 1 83 4.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05870 45c728b887829d933795aea449693a64 309 Pfam PF03466 LysR substrate binding domain 90 293 8.3E-46 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS05870 45c728b887829d933795aea449693a64 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05870 45c728b887829d933795aea449693a64 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05870 45c728b887829d933795aea449693a64 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05870 45c728b887829d933795aea449693a64 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS05870 45c728b887829d933795aea449693a64 309 Gene3D G3DSA:3.40.190.10 90 181 2.2E-25 T 28-03-2018 CO704_RS21345 c341bd206ba295ac276de2a4360e3bfc 382 SUPERFAMILY SSF56601 26 381 4.8E-104 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS21345 c341bd206ba295ac276de2a4360e3bfc 382 ProSitePatterns PS00336 Beta-lactamase class-C active site. 81 88 - T 28-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 CO704_RS21345 c341bd206ba295ac276de2a4360e3bfc 382 Gene3D G3DSA:3.40.710.10 20 382 7.2E-76 T 28-03-2018 CO704_RS21345 c341bd206ba295ac276de2a4360e3bfc 382 Pfam PF00144 Beta-lactamase 33 381 2.5E-85 T 28-03-2018 IPR001466 Beta-lactamase-related CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 61 79 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 265 280 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 27 43 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 121 133 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 248 263 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 190 217 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 338 351 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 155 166 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 PRINTS PR00992 Alanine racemase signature 286 303 1.4E-73 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 TIGRFAM TIGR00492 alr: alanine racemase 4 354 5.6E-124 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 SUPERFAMILY SSF51419 9 233 3.74E-63 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 SMART SM01005 232 356 3.5E-61 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 Gene3D G3DSA:2.40.37.10 202 356 5.4E-60 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 353 2.7E-40 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 SUPERFAMILY SSF50621 228 354 3.24E-44 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 3.3E-64 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 Gene3D G3DSA:3.20.20.10 7 201 2.3E-37 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS09280 7f65b54c536c357c4d7cbc3215253a90 356 Hamap MF_01201 Alanine racemase. 2 356 33.45 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS14530 aeab069d9bf70645b57a88f67362df84 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 2.1E-141 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CO704_RS14530 aeab069d9bf70645b57a88f67362df84 340 Gene3D G3DSA:3.30.160.60 303 337 3.5E-16 T 28-03-2018 CO704_RS14530 aeab069d9bf70645b57a88f67362df84 340 Pfam PF02618 YceG-like family 43 328 9.3E-81 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CO704_RS14530 aeab069d9bf70645b57a88f67362df84 340 Gene3D G3DSA:3.30.160.60 74 108 2.7E-17 T 28-03-2018 CO704_RS14530 aeab069d9bf70645b57a88f67362df84 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 332 33.547 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CO704_RS18880 ece2f960e418a35be60096d545f5c4ca 310 Pfam PF00589 Phage integrase family 125 292 1.5E-29 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS18880 ece2f960e418a35be60096d545f5c4ca 310 Gene3D G3DSA:1.10.150.130 14 122 9.4E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS18880 ece2f960e418a35be60096d545f5c4ca 310 Gene3D G3DSA:1.10.443.10 123 300 3.8E-39 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS18880 ece2f960e418a35be60096d545f5c4ca 310 SUPERFAMILY SSF56349 22 292 9.12E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 8.6E-22 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Pfam PF00750 tRNA synthetases class I (R) 96 446 6.5E-170 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 SMART SM00836 460 577 3.3E-32 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 SUPERFAMILY SSF47323 454 577 3.47E-33 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 SUPERFAMILY SSF55190 2 97 3.4E-23 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.823 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 SUPERFAMILY SSF52374 111 454 7.39E-98 T 28-03-2018 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.3E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.3E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.3E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.3E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Pfam PF05746 DALR anticodon binding domain 460 577 1.0E-32 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Gene3D G3DSA:1.10.730.10 441 577 1.7E-41 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Gene3D G3DSA:3.40.50.620 107 440 4.2E-61 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 SMART SM01016 5 87 7.1E-30 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 2.8E-208 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS08790 aedaf561cccfefa79d3ec0395d614aad 577 Gene3D G3DSA:3.30.1360.70 1 106 6.5E-29 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 9 255 4.5E-62 T 28-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 184 206 5.8E-29 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 82 101 5.8E-29 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 206 225 5.8E-29 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 5.8E-29 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS16125 a98d500b38298e124bf03e2da4b01040 269 Pfam PF01311 Bacterial export proteins, family 1 16 249 1.1E-40 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS13355 db9f21212b5cf7e6ca7b07f9f0719c2f 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.8E-60 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CO704_RS13355 db9f21212b5cf7e6ca7b07f9f0719c2f 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.538 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CO704_RS13355 db9f21212b5cf7e6ca7b07f9f0719c2f 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 4.9E-90 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CO704_RS13355 db9f21212b5cf7e6ca7b07f9f0719c2f 193 PIRSF PIRSF006102 1 193 1.4E-58 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 PIRSF PIRSF002741 1 528 1.4E-120 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 SUPERFAMILY SSF53850 37 525 1.01E-129 T 28-03-2018 CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 Gene3D G3DSA:3.40.190.10 199 292 1.2E-27 T 28-03-2018 CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 Gene3D G3DSA:3.10.105.10 293 499 7.3E-49 T 28-03-2018 CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 447 9.9E-89 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS08650 2a7937b2bfbc41158ef931b6f9957bd5 529 Gene3D G3DSA:3.90.76.10 53 198 1.5E-34 T 28-03-2018 CO704_RS07165 da31509c0f454ef28111c80336b5ad3f 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 6 121 7.6E-36 T 28-03-2018 IPR020359 Biofilm regulator BssR CO704_RS07165 da31509c0f454ef28111c80336b5ad3f 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 9 122 5.0E-21 T 28-03-2018 IPR020359 Biofilm regulator BssR CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 4.7E-27 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 SUPERFAMILY SSF88659 121 182 4.14E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 Pfam PF08281 Sigma-70, region 4 127 178 3.7E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 Gene3D G3DSA:1.10.1740.10 2 99 2.1E-23 T 28-03-2018 CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 Pfam PF04542 Sigma-70 region 2 27 94 5.0E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 Gene3D G3DSA:1.10.10.10 100 183 8.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11425 3cc5a3b71cb7ed1c176f8f50f026652c 184 SUPERFAMILY SSF88946 9 113 2.75E-25 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Gene3D G3DSA:3.60.15.10 1 247 7.0E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 SUPERFAMILY SSF52218 251 396 5.03E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Pfam PF00258 Flavodoxin 256 387 3.1E-11 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Gene3D G3DSA:3.40.50.360 253 395 1.3E-19 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 SUPERFAMILY SSF57802 427 477 1.3E-16 T 28-03-2018 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Gene3D G3DSA:2.20.28.10 427 478 1.6E-17 T 28-03-2018 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 PRINTS PR00163 Rubredoxin signature 427 443 9.1E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 PRINTS PR00163 Rubredoxin signature 457 473 9.1E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 477 89.393 T 28-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Pfam PF00753 Metallo-beta-lactamase superfamily 34 172 1.1E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 Pfam PF00301 Rubredoxin 428 473 1.3E-18 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 SUPERFAMILY SSF56281 8 285 1.22E-50 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 PIRSF PIRSF005243 1 400 1.6E-160 T 28-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CO704_RS05240 8b1f5e8c3f8249ce1cfdba37dc9ec5e8 481 SMART SM00849 34 210 1.1E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 SUPERFAMILY SSF74650 4 343 4.65E-105 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 28-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 9.6E-139 T 28-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 Gene3D G3DSA:2.70.98.10 5 345 1.9E-105 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 Pfam PF01263 Aldose 1-epimerase 17 342 1.3E-85 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CO704_RS16555 a073794b9b74b343b24fa5fd1686c623 346 PIRSF PIRSF005096 1 345 5.5E-120 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PIRSF PIRSF002111 1 534 5.7E-221 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 88 174 4.85E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 1 92 1.5E-7 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.1E-239 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 103 171 5.5E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 449 520 5.2E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 190 260 2.8E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 19 87 1.2E-4 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 275 347 2.2E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SMART SM00316 362 434 3.4E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 429 536 2.98E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 451 550 9.5E-19 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.4E-99 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 96 177 3.4E-7 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 28-03-2018 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 255 371 2.77E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 1 112 3.69E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 SUPERFAMILY SSF50249 362 443 1.63E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 103 171 4.1E-9 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 449 520 6.9E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS15585 86a0fbc68889e9e34822c8e833ff4747 557 Pfam PF00575 S1 RNA binding domain 20 78 2.1E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Gene3D G3DSA:3.30.980.10 147 222 1.1E-16 T 28-03-2018 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Gene3D G3DSA:3.30.980.10 65 146 9.2E-21 T 28-03-2018 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 5.1E-14 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 SUPERFAMILY SSF55681 243 525 1.04E-96 T 28-03-2018 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 SUPERFAMILY SSF55186 64 241 6.8E-64 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.6E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.6E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.6E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.6E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.6E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Gene3D G3DSA:3.30.930.10 223 531 2.2E-120 T 28-03-2018 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 SUPERFAMILY SSF52954 530 636 1.42E-33 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.018 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 3.3E-245 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 SUPERFAMILY SSF81271 3 61 5.23E-17 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 SMART SM00863 170 219 2.9E-19 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 3.4E-50 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Gene3D G3DSA:3.40.50.800 532 642 8.7E-30 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Pfam PF03129 Anticodon binding domain 541 630 5.3E-23 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Pfam PF02824 TGS domain 4 61 1.9E-12 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CO704_RS13830 3b297563de33958947ebfc0f47c91f32 642 Gene3D G3DSA:3.10.20.30 1 64 2.2E-20 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 Gene3D G3DSA:3.40.190.10 25 149 1.8E-23 T 28-03-2018 CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 261 3.7E-47 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 Gene3D G3DSA:3.40.190.10 150 264 4.1E-9 T 28-03-2018 CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 SMART SM00062 35 264 1.6E-35 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS08250 c0a7d777d0f664c036801641d8ee2e6b 275 SUPERFAMILY SSF53850 9 262 7.39E-45 T 28-03-2018 CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 Pfam PF02810 SEC-C motif 3 19 3.0E-7 T 28-03-2018 IPR004027 SEC-C motif CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 Pfam PF02810 SEC-C motif 134 151 1.4E-10 T 28-03-2018 IPR004027 SEC-C motif CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 SUPERFAMILY SSF103642 132 151 9.32E-8 T 28-03-2018 CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 SUPERFAMILY SSF54427 25 128 4.38E-34 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 26.89 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 Gene3D G3DSA:3.10.450.50 3 129 2.7E-43 T 28-03-2018 CO704_RS09815 5d5b3980d88c1812141fc94a9ea79526 151 Gene3D G3DSA:3.10.450.50 136 151 0.13 T 28-03-2018 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 24 304 39.005 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 Pfam PF01039 Carboxyl transferase domain 122 309 3.6E-18 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 Gene3D G3DSA:3.90.226.10 36 313 3.5E-73 T 28-03-2018 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 SUPERFAMILY SSF52096 48 309 6.53E-91 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 24 306 2.3E-151 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 152 166 4.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 186 204 4.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 263 4.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 223 240 4.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS06355 4b75f045ec064b4fb1f99f71a381e8f6 329 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 274 283 4.6E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 Pfam PF01479 S4 domain 18 65 6.3E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 Gene3D G3DSA:3.30.2350.10 83 316 6.4E-68 T 28-03-2018 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 3.9E-109 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 SUPERFAMILY SSF55120 77 322 5.35E-78 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 5.2E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 SMART SM00363 18 83 1.8E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 Gene3D G3DSA:3.10.290.10 2 76 5.6E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS04465 3d4221be2850ea1536d07ff7611bc596 326 SUPERFAMILY SSF55174 17 69 3.03E-11 T 28-03-2018 CO704_RS14125 b97c86c7fad3327acca0a51743db690f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 224 9.0E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14125 b97c86c7fad3327acca0a51743db690f 231 Gene3D G3DSA:1.10.3720.10 22 224 6.9E-35 T 28-03-2018 CO704_RS14125 b97c86c7fad3327acca0a51743db690f 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 114 6.4E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS14125 b97c86c7fad3327acca0a51743db690f 231 SUPERFAMILY SSF161098 27 219 3.79E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13375 92a8d710edb13d70df1a606b8d2fa65c 208 Pfam PF04205 FMN-binding domain 99 187 5.5E-18 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS13375 92a8d710edb13d70df1a606b8d2fa65c 208 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 25.293 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CO704_RS13375 92a8d710edb13d70df1a606b8d2fa65c 208 PIRSF PIRSF006091 1 203 3.2E-67 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CO704_RS13375 92a8d710edb13d70df1a606b8d2fa65c 208 SMART SM00900 99 191 7.2E-33 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CO704_RS13375 92a8d710edb13d70df1a606b8d2fa65c 208 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 191 1.3E-65 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 5.0E-68 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 SUPERFAMILY SSF56784 1 269 5.11E-77 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 Gene3D G3DSA:3.40.50.1000 1 270 2.1E-49 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 6.5E-35 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.4E-75 T 28-03-2018 IPR000150 Cof family GO:0016787 CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 28-03-2018 CO704_RS24720 b4fa6bc70acc9bd9f9a2cbbb46d055dc 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 CO704_RS01380 0074d6047bd5e661a6a734ee7f24a9df 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 470 7.5E-221 T 28-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 CO704_RS01380 0074d6047bd5e661a6a734ee7f24a9df 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS01380 0074d6047bd5e661a6a734ee7f24a9df 484 Pfam PF00474 Sodium:solute symporter family 36 432 3.3E-128 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS01380 0074d6047bd5e661a6a734ee7f24a9df 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 4.7E-103 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS01380 0074d6047bd5e661a6a734ee7f24a9df 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS18980 4154c91f15465120c350f8d63da7bdc3 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 1.7E-6 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS18980 4154c91f15465120c350f8d63da7bdc3 246 SUPERFAMILY SSF141523 42 159 5.1E-10 T 28-03-2018 CO704_RS18980 4154c91f15465120c350f8d63da7bdc3 246 Gene3D G3DSA:2.40.440.10 39 174 2.2E-7 T 28-03-2018 CO704_RS14535 b9fea65d26ad0e26a4e842dd5ba8b518 266 Gene3D G3DSA:3.20.10.10 113 258 1.5E-31 T 28-03-2018 CO704_RS14535 b9fea65d26ad0e26a4e842dd5ba8b518 266 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 2.1E-108 T 28-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CO704_RS14535 b9fea65d26ad0e26a4e842dd5ba8b518 266 SUPERFAMILY SSF56752 2 256 2.35E-64 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CO704_RS14535 b9fea65d26ad0e26a4e842dd5ba8b518 266 Pfam PF01063 Amino-transferase class IV 24 246 1.8E-45 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CO704_RS14535 b9fea65d26ad0e26a4e842dd5ba8b518 266 Gene3D G3DSA:3.30.470.10 1 111 8.6E-23 T 28-03-2018 CO704_RS03945 800b50ed9278ba023bbd98ac4a58aace 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 325 4.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS03945 800b50ed9278ba023bbd98ac4a58aace 359 SUPERFAMILY SSF161098 147 329 3.14E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS03945 800b50ed9278ba023bbd98ac4a58aace 359 Gene3D G3DSA:1.10.3720.10 105 341 5.8E-37 T 28-03-2018 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 SUPERFAMILY SSF46785 1 83 1.78E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 Pfam PF03466 LysR substrate binding domain 87 290 1.6E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.8E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 SUPERFAMILY SSF53850 88 292 3.88E-30 T 28-03-2018 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 Gene3D G3DSA:1.10.10.10 1 83 5.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 Gene3D G3DSA:3.40.190.10 178 265 2.6E-16 T 28-03-2018 CO704_RS00035 8f833fdbe9828fabad5029768c3ddc4c 297 Gene3D G3DSA:3.40.190.10 88 177 3.6E-14 T 28-03-2018 CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 PIRSF PIRSF000450 1 308 4.0E-145 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.1E-161 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 SUPERFAMILY SSF52317 17 297 6.47E-100 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.0E-130 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 Gene3D G3DSA:3.40.50.880 34 301 1.0E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-135 T 28-03-2018 CO704_RS22810 666beeaefe70b63b1eb9d9aa2c55c753 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.302 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CO704_RS23970 80b1e9086ba627dbdf63b8eda2a64fab 302 Pfam PF01553 Acyltransferase 75 214 4.0E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS23970 80b1e9086ba627dbdf63b8eda2a64fab 302 SMART SM00563 88 230 1.3E-17 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS23970 80b1e9086ba627dbdf63b8eda2a64fab 302 Gene3D G3DSA:3.40.1130.10 48 234 4.5E-21 T 28-03-2018 CO704_RS23970 80b1e9086ba627dbdf63b8eda2a64fab 302 SUPERFAMILY SSF69593 34 213 3.4E-26 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 Gene3D G3DSA:1.20.1250.20 253 504 2.2E-18 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 Gene3D G3DSA:1.20.1250.20 6 199 7.2E-25 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.0E-5 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.0E-5 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.0E-5 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.0E-5 T 28-03-2018 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 SUPERFAMILY SSF103473 8 198 2.35E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 SUPERFAMILY SSF103473 249 420 2.35E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 SUPERFAMILY SSF103473 470 494 2.35E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS12945 49924dc02c1133374adcaffb6396b001 510 Pfam PF07690 Major Facilitator Superfamily 19 410 3.7E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 Gene3D G3DSA:1.10.10.10 1 88 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 Pfam PF03466 LysR substrate binding domain 94 279 1.6E-20 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 Gene3D G3DSA:3.40.190.10 94 170 3.3E-5 T 28-03-2018 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 SUPERFAMILY SSF53850 99 280 3.98E-20 T 28-03-2018 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 SUPERFAMILY SSF46785 2 81 6.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13150 78f566bdd6e55197ea42305d69dda9ef 283 Gene3D G3DSA:3.40.190.10 171 254 3.7E-17 T 28-03-2018 CO704_RS12140 e71832ec83e17262903d48a25f6a8eb4 281 SUPERFAMILY SSF54593 1 130 6.19E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS12140 e71832ec83e17262903d48a25f6a8eb4 281 SUPERFAMILY SSF55729 138 278 5.6E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS12140 e71832ec83e17262903d48a25f6a8eb4 281 Gene3D G3DSA:3.10.180.10 1 135 4.2E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS12140 e71832ec83e17262903d48a25f6a8eb4 281 Gene3D G3DSA:3.40.630.30 137 281 2.5E-13 T 28-03-2018 CO704_RS12140 e71832ec83e17262903d48a25f6a8eb4 281 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 111 9.2E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 SUPERFAMILY SSF53748 3 383 1.53E-145 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.3E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 PIRSF PIRSF000724 1 387 4.4E-134 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 Gene3D G3DSA:3.40.50.1260 3 174 4.6E-62 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 Gene3D G3DSA:3.40.50.1260 175 371 1.1E-75 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.1E-141 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02910 cbd1ecfa686c128c6a8bad12a7430c97 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.275 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS08645 eb55d9842c6ea93f7b86846eba0311ce 383 SMART SM00283 132 379 5.6E-79 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08645 eb55d9842c6ea93f7b86846eba0311ce 383 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 190 347 2.1E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS08645 eb55d9842c6ea93f7b86846eba0311ce 383 Gene3D G3DSA:1.10.287.950 47 186 2.4E-13 T 28-03-2018 CO704_RS08645 eb55d9842c6ea93f7b86846eba0311ce 383 Gene3D G3DSA:1.10.287.950 187 383 3.3E-44 T 28-03-2018 CO704_RS08645 eb55d9842c6ea93f7b86846eba0311ce 383 SUPERFAMILY SSF58104 104 380 6.93E-67 T 28-03-2018 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 375 2.6E-49 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 2.7E-189 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 SUPERFAMILY SSF53686 4 389 1.57E-142 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 Gene3D G3DSA:3.40.50.1100 195 396 1.1E-37 T 28-03-2018 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.453 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 PIRSF PIRSF001413 1 396 1.4E-172 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10250 b361b3c12c3c18fd439b03d742b95494 396 Gene3D G3DSA:3.40.50.1100 8 194 9.4E-45 T 28-03-2018 CO704_RS19975 af03bc3ef04bcb773c3a8feaa702c3d7 228 SUPERFAMILY SSF75217 2 156 3.4E-30 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS19975 af03bc3ef04bcb773c3a8feaa702c3d7 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 225 1.2E-71 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS19975 af03bc3ef04bcb773c3a8feaa702c3d7 228 Pfam PF00588 SpoU rRNA Methylase family 4 153 2.5E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS19975 af03bc3ef04bcb773c3a8feaa702c3d7 228 Gene3D G3DSA:3.40.1280.10 2 163 2.5E-32 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS19975 af03bc3ef04bcb773c3a8feaa702c3d7 228 PIRSF PIRSF004808 1 228 1.2E-61 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS10025 e26a7bbb3a0d6337d26f8b54a04a847e 129 SUPERFAMILY SSF55166 6 122 7.32E-24 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS10025 e26a7bbb3a0d6337d26f8b54a04a847e 129 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 56 122 6.8E-14 T 28-03-2018 CO704_RS10025 e26a7bbb3a0d6337d26f8b54a04a847e 129 Gene3D G3DSA:3.30.1380.10 1 122 1.9E-19 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 SUPERFAMILY SSF46785 20 98 1.59E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 Gene3D G3DSA:3.40.190.10 109 198 1.9E-9 T 28-03-2018 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 2.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 2.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 5.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 Gene3D G3DSA:3.40.190.10 199 282 5.1E-6 T 28-03-2018 CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 Gene3D G3DSA:1.10.10.10 18 100 1.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 Pfam PF03466 LysR substrate binding domain 112 298 1.7E-15 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS19705 6bf38d20f644d789006296cdd011edbd 314 SUPERFAMILY SSF53850 105 308 1.14E-30 T 28-03-2018 CO704_RS00260 0f79d504c74fbaa3195409aa0768d3c0 57 Pfam PF06568 Domain of unknown function (DUF1127) 19 53 4.8E-11 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 CO704_RS06205 c14032f3ddde935e4f6639f2164b39e5 159 SUPERFAMILY SSF82093 30 143 4.45E-39 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CO704_RS06205 c14032f3ddde935e4f6639f2164b39e5 159 Gene3D G3DSA:2.40.50.140 27 131 3.1E-31 T 28-03-2018 CO704_RS06205 c14032f3ddde935e4f6639f2164b39e5 159 Pfam PF03100 CcmE 4 137 8.0E-43 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CO704_RS06205 c14032f3ddde935e4f6639f2164b39e5 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.748 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 2.3E-134 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 8.5E-45 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 SUPERFAMILY SSF51735 1 306 1.42E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 Gene3D G3DSA:3.90.25.10 183 310 1.1E-17 T 28-03-2018 CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 48.907 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CO704_RS23745 7ee8baecd0cd28f7b78379daa4a92c4c 310 Gene3D G3DSA:3.40.50.720 1 182 1.4E-22 T 28-03-2018 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 SUPERFAMILY SSF53822 61 334 3.03E-73 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS03300 f946091f36f197301695a8d48aef5521 343 SMART SM00354 1 71 5.7E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.6E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 SUPERFAMILY SSF47413 1 59 2.61E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 Gene3D G3DSA:3.40.50.2300 176 313 1.7E-39 T 28-03-2018 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 Gene3D G3DSA:3.40.50.2300 55 175 4.2E-30 T 28-03-2018 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.3E-30 T 28-03-2018 CO704_RS03300 f946091f36f197301695a8d48aef5521 343 Gene3D G3DSA:1.10.260.40 2 54 3.3E-23 T 28-03-2018 CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 Gene3D G3DSA:1.10.10.10 4 91 1.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 Pfam PF03466 LysR substrate binding domain 99 295 3.9E-20 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 Gene3D G3DSA:3.40.190.10 181 262 2.9E-7 T 28-03-2018 CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.8E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 SUPERFAMILY SSF46785 9 117 8.16E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 SUPERFAMILY SSF53850 98 297 3.26E-22 T 28-03-2018 CO704_RS24905 2bae6c3389f92d68985d44ac9571de8a 299 Gene3D G3DSA:3.40.190.10 96 180 7.9E-7 T 28-03-2018 CO704_RS20235 d51286d6847b0caeba8b02fe4a6ae454 142 Gene3D G3DSA:2.20.25.10 4 47 1.1E-19 T 28-03-2018 CO704_RS20235 d51286d6847b0caeba8b02fe4a6ae454 142 Pfam PF02566 OsmC-like protein 44 138 2.8E-14 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS20235 d51286d6847b0caeba8b02fe4a6ae454 142 Gene3D G3DSA:3.30.300.20 48 142 1.3E-20 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS20235 d51286d6847b0caeba8b02fe4a6ae454 142 SUPERFAMILY SSF82784 1 140 5.76E-43 T 28-03-2018 IPR003718 OsmC/Ohr family CO704_RS20235 d51286d6847b0caeba8b02fe4a6ae454 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.2E-53 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CO704_RS01860 2b38d3055b522ec9abaed04c92caaf6e 174 Gene3D G3DSA:3.30.1050.10 16 140 3.2E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS01860 2b38d3055b522ec9abaed04c92caaf6e 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 2.1E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS01860 2b38d3055b522ec9abaed04c92caaf6e 174 SUPERFAMILY SSF55718 42 138 5.42E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CO704_RS01860 2b38d3055b522ec9abaed04c92caaf6e 174 PIRSF PIRSF025550 1 172 1.1E-78 T 28-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 6.7E-52 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 SUPERFAMILY SSF56327 168 440 3.84E-95 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 5.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 SUPERFAMILY SSF51735 3 164 2.96E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 2.0E-66 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 Gene3D G3DSA:3.90.1820.10 1 276 2.4E-65 T 28-03-2018 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 Gene3D G3DSA:3.90.1820.10 277 440 2.2E-43 T 28-03-2018 CO704_RS24795 90baddaae042991cbdaf6113510e85e3 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 SUPERFAMILY SSF103263 4 351 4.06E-149 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.949 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.0E-141 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 Pfam PF01264 Chorismate synthase 10 345 8.7E-144 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 PIRSF PIRSF001456 3 358 2.2E-143 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 Gene3D G3DSA:3.60.150.10 3 357 1.4E-162 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS06290 e8f444e6575ed4f8eb7842e7afe0eb63 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 3.7E-37 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 SUPERFAMILY SSF46767 86 169 1.57E-32 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 Gene3D G3DSA:3.30.160.70 4 84 6.4E-5 T 28-03-2018 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 Gene3D G3DSA:1.10.10.10 85 170 2.0E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 8.5E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 38.337 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 SUPERFAMILY SSF53155 8 92 2.2E-7 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 83 5.2E-15 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS13175 a389b12f290f345e50d8c0e4db08e0e5 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 Gene3D G3DSA:3.40.190.10 92 175 5.3E-9 T 28-03-2018 CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 SUPERFAMILY SSF53850 90 296 8.14E-48 T 28-03-2018 CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 Pfam PF03466 LysR substrate binding domain 89 293 2.2E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 Gene3D G3DSA:1.10.10.10 3 81 6.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 SUPERFAMILY SSF46785 4 83 1.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 Gene3D G3DSA:3.40.190.10 176 265 9.5E-24 T 28-03-2018 CO704_RS24640 589143d326ebece0b588b02cb1cccab7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17850 e5802574125443532cc1397d860d95b8 109 SUPERFAMILY SSF82771 17 86 5.62E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS17850 e5802574125443532cc1397d860d95b8 109 Gene3D G3DSA:3.40.1440.10 15 108 2.7E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.5E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1032 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82866 297 495 1.96E-49 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:3.30.2090.10 181 274 2.9E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82714 183 273 5.1E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:3.30.70.1430 565 666 1.5E-16 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:3.30.70.1430 39 141 5.4E-30 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 39 133 8.11E-28 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 136 183 2.25E-22 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 275 331 2.25E-22 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82866 837 1024 6.67E-38 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 563 669 2.56E-26 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82714 720 807 3.4E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:3.30.70.1440 670 766 4.0E-18 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 670 719 1.44E-22 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 SUPERFAMILY SSF82693 806 854 1.44E-22 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:1.20.1640.10 275 500 1.9E-46 T 28-03-2018 CO704_RS14895 420a8dec9d702c989414874059efea4b 1035 Gene3D G3DSA:1.20.1640.10 811 1027 3.5E-31 T 28-03-2018 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 SUPERFAMILY SSF69336 1213 1465 2.22E-87 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Gene3D G3DSA:3.20.20.70 781 1207 7.2E-146 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Gene3D G3DSA:3.20.20.70 438 780 9.2E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 SUPERFAMILY SSF56235 12 428 2.32E-148 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 5.0E-177 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Gene3D G3DSA:3.60.20.10 12 437 4.6E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Gene3D G3DSA:2.160.20.60 1211 1485 3.8E-95 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.2E-157 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 SUPERFAMILY SSF51395 434 1189 3.25E-251 T 28-03-2018 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Pfam PF01493 GXGXG motif 1236 1419 1.4E-75 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS01565 37cebe80ea85b6e916103aa7c092ba3d 1486 Pfam PF04898 Glutamate synthase central domain 457 737 3.9E-106 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.885 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 4.6E-51 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 SUPERFAMILY SSF109635 9 109 3.53E-36 T 28-03-2018 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 28-03-2018 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.4E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CO704_RS19420 8c3facf184929289be6b151b5e972c40 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 SUPERFAMILY SSF47413 5 59 4.22E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Gene3D G3DSA:1.10.260.40 20 85 1.0E-10 T 28-03-2018 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Gene3D G3DSA:1.10.10.60 2 19 7.9E-4 T 28-03-2018 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 SUPERFAMILY SSF53822 74 338 9.82E-40 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Gene3D G3DSA:3.40.50.2300 170 340 3.9E-29 T 28-03-2018 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 45 5.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Pfam PF13377 Periplasmic binding protein-like domain 173 336 1.5E-22 T 28-03-2018 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 Gene3D G3DSA:3.40.50.2300 86 169 4.4E-8 T 28-03-2018 CO704_RS07100 6dfb1291e710faef5529d9611818a11d 356 SMART SM00354 4 71 8.7E-4 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Pfam PF13533 Biotin-lipoyl like 47 95 1.4E-19 T 28-03-2018 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Pfam PF13437 HlyD family secretion protein 156 250 1.8E-10 T 28-03-2018 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Gene3D G3DSA:2.40.50.100 171 243 0.3 T 28-03-2018 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Gene3D G3DSA:2.40.50.100 46 143 8.2E-14 T 28-03-2018 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 243 1.0E-32 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Gene3D G3DSA:2.40.50.100 144 170 5.8E-8 T 28-03-2018 CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 59.004 T 28-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CO704_RS01480 5def0aa8eb7bdc864982b0ff8da7df4f 310 SUPERFAMILY SSF111369 46 207 1.83E-22 T 28-03-2018 CO704_RS19095 322851b08a66d446bc5ee18b041a22de 255 Pfam PF08241 Methyltransferase domain 49 145 9.5E-26 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CO704_RS19095 322851b08a66d446bc5ee18b041a22de 255 SUPERFAMILY SSF53335 12 244 1.1E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS19095 322851b08a66d446bc5ee18b041a22de 255 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 135 149 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CO704_RS19095 322851b08a66d446bc5ee18b041a22de 255 Gene3D G3DSA:3.40.50.150 30 245 1.7E-41 T 28-03-2018 CO704_RS03480 12307b15003ec242651572c688e9e996 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.8E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CO704_RS03480 12307b15003ec242651572c688e9e996 455 Gene3D G3DSA:1.10.4100.10 263 444 7.0E-33 T 28-03-2018 CO704_RS03480 12307b15003ec242651572c688e9e996 455 Gene3D G3DSA:3.30.1330.90 10 158 6.6E-51 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CO704_RS03480 12307b15003ec242651572c688e9e996 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.1E-220 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CO704_RS03480 12307b15003ec242651572c688e9e996 455 SUPERFAMILY SSF143548 16 158 1.1E-45 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CO704_RS03480 12307b15003ec242651572c688e9e996 455 Pfam PF03315 Serine dehydratase beta chain 3 155 1.9E-55 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 SUPERFAMILY SSF53850 93 290 8.69E-23 T 28-03-2018 CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 Pfam PF03466 LysR substrate binding domain 99 289 2.7E-18 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 Gene3D G3DSA:3.40.190.10 94 182 4.0E-7 T 28-03-2018 CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 Gene3D G3DSA:3.40.190.10 183 268 4.0E-10 T 28-03-2018 CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 Gene3D G3DSA:1.10.10.10 2 89 1.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS21040 de47a62266f3626216f8ec9ce59ec2ba 296 SUPERFAMILY SSF46785 8 91 1.21E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 SUPERFAMILY SSF53383 60 468 2.96E-94 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 Gene3D G3DSA:3.40.640.10 120 370 9.4E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 SMART SM00345 7 66 4.5E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 Gene3D G3DSA:1.10.10.10 1 68 7.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.4E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 Gene3D G3DSA:3.90.1150.10 371 468 7.7E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 SUPERFAMILY SSF46785 2 70 3.54E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11600 618e7e1327be32a9d9bc909a3f11b420 475 Pfam PF00155 Aminotransferase class I and II 146 445 2.9E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS02045 f217627d2026059caa172c0cb825fb89 152 Gene3D G3DSA:3.40.50.10110 1 147 1.4E-51 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CO704_RS02045 f217627d2026059caa172c0cb825fb89 152 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.5E-38 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CO704_RS02045 f217627d2026059caa172c0cb825fb89 152 SUPERFAMILY SSF102400 1 145 4.32E-45 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 SUPERFAMILY SSF48208 120 610 4.76E-60 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 Gene3D G3DSA:2.60.40.10 23 120 2.3E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 Pfam PF02927 Cellulase N-terminal ig-like domain 21 105 7.0E-16 T 28-03-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 Gene3D G3DSA:1.50.10.10 125 612 2.9E-59 T 28-03-2018 CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 Pfam PF00759 Glycosyl hydrolase family 9 128 566 8.1E-27 T 28-03-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS03665 99bcd218c80636f1ec1236082cfdf128 614 SUPERFAMILY SSF81296 20 119 2.1E-15 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 2.2E-8 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 SUPERFAMILY SSF55957 432 544 1.49E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 5.0E-35 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Gene3D G3DSA:3.40.120.10 214 331 2.1E-21 T 28-03-2018 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 SUPERFAMILY SSF53738 26 235 8.24E-50 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 SUPERFAMILY SSF53738 209 317 3.65E-9 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Gene3D G3DSA:3.30.310.50 443 546 2.7E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Gene3D G3DSA:3.40.120.10 332 442 9.4E-28 T 28-03-2018 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.3E-30 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.5E-21 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 SUPERFAMILY SSF53738 305 446 1.81E-32 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 28-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CO704_RS17045 d6557b70bcadb1fe837b62317ebaeb54 547 Gene3D G3DSA:3.40.120.10 12 213 2.0E-45 T 28-03-2018 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 Gene3D G3DSA:1.10.10.200 1 78 4.6E-29 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 SUPERFAMILY SSF75625 3 243 4.84E-96 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.024 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 Gene3D G3DSA:3.30.70.980 83 177 3.2E-32 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 Gene3D G3DSA:3.30.70.980 178 246 3.3E-12 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.2E-104 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS08850 cf0398022a675cf51c0bcbf4f91709a7 246 Pfam PF01709 Transcriptional regulator 5 235 2.7E-93 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS11200 0f8e0167093eeaeca4dbad6332904b87 404 Pfam PF07690 Major Facilitator Superfamily 29 337 4.2E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS11200 0f8e0167093eeaeca4dbad6332904b87 404 SUPERFAMILY SSF103473 15 401 4.45E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS11200 0f8e0167093eeaeca4dbad6332904b87 404 Gene3D G3DSA:1.20.1250.20 208 402 1.8E-17 T 28-03-2018 CO704_RS11200 0f8e0167093eeaeca4dbad6332904b87 404 Gene3D G3DSA:1.20.1250.20 14 207 1.1E-17 T 28-03-2018 CO704_RS19600 470566565026cbdb159d65dcb8f8c966 165 PIRSF PIRSF004572 1 165 2.1E-72 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CO704_RS19600 470566565026cbdb159d65dcb8f8c966 165 Pfam PF06558 Secretion monitor precursor protein (SecM) 21 162 5.7E-55 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CO704_RS19600 470566565026cbdb159d65dcb8f8c966 165 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 165 1.0E-47 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CO704_RS19600 470566565026cbdb159d65dcb8f8c966 165 Hamap MF_01332 Secretion monitor [secM]. 1 165 36.979 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CO704_RS25015 aab632f6db1eba9ce063e9bf18d9e504 102 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 83 1.5E-21 T 28-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CO704_RS25015 aab632f6db1eba9ce063e9bf18d9e504 102 Gene3D G3DSA:1.10.260.40 2 98 2.7E-11 T 28-03-2018 CO704_RS25015 aab632f6db1eba9ce063e9bf18d9e504 102 SUPERFAMILY SSF47413 13 88 2.82E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25015 aab632f6db1eba9ce063e9bf18d9e504 102 Pfam PF01381 Helix-turn-helix 18 69 1.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25015 aab632f6db1eba9ce063e9bf18d9e504 102 SMART SM00530 14 70 4.7E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 SUPERFAMILY SSF55811 5 126 6.09E-35 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 Gene3D G3DSA:3.90.79.10 3 134 2.6E-30 T 28-03-2018 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.9E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.9E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS13995 2be479a5a87e87691531150592c19ff1 136 Pfam PF00293 NUDIX domain 6 125 1.5E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 Gene3D G3DSA:3.40.1080.10 232 526 2.0E-41 T 28-03-2018 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 551 7.0E-297 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 SUPERFAMILY SSF100950 40 280 2.44E-37 T 28-03-2018 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 Gene3D G3DSA:3.40.1080.10 2 218 2.6E-35 T 28-03-2018 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CO704_RS21275 73979ce4046d8aecc49efda962860f2b 551 SUPERFAMILY SSF100950 232 488 1.63E-21 T 28-03-2018 CO704_RS15070 875060a1c4296950cee599c2cc979ab8 316 Gene3D G3DSA:3.40.50.1980 155 316 9.9E-35 T 28-03-2018 CO704_RS15070 875060a1c4296950cee599c2cc979ab8 316 Gene3D G3DSA:3.40.50.1980 15 154 1.3E-24 T 28-03-2018 CO704_RS15070 875060a1c4296950cee599c2cc979ab8 316 Pfam PF01497 Periplasmic binding protein 51 286 4.7E-23 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS15070 875060a1c4296950cee599c2cc979ab8 316 SUPERFAMILY SSF53807 39 312 3.06E-46 T 28-03-2018 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.7E-171 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 SUPERFAMILY SSF52096 5 318 3.06E-104 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.815 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.3E-62 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CO704_RS19230 5f195e2f319eea9801d3a2c13de6b0a0 319 Gene3D G3DSA:3.90.226.10 9 316 1.7E-68 T 28-03-2018 CO704_RS08705 c4409bbd735701b51a2d35004d275953 309 Gene3D G3DSA:3.30.1330.60 108 296 6.4E-40 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS08705 c4409bbd735701b51a2d35004d275953 309 SUPERFAMILY SSF103088 157 265 3.14E-18 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS08705 c4409bbd735701b51a2d35004d275953 309 Pfam PF00691 OmpA family 161 257 2.2E-12 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS08705 c4409bbd735701b51a2d35004d275953 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 1.4E-20 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 Gene3D G3DSA:2.40.170.20 162 656 2.3E-84 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 1.4E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 Pfam PF00593 TonB dependent receptor 213 655 8.4E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 Gene3D G3DSA:2.170.130.10 25 158 1.4E-41 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 SUPERFAMILY SSF56935 30 656 1.92E-128 T 28-03-2018 CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS06985 b83c5136e4e8c0ebe92fde18d6e6524d 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Gene3D G3DSA:3.40.50.2000 884 1070 1.5E-12 T 28-03-2018 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Pfam PF10119 Predicted methyltransferase regulatory domain 190 268 7.8E-9 T 28-03-2018 IPR018773 Methyltransferase regulatory domain, predicted CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Pfam PF13844 Glycosyl transferase family 41 738 881 2.3E-22 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Pfam PF13844 Glycosyl transferase family 41 902 1060 1.5E-11 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 SUPERFAMILY SSF48452 514 685 5.06E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Gene3D G3DSA:3.40.50.150 3 170 3.4E-17 T 28-03-2018 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 SMART SM00028 581 614 320.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 SMART SM00028 615 648 6.2 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 SMART SM00028 649 682 2.7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Pfam PF13847 Methyltransferase domain 18 122 5.3E-8 T 28-03-2018 IPR025714 Methyltransferase domain CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 Gene3D G3DSA:1.25.40.10 509 694 3.4E-27 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS08500 68cddc4f690d605e07a3ef364cefa4d1 1104 SUPERFAMILY SSF53335 7 136 2.3E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS02335 0c344095a0ea3875c3a538b2812fc14c 282 Gene3D G3DSA:3.60.130.10 1 282 1.3E-85 T 28-03-2018 CO704_RS02335 0c344095a0ea3875c3a538b2812fc14c 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 6 272 3.2E-67 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CO704_RS02335 0c344095a0ea3875c3a538b2812fc14c 282 SUPERFAMILY SSF51197 6 280 1.56E-97 T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 Gene3D G3DSA:1.10.260.40 13 64 9.5E-20 T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 SMART SM00354 12 82 7.1E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.1E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 Gene3D G3DSA:3.40.50.2300 185 323 1.4E-30 T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 SUPERFAMILY SSF47413 12 70 2.06E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 Pfam PF13377 Periplasmic binding protein-like domain 180 339 5.6E-30 T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 Gene3D G3DSA:3.40.50.2300 65 184 6.3E-27 T 28-03-2018 CO704_RS06460 292a9c21192e8d9f271ed15d204482c7 339 SUPERFAMILY SSF53822 72 339 1.65E-53 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS06045 60d3b354b6aceff68711256de0accd70 493 PIRSF PIRSF006060 2 487 8.7E-65 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS06045 60d3b354b6aceff68711256de0accd70 493 Pfam PF13520 Amino acid permease 24 428 5.4E-48 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS04200 03297fa7bcc8f5d53f98388ab885d305 155 SUPERFAMILY SSF102712 84 125 3.66E-5 T 28-03-2018 CO704_RS04200 03297fa7bcc8f5d53f98388ab885d305 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 104 109 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CO704_RS04200 03297fa7bcc8f5d53f98388ab885d305 155 TIGRFAM TIGR00608 radc: DNA repair protein RadC 35 154 9.8E-44 T 28-03-2018 IPR001405 RadC protein CO704_RS04200 03297fa7bcc8f5d53f98388ab885d305 155 Gene3D G3DSA:3.40.140.10 32 154 3.4E-45 T 28-03-2018 CO704_RS04200 03297fa7bcc8f5d53f98388ab885d305 155 Pfam PF04002 RadC-like JAB domain 36 153 5.0E-43 T 28-03-2018 IPR025657 RadC-like JAB domain CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 Gene3D G3DSA:3.30.420.40 222 374 5.8E-33 T 28-03-2018 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 Gene3D G3DSA:3.30.420.40 3 179 3.2E-56 T 28-03-2018 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 SUPERFAMILY SSF53067 143 340 2.81E-26 T 28-03-2018 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 SUPERFAMILY SSF53067 66 111 2.81E-26 T 28-03-2018 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 SUPERFAMILY SSF53067 5 37 2.81E-26 T 28-03-2018 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.611 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CO704_RS13420 b4b5b8e49124fad024fd1a83f1666751 374 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 2.3E-172 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 SMART SM00387 562 675 6.8E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 886 24.627 T 28-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Gene3D G3DSA:1.20.120.160 771 886 4.8E-16 T 28-03-2018 CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Pfam PF01627 Hpt domain 807 867 6.8E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 SUPERFAMILY SSF55874 505 673 3.42E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 672 4.2E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Pfam PF16359 RcsD-ABL domain 684 785 2.2E-41 T 28-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 SUPERFAMILY SSF47226 799 885 4.58E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS06735 a6a67edfd4c034c6c6309742871a3aa6 886 Gene3D G3DSA:3.30.565.10 520 684 6.1E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Pfam PF03123 CAT RNA binding domain 1 54 5.9E-23 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 SUPERFAMILY SSF63520 170 273 1.44E-27 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Gene3D G3DSA:2.30.24.10 1 57 2.8E-24 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Pfam PF00874 PRD domain 77 161 5.7E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Pfam PF00874 PRD domain 179 271 8.4E-20 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 SUPERFAMILY SSF50151 1 54 2.22E-17 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 SUPERFAMILY SSF63520 58 163 1.28E-27 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 SMART SM01061 1 59 2.1E-27 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Gene3D G3DSA:1.10.1790.10 164 276 1.5E-24 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 Gene3D G3DSA:1.10.1790.10 58 163 2.2E-24 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS16355 df065c4ce0bbd7acd94919285cea6777 279 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 28-03-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 Pfam PF03466 LysR substrate binding domain 88 293 7.7E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 Gene3D G3DSA:1.10.10.10 1 84 1.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 SUPERFAMILY SSF46785 3 88 4.08E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.3E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 Gene3D G3DSA:3.40.190.10 177 265 6.9E-19 T 28-03-2018 CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 SUPERFAMILY SSF53850 89 296 1.63E-39 T 28-03-2018 CO704_RS07785 468a0b0a1d28a760bdf8a5f5ab23db67 299 Gene3D G3DSA:3.40.190.10 89 176 1.2E-11 T 28-03-2018 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 Pfam PF09278 MerR, DNA binding 54 119 2.8E-13 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 151 8.1E-70 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 4.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 4.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 4.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 SMART SM00422 12 80 4.1E-22 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 Pfam PF00376 MerR family regulatory protein 13 49 1.0E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 Gene3D G3DSA:1.10.1660.10 67 140 1.1E-6 T 28-03-2018 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 SUPERFAMILY SSF46955 12 134 1.06E-26 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS22510 2dbba4ed4df6ffa4ef82adac4dd49f42 151 Gene3D G3DSA:1.10.1660.10 8 66 1.4E-17 T 28-03-2018 CO704_RS02750 e08d1298f987dbf413eaadc1c40e780b 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 5.4E-74 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CO704_RS02750 e08d1298f987dbf413eaadc1c40e780b 239 Pfam PF02390 Putative methyltransferase 64 233 1.6E-61 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CO704_RS02750 e08d1298f987dbf413eaadc1c40e780b 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.153 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CO704_RS02750 e08d1298f987dbf413eaadc1c40e780b 239 SUPERFAMILY SSF53335 16 237 3.86E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS02750 e08d1298f987dbf413eaadc1c40e780b 239 Gene3D G3DSA:3.40.50.150 30 239 1.6E-30 T 28-03-2018 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 PIRSF PIRSF005751 4 347 7.5E-124 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 Gene3D G3DSA:3.40.630.30 5 116 1.3E-8 T 28-03-2018 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 19 341 1.7E-122 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 Pfam PF08218 Citrate lyase ligase C-terminal domain 150 338 1.2E-75 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 Gene3D G3DSA:3.40.50.620 133 343 2.2E-30 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS20520 81dfa69b904411caed998a83544b9165 347 SUPERFAMILY SSF52374 149 269 6.29E-25 T 28-03-2018 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 SUPERFAMILY SSF52374 308 342 6.29E-25 T 28-03-2018 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 SUPERFAMILY SSF55729 35 116 7.15E-11 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS20520 81dfa69b904411caed998a83544b9165 347 SMART SM00764 150 338 2.8E-117 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 150 208 2.5E-11 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS20520 81dfa69b904411caed998a83544b9165 347 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 114 342 3.0E-81 T 28-03-2018 CO704_RS20880 44d48c28fdf40db95d705bee4a7bd6eb 218 Gene3D G3DSA:3.20.20.70 4 218 8.8E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20880 44d48c28fdf40db95d705bee4a7bd6eb 218 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 208 6.3E-26 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS20880 44d48c28fdf40db95d705bee4a7bd6eb 218 SMART SM00934 7 209 1.0E-33 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS20880 44d48c28fdf40db95d705bee4a7bd6eb 218 SUPERFAMILY SSF51366 4 217 6.81E-39 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS01475 5450146659f02bc434ebc93b1e989cd8 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.037 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CO704_RS01475 5450146659f02bc434ebc93b1e989cd8 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.2E-20 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Gene3D G3DSA:3.30.70.1450 367 458 5.4E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Gene3D G3DSA:3.40.50.720 233 366 1.1E-23 T 28-03-2018 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 SUPERFAMILY SSF116726 390 444 1.96E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 SUPERFAMILY SSF51735 1 152 7.09E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Gene3D G3DSA:3.40.50.720 2 139 2.0E-26 T 28-03-2018 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.2E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.2E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.2E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.2E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.2E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Gene3D G3DSA:3.30.70.1450 140 232 7.7E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 SUPERFAMILY SSF51735 232 376 4.9E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Pfam PF02080 TrkA-C domain 157 225 7.1E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Pfam PF02080 TrkA-C domain 390 451 6.4E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Pfam PF02254 TrkA-N domain 235 350 2.0E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 Pfam PF02254 TrkA-N domain 3 111 2.4E-29 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CO704_RS01250 9b72f1bcd6b4c8194159158954ab01a8 458 SUPERFAMILY SSF116726 148 226 9.94E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 Gene3D G3DSA:1.20.5.40 107 134 6.4E-21 T 28-03-2018 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 Gene3D G3DSA:1.10.10.60 138 184 2.5E-7 T 28-03-2018 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 SMART SM00857 2 136 3.4E-64 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 Gene3D G3DSA:3.40.50.1390 1 106 2.5E-35 T 28-03-2018 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 Pfam PF00239 Resolvase, N terminal domain 3 135 5.6E-50 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 SUPERFAMILY SSF46689 138 182 9.86E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 182 4.8E-13 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CO704_RS04760 c5c4334dec07e0977f6beb30db45372f 185 SUPERFAMILY SSF53041 1 136 5.89E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 SUPERFAMILY SSF52425 3 178 5.76E-53 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 341 360 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 Gene3D G3DSA:1.25.40.80 133 288 2.4E-40 T 28-03-2018 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 Pfam PF00875 DNA photolyase 5 173 3.6E-45 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 SUPERFAMILY SSF48173 191 468 5.36E-111 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 Gene3D G3DSA:3.40.50.620 1 131 3.2E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 PRINTS PR00147 DNA photolyase signature 341 359 1.1E-30 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 PRINTS PR00147 DNA photolyase signature 380 394 1.1E-30 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 PRINTS PR00147 DNA photolyase signature 321 337 1.1E-30 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 PRINTS PR00147 DNA photolyase signature 144 160 1.1E-30 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 321 333 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 Gene3D G3DSA:1.10.579.10 289 469 5.3E-76 T 28-03-2018 CO704_RS16730 4ee8badab270e565718b3519fdd3f85e 469 Pfam PF03441 FAD binding domain of DNA photolyase 271 465 2.1E-85 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CO704_RS02030 cb0dc32e75d8afc69ccb28523300d3a9 150 SUPERFAMILY SSF48029 41 143 7.85E-5 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS02030 cb0dc32e75d8afc69ccb28523300d3a9 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 6.2E-65 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 CO704_RS02030 cb0dc32e75d8afc69ccb28523300d3a9 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 2.0E-65 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 CO704_RS02030 cb0dc32e75d8afc69ccb28523300d3a9 150 Gene3D G3DSA:3.40.50.1220 7 79 0.016 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS22540 4c4329471c58301d0e5e588059db4e8b 350 Gene3D G3DSA:3.40.50.1980 23 181 5.8E-25 T 28-03-2018 CO704_RS22540 4c4329471c58301d0e5e588059db4e8b 350 SUPERFAMILY SSF53807 28 346 1.1E-56 T 28-03-2018 CO704_RS22540 4c4329471c58301d0e5e588059db4e8b 350 Gene3D G3DSA:3.40.50.1980 189 349 2.2E-42 T 28-03-2018 CO704_RS22540 4c4329471c58301d0e5e588059db4e8b 350 Pfam PF01497 Periplasmic binding protein 44 297 1.8E-28 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Gene3D G3DSA:3.30.70.20 153 253 1.7E-23 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Gene3D G3DSA:3.30.70.20 43 113 7.0E-21 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Gene3D G3DSA:1.20.5.480 254 291 9.8E-22 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Pfam PF13247 4Fe-4S dicluster domain 92 189 2.1E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 1.6E-18 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 8.5E-139 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Gene3D G3DSA:3.30.70.20 12 42 0.0071 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 Gene3D G3DSA:3.30.70.20 114 152 1.4E-16 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 SUPERFAMILY SSF54862 27 277 8.69E-71 T 28-03-2018 CO704_RS17880 e3406af3997e7d31773e579e50eb78a4 294 PIRSF PIRSF036298 1 294 5.2E-157 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CO704_RS00570 00c650f95c4809a5d58701d8df7f54e4 438 SUPERFAMILY SSF53850 25 424 7.06E-76 T 28-03-2018 CO704_RS00570 00c650f95c4809a5d58701d8df7f54e4 438 Gene3D G3DSA:3.40.190.10 236 383 1.1E-11 T 28-03-2018 CO704_RS00570 00c650f95c4809a5d58701d8df7f54e4 438 Gene3D G3DSA:3.40.190.10 24 214 7.0E-30 T 28-03-2018 CO704_RS00570 00c650f95c4809a5d58701d8df7f54e4 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CO704_RS00570 00c650f95c4809a5d58701d8df7f54e4 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 368 8.2E-45 T 28-03-2018 CO704_RS14665 131aad241ba74638f7117245ccdc0562 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS14665 131aad241ba74638f7117245ccdc0562 136 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.9E-43 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CO704_RS14665 131aad241ba74638f7117245ccdc0562 136 PIRSF PIRSF002889 1 136 1.8E-41 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CO704_RS14665 131aad241ba74638f7117245ccdc0562 136 Pfam PF00460 Flagella basal body rod protein 9 39 4.9E-12 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 Gene3D G3DSA:1.10.3210.10 92 253 0.0012 T 28-03-2018 CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 Gene3D G3DSA:3.40.50.300 316 635 4.8E-9 T 28-03-2018 CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1080 0.0 T 28-03-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 SUPERFAMILY SSF52540 509 618 1.48E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 SUPERFAMILY SSF52540 726 858 1.48E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17950 04c60a12a0eec222f34322ec5e20d40a 1084 SUPERFAMILY SSF52540 419 467 1.48E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 Gene3D G3DSA:3.40.50.300 11 239 8.0E-53 T 28-03-2018 CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 Gene3D G3DSA:3.30.1220.10 250 380 3.4E-29 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 SUPERFAMILY SSF52540 8 333 7.52E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 220 1.2E-58 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 SMART SM00833 266 381 1.4E-43 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS07980 af467dd0171bb23bbffbe2c0fe36a0e5 406 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 380 2.8E-25 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS02975 7ac4553a2e0691fbc8a8b599a41ae8b5 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 8.5E-46 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CO704_RS02975 7ac4553a2e0691fbc8a8b599a41ae8b5 198 SUPERFAMILY SSF100950 11 198 4.88E-58 T 28-03-2018 CO704_RS02975 7ac4553a2e0691fbc8a8b599a41ae8b5 198 Gene3D G3DSA:3.40.50.10420 6 198 2.5E-62 T 28-03-2018 CO704_RS02975 7ac4553a2e0691fbc8a8b599a41ae8b5 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 1.0E-54 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CO704_RS02975 7ac4553a2e0691fbc8a8b599a41ae8b5 198 PIRSF PIRSF006806 7 195 6.6E-37 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CO704_RS10590 777ec79b4a013a91ec1046ff53007fa4 139 SUPERFAMILY SSF102462 5 137 8.89E-26 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CO704_RS10590 777ec79b4a013a91ec1046ff53007fa4 139 Pfam PF09391 Protein of unknown function (DUF2000) 8 137 1.0E-24 T 28-03-2018 IPR018988 Protein of unknown function DUF2000 CO704_RS10590 777ec79b4a013a91ec1046ff53007fa4 139 Gene3D G3DSA:3.40.1490.10 7 136 1.2E-29 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CO704_RS11380 f4c3c66512b8fd26c9da5b9552d6d8d3 456 SUPERFAMILY SSF56954 2 451 3.92E-82 T 28-03-2018 CO704_RS11380 f4c3c66512b8fd26c9da5b9552d6d8d3 456 Pfam PF02321 Outer membrane efflux protein 60 244 8.6E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS11380 f4c3c66512b8fd26c9da5b9552d6d8d3 456 Pfam PF02321 Outer membrane efflux protein 270 446 3.8E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS11380 f4c3c66512b8fd26c9da5b9552d6d8d3 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 451 7.6E-69 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CO704_RS11380 f4c3c66512b8fd26c9da5b9552d6d8d3 456 Gene3D G3DSA:1.20.1600.10 22 454 4.5E-74 T 28-03-2018 CO704_RS18380 0e886dd6cd5ba7b7f90e3a80b1cdf692 181 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 80 3.7E-11 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CO704_RS18380 0e886dd6cd5ba7b7f90e3a80b1cdf692 181 Gene3D G3DSA:3.30.70.100 5 97 2.5E-19 T 28-03-2018 CO704_RS18380 0e886dd6cd5ba7b7f90e3a80b1cdf692 181 SUPERFAMILY SSF54909 4 97 2.03E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 SUPERFAMILY SSF56322 9 515 6.41E-164 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 PIRSF PIRSF001373 1 520 3.4E-249 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 Gene3D G3DSA:3.60.120.10 1 520 1.5E-158 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 Pfam PF00425 chorismate binding enzyme 242 502 5.8E-83 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.7E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.7E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.7E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.7E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 192 1.8E-13 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS10265 109ce34f6c2a5c747d70d76050d12be9 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 1.0E-260 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CO704_RS09570 97e36458a26e273f153c18bd2d399118 158 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 17 156 9.1E-29 T 28-03-2018 IPR011747 Conserved hypothetical protein CHP02241 CO704_RS09570 97e36458a26e273f153c18bd2d399118 158 Pfam PF06841 T4-like virus tail tube protein gp19 20 154 2.6E-33 T 28-03-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 Pfam PF07650 KH domain 38 111 1.1E-18 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 SMART SM00322 60 125 1.6E-6 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 SUPERFAMILY SSF54814 2 106 1.6E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 28-03-2018 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 Gene3D G3DSA:3.30.300.20 17 107 9.0E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.5E-100 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CO704_RS01125 a26f2e44ad2339b301225a9cb2a0c9a9 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS00590 882ecb01a4f12f68ace86ba5f16b7d35 246 Gene3D G3DSA:3.20.20.190 2 242 1.0E-60 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CO704_RS00590 882ecb01a4f12f68ace86ba5f16b7d35 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 239 1.8E-40 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CO704_RS00590 882ecb01a4f12f68ace86ba5f16b7d35 246 SUPERFAMILY SSF51695 5 239 8.11E-64 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CO704_RS11485 58e9f4e60ffcea13beb86a42fd8476bb 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 300 1.8E-61 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11485 58e9f4e60ffcea13beb86a42fd8476bb 321 Gene3D G3DSA:3.40.50.1100 20 136 2.6E-34 T 28-03-2018 CO704_RS11485 58e9f4e60ffcea13beb86a42fd8476bb 321 SUPERFAMILY SSF53686 3 317 7.07E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11485 58e9f4e60ffcea13beb86a42fd8476bb 321 Gene3D G3DSA:3.40.50.1100 137 321 5.9E-50 T 28-03-2018 CO704_RS11485 58e9f4e60ffcea13beb86a42fd8476bb 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CO704_RS23755 7a333de8962835be5608008297ffc52b 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 315 1.3E-75 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CO704_RS23755 7a333de8962835be5608008297ffc52b 321 Gene3D G3DSA:3.40.50.2000 1 163 2.3E-39 T 28-03-2018 CO704_RS23755 7a333de8962835be5608008297ffc52b 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 318 6.6E-128 T 28-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CO704_RS23755 7a333de8962835be5608008297ffc52b 321 SUPERFAMILY SSF53756 1 318 1.88E-72 T 28-03-2018 CO704_RS23755 7a333de8962835be5608008297ffc52b 321 Gene3D G3DSA:3.40.50.2000 164 321 5.7E-35 T 28-03-2018 CO704_RS05800 6affce3083b277d6e82e7598a6c6515e 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 1.1E-109 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CO704_RS05800 6affce3083b277d6e82e7598a6c6515e 291 SUPERFAMILY SSF161098 16 268 8.5E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05800 6affce3083b277d6e82e7598a6c6515e 291 Gene3D G3DSA:1.10.3720.10 18 282 3.7E-37 T 28-03-2018 CO704_RS05800 6affce3083b277d6e82e7598a6c6515e 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 269 1.8E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05800 6affce3083b277d6e82e7598a6c6515e 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 275 1.4E-108 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CO704_RS06295 9129c34572f26e2b4db0b1c4a3435e6b 274 Gene3D G3DSA:3.30.1380.10 20 274 2.0E-94 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS06295 9129c34572f26e2b4db0b1c4a3435e6b 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 65.112 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CO704_RS06295 9129c34572f26e2b4db0b1c4a3435e6b 274 SUPERFAMILY SSF55166 21 272 5.1E-99 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS06295 9129c34572f26e2b4db0b1c4a3435e6b 274 PIRSF PIRSF018455 2 274 2.3E-116 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CO704_RS06295 9129c34572f26e2b4db0b1c4a3435e6b 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 5.0E-93 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CO704_RS24950 c92eef8e682e9b6a9b3734b4e58f502b 150 SUPERFAMILY SSF46894 26 104 1.64E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS24950 c92eef8e682e9b6a9b3734b4e58f502b 150 Gene3D G3DSA:1.10.10.10 6 109 1.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24950 c92eef8e682e9b6a9b3734b4e58f502b 150 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 102 2.5E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS24950 c92eef8e682e9b6a9b3734b4e58f502b 150 SMART SM00862 26 102 1.2E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 5.8E-34 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 5.8E-34 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 5.8E-34 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 5.8E-34 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 5.8E-34 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 SUPERFAMILY SSF160544 254 351 8.76E-27 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 342 8.7E-93 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 346 9.2E-112 T 28-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 CO704_RS16130 c2ae94272e68a370c034f2599f3424fe 360 Gene3D G3DSA:3.40.1690.10 211 350 4.3E-44 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS14610 2af2e98c7c8f4e901bc9d3544dff6e11 60 Gene3D G3DSA:3.30.160.220 3 55 7.8E-28 T 28-03-2018 IPR015051 Protein YoaG CO704_RS14610 2af2e98c7c8f4e901bc9d3544dff6e11 60 SUPERFAMILY SSF103063 1 60 4.58E-30 T 28-03-2018 IPR015051 Protein YoaG CO704_RS14610 2af2e98c7c8f4e901bc9d3544dff6e11 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 5.7E-30 T 28-03-2018 IPR015051 Protein YoaG CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 SMART SM00382 33 232 1.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 SMART SM00382 311 503 8.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Pfam PF00005 ABC transporter 302 453 3.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Pfam PF00005 ABC transporter 25 182 4.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 SUPERFAMILY SSF52540 5 256 2.84E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Gene3D G3DSA:3.40.50.300 273 541 1.3E-72 T 28-03-2018 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Gene3D G3DSA:3.40.50.300 4 272 7.8E-61 T 28-03-2018 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 272 0.077 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 537 4.6E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11545 981eb3d9cbd3f898dd7b6da247f23e80 542 SUPERFAMILY SSF52540 276 525 2.07E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 3.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 3.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 3.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 9.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 Gene3D G3DSA:3.40.190.10 186 271 8.0E-15 T 28-03-2018 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 Pfam PF03466 LysR substrate binding domain 96 300 2.4E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 Gene3D G3DSA:3.40.190.10 100 185 1.3E-10 T 28-03-2018 CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 Gene3D G3DSA:1.10.10.10 10 92 2.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 SUPERFAMILY SSF46785 12 120 7.06E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10825 aaf6f07ed96fc7cc3c64f6825f5baea2 312 SUPERFAMILY SSF53850 97 302 2.35E-35 T 28-03-2018 CO704_RS14970 72c1cb7accf0c4101a196de01572d6b5 374 Pfam PF09375 Imelysin 135 367 4.3E-45 T 28-03-2018 IPR018976 Peptidase M75, Imelysin CO704_RS14970 72c1cb7accf0c4101a196de01572d6b5 374 SUPERFAMILY SSF49503 14 116 2.74E-6 T 28-03-2018 IPR008972 Cupredoxin CO704_RS14970 72c1cb7accf0c4101a196de01572d6b5 374 Gene3D G3DSA:3.90.20.10 153 369 4.2E-4 T 28-03-2018 CO704_RS14970 72c1cb7accf0c4101a196de01572d6b5 374 Pfam PF13473 Cupredoxin-like domain 12 115 2.6E-24 T 28-03-2018 IPR028096 EfeO-type cupredoxin-like domain CO704_RS24205 7de45e8877ec17467f41fab7f54a59f9 115 Pfam PF01844 HNH endonuclease 27 75 3.1E-11 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CO704_RS24205 7de45e8877ec17467f41fab7f54a59f9 115 SMART SM00507 15 70 1.4E-4 T 28-03-2018 IPR003615 HNH nuclease CO704_RS24205 7de45e8877ec17467f41fab7f54a59f9 115 Gene3D G3DSA:3.40.1800.10 6 87 3.2E-7 T 28-03-2018 CO704_RS16310 064f8ff1724ce846df218259f1ac0cde 187 Pfam PF09335 SNARE associated Golgi protein 23 144 4.3E-16 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS01020 40b6befa2f644b1efdfeb9a3eedaa2c1 190 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.6E-9 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CO704_RS01020 40b6befa2f644b1efdfeb9a3eedaa2c1 190 Gene3D G3DSA:3.10.50.40 1 164 7.6E-30 T 28-03-2018 CO704_RS01020 40b6befa2f644b1efdfeb9a3eedaa2c1 190 SUPERFAMILY SSF54534 2 140 4.32E-33 T 28-03-2018 CO704_RS01060 003a434175f571276c06ad3a583578ab 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.6E-65 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CO704_RS01060 003a434175f571276c06ad3a583578ab 156 SUPERFAMILY SSF47973 6 149 1.1E-60 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CO704_RS01060 003a434175f571276c06ad3a583578ab 156 PIRSF PIRSF002122 3 156 3.8E-64 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CO704_RS01060 003a434175f571276c06ad3a583578ab 156 Gene3D G3DSA:1.10.455.10 6 156 9.0E-62 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CO704_RS01060 003a434175f571276c06ad3a583578ab 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01060 003a434175f571276c06ad3a583578ab 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.9E-71 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01060 003a434175f571276c06ad3a583578ab 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.268 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01585 765aadf8e933931927bbf9e58820fc18 217 SUPERFAMILY SSF52317 1 215 3.57E-62 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS01585 765aadf8e933931927bbf9e58820fc18 217 PIRSF PIRSF006320 1 216 1.6E-102 T 28-03-2018 IPR026041 Glyoxalase ElbB CO704_RS01585 765aadf8e933931927bbf9e58820fc18 217 Gene3D G3DSA:3.40.50.880 1 217 1.2E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.4E-112 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 SUPERFAMILY SSF51161 2 262 4.26E-83 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Gene3D G3DSA:1.20.1180.10 197 262 6.9E-25 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 7.8E-31 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 9.0E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 178 0.0019 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 6.3E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 PIRSF PIRSF000456 5 262 2.6E-108 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Gene3D G3DSA:2.160.10.10 1 196 2.0E-47 T 28-03-2018 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS19250 d7b46aa3e7bc0f8368f1263170825aab 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.13 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CO704_RS04175 ddcac16b10d98738210b0a362dc07c30 413 Gene3D G3DSA:1.10.443.10 211 393 1.9E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS04175 ddcac16b10d98738210b0a362dc07c30 413 SUPERFAMILY SSF56349 106 387 1.5E-56 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS04175 ddcac16b10d98738210b0a362dc07c30 413 Pfam PF00589 Phage integrase family 214 377 9.1E-35 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS04175 ddcac16b10d98738210b0a362dc07c30 413 Gene3D G3DSA:1.10.150.130 95 210 8.5E-17 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS04175 ddcac16b10d98738210b0a362dc07c30 413 Pfam PF13356 Arm DNA-binding domain 8 95 9.5E-19 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS02190 01986b5e7564205e76040db88203bb5c 160 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 109 114 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CO704_RS02190 01986b5e7564205e76040db88203bb5c 160 Gene3D G3DSA:3.40.140.10 36 160 5.4E-45 T 28-03-2018 CO704_RS02190 01986b5e7564205e76040db88203bb5c 160 Pfam PF04002 RadC-like JAB domain 39 158 9.8E-43 T 28-03-2018 IPR025657 RadC-like JAB domain CO704_RS02190 01986b5e7564205e76040db88203bb5c 160 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 160 4.5E-46 T 28-03-2018 IPR001405 RadC protein CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 8.8E-63 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 SUPERFAMILY SSF46955 1 126 2.31E-34 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.8E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.8E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.8E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.8E-7 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 Gene3D G3DSA:1.10.1660.10 1 55 2.1E-20 T 28-03-2018 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 SMART SM00422 1 70 7.1E-28 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS05475 6e13e29fd07be24c24ef6673733e8ab9 136 Gene3D G3DSA:1.10.1660.10 56 136 4.5E-16 T 28-03-2018 CO704_RS08160 a367f338628cb4e4c69ab7b11c051fae 624 Pfam PF07693 KAP family P-loop domain 5 263 8.5E-34 T 28-03-2018 IPR011646 KAP family P-loop domain CO704_RS08160 a367f338628cb4e4c69ab7b11c051fae 624 Gene3D G3DSA:3.40.50.300 3 320 2.4E-4 T 28-03-2018 CO704_RS08160 a367f338628cb4e4c69ab7b11c051fae 624 SUPERFAMILY SSF52540 6 191 5.2E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 SUPERFAMILY SSF46785 6 91 7.62E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 Pfam PF03466 LysR substrate binding domain 91 296 1.4E-20 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 SUPERFAMILY SSF53850 92 299 1.33E-26 T 28-03-2018 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 Gene3D G3DSA:1.10.10.10 2 90 1.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 Gene3D G3DSA:3.40.190.10 92 181 4.1E-9 T 28-03-2018 CO704_RS07280 e1a4ad3f0bd7011ba50daa8ffec7ec49 308 Gene3D G3DSA:3.40.190.10 182 263 6.6E-11 T 28-03-2018 CO704_RS02285 9d02cecd73c753fa3be20d85a189022d 420 Pfam PF03497 Anthrax toxin LF subunit 61 229 1.9E-53 T 28-03-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 CO704_RS02285 9d02cecd73c753fa3be20d85a189022d 420 Gene3D G3DSA:3.90.1760.10 91 239 5.4E-45 T 28-03-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 CO704_RS02285 9d02cecd73c753fa3be20d85a189022d 420 SUPERFAMILY SSF81298 61 370 2.75E-57 T 28-03-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 Gene3D G3DSA:3.40.50.10490 66 241 1.0E-25 T 28-03-2018 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 Pfam PF01380 SIS domain 109 226 1.2E-14 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 71 2.6E-14 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 SUPERFAMILY SSF46689 6 72 1.08E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 ProSitePatterns PS00356 LacI-type HTH domain signature. 33 51 - T 28-03-2018 CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 Gene3D G3DSA:1.10.10.10 4 65 3.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03060 887031196ba5ae2729cbcdcbbd58a053 242 SUPERFAMILY SSF53697 85 230 6.81E-30 T 28-03-2018 CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 Gene3D G3DSA:2.20.25.10 1 39 5.2E-17 T 28-03-2018 CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 4.3E-58 T 28-03-2018 IPR004624 PhnA protein CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 Pfam PF03831 PhnA domain 44 111 3.6E-34 T 28-03-2018 IPR013988 PhnA protein, C-terminal CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 Gene3D G3DSA:2.30.30.40 43 110 7.0E-37 T 28-03-2018 CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.6E-16 T 28-03-2018 IPR013987 PhnA protein, N-terminal CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 SUPERFAMILY SSF82057 39 110 4.21E-29 T 28-03-2018 CO704_RS22320 4430c139ee76667d05486cba772b7bb4 111 SUPERFAMILY SSF57783 1 37 9.69E-15 T 28-03-2018 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 Pfam PF00717 Peptidase S24-like 114 179 1.5E-15 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 Pfam PF01726 LexA DNA binding domain 1 65 1.9E-31 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 SUPERFAMILY SSF51306 76 198 6.8E-39 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 Gene3D G3DSA:1.10.10.10 1 70 9.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 Gene3D G3DSA:2.10.109.10 80 198 3.7E-27 T 28-03-2018 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.633 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 SUPERFAMILY SSF46785 3 69 2.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22655 aa2f5513c94a6ebcd9f613836c138158 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 1.6E-85 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 SUPERFAMILY SSF53800 3 319 4.06E-101 T 28-03-2018 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 Pfam PF00762 Ferrochelatase 5 318 1.3E-108 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 319 2.3E-122 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.838 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 Gene3D G3DSA:3.40.50.1400 173 300 4.6E-41 T 28-03-2018 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CO704_RS05435 6a6a7d8ac62e852bbff56932b9c1346c 320 Gene3D G3DSA:3.40.50.1400 1 172 2.9E-47 T 28-03-2018 CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 SUPERFAMILY SSF53850 93 291 1.81E-18 T 28-03-2018 CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 Gene3D G3DSA:3.40.190.10 178 259 5.9E-5 T 28-03-2018 CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 Pfam PF03466 LysR substrate binding domain 94 288 2.5E-14 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 Gene3D G3DSA:3.40.190.10 94 177 1.9E-5 T 28-03-2018 CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 SUPERFAMILY SSF46785 5 82 6.53E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25560 989b06a553f28d956397c78c3577e14d 305 Gene3D G3DSA:1.10.10.10 1 86 3.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.8E-58 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 SUPERFAMILY SSF51735 30 209 1.81E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 SUPERFAMILY SSF48179 210 369 6.97E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Gene3D G3DSA:1.10.1040.10 210 487 6.0E-87 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Gene3D G3DSA:3.40.50.720 56 208 3.4E-50 T 28-03-2018 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Gene3D G3DSA:3.40.50.720 1 42 3.7E-4 T 28-03-2018 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.2E-133 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 5.3E-27 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 356 482 2.3E-23 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 SUPERFAMILY SSF48179 348 484 8.5E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS23395 45fbb0f21393c3df210726bed23e9c1d 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 39.001 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Gene3D G3DSA:1.10.8.50 121 263 1.9E-36 T 28-03-2018 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 1.4E-10 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 203 3.1E-12 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Gene3D G3DSA:3.20.190.10 2 120 2.2E-23 T 28-03-2018 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 SUPERFAMILY SSF57716 226 263 6.8E-12 T 28-03-2018 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 SUPERFAMILY SSF46946 126 214 4.58E-18 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 59.553 T 28-03-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 SMART SM01232 126 221 4.3E-15 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 SUPERFAMILY SSF81624 2 127 1.44E-22 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 SMART SM00898 2 110 1.7E-10 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CO704_RS16710 edf4caba30d4e57b89df69e612f59887 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 9.3E-8 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CO704_RS08685 4b025e94d38962e682b807c25b869f0c 139 SUPERFAMILY SSF52402 3 138 5.27E-24 T 28-03-2018 CO704_RS08685 4b025e94d38962e682b807c25b869f0c 139 Pfam PF00582 Universal stress protein family 3 138 1.3E-17 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS08685 4b025e94d38962e682b807c25b869f0c 139 Gene3D G3DSA:3.40.50.620 2 139 4.8E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS08685 4b025e94d38962e682b807c25b869f0c 139 PIRSF PIRSF006276 1 139 3.8E-42 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS07475 9db6a51ec814497181f05d96378e48ea 179 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 178 8.6E-114 T 28-03-2018 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF CO704_RS07475 9db6a51ec814497181f05d96378e48ea 179 SUPERFAMILY SSF51161 20 177 1.66E-37 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS07475 9db6a51ec814497181f05d96378e48ea 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 156 6.5E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS07475 9db6a51ec814497181f05d96378e48ea 179 Gene3D G3DSA:2.160.10.10 25 179 2.0E-30 T 28-03-2018 CO704_RS24775 48c86c59275624b534ae9f85cd734466 142 Gene3D G3DSA:2.60.40.790 5 135 7.1E-19 T 28-03-2018 IPR008978 HSP20-like chaperone CO704_RS24775 48c86c59275624b534ae9f85cd734466 142 SUPERFAMILY SSF49764 29 134 2.76E-18 T 28-03-2018 IPR008978 HSP20-like chaperone CO704_RS24775 48c86c59275624b534ae9f85cd734466 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 4.1E-18 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CO704_RS24775 48c86c59275624b534ae9f85cd734466 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 45.568 T 28-03-2018 IPR022848 Small heat shock protein IbpB CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 Gene3D G3DSA:3.90.226.10 7 224 5.3E-62 T 28-03-2018 CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 Gene3D G3DSA:1.10.12.10 225 273 3.4E-13 T 28-03-2018 IPR014748 Crontonase, C-terminal CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.299 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.1E-149 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 SUPERFAMILY SSF52096 16 280 1.99E-78 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS06645 49296a7618c7dfd5f98e007124c9fa20 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 9.9E-78 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 Pfam PF03466 LysR substrate binding domain 87 266 1.9E-13 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 Gene3D G3DSA:1.10.10.10 1 82 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 49.317 T 28-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 SUPERFAMILY SSF53850 89 266 6.36E-17 T 28-03-2018 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 Gene3D G3DSA:3.40.190.10 83 243 4.9E-12 T 28-03-2018 CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 SUPERFAMILY SSF46785 2 85 1.77E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23445 e5ea5529279e1402250c2c099f10bfda 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 SUPERFAMILY SSF46548 334 445 1.92E-20 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 SUPERFAMILY SSF142019 94 303 7.59E-60 T 28-03-2018 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Gene3D G3DSA:3.30.70.20 384 420 2.3E-10 T 28-03-2018 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 6.0E-33 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 651 249.426 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Pfam PF10531 SLBB domain 296 344 1.2E-10 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Gene3D G3DSA:3.30.70.20 421 535 2.3E-4 T 28-03-2018 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Pfam PF13237 4Fe-4S dicluster domain 373 427 3.2E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 446 9.1E-181 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Gene3D G3DSA:3.30.70.20 285 383 0.012 T 28-03-2018 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 8.0E-47 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS13365 5d386d6aac82c74a128c80e40ba98b10 651 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 Gene3D G3DSA:1.20.120.420 2 130 3.9E-31 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 Gene3D G3DSA:3.40.50.10470 131 336 6.7E-69 T 28-03-2018 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 329 2.5E-94 T 28-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 Pfam PF01008 Initiation factor 2 subunit family 48 329 2.9E-69 T 28-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 2.5E-123 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 339 36.419 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CO704_RS05200 604b408ae8608550dc5ec2e225e0c929 341 SUPERFAMILY SSF100950 9 334 1.47E-107 T 28-03-2018 CO704_RS23130 448965d4f16d058b6d5eb3c921cd529e 477 Gene3D G3DSA:1.20.5.340 147 298 1.9E-22 T 28-03-2018 CO704_RS23130 448965d4f16d058b6d5eb3c921cd529e 477 Pfam PF02646 RmuC family 137 433 9.0E-106 T 28-03-2018 IPR003798 DNA recombination RmuC CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 25 341 2.8E-123 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 Gene3D G3DSA:3.40.50.10800 25 110 1.1E-17 T 28-03-2018 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 Gene3D G3DSA:3.40.50.10800 115 208 4.1E-20 T 28-03-2018 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 SUPERFAMILY SSF142754 29 341 1.83E-107 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 6.3E-103 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.862 T 28-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CO704_RS16585 0cda7f8c1b402cf513c27c182594ecec 353 Gene3D G3DSA:3.40.50.10800 209 323 1.2E-31 T 28-03-2018 CO704_RS10790 631f37512862f0c5ab794df043a4f285 463 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 262 273 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS10790 631f37512862f0c5ab794df043a4f285 463 SUPERFAMILY SSF53720 8 461 1.83E-137 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS10790 631f37512862f0c5ab794df043a4f285 463 Gene3D G3DSA:3.40.309.10 253 444 3.8E-65 T 28-03-2018 CO704_RS10790 631f37512862f0c5ab794df043a4f285 463 Pfam PF00171 Aldehyde dehydrogenase family 10 458 3.7E-137 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS10790 631f37512862f0c5ab794df043a4f285 463 Gene3D G3DSA:3.40.605.10 1 252 2.6E-68 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS17165 ba2715e80d1a6159ad7d8b9b84bef10e 353 Pfam PF02562 PhoH-like protein 118 321 2.5E-95 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 CO704_RS17165 ba2715e80d1a6159ad7d8b9b84bef10e 353 Gene3D G3DSA:3.40.50.300 114 321 4.0E-29 T 28-03-2018 CO704_RS17165 ba2715e80d1a6159ad7d8b9b84bef10e 353 SUPERFAMILY SSF52540 117 318 5.88E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 10 320 49.724 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 127 2.0E-49 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 SUPERFAMILY SSF53271 75 312 3.81E-67 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 SMART SM01400 10 127 5.7E-76 T 28-03-2018 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 Gene3D G3DSA:3.40.50.2020 7 154 1.1E-65 T 28-03-2018 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 320 1.2E-126 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 210 319 5.2E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CO704_RS09645 01642a7860af15a1f407a1e52a18ef55 321 Gene3D G3DSA:3.40.50.2020 155 313 6.0E-43 T 28-03-2018 CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 3.2E-25 T 28-03-2018 CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 SUPERFAMILY SSF51735 4 253 1.74E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07580 0a719e21ede9311eb31cf258693548d1 253 Gene3D G3DSA:3.40.50.720 1 253 9.8E-36 T 28-03-2018 CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 Pfam PF00912 Transglycosylase 62 227 4.3E-50 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 SUPERFAMILY SSF56601 209 638 4.96E-93 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 SUPERFAMILY SSF53955 40 259 1.57E-65 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 773 4.7E-251 T 28-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 Gene3D G3DSA:3.40.710.10 241 609 2.4E-63 T 28-03-2018 CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 Gene3D G3DSA:1.10.3810.10 43 240 3.9E-59 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 692 772 1.7E-14 T 28-03-2018 IPR009647 Penicillin-binding, C-terminal CO704_RS04965 54ffd8277ed1a1e6500177dccf48bbb9 775 Pfam PF00905 Penicillin binding protein transpeptidase domain 303 519 4.9E-14 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CO704_RS02885 fc9dcb1842bc3f23eef2b7d13554a11b 369 Gene3D G3DSA:3.40.640.10 30 264 5.7E-23 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS02885 fc9dcb1842bc3f23eef2b7d13554a11b 369 Pfam PF03841 L-seryl-tRNA selenium transferase 14 268 6.6E-19 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS02885 fc9dcb1842bc3f23eef2b7d13554a11b 369 SUPERFAMILY SSF53383 11 365 4.51E-34 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS02885 fc9dcb1842bc3f23eef2b7d13554a11b 369 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 5 363 2.2E-161 T 28-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 SMART SM00382 32 231 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 SUPERFAMILY SSF52540 3 253 9.2E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 Pfam PF00005 ABC transporter 24 181 9.8E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 3.3E-27 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 Gene3D G3DSA:3.40.50.300 1 324 9.6E-76 T 28-03-2018 CO704_RS24495 522ee7e381a929cbebc494922f94e614 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.3E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS21580 b926841832a3ee4770ab81b516815a36 394 Gene3D G3DSA:3.30.70.270 62 266 1.5E-19 T 28-03-2018 CO704_RS21580 b926841832a3ee4770ab81b516815a36 394 SUPERFAMILY SSF56672 158 286 9.71E-25 T 28-03-2018 CO704_RS21580 b926841832a3ee4770ab81b516815a36 394 SUPERFAMILY SSF56672 14 128 9.71E-25 T 28-03-2018 CO704_RS21580 b926841832a3ee4770ab81b516815a36 394 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 34 125 5.9E-10 T 28-03-2018 IPR000477 Reverse transcriptase domain CO704_RS21580 b926841832a3ee4770ab81b516815a36 394 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 175 266 1.2E-10 T 28-03-2018 IPR000477 Reverse transcriptase domain CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 SMART SM00490 259 340 2.1E-31 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 461 51.73 T 28-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 SUPERFAMILY SSF52540 75 361 2.52E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 Gene3D G3DSA:3.40.50.300 7 223 4.5E-61 T 28-03-2018 CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 SMART SM00487 20 223 2.0E-61 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 Pfam PF00271 Helicase conserved C-terminal domain 235 339 1.1E-25 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 Gene3D G3DSA:3.40.50.300 224 463 6.5E-47 T 28-03-2018 CO704_RS16375 1b4d9e01f160d89766dc2cc1ae17d6fb 465 Pfam PF00270 DEAD/DEAH box helicase 25 196 4.2E-50 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 SUPERFAMILY SSF102816 3 109 6.67E-51 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 8.0E-52 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 1.0E-45 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 Gene3D G3DSA:3.10.450.140 10 108 1.7E-44 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 34.775 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS09890 37d422dce964f9389ed0e35be5d061bb 109 PIRSF PIRSF004916 1 109 5.7E-56 T 28-03-2018 IPR007376 dsDNA mimic, putative CO704_RS00610 ae9eba84b767faf72411275265858372 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 240 6.7E-15 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS00610 ae9eba84b767faf72411275265858372 345 Gene3D G3DSA:3.40.50.720 1 135 3.0E-33 T 28-03-2018 CO704_RS00610 ae9eba84b767faf72411275265858372 345 SUPERFAMILY SSF51735 3 195 1.07E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS00610 ae9eba84b767faf72411275265858372 345 Gene3D G3DSA:3.30.360.10 136 336 7.7E-32 T 28-03-2018 CO704_RS00610 ae9eba84b767faf72411275265858372 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 6.3E-24 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 4.7E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 Gene3D G3DSA:1.10.10.10 1 57 3.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 Gene3D G3DSA:3.30.70.920 59 150 2.1E-20 T 28-03-2018 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 3.6E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 3.5E-14 T 28-03-2018 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 SMART SM00344 6 113 6.4E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 SUPERFAMILY SSF46785 4 66 1.21E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24080 e146d94775d91861372f9586c7e494d7 152 SUPERFAMILY SSF54909 67 152 3.22E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Gene3D G3DSA:2.60.40.1730 15 194 2.3E-30 T 28-03-2018 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 SUPERFAMILY SSF63737 1 193 6.67E-45 T 28-03-2018 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Gene3D G3DSA:1.10.390.10 280 443 4.7E-53 T 28-03-2018 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 545 3.2E-34 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Gene3D G3DSA:1.25.50.10 547 870 1.0E-125 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 5.4E-121 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.4E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.4E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.4E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.4E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 Pfam PF01433 Peptidase family M1 domain 208 439 3.8E-61 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CO704_RS15480 6001e9f7b9c82cac5893edb1a808a5e5 870 SUPERFAMILY SSF55486 204 450 1.39E-76 T 28-03-2018 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 SUPERFAMILY SSF50331 1 71 1.43E-20 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 3.6E-22 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 75 140 1.8E-18 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 SUPERFAMILY SSF50331 47 138 7.05E-19 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 Pfam PF03459 TOBE domain 4 64 6.2E-15 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 Pfam PF03459 TOBE domain 76 137 2.1E-15 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 Gene3D G3DSA:2.40.50.100 65 132 5.7E-20 T 28-03-2018 CO704_RS11580 0d84bde7cafa83138b111fb6c60b6720 142 Gene3D G3DSA:2.40.50.100 1 64 2.3E-19 T 28-03-2018 CO704_RS18865 9c46452daaaad73770047af77d94f00b 165 SUPERFAMILY SSF117074 29 163 2.22E-16 T 28-03-2018 CO704_RS18865 9c46452daaaad73770047af77d94f00b 165 Gene3D G3DSA:2.60.40.1120 47 164 1.3E-9 T 28-03-2018 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Gene3D G3DSA:1.20.120.30 22 189 9.4E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Pfam PF02203 Tar ligand binding domain homologue 2 175 2.5E-41 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 SMART SM00283 268 515 1.1E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Pfam PF00672 HAMP domain 215 263 3.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Gene3D G3DSA:1.10.287.950 218 319 3.6E-12 T 28-03-2018 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 SUPERFAMILY SSF47170 24 180 4.32E-33 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 SMART SM00304 215 267 9.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 59 74 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 7.3E-85 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 1.2E-58 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 Gene3D G3DSA:1.10.287.950 320 519 9.8E-49 T 28-03-2018 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 SMART SM00319 43 181 1.3E-39 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS24385 9b7f32aa80ba23379821de213674f5f8 551 SUPERFAMILY SSF58104 235 516 7.59E-74 T 28-03-2018 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 SUPERFAMILY SSF51338 363 437 3.05E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 SUPERFAMILY SSF51338 4 58 3.05E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 4 440 5.8E-207 T 28-03-2018 IPR017700 Putative aminohydrolase SsnA CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 SUPERFAMILY SSF51556 58 356 5.45E-54 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 Gene3D G3DSA:2.30.40.10 3 70 1.1E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 Gene3D G3DSA:3.20.20.140 71 350 3.2E-26 T 28-03-2018 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 Gene3D G3DSA:2.30.40.10 351 441 7.3E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS10975 c8b12ef38a416182e9cb34ecb02acc9a 444 Pfam PF01979 Amidohydrolase family 55 412 3.3E-48 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 SUPERFAMILY SSF46785 8 86 2.27E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 Gene3D G3DSA:1.10.10.10 1 88 1.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 SUPERFAMILY SSF53850 93 299 2.71E-45 T 28-03-2018 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 Gene3D G3DSA:3.40.190.10 180 269 2.3E-27 T 28-03-2018 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 Gene3D G3DSA:3.40.190.10 93 179 1.7E-12 T 28-03-2018 CO704_RS06610 569868a636425a87fcbb9ae823be546c 300 Pfam PF03466 LysR substrate binding domain 94 297 1.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS25890 92015bac17be2d4ceea086d492361751 84 Gene3D G3DSA:3.10.490.10 44 84 0.0015 T 28-03-2018 CO704_RS25890 92015bac17be2d4ceea086d492361751 84 SUPERFAMILY SSF110857 6 82 2.09E-6 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CO704_RS25890 92015bac17be2d4ceea086d492361751 84 Gene3D G3DSA:3.10.490.10 5 43 0.0017 T 28-03-2018 CO704_RS15280 0c5443f87332e89d284cc52db93aabe7 110 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 107 8.2E-22 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CO704_RS15280 0c5443f87332e89d284cc52db93aabe7 110 SUPERFAMILY SSF50118 5 109 1.22E-28 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CO704_RS15280 0c5443f87332e89d284cc52db93aabe7 110 Gene3D G3DSA:2.30.30.110 2 110 6.2E-27 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CO704_RS14945 180f8192bc2f20b73cf34db63dd9f023 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 4.0E-45 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS14945 180f8192bc2f20b73cf34db63dd9f023 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 2.9E-163 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS14945 180f8192bc2f20b73cf34db63dd9f023 452 PIRSF PIRSF006351 1 449 8.4E-130 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS14945 180f8192bc2f20b73cf34db63dd9f023 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 2.9E-163 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS07450 fe067510eb52cd7bf4815404f6b8fd41 282 SUPERFAMILY SSF53448 8 233 7.69E-40 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07450 fe067510eb52cd7bf4815404f6b8fd41 282 Gene3D G3DSA:3.90.550.10 2 273 6.3E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07450 fe067510eb52cd7bf4815404f6b8fd41 282 Pfam PF00535 Glycosyl transferase family 2 11 116 5.5E-26 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS07450 fe067510eb52cd7bf4815404f6b8fd41 282 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 6 282 1.7E-179 T 28-03-2018 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA CO704_RS19585 ab004da44bb5e509fdd2fdffa758c297 65 SUPERFAMILY SSF57716 3 62 2.28E-22 T 28-03-2018 CO704_RS19585 ab004da44bb5e509fdd2fdffa758c297 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.648 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CO704_RS19585 ab004da44bb5e509fdd2fdffa758c297 65 Gene3D G3DSA:3.30.50.10 2 60 2.5E-27 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CO704_RS19585 ab004da44bb5e509fdd2fdffa758c297 65 Pfam PF03884 DNA gyrase inhibitor YacG 7 55 4.3E-25 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Gene3D G3DSA:2.130.10.10 393 469 7.9E-16 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Pfam PF10282 Lactonase, 7-bladed beta-propeller 370 442 2.1E-6 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Gene3D G3DSA:2.130.10.10 292 392 1.7E-6 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 SUPERFAMILY SSF51004 322 600 8.89E-34 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Gene3D G3DSA:1.20.1540.10 17 212 3.6E-35 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 378 419 9.2E-11 T 28-03-2018 IPR011964 YVTN beta-propeller repeat CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Gene3D G3DSA:2.130.10.10 470 645 4.3E-11 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 SUPERFAMILY SSF144091 17 213 1.31E-36 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS12465 0e094ecfed53019f8c68189819841d19 666 Pfam PF01694 Rhomboid family 60 211 1.2E-24 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS25170 e76acb37efe695668e45029d4beb30d7 161 Gene3D G3DSA:3.40.630.30 27 156 2.8E-15 T 28-03-2018 CO704_RS25170 e76acb37efe695668e45029d4beb30d7 161 Pfam PF13673 Acetyltransferase (GNAT) domain 32 149 1.3E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS25170 e76acb37efe695668e45029d4beb30d7 161 SUPERFAMILY SSF55729 14 148 1.81E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS16005 1f5de994c09feca4ef20398485718878 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 7.0E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS16005 1f5de994c09feca4ef20398485718878 85 SUPERFAMILY SSF159871 3 85 4.71E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS16005 1f5de994c09feca4ef20398485718878 85 Gene3D G3DSA:3.30.1660.10 22 85 2.0E-20 T 28-03-2018 IPR025543 Dodecin-like CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.2E-39 T 28-03-2018 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.2E-39 T 28-03-2018 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.2E-39 T 28-03-2018 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.2E-39 T 28-03-2018 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 8.4E-146 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 Gene3D G3DSA:3.40.50.720 1 119 2.4E-45 T 28-03-2018 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 Gene3D G3DSA:3.40.50.261 120 290 4.9E-55 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 Pfam PF02629 CoA binding domain 6 99 7.7E-32 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 SMART SM00881 4 100 8.9E-38 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.242 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 Pfam PF00549 CoA-ligase 151 271 1.9E-20 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 PIRSF PIRSF001553 1 290 2.2E-134 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 SUPERFAMILY SSF51735 1 122 1.67E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS16660 ec29061b189d74171308be2f94a831fd 290 SUPERFAMILY SSF52210 123 287 1.44E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS00255 042bfdb192149023719a2a6de9add643 109 Gene3D G3DSA:2.60.120.10 2 109 1.8E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS00255 042bfdb192149023719a2a6de9add643 109 SUPERFAMILY SSF51182 24 97 5.13E-9 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS09385 009fa607bae15ee8b9821ba7fb224cec 265 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 7.2E-65 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase CO704_RS09385 009fa607bae15ee8b9821ba7fb224cec 265 Gene3D G3DSA:3.40.630.40 2 264 1.1E-73 T 28-03-2018 CO704_RS09385 009fa607bae15ee8b9821ba7fb224cec 265 SUPERFAMILY SSF53187 5 261 1.26E-75 T 28-03-2018 CO704_RS09385 009fa607bae15ee8b9821ba7fb224cec 265 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 5 261 3.6E-107 T 28-03-2018 IPR010247 N-formylglutamate deformylase CO704_RS19100 29cda72e9afb21aebc7b745f55772935 267 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 53.123 T 28-03-2018 IPR022958 Uncharacterised protein family UPF0294 CO704_RS19100 29cda72e9afb21aebc7b745f55772935 267 SUPERFAMILY SSF56219 44 260 6.54E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS19100 29cda72e9afb21aebc7b745f55772935 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 6.3E-8 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS19100 29cda72e9afb21aebc7b745f55772935 267 Gene3D G3DSA:3.60.10.10 36 260 1.5E-16 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS00340 e3d7d772dd62993994d450e81918195e 680 SUPERFAMILY SSF55486 1 677 1.22E-213 T 28-03-2018 CO704_RS00340 e3d7d772dd62993994d450e81918195e 680 Gene3D G3DSA:1.20.1050.40 5 138 5.5E-38 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CO704_RS00340 e3d7d772dd62993994d450e81918195e 680 Pfam PF01432 Peptidase family M3 222 677 4.9E-172 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CO704_RS00340 e3d7d772dd62993994d450e81918195e 680 Gene3D G3DSA:1.10.1370.10 457 680 1.5E-68 T 28-03-2018 CO704_RS00340 e3d7d772dd62993994d450e81918195e 680 Gene3D G3DSA:1.10.1370.10 140 444 3.2E-61 T 28-03-2018 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.44 T 28-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Gene3D G3DSA:3.40.190.10 179 262 2.8E-8 T 28-03-2018 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 SUPERFAMILY SSF46785 4 110 1.78E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Gene3D G3DSA:1.10.10.10 2 83 1.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Pfam PF03466 LysR substrate binding domain 93 288 1.6E-13 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 SUPERFAMILY SSF53850 92 289 2.17E-20 T 28-03-2018 CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 3.8E-112 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CO704_RS02960 cadc3883873f2b85b37be734d98b80c7 299 Gene3D G3DSA:3.40.190.10 92 178 4.9E-35 T 28-03-2018 CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 4.8E-222 T 28-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 Pfam PF00266 Aminotransferase class-V 21 387 3.5E-139 T 28-03-2018 IPR000192 Aminotransferase class V domain CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 Gene3D G3DSA:3.90.1150.10 279 395 2.2E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 SUPERFAMILY SSF53383 5 396 3.23E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS03445 d8a9fb018b4173179cd570eadf76d26d 401 Gene3D G3DSA:3.40.640.10 31 278 1.5E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 32.472 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 Pfam PF00117 Glutamine amidotransferase class-I 4 201 1.4E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 PIRSF PIRSF000495 1 204 3.0E-67 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 1.5E-65 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 SUPERFAMILY SSF52317 2 202 1.78E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07610 a673dfafebc42b65327bc27ab9a1a031 204 Gene3D G3DSA:3.40.50.880 1 204 2.4E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 SUPERFAMILY SSF100879 241 349 5.3E-27 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Gene3D G3DSA:3.30.70.270 112 170 1.4E-22 T 28-03-2018 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Gene3D G3DSA:3.30.70.270 41 111 3.1E-25 T 28-03-2018 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 SUPERFAMILY SSF56672 1 234 4.27E-95 T 28-03-2018 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Gene3D G3DSA:1.10.150.20 171 242 7.9E-24 T 28-03-2018 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Gene3D G3DSA:3.30.1490.100 243 351 7.3E-30 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Pfam PF00817 impB/mucB/samB family 7 154 1.0E-49 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.491 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 341 7.6E-11 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS18975 1ce24b7151333d94e43cc0b55e253128 351 Pfam PF11798 IMS family HHH motif 167 197 1.7E-8 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 Pfam PF01380 SIS domain 138 266 5.8E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 Gene3D G3DSA:3.40.50.10490 98 285 9.4E-35 T 28-03-2018 CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 SUPERFAMILY SSF46689 17 89 5.2E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 SUPERFAMILY SSF53697 104 288 4.79E-41 T 28-03-2018 CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 Gene3D G3DSA:1.10.10.10 15 93 1.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22395 10e6746aef7a8ab6bd29acc2fae8ebd9 296 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 89 4.7E-24 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 Gene3D G3DSA:1.10.10.10 139 215 6.5E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 Pfam PF00072 Response regulator receiver domain 9 120 3.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 8.1E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 8.1E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 8.1E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 Gene3D G3DSA:3.40.50.2300 6 138 3.4E-36 T 28-03-2018 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 SMART SM00421 153 210 9.4E-26 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 SUPERFAMILY SSF52172 7 135 5.83E-35 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.7E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 SMART SM00448 7 120 2.2E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 SUPERFAMILY SSF46894 146 213 1.77E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS09725 a2de55bc0f3476160047c561eefad506 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 SUPERFAMILY SSF46689 12 83 1.49E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 6.1E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 6.1E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 4.9E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 Gene3D G3DSA:1.10.10.60 9 70 1.2E-19 T 28-03-2018 CO704_RS14425 653e921f96c943890f29f25d746bf246 211 SUPERFAMILY SSF48498 93 204 5.72E-24 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS14425 653e921f96c943890f29f25d746bf246 211 Gene3D G3DSA:1.10.357.10 71 205 6.8E-20 T 28-03-2018 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 2.6E-83 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.6E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.6E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.6E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.6E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.6E-38 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 PIRSF PIRSF039101 1 505 2.6E-205 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.0E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 Gene3D G3DSA:2.40.50.140 15 154 1.8E-41 T 28-03-2018 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 1.5E-234 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 Gene3D G3DSA:3.30.930.10 156 501 1.2E-104 T 28-03-2018 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 SUPERFAMILY SSF55681 162 502 1.13E-123 T 28-03-2018 CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 SUPERFAMILY SSF50249 14 155 2.69E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS03115 d0da207f75bb2fc94d07688d6e1a83de 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.541 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 352 372 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 197 215 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 393 412 5.6E-6 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 Gene3D G3DSA:1.20.1250.20 2 192 3.2E-27 T 28-03-2018 CO704_RS07780 8840b74389522efe617737438f96bda4 458 Pfam PF07690 Major Facilitator Superfamily 12 402 4.0E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07780 8840b74389522efe617737438f96bda4 458 SUPERFAMILY SSF103473 241 446 2.62E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07780 8840b74389522efe617737438f96bda4 458 SUPERFAMILY SSF103473 2 188 2.62E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07780 8840b74389522efe617737438f96bda4 458 Gene3D G3DSA:1.20.1250.20 245 458 3.5E-20 T 28-03-2018 CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 SUPERFAMILY SSF89963 91 163 5.75E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 Gene3D G3DSA:3.30.70.860 98 162 4.7E-33 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.04 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 Gene3D G3DSA:3.30.70.990 10 97 5.2E-31 T 28-03-2018 IPR035570 UPF0234 N-terminal domain CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 SUPERFAMILY SSF89963 2 89 1.7E-30 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CO704_RS18255 d30c6f042e90010cc89d1a8d8721f2e5 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.5E-65 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 SUPERFAMILY SSF52172 6 135 7.4E-43 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 Gene3D G3DSA:1.10.10.10 137 241 9.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 SUPERFAMILY SSF46894 136 236 3.4E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 3.5E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 Pfam PF00072 Response regulator receiver domain 7 118 1.5E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 Gene3D G3DSA:3.40.50.2300 5 136 3.5E-39 T 28-03-2018 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 SMART SM00448 5 117 7.2E-42 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS20610 15817b8f277cf348a4ebcfb8242cc161 246 SMART SM00862 159 235 8.3E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Gene3D G3DSA:3.30.413.10 425 560 9.3E-24 T 28-03-2018 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 4.7E-14 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 5.9E-14 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 546 9.9E-4 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 5.0E-46 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Gene3D G3DSA:3.30.413.10 80 143 0.22 T 28-03-2018 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Gene3D G3DSA:3.30.413.10 144 345 1.1E-46 T 28-03-2018 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 SUPERFAMILY SSF55124 346 422 1.59E-21 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 SUPERFAMILY SSF56014 428 559 1.03E-33 T 28-03-2018 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.1E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.1E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 SUPERFAMILY SSF55124 13 142 9.49E-27 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 8.5E-294 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 SUPERFAMILY SSF56014 150 344 3.01E-59 T 28-03-2018 CO704_RS03650 62935f79b29f73ea92c9e5ecf8fa7a11 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.044 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF52540 351 463 1.04E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF141259 467 545 1.83E-23 T 28-03-2018 IPR003711 CarD-like/TRCF domain CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 4.1E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SMART SM00487 597 787 5.9E-34 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SMART SM00490 823 907 1.3E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Gene3D G3DSA:3.40.50.300 786 953 3.3E-26 T 28-03-2018 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 906 9.0E-18 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 9.7E-20 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SMART SM01058 476 573 3.7E-49 T 28-03-2018 IPR003711 CarD-like/TRCF domain CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.766 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF52540 779 987 2.99E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Gene3D G3DSA:3.30.2060.10 130 198 1.6E-5 T 28-03-2018 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SMART SM00982 1005 1105 9.8E-50 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF52540 10 340 8.36E-101 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF52540 520 780 6.14E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Gene3D G3DSA:3.40.50.300 199 785 3.2E-42 T 28-03-2018 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 Pfam PF03461 TRCF domain 1006 1097 8.6E-29 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 SUPERFAMILY SSF143517 992 1144 6.28E-45 T 28-03-2018 CO704_RS14410 d90e5672f34eaf18ba8168c65c101c07 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CO704_RS00450 99088a1e12e3f0d74017f66e002071d8 103 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 91 3.9E-19 T 28-03-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 534 5.3E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Pfam PF00072 Response regulator receiver domain 828 937 7.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 942 26.949 T 28-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SMART SM00387 582 693 9.5E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 710 800 9.3E-32 T 28-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SMART SM00388 470 535 1.7E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SUPERFAMILY SSF55874 524 695 2.88E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Gene3D G3DSA:1.10.287.130 474 529 4.2E-18 T 28-03-2018 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SUPERFAMILY SSF52172 825 948 4.13E-38 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SMART SM00448 826 937 5.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 2.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 632 2.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 646 2.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 2.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SUPERFAMILY SSF52172 701 815 1.62E-36 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Gene3D G3DSA:3.40.50.2300 819 951 1.7E-40 T 28-03-2018 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 692 7.7E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Gene3D G3DSA:3.30.450.20 324 473 3.4E-6 T 28-03-2018 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 SUPERFAMILY SSF47384 454 536 7.06E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS06725 7d828b52c64a236d84e0a40f0e3403b0 951 Gene3D G3DSA:3.30.565.10 530 693 1.0E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS10110 3a8f0a65cee840884e7d3c13ab613b98 479 PIRSF PIRSF007349 1 479 3.3E-126 T 28-03-2018 IPR007067 Tail sheath protein CO704_RS10110 3a8f0a65cee840884e7d3c13ab613b98 479 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 210 367 1.4E-11 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CO704_RS10110 3a8f0a65cee840884e7d3c13ab613b98 479 Pfam PF17482 Phage tail sheath C-terminal domain 376 478 1.7E-11 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CO704_RS16960 3a8f0a65cee840884e7d3c13ab613b98 479 PIRSF PIRSF007349 1 479 3.3E-126 T 28-03-2018 IPR007067 Tail sheath protein CO704_RS16960 3a8f0a65cee840884e7d3c13ab613b98 479 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 210 367 1.4E-11 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CO704_RS16960 3a8f0a65cee840884e7d3c13ab613b98 479 Pfam PF17482 Phage tail sheath C-terminal domain 376 478 1.7E-11 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.711 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 5.3E-128 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 Pfam PF00814 Glycoprotease family 24 307 1.6E-103 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 Gene3D G3DSA:3.30.420.40 1 144 2.6E-42 T 28-03-2018 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 SUPERFAMILY SSF53067 1 309 4.53E-45 T 28-03-2018 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 9.0E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 Gene3D G3DSA:3.30.420.40 145 288 2.1E-18 T 28-03-2018 CO704_RS20315 13b1e0dc3580b0d50118345893f59dca 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.4E-135 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CO704_RS03195 77bb40ab40b1e5c588cc5fce6c934fb3 180 Pfam PF01638 HxlR-like helix-turn-helix 20 105 4.4E-21 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CO704_RS03195 77bb40ab40b1e5c588cc5fce6c934fb3 180 SUPERFAMILY SSF46785 7 144 1.91E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03195 77bb40ab40b1e5c588cc5fce6c934fb3 180 Gene3D G3DSA:1.10.10.10 1 168 2.7E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 Gene3D G3DSA:2.60.120.520 24 131 9.8E-49 T 28-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 PIRSF PIRSF006625 1 278 3.2E-134 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 SUPERFAMILY SSF51182 1 262 1.93E-103 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.208 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 Gene3D G3DSA:2.60.120.10 132 278 1.6E-51 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS11355 c51ca6eb0fada66051a6b2c5c17bd3c6 278 Pfam PF04962 KduI/IolB family 34 273 1.0E-33 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CO704_RS11505 e6af96873a7370f8eb5e28739273d27b 286 SUPERFAMILY SSF161098 80 267 1.7E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11505 e6af96873a7370f8eb5e28739273d27b 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 279 1.4E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11505 e6af96873a7370f8eb5e28739273d27b 286 Gene3D G3DSA:1.10.3720.10 5 275 7.0E-43 T 28-03-2018 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 SMART SM01120 381 546 4.9E-34 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 Gene3D G3DSA:3.40.50.10440 12 185 1.2E-67 T 28-03-2018 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 Pfam PF02734 DAK2 domain 382 544 1.1E-34 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 SUPERFAMILY SSF101473 346 545 6.28E-44 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 Pfam PF02733 Dak1 domain 37 323 1.1E-97 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 SUPERFAMILY SSF82549 2 330 5.49E-102 T 28-03-2018 CO704_RS25795 19e88d0970a323e8d298f4d3db1fd608 549 Gene3D G3DSA:3.30.1180.20 186 334 2.9E-36 T 28-03-2018 CO704_RS14445 1ef3b23ed87e30ea560a1b829a9542fa 315 SMART SM01006 146 193 2.7E-18 T 28-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain CO704_RS14445 1ef3b23ed87e30ea560a1b829a9542fa 315 Gene3D G3DSA:3.40.630.30 110 311 2.4E-22 T 28-03-2018 CO704_RS14445 1ef3b23ed87e30ea560a1b829a9542fa 315 SUPERFAMILY SSF55729 116 306 1.22E-57 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS14445 1ef3b23ed87e30ea560a1b829a9542fa 315 Pfam PF13523 Acetyltransferase (GNAT) domain 149 294 6.5E-51 T 28-03-2018 CO704_RS03615 a7a78d5d44cb55a4bbbd381534369cf4 259 Gene3D G3DSA:3.40.50.620 1 255 2.1E-32 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS03615 a7a78d5d44cb55a4bbbd381534369cf4 259 SMART SM00893 26 216 0.0082 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CO704_RS03615 a7a78d5d44cb55a4bbbd381534369cf4 259 Pfam PF01012 Electron transfer flavoprotein domain 45 183 9.8E-15 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CO704_RS03615 a7a78d5d44cb55a4bbbd381534369cf4 259 SUPERFAMILY SSF52402 1 249 7.67E-30 T 28-03-2018 CO704_RS25655 24d393166d16c51ddafd786f2e484503 140 SUPERFAMILY SSF54637 7 135 3.4E-33 T 28-03-2018 IPR029069 HotDog domain CO704_RS25655 24d393166d16c51ddafd786f2e484503 140 Pfam PF13279 Thioesterase-like superfamily 15 123 9.3E-12 T 28-03-2018 CO704_RS25655 24d393166d16c51ddafd786f2e484503 140 Gene3D G3DSA:3.10.129.10 2 138 1.2E-27 T 28-03-2018 CO704_RS25655 24d393166d16c51ddafd786f2e484503 140 PIRSF PIRSF003230 3 135 1.0E-21 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CO704_RS25165 b479c307238c7018eafa30e5478d458c 88 Gene3D G3DSA:1.20.5.780 3 82 1.1E-23 T 28-03-2018 CO704_RS25165 b479c307238c7018eafa30e5478d458c 88 Pfam PF08681 Protein of unknown function (DUF1778) 6 82 2.0E-24 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 CO704_RS25165 b479c307238c7018eafa30e5478d458c 88 SUPERFAMILY SSF47598 4 80 1.33E-19 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS15030 8286c230eef1f7efbdc0f39f6e6ad350 75 Pfam PF13993 YccJ-like protein 9 75 1.5E-40 T 28-03-2018 IPR025600 YccJ-like protein CO704_RS22635 7a6641868ad415c218ef0e175387dd9f 167 Gene3D G3DSA:2.60.120.10 5 165 4.4E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22635 7a6641868ad415c218ef0e175387dd9f 167 Pfam PF07883 Cupin domain 47 118 5.9E-18 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS22635 7a6641868ad415c218ef0e175387dd9f 167 SUPERFAMILY SSF51182 31 146 8.02E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS08550 06fc69c822f90312c51b5367dbaaf66d 453 SUPERFAMILY SSF89796 34 185 4.58E-18 T 28-03-2018 IPR023606 CoA-transferase family III domain CO704_RS08550 06fc69c822f90312c51b5367dbaaf66d 453 Gene3D G3DSA:3.30.1540.10 93 179 5.6E-10 T 28-03-2018 CO704_RS08550 06fc69c822f90312c51b5367dbaaf66d 453 Gene3D G3DSA:3.40.50.10540 194 420 5.2E-65 T 28-03-2018 IPR023606 CoA-transferase family III domain CO704_RS08550 06fc69c822f90312c51b5367dbaaf66d 453 Pfam PF02515 CoA-transferase family III 200 398 3.6E-46 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 CO704_RS08550 06fc69c822f90312c51b5367dbaaf66d 453 SUPERFAMILY SSF89796 197 415 4.32E-57 T 28-03-2018 IPR023606 CoA-transferase family III domain CO704_RS05250 b98df969b71d2d9fdace8ba10a394a47 299 Pfam PF13531 Bacterial extracellular solute-binding protein 18 288 1.2E-47 T 28-03-2018 CO704_RS05250 b98df969b71d2d9fdace8ba10a394a47 299 SUPERFAMILY SSF53850 15 291 2.8E-38 T 28-03-2018 CO704_RS05250 b98df969b71d2d9fdace8ba10a394a47 299 Gene3D G3DSA:3.40.190.10 180 250 3.3E-18 T 28-03-2018 CO704_RS05250 b98df969b71d2d9fdace8ba10a394a47 299 Gene3D G3DSA:3.40.190.10 110 179 1.7E-18 T 28-03-2018 CO704_RS05250 b98df969b71d2d9fdace8ba10a394a47 299 Gene3D G3DSA:3.40.190.10 12 109 7.9E-8 T 28-03-2018 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 SMART SM00855 5 191 3.3E-27 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 6.3E-127 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 7.0E-31 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 225 3.7E-5 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.446 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 SUPERFAMILY SSF53254 4 247 8.54E-78 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 PIRSF PIRSF000709 3 116 6.7E-9 T 28-03-2018 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 PIRSF PIRSF000709 148 238 0.014 T 28-03-2018 CO704_RS16560 826c3a50079a5709a7a4d4aac887a8cf 250 Gene3D G3DSA:3.40.50.1240 2 250 1.2E-68 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Gene3D G3DSA:1.10.150.80 533 605 1.4E-25 T 28-03-2018 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Pfam PF00271 Helicase conserved C-terminal domain 225 330 2.0E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SMART SM00956 411 514 1.8E-50 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SMART SM00490 250 331 6.1E-28 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Pfam PF16124 RecQ zinc-binding 343 404 2.3E-15 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SMART SM00487 22 218 2.1E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Gene3D G3DSA:3.40.50.300 2 208 2.8E-37 T 28-03-2018 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Pfam PF00270 DEAD/DEAH box helicase 28 186 2.4E-19 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Pfam PF09382 RQC domain 406 514 1.3E-36 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SUPERFAMILY SSF47819 530 604 3.92E-26 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 463 1.9E-203 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Gene3D G3DSA:3.40.50.300 210 402 1.7E-48 T 28-03-2018 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Gene3D G3DSA:1.10.10.10 403 525 7.1E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SMART SM00341 529 609 2.7E-28 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SUPERFAMILY SSF52540 12 201 3.12E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 Pfam PF00570 HRDC domain 533 599 8.8E-24 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 601 6.5E-270 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CO704_RS23180 d8b0f1b000ff4b0e423f4461f39dd5c7 609 SUPERFAMILY SSF52540 208 453 2.05E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Gene3D G3DSA:2.60.40.1250 20 144 8.1E-38 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 SUPERFAMILY SSF74863 26 140 1.83E-40 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Gene3D G3DSA:3.40.30.10 452 576 1.1E-17 T 28-03-2018 CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 SUPERFAMILY SSF52833 458 572 3.75E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Pfam PF11412 Disulphide bond corrector protein DsbC 28 137 1.1E-33 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Pfam PF13899 Thioredoxin-like 470 547 1.6E-11 T 28-03-2018 CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 575 40.048 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CO704_RS21420 67736b74f60e62c30ff4b9e520f37af5 576 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 181 387 3.7E-19 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 4.9E-148 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 SUPERFAMILY SSF51735 1 337 7.13E-102 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 Gene3D G3DSA:3.90.25.10 256 337 1.3E-19 T 28-03-2018 CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 Gene3D G3DSA:3.90.25.10 208 255 1.5E-12 T 28-03-2018 CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 Gene3D G3DSA:3.40.50.720 1 207 2.7E-45 T 28-03-2018 CO704_RS16540 62259ed3e9c2f3f49b9f3ce4b5e59c3d 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.0E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 Gene3D G3DSA:3.30.1180.20 186 335 4.6E-33 T 28-03-2018 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 SMART SM01120 382 546 9.7E-44 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 SUPERFAMILY SSF101473 356 545 1.7E-47 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 Pfam PF02733 Dak1 domain 34 324 1.6E-97 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 SUPERFAMILY SSF82549 2 329 1.46E-101 T 28-03-2018 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 Pfam PF02734 DAK2 domain 382 545 9.0E-36 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS02080 e964c5affeec1a14c6d5e5e0431ec74d 546 Gene3D G3DSA:3.40.50.10440 12 185 1.2E-69 T 28-03-2018 CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 SUPERFAMILY SSF51556 1 258 2.21E-86 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 PIRSF PIRSF005902 1 259 1.5E-73 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 Pfam PF01026 TatD related DNase 4 255 1.0E-73 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.2E-93 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CO704_RS14515 c99861abf75dc23b858b4f17e3ad4d1f 264 Gene3D G3DSA:3.20.20.140 1 263 4.1E-79 T 28-03-2018 CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 Pfam PF07848 PaaX-like protein 20 87 2.5E-29 T 28-03-2018 IPR012906 PaaX-like, N-terminal CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 PIRSF PIRSF020623 1 307 3.8E-126 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 Pfam PF08223 PaaX-like protein C-terminal domain 184 282 4.5E-29 T 28-03-2018 IPR013225 PaaX-like, C-terminal CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 SUPERFAMILY SSF46785 32 101 4.95E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 Gene3D G3DSA:1.10.10.10 18 101 3.9E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12575 b5e62c3892e638c9c696d52fdeca5019 308 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 304 6.7E-111 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 28-03-2018 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 SUPERFAMILY SSF56553 53 178 2.27E-41 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.612 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 28-03-2018 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Gene3D G3DSA:3.30.1360.10 119 231 5.9E-28 T 28-03-2018 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 28-03-2018 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 7.0E-113 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 SMART SM00662 23 234 5.3E-105 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS01220 519cb53a7c09362a1e3e471d80b80539 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS05620 4a640159d81b95e11faa97a20f0a9de8 762 Pfam PF00884 Sulfatase 162 445 4.0E-22 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS05620 4a640159d81b95e11faa97a20f0a9de8 762 SUPERFAMILY SSF53649 160 458 3.05E-26 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS05620 4a640159d81b95e11faa97a20f0a9de8 762 Gene3D G3DSA:3.40.720.10 153 447 1.1E-27 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS06620 6c569f14d6a2c9fe7646b1fa753d4cb1 155 Gene3D G3DSA:3.40.630.30 1 155 3.3E-32 T 28-03-2018 CO704_RS06620 6c569f14d6a2c9fe7646b1fa753d4cb1 155 Pfam PF13673 Acetyltransferase (GNAT) domain 46 147 4.0E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS06620 6c569f14d6a2c9fe7646b1fa753d4cb1 155 SUPERFAMILY SSF55729 1 149 8.15E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 Gene3D G3DSA:3.40.50.300 1 237 1.0E-59 T 28-03-2018 CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 Pfam PF00005 ABC transporter 21 165 3.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 PIRSF PIRSF039137 1 237 3.2E-103 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 SUPERFAMILY SSF52540 4 234 5.11E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 SMART SM00382 30 216 4.9E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00565 7920139ffd38910259a0edd5c9d86fc9 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS25725 5736d211a76e54051c1b6d8c09ae4cc6 124 SUPERFAMILY SSF74653 43 124 1.37E-7 T 28-03-2018 CO704_RS25725 5736d211a76e54051c1b6d8c09ae4cc6 124 Gene3D G3DSA:3.30.1150.10 42 124 9.3E-4 T 28-03-2018 CO704_RS25725 5736d211a76e54051c1b6d8c09ae4cc6 124 Pfam PF06519 TolA C-terminal 39 121 1.5E-9 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 3.8E-85 T 28-03-2018 CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 SUPERFAMILY SSF51735 6 253 1.77E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 PIRSF PIRSF000094 1 260 2.6E-124 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10435 49ea6ae352323ba182e6a29200fa2711 263 Gene3D G3DSA:3.40.50.720 3 262 1.0E-44 T 28-03-2018 CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 192 3.6E-6 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 SUPERFAMILY SSF47616 72 199 2.27E-17 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 4.2E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 SUPERFAMILY SSF52833 1 100 3.45E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 Gene3D G3DSA:1.20.1050.10 89 201 3.8E-14 T 28-03-2018 CO704_RS00205 2303ba5bbea540dd3f6c07762d7717b9 202 Gene3D G3DSA:3.40.30.10 1 88 3.4E-17 T 28-03-2018 CO704_RS20920 b8b09546c81665e2eb7abd6e0d124b57 91 SUPERFAMILY SSF159871 7 90 1.01E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS20920 b8b09546c81665e2eb7abd6e0d124b57 91 Gene3D G3DSA:3.30.1660.10 32 90 1.9E-19 T 28-03-2018 IPR025543 Dodecin-like CO704_RS20920 b8b09546c81665e2eb7abd6e0d124b57 91 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 4.8E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS06935 e773cc5e2ae6b48e8420f381e02ba18f 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 8.1E-152 T 28-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CO704_RS06935 e773cc5e2ae6b48e8420f381e02ba18f 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 1.5E-112 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:1.20.120.160 643 765 7.2E-17 T 28-03-2018 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:1.10.287.970 3 88 9.1E-38 T 28-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SMART SM00448 527 640 2.8E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 PIRSF PIRSF003182 1 780 0.0 T 28-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SUPERFAMILY SSF55874 336 504 7.99E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SMART SM00388 282 347 2.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Pfam PF01627 Hpt domain 688 761 2.9E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Pfam PF00989 PAS fold 156 266 2.3E-17 T 28-03-2018 IPR013767 PAS fold GO:0006355 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 7.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 7.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 7.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 7.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:3.40.50.2300 513 642 1.8E-28 T 28-03-2018 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SUPERFAMILY SSF47226 663 776 2.62E-28 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SUPERFAMILY SSF47384 269 347 4.51E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:3.30.450.20 105 279 2.3E-23 T 28-03-2018 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:1.10.287.130 280 341 3.1E-17 T 28-03-2018 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Gene3D G3DSA:3.30.565.10 342 508 2.3E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SUPERFAMILY SSF52172 527 656 8.4E-27 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SMART SM00073 677 774 1.0E-19 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SMART SM00387 394 508 4.4E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Pfam PF00072 Response regulator receiver domain 529 640 4.4E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 2.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.2E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.6E-14 T 28-03-2018 IPR000014 PAS domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SMART SM00091 155 221 1.3E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS01580 ad55130f105ac7204bc3597c8b356c40 780 SUPERFAMILY SSF55785 142 267 3.66E-19 T 28-03-2018 IPR000014 PAS domain CO704_RS24935 d21465511ed56a4e5caf472bb7e15a13 140 Gene3D G3DSA:1.10.10.60 74 138 1.8E-6 T 28-03-2018 CO704_RS24935 d21465511ed56a4e5caf472bb7e15a13 140 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 39 138 1.4E-16 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Pfam PF00679 Elongation factor G C-terminus 398 478 5.5E-21 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 135 6.0E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:3.40.50.300 69 189 1.1E-29 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:3.30.70.870 303 401 3.4E-32 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 PRINTS PR00315 GTP-binding elongation factor signature 72 82 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 PRINTS PR00315 GTP-binding elongation factor signature 88 99 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 PRINTS PR00315 GTP-binding elongation factor signature 52 60 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 PRINTS PR00315 GTP-binding elongation factor signature 124 133 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:2.40.30.10 190 301 7.2E-23 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 SUPERFAMILY SSF50447 152 300 8.62E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 SUPERFAMILY SSF54980 399 513 1.58E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:3.30.70.240 402 483 3.6E-18 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:3.40.50.300 2 68 1.1E-10 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Pfam PF00009 Elongation factor Tu GTP binding domain 4 196 5.4E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Gene3D G3DSA:2.40.50.250 484 574 1.7E-37 T 28-03-2018 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 SUPERFAMILY SSF54980 303 388 2.45E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 SUPERFAMILY SSF52540 3 208 2.37E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.8E-11 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CO704_RS23925 c96bdb45e1ffb882a37831ed69a4eaab 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 5.0E-290 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 Pfam PF00232 Glycosyl hydrolase family 1 3 459 3.1E-153 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 1.6E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 1.6E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 1.6E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 1.6E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 1.6E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 Gene3D G3DSA:3.20.20.80 1 463 4.4E-151 T 28-03-2018 CO704_RS16345 741cfd58d9e0b6e7712b37d4fbca09e7 464 SUPERFAMILY SSF51445 2 455 4.81E-160 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Gene3D G3DSA:3.40.140.20 226 375 9.8E-55 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 SMART SM00851 19 132 3.3E-64 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 SMART SM00798 137 461 1.7E-217 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Gene3D G3DSA:3.40.50.1380 1 196 4.2E-78 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Pfam PF02142 MGS-like domain 19 132 3.1E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.2E-263 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.494 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 SUPERFAMILY SSF53927 221 529 9.63E-131 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 PIRSF PIRSF000414 1 529 6.5E-228 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 SUPERFAMILY SSF52335 7 197 1.7E-71 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 5.6E-119 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS22840 ab2e725d879d02d5626d8aa96034456e 529 Gene3D G3DSA:3.40.140.20 376 519 1.5E-53 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 Gene3D G3DSA:3.40.50.1860 118 215 9.0E-22 T 28-03-2018 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 Gene3D G3DSA:3.40.50.1860 1 117 1.1E-28 T 28-03-2018 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 SUPERFAMILY SSF53681 1 116 2.4E-36 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 6.5E-56 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 6.6E-65 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS03280 e3da143645611e73d9d2943999de8b0b 232 SUPERFAMILY SSF53681 119 229 8.18E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 329 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 249 270 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 387 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 282 306 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 352 367 8.2E-38 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 181 387 1.4E-62 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 Pfam PF13533 Biotin-lipoyl like 59 91 5.9E-8 T 28-03-2018 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 Gene3D G3DSA:2.40.50.100 44 273 3.2E-17 T 28-03-2018 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 ProSitePatterns PS00543 HlyD family secretion proteins signature. 352 374 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CO704_RS04325 2fa3c0f5c836a7185309bceee438c49c 387 Pfam PF13437 HlyD family secretion protein 236 340 4.4E-16 T 28-03-2018 CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 SUPERFAMILY SSF74650 45 421 1.16E-146 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 58.999 T 28-03-2018 IPR023724 Glucan biosynthesis, MdoD CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 4.9E-181 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 Gene3D G3DSA:2.70.98.10 45 419 8.9E-156 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 SUPERFAMILY SSF81296 423 537 7.7E-28 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 PIRSF PIRSF006281 1 538 1.0E-199 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CO704_RS13135 cbf60d4fe9da3fc57f5211506b077d49 551 Gene3D G3DSA:2.60.40.10 423 538 5.1E-28 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 Pfam PF17206 SeqA protein N-terminal domain 1 36 2.8E-24 T 28-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 SUPERFAMILY SSF47598 1 35 5.34E-14 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 Gene3D G3DSA:1.20.1380.10 76 178 8.6E-44 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 182 44.92 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 PIRSF PIRSF019401 1 182 7.9E-52 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 Gene3D G3DSA:1.10.1220.10 1 37 6.0E-26 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 SUPERFAMILY SSF82808 67 182 5.62E-50 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CO704_RS17050 91ab12b62bd0f72af777d12dfc704f72 182 Pfam PF03925 SeqA protein C-terminal domain 72 180 3.8E-50 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CO704_RS22210 7be6d9947d2c518d63b7fb9268f6a9cd 280 Gene3D G3DSA:3.40.50.1980 20 127 1.2E-26 T 28-03-2018 CO704_RS22210 7be6d9947d2c518d63b7fb9268f6a9cd 280 SUPERFAMILY SSF53807 22 275 9.81E-54 T 28-03-2018 CO704_RS22210 7be6d9947d2c518d63b7fb9268f6a9cd 280 Pfam PF01497 Periplasmic binding protein 25 251 6.2E-28 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS22210 7be6d9947d2c518d63b7fb9268f6a9cd 280 Gene3D G3DSA:3.40.50.1980 128 280 5.2E-32 T 28-03-2018 CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 Gene3D G3DSA:2.30.30.410 16 91 4.5E-10 T 28-03-2018 CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 Pfam PF08239 Bacterial SH3 domain 36 83 2.5E-9 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 28 205 5.5E-52 T 28-03-2018 IPR016476 SH3 domain protein CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 Gene3D G3DSA:1.20.5.50 92 171 9.7E-7 T 28-03-2018 CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 SMART SM00287 24 90 1.5E-11 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type CO704_RS20280 dc62f1218da171dac395e35c0825206e 207 PIRSF PIRSF006158 1 206 2.5E-70 T 28-03-2018 IPR016476 SH3 domain protein CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 SUPERFAMILY SSF51569 7 335 1.71E-143 T 28-03-2018 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 9.3E-56 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 Gene3D G3DSA:3.20.20.70 2 337 5.3E-151 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 SMART SM01004 9 333 5.5E-238 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 PIRSF PIRSF001415 2 336 8.0E-152 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS23090 979b618a63e78bcac89f0eff6f1587b3 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 5.8E-140 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 154 168 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 SUPERFAMILY SSF55120 109 328 9.92E-67 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 Pfam PF00849 RNA pseudouridylate synthase 115 262 3.3E-29 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 SUPERFAMILY SSF55174 33 84 1.7E-9 T 28-03-2018 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 Gene3D G3DSA:3.30.2350.10 106 331 1.4E-68 T 28-03-2018 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 Pfam PF01479 S4 domain 34 80 2.5E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 SMART SM00363 34 93 2.6E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 30 328 3.1E-98 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS14585 0f067545da69caf8f77ca31e2df8d6de 331 Gene3D G3DSA:3.10.290.10 22 93 1.6E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS02370 ae3993747bfde36f32abb5b0a17c0512 173 Pfam PF00419 Fimbrial protein 32 172 3.1E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS02370 ae3993747bfde36f32abb5b0a17c0512 173 Gene3D G3DSA:2.60.40.1090 29 173 1.0E-33 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS02370 ae3993747bfde36f32abb5b0a17c0512 173 SUPERFAMILY SSF49401 30 173 1.84E-32 T 28-03-2018 IPR008966 Adhesion domain CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 Pfam PF01202 Shikimate kinase 11 168 9.3E-46 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 40.783 T 28-03-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.725 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 PRINTS PR01100 Shikimate kinase family signature 74 83 8.4E-22 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 PRINTS PR01100 Shikimate kinase family signature 5 20 8.4E-22 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 PRINTS PR01100 Shikimate kinase family signature 95 112 8.4E-22 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 PRINTS PR01100 Shikimate kinase family signature 57 65 8.4E-22 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 PRINTS PR01100 Shikimate kinase family signature 29 42 8.4E-22 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 Gene3D G3DSA:3.40.50.300 1 174 5.6E-29 T 28-03-2018 CO704_RS18460 4ec492ac37bc902d44ff1e78019ba7d6 174 SUPERFAMILY SSF52540 4 170 2.54E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00715 bc7b15c50a1617a18e4ed5294cca23f0 227 SUPERFAMILY SSF53271 44 225 8.92E-36 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS00715 bc7b15c50a1617a18e4ed5294cca23f0 227 Pfam PF00156 Phosphoribosyl transferase domain 135 224 6.0E-11 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS00715 bc7b15c50a1617a18e4ed5294cca23f0 227 Gene3D G3DSA:3.40.50.2020 56 227 5.1E-30 T 28-03-2018 CO704_RS12775 05cf07faa003b32f37fcc546c321f23f 148 Pfam PF13211 Protein of unknown function (DUF4019) 37 142 2.7E-24 T 28-03-2018 IPR025091 Protein of unknown function DUF4019 CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 SUPERFAMILY SSF46785 1 113 2.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 Gene3D G3DSA:3.40.190.10 179 262 2.8E-4 T 28-03-2018 CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 Pfam PF03466 LysR substrate binding domain 90 289 8.2E-16 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 SUPERFAMILY SSF53850 88 291 6.88E-22 T 28-03-2018 CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 5.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 Gene3D G3DSA:3.40.190.10 90 178 3.4E-10 T 28-03-2018 CO704_RS18390 6f93d957d6fb2031e7d6e7453cc4e080 305 Gene3D G3DSA:1.10.10.10 1 84 5.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.7E-73 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 Gene3D G3DSA:3.90.930.12 86 177 5.1E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 PIRSF PIRSF002162 1 177 3.8E-45 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 SUPERFAMILY SSF56053 1 82 2.75E-23 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.4E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 SUPERFAMILY SSF56053 83 177 1.01E-35 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 Gene3D G3DSA:3.90.930.12 5 85 2.1E-25 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.403 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 Pfam PF00347 Ribosomal protein L6 11 82 1.4E-19 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01170 d5ddf9ebaf1729caf6106bec38bf36c7 177 Pfam PF00347 Ribosomal protein L6 90 164 8.4E-19 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS05390 447d65950009e22e453ce855c3340f8a 183 Pfam PF00156 Phosphoribosyl transferase domain 32 156 5.1E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS05390 447d65950009e22e453ce855c3340f8a 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 9.2E-73 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CO704_RS05390 447d65950009e22e453ce855c3340f8a 183 SUPERFAMILY SSF53271 12 180 5.68E-53 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS05390 447d65950009e22e453ce855c3340f8a 183 Gene3D G3DSA:3.40.50.2020 4 180 3.0E-43 T 28-03-2018 CO704_RS05390 447d65950009e22e453ce855c3340f8a 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.149 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Pfam PF08245 Mur ligase middle domain 110 280 4.0E-29 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 3.8E-129 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Gene3D G3DSA:3.40.50.720 1 94 1.4E-14 T 28-03-2018 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 SUPERFAMILY SSF53623 95 297 1.3E-57 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Gene3D G3DSA:3.90.190.20 300 434 2.3E-35 T 28-03-2018 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 SUPERFAMILY SSF51984 3 94 7.32E-24 T 28-03-2018 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 371 1.5E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Gene3D G3DSA:3.40.1190.10 95 299 1.6E-61 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.592 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19650 c9640d4940795a9353f449c0bd2b57a5 438 SUPERFAMILY SSF53244 299 437 2.52E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 SUPERFAMILY SSF51735 141 305 2.5E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.0E-187 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 SUPERFAMILY SSF50129 1 173 1.34E-53 T 28-03-2018 IPR011032 GroES-like CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.89 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.7E-32 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.4E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 Gene3D G3DSA:3.90.180.10 1 152 1.3E-45 T 28-03-2018 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 Gene3D G3DSA:3.40.50.10730 153 303 7.5E-27 T 28-03-2018 CO704_RS23735 b616636e246e178bf9e787e59206c79a 341 SMART SM00829 12 338 1.0E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS11165 bee7d8d40fbeb476e142b6a363e2c883 225 Pfam PF09825 Biotin-protein ligase, N terminal 5 100 1.8E-6 T 28-03-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780 CO704_RS11165 bee7d8d40fbeb476e142b6a363e2c883 225 Gene3D G3DSA:3.40.50.880 1 213 3.7E-24 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS11165 bee7d8d40fbeb476e142b6a363e2c883 225 PIRSF PIRSF016642 1 211 2.3E-41 T 28-03-2018 IPR015834 Uncharacterised conserved protein UCP016642 CO704_RS11165 bee7d8d40fbeb476e142b6a363e2c883 225 SUPERFAMILY SSF52317 12 191 9.89E-20 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS22140 cf2febb6dc7498a7f8f72b8e7c48323b 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 2.3E-132 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS22140 cf2febb6dc7498a7f8f72b8e7c48323b 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.5E-125 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS21855 cc26eff2f29ba37fe4b730fd8438c605 333 Pfam PF06834 TraU protein 40 322 3.5E-67 T 28-03-2018 IPR009649 TraU CO704_RS21855 cc26eff2f29ba37fe4b730fd8438c605 333 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 37 332 8.6E-125 T 28-03-2018 IPR026331 Integrating conjugative element protein PFL_4710 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 SUPERFAMILY SSF52540 331 538 6.17E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 SMART SM00382 337 528 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 Gene3D G3DSA:3.40.50.300 331 540 1.4E-40 T 28-03-2018 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 Pfam PF02881 SRP54-type protein, helical bundle domain 255 320 2.3E-13 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 Gene3D G3DSA:1.20.120.140 231 325 2.0E-23 T 28-03-2018 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 SMART SM00962 338 539 1.9E-124 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 267 538 3.2E-116 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 Pfam PF00448 SRP54-type protein, GTPase domain 338 538 2.0E-78 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 SUPERFAMILY SSF47364 239 318 1.83E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 SMART SM00963 244 324 7.3E-25 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 512 525 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS00495 217483b88bab40aabf18863ad67acb7c 542 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 267 539 65.312 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CO704_RS09075 ffcffc75810aaa1f6d5d302676143ca3 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 18.826 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CO704_RS09075 ffcffc75810aaa1f6d5d302676143ca3 47 Pfam PF13998 MgrB protein 19 47 8.5E-17 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CO704_RS17965 c24267afb9e42eea2f06d7c568d1e0e3 85 PIRSF PIRSF003108 1 85 1.9E-26 T 28-03-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 CO704_RS17965 c24267afb9e42eea2f06d7c568d1e0e3 85 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 83 1.7E-19 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CO704_RS17965 c24267afb9e42eea2f06d7c568d1e0e3 85 Pfam PF04221 RelB antitoxin 4 82 4.2E-22 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 PIRSF PIRSF005902 2 258 6.5E-67 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 Gene3D G3DSA:3.20.20.140 3 258 4.2E-73 T 28-03-2018 CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 SUPERFAMILY SSF51556 5 256 7.47E-75 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS20120 a50a02c233ab7b44d03699186eb1d65a 258 Pfam PF01026 TatD related DNase 7 256 1.9E-65 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 3.0E-74 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 SUPERFAMILY SSF51182 195 479 2.39E-89 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 Gene3D G3DSA:3.90.550.10 6 347 1.1E-96 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 Pfam PF00483 Nucleotidyl transferase 8 295 2.0E-76 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 6 479 4.1E-241 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 SUPERFAMILY SSF53448 6 292 1.1E-73 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07500 dd314350c18c914fcd8ff26713ea95c6 480 Gene3D G3DSA:2.60.120.10 348 457 6.5E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS17295 cfcce1591f98ede5ebe08821c0924b84 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.245 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS17295 cfcce1591f98ede5ebe08821c0924b84 127 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 3.4E-40 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS17295 cfcce1591f98ede5ebe08821c0924b84 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 8.9E-24 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS03980 d7c25cc78244c65738d5d576dc628a32 143 Gene3D G3DSA:1.20.1290.10 3 143 1.4E-33 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS03980 d7c25cc78244c65738d5d576dc628a32 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 95 7.1E-17 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS03980 d7c25cc78244c65738d5d576dc628a32 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.9E-15 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS03980 d7c25cc78244c65738d5d576dc628a32 143 SUPERFAMILY SSF69118 8 142 7.33E-40 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11095 933333ffca2a705cdbc82186b504e470 184 Pfam PF02525 Flavodoxin-like fold 3 174 6.1E-38 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS11095 933333ffca2a705cdbc82186b504e470 184 Gene3D G3DSA:3.40.50.360 1 184 6.6E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS11095 933333ffca2a705cdbc82186b504e470 184 SUPERFAMILY SSF52218 1 181 1.24E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PIRSF PIRSF000723 1 310 6.6E-121 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 308 2.8E-116 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 Gene3D G3DSA:3.40.1160.10 1 310 5.5E-56 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 SUPERFAMILY SSF53633 3 308 2.36E-82 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 Pfam PF00696 Amino acid kinase family 3 283 1.4E-30 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 1.6E-64 T 28-03-2018 CO704_RS11000 8d33b68ea38542f91d25625d444ca3ea 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 1.6E-64 T 28-03-2018 CO704_RS06000 77e00ce656c3300a0f16506c576dc583 412 Gene3D G3DSA:3.40.640.10 46 283 2.1E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS06000 77e00ce656c3300a0f16506c576dc583 412 Pfam PF00155 Aminotransferase class I and II 37 381 9.3E-60 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS06000 77e00ce656c3300a0f16506c576dc583 412 Gene3D G3DSA:3.90.1150.10 284 398 1.1E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS06000 77e00ce656c3300a0f16506c576dc583 412 SUPERFAMILY SSF53383 8 394 1.48E-107 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS15765 e6f73dfe49d08d601ac90f13948c0d63 143 Pfam PF07681 DoxX 20 98 1.4E-19 T 28-03-2018 IPR032808 DoxX family CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.8E-203 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 Gene3D G3DSA:3.40.640.10 60 289 1.9E-76 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.191 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 Pfam PF00202 Aminotransferase class-III 26 400 8.7E-137 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 PIRSF PIRSF000521 28 158 1.2E-8 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 PIRSF PIRSF000521 173 403 6.4E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 Gene3D G3DSA:3.90.1150.10 290 406 7.3E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 SUPERFAMILY SSF53383 10 400 3.81E-124 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS00960 65cd3bcd0c56e7503b2eb0c1df150b4c 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 4.3E-148 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CO704_RS12800 2046a7dcec0709aa98471028dcb94c1c 343 Gene3D G3DSA:3.20.20.210 1 342 2.3E-88 T 28-03-2018 CO704_RS12800 2046a7dcec0709aa98471028dcb94c1c 343 SUPERFAMILY SSF51726 7 342 8.37E-69 T 28-03-2018 CO704_RS12800 2046a7dcec0709aa98471028dcb94c1c 343 PIRSF PIRSF005632 1 343 2.2E-198 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CO704_RS12800 2046a7dcec0709aa98471028dcb94c1c 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.0E-37 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 SUPERFAMILY SSF110997 327 398 5.75E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 Pfam PF03330 Lytic transglycolase 82 169 1.7E-19 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 1 172 20.799 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 84 185 9.5E-28 T 28-03-2018 IPR012997 Rare lipoprotein A CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 SUPERFAMILY SSF50685 79 163 3.84E-7 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 Pfam PF05036 Sporulation related domain 328 399 2.6E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 Gene3D G3DSA:3.30.70.1070 324 401 2.0E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS17250 9beb79e4f6b2b121498bde9237423703 404 Gene3D G3DSA:2.40.40.10 60 172 2.7E-16 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 Gene3D G3DSA:3.40.50.2300 192 350 1.8E-19 T 28-03-2018 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 SUPERFAMILY SSF53822 24 364 4.71E-91 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.1E-65 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 Gene3D G3DSA:3.40.50.2300 9 191 2.2E-39 T 28-03-2018 CO704_RS00545 4dea4299f1d7a4f1fa40e156cdf4ed27 369 Pfam PF13458 Periplasmic binding protein 26 362 1.1E-60 T 28-03-2018 IPR028081 Leucine-binding protein domain CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 SUPERFAMILY SSF88713 1 269 4.11E-47 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Gene3D G3DSA:2.60.40.1180 371 501 4.7E-21 T 28-03-2018 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 3 264 1.7E-31 T 28-03-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Gene3D G3DSA:1.20.1270.50 275 370 5.1E-19 T 28-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Pfam PF09261 Alpha mannosidase middle domain 276 352 3.2E-10 T 28-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 SUPERFAMILY SSF88688 276 373 4.9E-12 T 28-03-2018 IPR028995 Glycoside hydrolase families 57/38, central domain CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 SUPERFAMILY SSF74650 361 817 2.51E-58 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 SMART SM00872 275 353 2.5E-12 T 28-03-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 383 817 7.3E-22 T 28-03-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Gene3D G3DSA:3.20.110.10 1 189 5.9E-40 T 28-03-2018 IPR027291 Glycoside hydrolase 38/57, N-terminal domain CO704_RS08305 612f41545bb9aedbf5ce209e57b34fe2 862 Gene3D G3DSA:3.20.110.10 190 272 9.7E-4 T 28-03-2018 IPR027291 Glycoside hydrolase 38/57, N-terminal domain CO704_RS20870 23f13509312408e1cd346a8c64b57084 229 SUPERFAMILY SSF53639 2 219 8.83E-69 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS20870 23f13509312408e1cd346a8c64b57084 229 Gene3D G3DSA:3.40.225.10 1 227 1.5E-61 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS20870 23f13509312408e1cd346a8c64b57084 229 SMART SM01007 6 194 4.5E-70 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS20870 23f13509312408e1cd346a8c64b57084 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 6 193 1.7E-48 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CO704_RS14710 d87417869b7f0213b77053d61762bc5d 404 Gene3D G3DSA:1.20.1250.20 13 199 3.7E-26 T 28-03-2018 CO704_RS14710 d87417869b7f0213b77053d61762bc5d 404 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.877 T 28-03-2018 IPR022855 Multidrug resistance protein MdtH CO704_RS14710 d87417869b7f0213b77053d61762bc5d 404 SUPERFAMILY SSF103473 14 388 4.19E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS14710 d87417869b7f0213b77053d61762bc5d 404 Gene3D G3DSA:1.20.1250.20 200 396 1.2E-20 T 28-03-2018 CO704_RS14710 d87417869b7f0213b77053d61762bc5d 404 Pfam PF07690 Major Facilitator Superfamily 20 237 8.7E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 1.8E-38 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 SUPERFAMILY SSF53901 1 252 2.88E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 SUPERFAMILY SSF53901 214 402 3.58E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 Gene3D G3DSA:3.40.47.10 261 405 2.7E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 Gene3D G3DSA:3.40.47.10 4 258 4.9E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 3.1E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CO704_RS06320 dcb336ed953b4f5a9e93457df69fc987 405 SMART SM00825 Beta-ketoacyl synthase 4 405 2.6E-13 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 SUPERFAMILY SSF52540 2 231 4.26E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 Pfam PF00005 ABC transporter 17 172 1.1E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 Gene3D G3DSA:3.40.50.300 1 248 1.4E-44 T 28-03-2018 CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 SMART SM00382 26 223 2.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.7E-114 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CO704_RS13650 f8e2e99622ca50a27c792908d5f6b579 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13040 02e780c21927d49e0e6ce863cfcf87d3 326 SUPERFAMILY SSF53448 4 229 1.5E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS13040 02e780c21927d49e0e6ce863cfcf87d3 326 Pfam PF00535 Glycosyl transferase family 2 11 171 2.0E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS13040 02e780c21927d49e0e6ce863cfcf87d3 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 325 61.594 T 28-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 CO704_RS13040 02e780c21927d49e0e6ce863cfcf87d3 326 Gene3D G3DSA:3.90.550.10 2 229 5.9E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS13200 64a646428f8d11d71973a37c69bd52b6 462 Gene3D G3DSA:3.40.50.1220 289 462 3.9E-91 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS13200 64a646428f8d11d71973a37c69bd52b6 462 SUPERFAMILY SSF52467 289 462 4.91E-78 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS13200 64a646428f8d11d71973a37c69bd52b6 462 PIRSF PIRSF000204 1 462 1.9E-238 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CO704_RS13200 64a646428f8d11d71973a37c69bd52b6 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 5.0E-204 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 Pfam PF00691 OmpA family 72 167 3.8E-21 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 1.7E-46 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 SUPERFAMILY SSF103088 60 172 3.66E-34 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 PRINTS PR01021 OMPA domain signature 73 95 3.4E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 PRINTS PR01021 OMPA domain signature 118 134 3.4E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 PRINTS PR01021 OMPA domain signature 103 118 3.4E-16 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS16610 c24fa64188f813a19bdde3043e609964 173 Gene3D G3DSA:3.30.1330.60 44 173 4.8E-34 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS09375 28a941f42db170094baef170fa21c778 336 SUPERFAMILY SSF55347 152 315 2.08E-66 T 28-03-2018 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.4E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.4E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 SMART SM00846 2 152 1.5E-95 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 9.9E-62 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 101 1.7E-38 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 Gene3D G3DSA:3.30.360.10 162 316 5.6E-63 T 28-03-2018 CO704_RS09375 28a941f42db170094baef170fa21c778 336 PIRSF PIRSF000149 1 335 9.8E-132 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 SUPERFAMILY SSF51735 2 168 7.37E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS09375 28a941f42db170094baef170fa21c778 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 1.8E-127 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS09375 28a941f42db170094baef170fa21c778 336 Gene3D G3DSA:3.40.50.720 1 161 4.2E-73 T 28-03-2018 CO704_RS09335 d203c85a4592ec52ee85bf2962b25f52 460 SUPERFAMILY SSF56112 20 297 1.42E-33 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS09335 d203c85a4592ec52ee85bf2962b25f52 460 SMART SM00220 23 294 2.9E-7 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CO704_RS09335 d203c85a4592ec52ee85bf2962b25f52 460 Gene3D G3DSA:1.10.510.10 125 363 5.7E-20 T 28-03-2018 CO704_RS09335 d203c85a4592ec52ee85bf2962b25f52 460 Pfam PF00069 Protein kinase domain 84 285 6.8E-12 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CO704_RS09335 d203c85a4592ec52ee85bf2962b25f52 460 Gene3D G3DSA:3.30.200.20 18 124 4.7E-11 T 28-03-2018 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 5.0E-77 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PIRSF PIRSF001438 1 310 1.2E-121 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.1E-114 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Gene3D G3DSA:3.30.160.40 221 304 1.6E-25 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.631 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 SUPERFAMILY SSF54782 220 308 6.28E-28 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Gene3D G3DSA:3.40.190.10 107 199 2.0E-36 T 28-03-2018 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Gene3D G3DSA:3.40.190.10 2 106 7.7E-44 T 28-03-2018 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 SUPERFAMILY SSF53850 5 219 5.93E-85 T 28-03-2018 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.8E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.8E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.8E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.8E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.8E-48 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23250 799dd964cc7f16ea7e2f3ec5d1a315f4 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 3.7E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 Pfam PF02687 FtsX-like permease family 551 639 5.5E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 Pfam PF12704 MacB-like periplasmic core domain 271 488 1.1E-33 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 Pfam PF00005 ABC transporter 24 172 8.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 SUPERFAMILY SSF52540 4 224 1.09E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 SMART SM00382 33 220 2.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 Gene3D G3DSA:1.20.1250.20 246 638 1.3E-6 T 28-03-2018 CO704_RS11385 577454e9ed19d7413209a14df51ca92c 646 Gene3D G3DSA:3.40.50.300 1 233 2.3E-61 T 28-03-2018 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 112 133 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 142 164 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 311 331 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 85 109 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 23 39 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 PRINTS PR01035 Tetracycline resistance protein signature 346 369 9.1E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 Gene3D G3DSA:1.20.1250.20 8 202 4.0E-37 T 28-03-2018 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 Gene3D G3DSA:1.20.1250.20 205 408 4.5E-30 T 28-03-2018 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 SUPERFAMILY SSF103473 1 400 4.19E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 Pfam PF07690 Major Facilitator Superfamily 17 261 1.6E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS14765 a7435741dfaf839b41a2ae2efae5a821 408 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 47.953 T 28-03-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 CO704_RS06820 8cc8a48754cccdb9b0efd91caad893b5 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 9.0E-46 T 28-03-2018 IPR020489 Uncharacterised protein family YejG CO704_RS06820 8cc8a48754cccdb9b0efd91caad893b5 114 Pfam PF13989 YejG-like protein 4 108 1.8E-49 T 28-03-2018 IPR020489 Uncharacterised protein family YejG CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 SUPERFAMILY SSF55604 6 80 6.67E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.7E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 5.5E-94 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 1.0E-49 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 9.1E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 448 4.4E-196 T 28-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 Gene3D G3DSA:3.30.1360.60 4 80 4.2E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS11235 5e1cd5476f3641c0eb2b7fb15e980940 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 SMART SM01134 75 236 2.1E-65 T 28-03-2018 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 SUPERFAMILY SSF46785 8 70 4.94E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 3.9E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 3.9E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 Pfam PF00455 DeoR C terminal sensor domain 78 233 6.2E-49 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 7.8E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 Gene3D G3DSA:1.10.10.10 1 63 5.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 SMART SM00420 9 61 5.9E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 SUPERFAMILY SSF100950 77 234 9.31E-32 T 28-03-2018 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS10905 7d7134f33ef283433084fbece7e93007 255 Gene3D G3DSA:3.40.50.1360 67 236 5.0E-44 T 28-03-2018 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 SUPERFAMILY SSF55620 3 119 2.0E-40 T 28-03-2018 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 120 7.9E-38 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 PIRSF PIRSF006113 1 120 4.8E-55 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 4.8E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 5.7E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CO704_RS03640 d16c158488eaf4a1e3e63e1103406caa 120 Gene3D G3DSA:3.30.479.10 1 120 6.6E-39 T 28-03-2018 CO704_RS18265 a82fe91d7ab3b75e70eab6a3836c10cf 198 Pfam PF01965 DJ-1/PfpI family 4 170 2.6E-46 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS18265 a82fe91d7ab3b75e70eab6a3836c10cf 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 4.4E-60 T 28-03-2018 IPR006287 Protein DJ-1 CO704_RS18265 a82fe91d7ab3b75e70eab6a3836c10cf 198 SUPERFAMILY SSF52317 5 187 1.06E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS18265 a82fe91d7ab3b75e70eab6a3836c10cf 198 Gene3D G3DSA:3.40.50.880 1 191 2.2E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 SUPERFAMILY SSF46785 5 89 4.35E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 Gene3D G3DSA:1.10.10.10 4 93 2.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 4.6E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 Gene3D G3DSA:3.40.190.10 181 266 2.9E-7 T 28-03-2018 CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 Gene3D G3DSA:3.40.190.10 94 180 5.6E-14 T 28-03-2018 CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 Pfam PF03466 LysR substrate binding domain 89 287 1.1E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07710 c2879616bf45b0a38079ed95d7d21cb7 304 SUPERFAMILY SSF53850 89 291 2.5E-25 T 28-03-2018 CO704_RS25220 eaf66a57bc30665b7809ef9fd5065dfb 111 SUPERFAMILY SSF103481 7 107 2.22E-17 T 28-03-2018 CO704_RS25220 eaf66a57bc30665b7809ef9fd5065dfb 111 Pfam PF00893 Small Multidrug Resistance protein 5 95 2.9E-24 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS02830 5cd4aeaefb1d1020859f338110090bce 171 Hamap MF_00746 Protein SprT [sprT]. 12 165 39.921 T 28-03-2018 IPR023483 Uncharacterised protein family SprT CO704_RS02830 5cd4aeaefb1d1020859f338110090bce 171 SMART SM00731 16 165 1.1E-57 T 28-03-2018 IPR006640 SprT-like CO704_RS02830 5cd4aeaefb1d1020859f338110090bce 171 Pfam PF17283 SprT-like zinc ribbon domain 126 163 2.4E-9 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain CO704_RS02830 5cd4aeaefb1d1020859f338110090bce 171 Gene3D G3DSA:3.30.40.10 10 165 0.0011 T 28-03-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type CO704_RS02830 5cd4aeaefb1d1020859f338110090bce 171 Pfam PF10263 SprT-like family 19 119 1.1E-16 T 28-03-2018 IPR006640 SprT-like CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 SUPERFAMILY SSF53623 105 322 4.06E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Pfam PF08245 Mur ligase middle domain 124 304 2.3E-27 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 3.7E-183 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Gene3D G3DSA:3.90.190.20 325 480 3.5E-35 T 28-03-2018 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 SUPERFAMILY SSF51984 20 106 4.05E-29 T 28-03-2018 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.4E-29 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 SUPERFAMILY SSF53244 323 476 7.14E-45 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Gene3D G3DSA:3.40.50.720 1 107 2.0E-19 T 28-03-2018 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 3.8E-21 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Gene3D G3DSA:3.40.1190.10 108 324 1.3E-54 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS19635 c9c24a0b7b2e250153ffd5de7ecf7c83 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.419 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Gene3D G3DSA:3.40.50.10860 61 190 7.2E-54 T 28-03-2018 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 7.0E-86 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.8E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.8E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.8E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.8E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Gene3D G3DSA:3.40.50.720 209 373 7.3E-45 T 28-03-2018 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 SUPERFAMILY SSF51735 202 446 1.73E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 PIRSF PIRSF000185 22 447 1.8E-114 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Gene3D G3DSA:1.10.285.10 6 60 1.4E-7 T 28-03-2018 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Gene3D G3DSA:1.10.285.10 374 447 1.6E-25 T 28-03-2018 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 SUPERFAMILY SSF53223 7 196 1.82E-73 T 28-03-2018 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 SMART SM00839 204 445 4.8E-91 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS18030 1e74cb34650bb27b77e5bd211d44d285 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 1.5E-49 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 SUPERFAMILY SSF52540 1268 1433 1.69E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 SUPERFAMILY SSF52540 21 55 1.69E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:3.40.1140.10 1 227 1.7E-11 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:1.20.5.170 448 601 0.37 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:1.20.5.170 623 822 0.14 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:1.20.5.730 297 427 0.019 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.108 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:1.20.5.50 831 952 0.11 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:1.20.5.50 963 1105 3.5E-6 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Pfam PF04310 MukB N-terminal 2 227 3.2E-123 T 28-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Gene3D G3DSA:3.40.50.300 1138 1437 5.0E-5 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 6.3E-15 T 28-03-2018 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 PIRSF PIRSF005246 1 1484 0.0 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 SUPERFAMILY SSF52540 22 224 1.23E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15520 91d9f39e166b21e64c26e184bf885dcc 1485 Pfam PF16330 MukB hinge domain 645 810 6.5E-73 T 28-03-2018 IPR032520 MukB, hinge domain CO704_RS12030 b4d4d31af0b92d822627676fe961f05e 682 Gene3D G3DSA:1.10.1370.10 458 682 1.7E-55 T 28-03-2018 CO704_RS12030 b4d4d31af0b92d822627676fe961f05e 682 Gene3D G3DSA:1.10.1370.10 146 378 1.5E-37 T 28-03-2018 CO704_RS12030 b4d4d31af0b92d822627676fe961f05e 682 Gene3D G3DSA:1.20.1050.40 10 144 2.2E-33 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CO704_RS12030 b4d4d31af0b92d822627676fe961f05e 682 Pfam PF01432 Peptidase family M3 230 678 2.4E-135 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CO704_RS12030 b4d4d31af0b92d822627676fe961f05e 682 SUPERFAMILY SSF55486 10 678 1.83E-169 T 28-03-2018 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.702 T 28-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Gene3D G3DSA:3.30.870.10 316 476 5.8E-28 T 28-03-2018 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Gene3D G3DSA:3.30.870.10 98 288 2.4E-26 T 28-03-2018 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 SUPERFAMILY SSF56024 274 473 6.73E-48 T 28-03-2018 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 SMART SM00155 399 426 4.2E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 SMART SM00155 219 246 1.4E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 4.4E-6 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Pfam PF13091 PLD-like domain 332 448 2.4E-23 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 Pfam PF13091 PLD-like domain 134 247 3.4E-11 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 SUPERFAMILY SSF56024 66 315 1.88E-45 T 28-03-2018 CO704_RS09895 9f01f12e38879ce8997623f4d4fe3f84 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 4.1E-218 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CO704_RS15020 bafc7e082be68705b0feec041a4c906b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.0E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CO704_RS15020 bafc7e082be68705b0feec041a4c906b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.2E-9 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CO704_RS03370 010f633caeae5100cc40e2b500e85303 186 PIRSF PIRSF004525 1 186 3.7E-54 T 28-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CO704_RS03370 010f633caeae5100cc40e2b500e85303 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.5E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS03370 010f633caeae5100cc40e2b500e85303 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 4.9E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS03370 010f633caeae5100cc40e2b500e85303 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS06095 6945e75fd7986b8d0d592541f2b39615 81 ProDom PD059807 YMJA ECS1872 1 81 2.0E-31 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA CO704_RS06095 6945e75fd7986b8d0d592541f2b39615 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 2.4E-45 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA CO704_RS23955 56b940afbc032f815a68705e66154532 170 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 16.847 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 CO704_RS23955 56b940afbc032f815a68705e66154532 170 Pfam PF04220 Der GTPase activator (YihI) 14 166 2.6E-56 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 CO704_RS23390 25e3d4517b90bb3899138563c506a60f 146 SUPERFAMILY SSF46785 2 132 3.22E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23390 25e3d4517b90bb3899138563c506a60f 146 Gene3D G3DSA:1.10.10.10 1 145 5.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23390 25e3d4517b90bb3899138563c506a60f 146 Pfam PF02082 Transcriptional regulator 1 81 1.3E-19 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 SUPERFAMILY SSF52964 28 161 1.83E-41 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Gene3D G3DSA:3.40.50.10070 22 156 2.3E-39 T 28-03-2018 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 4.1E-157 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 5.6E-10 T 28-03-2018 IPR011659 WD40-like Beta Propeller CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Pfam PF07676 WD40-like Beta Propeller Repeat 372 396 0.024 T 28-03-2018 IPR011659 WD40-like Beta Propeller CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.3E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 7.9E-11 T 28-03-2018 IPR011659 WD40-like Beta Propeller CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Gene3D G3DSA:2.140.10.30 157 254 5.5E-10 T 28-03-2018 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.084 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Gene3D G3DSA:2.130.10.150 255 429 5.7E-31 T 28-03-2018 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 SUPERFAMILY SSF69304 155 428 2.09E-53 T 28-03-2018 CO704_RS16615 6cd07d5b07a2d6a58d25a0949b91ca42 430 Pfam PF04052 TolB amino-terminal domain 23 122 4.9E-33 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CO704_RS21570 b7b70d724c9e262a866af77152fe472d 523 Pfam PF03050 Transposase IS66 family 187 472 3.9E-98 T 28-03-2018 IPR004291 Transposase, IS66 CO704_RS21570 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 1.4E-14 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CO704_RS21570 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13817 IS66 C-terminal element 479 516 1.1E-15 T 28-03-2018 CO704_RS21570 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 121 1.3E-11 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain CO704_RS21710 b7b70d724c9e262a866af77152fe472d 523 Pfam PF03050 Transposase IS66 family 187 472 3.9E-98 T 28-03-2018 IPR004291 Transposase, IS66 CO704_RS21710 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 1.4E-14 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CO704_RS21710 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13817 IS66 C-terminal element 479 516 1.1E-15 T 28-03-2018 CO704_RS21710 b7b70d724c9e262a866af77152fe472d 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 121 1.3E-11 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SMART SM00316 620 690 3.6E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF00575 S1 RNA binding domain 619 690 2.7E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF55666 145 235 3.14E-30 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF00013 KH domain 556 614 8.7E-9 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.5E-17 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.1E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF50249 608 693 1.46E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.408 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SMART SM00322 552 617 2.7E-12 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF54791 554 622 3.41E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF55666 450 548 3.65E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 6.1E-15 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 8.6E-5 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF46915 238 320 1.31E-18 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Gene3D G3DSA:3.30.1370.10 554 616 2.3E-13 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF54211 293 488 4.1E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Gene3D G3DSA:2.40.50.140 617 698 2.3E-26 T 28-03-2018 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 SUPERFAMILY SSF54211 4 144 1.01E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Gene3D G3DSA:3.30.230.70 317 544 1.2E-57 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 5.2E-26 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 PIRSF PIRSF005499 2 707 1.6E-300 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Gene3D G3DSA:1.10.10.400 250 316 1.3E-20 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CO704_RS01825 2324bbb7d5316ae11c68f5812aa98c44 709 Gene3D G3DSA:3.30.230.70 13 249 2.2E-53 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 6.4E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 3.1E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 SUPERFAMILY SSF161098 181 374 1.22E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 Gene3D G3DSA:1.10.3720.10 190 393 3.9E-36 T 28-03-2018 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 SUPERFAMILY SSF161098 83 164 7.36E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01350 a7a6e8b3ce97598b571649fb301699e1 393 Gene3D G3DSA:1.10.3720.10 12 189 3.1E-19 T 28-03-2018 CO704_RS13370 46067b1436bd5c37747dcbe727270934 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.443 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CO704_RS13370 46067b1436bd5c37747dcbe727270934 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 7.9E-143 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CO704_RS13370 46067b1436bd5c37747dcbe727270934 350 Pfam PF03116 NQR2, RnfD, RnfE family 5 348 6.6E-107 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CO704_RS01465 34abcdd6890c3642d76e158efee189cc 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.6E-64 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CO704_RS01465 34abcdd6890c3642d76e158efee189cc 481 PIRSF PIRSF004919 14 481 1.3E-147 T 28-03-2018 IPR025502 TldD CO704_RS01465 34abcdd6890c3642d76e158efee189cc 481 Gene3D G3DSA:3.30.2290.10 18 240 8.2E-52 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CO704_RS01465 34abcdd6890c3642d76e158efee189cc 481 SUPERFAMILY SSF111283 23 480 6.15E-126 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CO704_RS11690 10f0ca6dd851bf5bbc20d27b0a086825 337 PIRSF PIRSF000267 2 337 3.4E-88 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS11690 10f0ca6dd851bf5bbc20d27b0a086825 337 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 7.6E-42 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS11690 10f0ca6dd851bf5bbc20d27b0a086825 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 326 1.3E-98 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS19805 3c51d98d83ebd08c2edd6c33ccbe87ed 125 Gene3D G3DSA:2.60.40.1470 4 125 3.2E-44 T 28-03-2018 IPR007474 ApaG domain CO704_RS19805 3c51d98d83ebd08c2edd6c33ccbe87ed 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.333 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG CO704_RS19805 3c51d98d83ebd08c2edd6c33ccbe87ed 125 SUPERFAMILY SSF110069 5 125 3.4E-49 T 28-03-2018 IPR007474 ApaG domain CO704_RS19805 3c51d98d83ebd08c2edd6c33ccbe87ed 125 Pfam PF04379 ApaG domain 18 102 8.5E-34 T 28-03-2018 IPR007474 ApaG domain CO704_RS22255 5f63b10d41b69cac474ee53dc0687901 282 Gene3D G3DSA:1.10.3470.10 3 278 3.8E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS22255 5f63b10d41b69cac474ee53dc0687901 282 Pfam PF00950 ABC 3 transport family 12 267 1.3E-78 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CO704_RS22255 5f63b10d41b69cac474ee53dc0687901 282 SUPERFAMILY SSF81345 4 267 6.28E-40 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS16570 f7d0a8f95289f24a4a276545c2aced87 108 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 17 108 1.0E-16 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS CO704_RS16570 f7d0a8f95289f24a4a276545c2aced87 108 Pfam PF13985 YbgS-like protein 1 108 1.6E-38 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 709 964 3.3E-58 T 28-03-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 Pfam PF04851 Type III restriction enzyme, res subunit 244 414 1.0E-35 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 Gene3D G3DSA:3.40.50.300 221 431 2.6E-25 T 28-03-2018 CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 705 6.6E-149 T 28-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 SUPERFAMILY SSF52540 591 678 7.28E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 SUPERFAMILY SSF52540 271 311 7.28E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 193 3.3E-35 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 SUPERFAMILY SSF52540 245 421 2.26E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02130 bbc450adb7831391be4c3266189b6bed 971 SMART SM00487 242 443 7.8E-18 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Pfam PF00158 Sigma-54 interaction domain 381 547 5.5E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SUPERFAMILY SSF55781 12 169 6.98E-13 T 28-03-2018 IPR029016 GAF domain-like CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Pfam PF13185 GAF domain 201 345 7.0E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Gene3D G3DSA:1.10.8.60 554 638 2.8E-21 T 28-03-2018 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Gene3D G3DSA:1.10.10.60 639 691 1.1E-8 T 28-03-2018 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SMART SM00065 26 174 2.8E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SMART SM00065 202 354 2.0E-21 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Gene3D G3DSA:3.40.50.300 376 553 1.7E-28 T 28-03-2018 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SMART SM00382 401 545 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Gene3D G3DSA:3.30.450.40 177 360 4.5E-23 T 28-03-2018 IPR029016 GAF domain-like CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 Gene3D G3DSA:3.30.450.40 10 176 2.5E-16 T 28-03-2018 IPR029016 GAF domain-like CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SUPERFAMILY SSF46689 594 690 2.06E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SUPERFAMILY SSF55781 184 358 4.8E-19 T 28-03-2018 IPR029016 GAF domain-like CO704_RS24210 c4315a20b66aeaafc90480f83e8e386c 694 SUPERFAMILY SSF52540 380 617 5.92E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 Gene3D G3DSA:1.10.1740.10 9 80 3.7E-10 T 28-03-2018 CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 SUPERFAMILY SSF88946 18 92 9.42E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 Gene3D G3DSA:1.10.10.10 104 182 5.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 Pfam PF04542 Sigma-70 region 2 19 77 8.3E-8 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 Pfam PF08281 Sigma-70, region 4 120 168 1.7E-6 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 175 1.7E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS11085 38c78f16fe54f15add80b6e04a2c2e93 186 SUPERFAMILY SSF88659 94 178 9.16E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 Pfam PF00854 POT family 89 463 4.2E-67 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 SUPERFAMILY SSF103473 333 499 2.75E-11 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 SUPERFAMILY SSF103473 7 309 1.1E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 Gene3D G3DSA:1.20.1250.20 3 213 4.5E-27 T 28-03-2018 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 Gene3D G3DSA:1.20.1250.20 285 506 1.2E-15 T 28-03-2018 CO704_RS03155 9f1d1369ed817394f15b0ec6ce793907 508 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 499 5.8E-109 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Gene3D G3DSA:3.30.470.20 192 300 2.8E-16 T 28-03-2018 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 3.5E-140 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Gene3D G3DSA:3.30.1490.20 138 191 9.4E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 SUPERFAMILY SSF56059 123 312 1.37E-59 T 28-03-2018 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 181.717 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.5E-79 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.7E-47 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 Gene3D G3DSA:3.40.50.20 2 129 4.2E-52 T 28-03-2018 CO704_RS02815 1d94b11e3403fe23f1ec25921527beb8 315 SUPERFAMILY SSF52440 2 122 8.06E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 Gene3D G3DSA:3.30.420.40 1 263 3.4E-67 T 28-03-2018 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 538 8.6E-213 T 28-03-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 PIRSF PIRSF000538 2 543 6.8E-76 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 3.0E-32 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 SUPERFAMILY SSF53067 279 531 3.21E-55 T 28-03-2018 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 SUPERFAMILY SSF53067 4 263 1.48E-60 T 28-03-2018 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 1.1E-41 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS04825 a7ae235605b512685fc0d2b4783c675e 545 Gene3D G3DSA:3.30.420.40 276 545 1.4E-65 T 28-03-2018 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 Gene3D G3DSA:3.40.50.300 8 163 1.5E-23 T 28-03-2018 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 3.8E-57 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 Gene3D G3DSA:1.10.8.10 169 206 1.7E-13 T 28-03-2018 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 321 3.8E-38 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 Gene3D G3DSA:1.20.272.10 208 330 6.7E-22 T 28-03-2018 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 SUPERFAMILY SSF48019 208 326 1.26E-32 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 SUPERFAMILY SSF52540 3 206 9.75E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14520 68dd95f3c7ec3e19f3761e6db81741d6 335 Pfam PF13177 DNA polymerase III, delta subunit 10 166 1.0E-38 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Pfam PF01842 ACT domain 710 760 4.7E-7 T 28-03-2018 IPR002912 ACT domain CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Pfam PF01842 ACT domain 818 875 3.6E-7 T 28-03-2018 IPR002912 ACT domain CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Gene3D G3DSA:1.10.3090.10 362 671 2.1E-37 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Gene3D G3DSA:3.30.70.260 700 797 9.8E-9 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SUPERFAMILY SSF81301 20 190 5.82E-21 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 885 2.3E-300 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SMART SM00471 465 612 1.6E-12 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Gene3D G3DSA:3.30.460.10 54 187 1.3E-22 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SUPERFAMILY SSF55021 813 873 1.45E-9 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 347.183 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SUPERFAMILY SSF109604 458 633 3.69E-14 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SUPERFAMILY SSF81593 213 328 1.02E-8 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Pfam PF08335 GlnD PII-uridylyltransferase 194 332 3.9E-35 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Pfam PF01909 Nucleotidyltransferase domain 87 137 1.5E-4 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Gene3D G3DSA:3.30.70.260 804 881 3.9E-11 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 PIRSF PIRSF006288 23 890 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Gene3D G3DSA:1.20.120.330 191 335 9.2E-24 T 28-03-2018 CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 Pfam PF01966 HD domain 469 602 9.7E-17 T 28-03-2018 IPR006674 HD domain CO704_RS19320 a830125552b91c11650b2c4b2aa80000 890 SUPERFAMILY SSF55021 706 760 4.58E-9 T 28-03-2018 CO704_RS20445 0719ea51adfd63400c4fa4feae849912 194 Gene3D G3DSA:3.40.50.1240 18 181 2.4E-10 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS20445 0719ea51adfd63400c4fa4feae849912 194 SUPERFAMILY SSF53254 25 70 3.62E-5 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 SUPERFAMILY SSF69786 4 95 9.68E-32 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 3.4E-25 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 Gene3D G3DSA:3.30.1200.10 1 97 2.2E-31 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 SMART SM01152 7 83 1.5E-37 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 5 91 7.3E-30 T 28-03-2018 IPR005228 Conserved hypothetical protein CHP00251 CO704_RS02775 916e9b2e4793aa0b2285b91f47a915c0 99 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 20.008 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 2.5E-134 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 PIRSF PIRSF000390 1 379 1.0E-114 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 Gene3D G3DSA:3.40.640.10 3 245 7.4E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 SUPERFAMILY SSF53383 4 376 2.18E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 69.724 T 28-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 CO704_RS13045 7a0641a30e46bf48bc0163dd9db9b9b4 379 Gene3D G3DSA:3.90.1150.10 246 378 4.3E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS05135 c0acd4156d2375b9e6c73a92e0010aa3 139 SUPERFAMILY SSF54593 7 133 5.77E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS05135 c0acd4156d2375b9e6c73a92e0010aa3 139 Gene3D G3DSA:3.10.180.10 4 135 8.7E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS05135 c0acd4156d2375b9e6c73a92e0010aa3 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 128 1.6E-12 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS25090 de7f57c6673b47c2a504c81bcc4da6f0 250 Pfam PF00881 Nitroreductase family 12 166 6.9E-21 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CO704_RS25090 de7f57c6673b47c2a504c81bcc4da6f0 250 PIRSF PIRSF005426 3 250 2.8E-64 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CO704_RS25090 de7f57c6673b47c2a504c81bcc4da6f0 250 SUPERFAMILY SSF55469 5 247 2.49E-49 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS25090 de7f57c6673b47c2a504c81bcc4da6f0 250 Gene3D G3DSA:3.40.109.10 4 250 1.5E-41 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS20750 9f62c784acb7f1ba32227af6c3f48fab 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 3.6E-69 T 28-03-2018 IPR007452 Translocation and assembly module TamB CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 SUPERFAMILY SSF48208 3 350 5.67E-95 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 Gene3D G3DSA:1.50.10.10 22 360 3.6E-92 T 28-03-2018 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 3.9E-15 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 179 196 3.9E-15 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 3.9E-15 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 3.9E-15 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 331 345 3.9E-15 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS24585 125fa5a5bbca68b1c652f2c47e81a8b1 368 Pfam PF01270 Glycosyl hydrolases family 8 12 345 1.0E-97 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CO704_RS18645 c30d225d2716b123fd7e3af80943d7db 322 Gene3D G3DSA:3.10.520.10 13 308 5.0E-53 T 28-03-2018 CO704_RS18645 c30d225d2716b123fd7e3af80943d7db 322 Pfam PF02424 ApbE family 15 290 3.2E-77 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CO704_RS18645 c30d225d2716b123fd7e3af80943d7db 322 PIRSF PIRSF006268 2 312 2.1E-89 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CO704_RS18645 c30d225d2716b123fd7e3af80943d7db 322 SUPERFAMILY SSF143631 10 302 2.35E-86 T 28-03-2018 IPR003374 ApbE-like domain CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.3E-41 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.8E-72 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 Gene3D G3DSA:3.30.360.10 160 314 3.6E-82 T 28-03-2018 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 Gene3D G3DSA:3.40.50.720 1 159 1.5E-78 T 28-03-2018 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 SUPERFAMILY SSF51735 3 166 2.79E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 SUPERFAMILY SSF55347 149 312 3.74E-82 T 28-03-2018 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 SMART SM00846 3 150 6.8E-95 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 8.2E-135 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS14055 d18d041e28d79881cb68237abf037e0a 331 PIRSF PIRSF000149 1 331 1.5E-135 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 SMART SM00304 210 262 5.2E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 Gene3D G3DSA:1.20.120.30 19 184 2.7E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 Pfam PF02203 Tar ligand binding domain homologue 8 168 4.0E-16 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 SUPERFAMILY SSF47170 50 140 4.84E-9 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 478 5.6E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 SMART SM00283 263 510 6.9E-87 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 SUPERFAMILY SSF58104 232 511 2.35E-72 T 28-03-2018 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.1E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 1.1E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 1.1E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 1.1E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10610 be032ddab6ae1a71c182dac766c8462d 512 Gene3D G3DSA:1.10.287.950 309 512 1.0E-47 T 28-03-2018 CO704_RS18300 e6e528ec7e981b5dcc733001b692cde3 139 Pfam PF01029 NusB family 7 131 2.3E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS18300 e6e528ec7e981b5dcc733001b692cde3 139 SUPERFAMILY SSF48013 3 135 2.35E-42 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS18300 e6e528ec7e981b5dcc733001b692cde3 139 Gene3D G3DSA:1.10.940.10 1 138 8.1E-43 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CO704_RS18300 e6e528ec7e981b5dcc733001b692cde3 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.9E-45 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CO704_RS18300 e6e528ec7e981b5dcc733001b692cde3 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.696 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CO704_RS22130 d285c2ab9cf1e482d3256f9fde5c0c7c 540 Gene3D G3DSA:3.30.1330.60 322 540 2.1E-33 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS22130 d285c2ab9cf1e482d3256f9fde5c0c7c 540 PRINTS PR01021 OMPA domain signature 456 472 2.5E-5 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS22130 d285c2ab9cf1e482d3256f9fde5c0c7c 540 PRINTS PR01021 OMPA domain signature 441 456 2.5E-5 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS22130 d285c2ab9cf1e482d3256f9fde5c0c7c 540 SUPERFAMILY SSF103088 385 511 2.62E-32 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS22130 d285c2ab9cf1e482d3256f9fde5c0c7c 540 Pfam PF00691 OmpA family 410 506 9.1E-17 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 Gene3D G3DSA:2.30.40.10 1 57 8.0E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 SUPERFAMILY SSF51556 51 316 1.65E-68 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 Gene3D G3DSA:3.20.20.140 58 315 4.5E-43 T 28-03-2018 CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 PIRSF PIRSF039004 1 367 6.6E-134 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 2.1E-169 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 Pfam PF01979 Amidohydrolase family 251 343 1.2E-5 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS21195 24175044d383b08bbf24e5b88b4721eb 367 SUPERFAMILY SSF51338 1 59 5.08E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS09355 9b9f6ae241df16a5340af48b4ffc890f 473 Gene3D G3DSA:1.20.1250.20 10 207 1.5E-27 T 28-03-2018 CO704_RS09355 9b9f6ae241df16a5340af48b4ffc890f 473 Gene3D G3DSA:1.20.1250.20 263 466 2.4E-13 T 28-03-2018 CO704_RS09355 9b9f6ae241df16a5340af48b4ffc890f 473 SUPERFAMILY SSF103473 254 458 7.85E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09355 9b9f6ae241df16a5340af48b4ffc890f 473 SUPERFAMILY SSF103473 11 205 7.85E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09355 9b9f6ae241df16a5340af48b4ffc890f 473 Pfam PF07690 Major Facilitator Superfamily 18 419 9.4E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 163 8.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 9.9E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 9.9E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 9.9E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 9.9E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 4.7E-25 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 51 181 1.8E-17 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 Gene3D G3DSA:3.40.50.1000 77 205 2.1E-28 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 Gene3D G3DSA:3.40.50.1000 1 27 0.089 T 28-03-2018 IPR023214 HAD-like domain CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 Gene3D G3DSA:1.10.150.240 28 76 1.8E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS06515 4a35b5c90f2d285b900b093ef5c60fc3 219 SUPERFAMILY SSF56784 3 204 5.74E-48 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 SUPERFAMILY SSF52540 11 155 4.18E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 Gene3D G3DSA:1.10.287.890 205 287 1.9E-24 T 28-03-2018 CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 Pfam PF01715 IPP transferase 44 288 2.5E-86 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 Gene3D G3DSA:3.40.50.300 6 201 1.4E-62 T 28-03-2018 CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 298 3.2E-122 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CO704_RS20975 ac1b260f7d91cfc67f11527cd645f4ff 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 10 307 29.836 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 246 6.5E-34 T 28-03-2018 CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 Gene3D G3DSA:3.40.50.720 20 252 2.4E-45 T 28-03-2018 CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25720 066efae42dcd42447d7790b1c59db3e5 254 SUPERFAMILY SSF51735 21 247 2.62E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12935 aaaeb21a416ad37167008973bce46c67 142 Gene3D G3DSA:3.10.450.50 11 133 9.2E-6 T 28-03-2018 CO704_RS12935 aaaeb21a416ad37167008973bce46c67 142 SUPERFAMILY SSF54427 19 106 8.77E-7 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 Pfam PF03472 Autoinducer binding domain 24 159 8.7E-31 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 SUPERFAMILY SSF75516 8 170 5.62E-35 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 5.2E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 SUPERFAMILY SSF46894 171 240 2.82E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 Gene3D G3DSA:1.10.10.10 168 240 9.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 Gene3D G3DSA:3.30.450.80 1 167 1.6E-40 T 28-03-2018 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 SMART SM00421 177 234 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08555 c349c3c57165711ad12afa4e10fcac21 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS21830 77483bd05075ef4822b59889eed414bc 345 SUPERFAMILY SSF52540 85 322 1.51E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21830 77483bd05075ef4822b59889eed414bc 345 SMART SM00382 123 255 2.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS21830 77483bd05075ef4822b59889eed414bc 345 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 127 251 4.1E-29 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS21830 77483bd05075ef4822b59889eed414bc 345 Gene3D G3DSA:3.40.50.300 64 266 4.0E-37 T 28-03-2018 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 Pfam PF01106 NifU-like domain 111 177 1.3E-19 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 4.0E-27 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 Gene3D G3DSA:3.30.300.130 103 187 3.0E-25 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 Gene3D G3DSA:2.60.300.12 1 102 8.4E-16 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 SUPERFAMILY SSF89360 1 97 1.12E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 5.8E-12 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 6.4E-100 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.725 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CO704_RS00710 6734a9214107287e7734a0f5996978c6 191 SUPERFAMILY SSF117916 95 184 2.18E-24 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CO704_RS16745 47fe64e7c0682f257514fc212a47b1cb 561 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 4.7E-243 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CO704_RS16745 47fe64e7c0682f257514fc212a47b1cb 561 PIRSF PIRSF001294 1 560 6.1E-239 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CO704_RS16745 47fe64e7c0682f257514fc212a47b1cb 561 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 1.1E-272 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CO704_RS16745 47fe64e7c0682f257514fc212a47b1cb 561 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.496 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CO704_RS13060 5cbd0ad66b19a02c698f30a316726d2d 402 TIGRFAM TIGR00843 benE: benzoate transporter 7 394 1.3E-159 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CO704_RS13060 5cbd0ad66b19a02c698f30a316726d2d 402 Pfam PF03594 Benzoate membrane transport protein 23 393 2.3E-141 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CO704_RS05300 2f93dbd75cb96ad209d366ffb43c9cf6 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 219 8.7E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05300 2f93dbd75cb96ad209d366ffb43c9cf6 223 SUPERFAMILY SSF161098 11 206 2.49E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05300 2f93dbd75cb96ad209d366ffb43c9cf6 223 Gene3D G3DSA:1.10.3720.10 6 222 3.9E-37 T 28-03-2018 CO704_RS01625 a5db24513e7cd7bd8e4a03af47eebfdb 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 5.7E-27 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS01625 a5db24513e7cd7bd8e4a03af47eebfdb 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.6E-36 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS01625 a5db24513e7cd7bd8e4a03af47eebfdb 95 SUPERFAMILY SSF69754 1 95 4.45E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS01625 a5db24513e7cd7bd8e4a03af47eebfdb 95 Gene3D G3DSA:3.30.160.100 1 95 6.5E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 Gene3D G3DSA:1.10.3720.10 15 284 3.6E-38 T 28-03-2018 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 Gene3D G3DSA:1.10.3720.10 302 564 7.9E-32 T 28-03-2018 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 SUPERFAMILY SSF161098 14 280 2.83E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 279 9.9E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 380 564 4.9E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14305 9f0fbcbc8f99f723705144b53e04efe1 570 SUPERFAMILY SSF161098 302 555 4.77E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 Gene3D G3DSA:3.20.20.80 3 476 6.3E-157 T 28-03-2018 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 Pfam PF00232 Glycosyl hydrolase family 1 4 472 2.7E-138 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 SUPERFAMILY SSF51445 5 472 1.84E-164 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 4.4E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 4.4E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 4.4E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 4.4E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS07260 3dc425bbacab76f9d6f6b074c6aa40c5 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 4.4E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS04745 198ab01dc2b9286f45c7b9cd185a9737 142 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 7 141 4.5E-26 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CO704_RS23790 8c2077bb766faf6ba40ea6dd93f77afa 425 Gene3D G3DSA:3.40.50.2000 210 402 1.4E-13 T 28-03-2018 CO704_RS23790 8c2077bb766faf6ba40ea6dd93f77afa 425 Gene3D G3DSA:3.40.50.2000 51 176 0.0048 T 28-03-2018 CO704_RS23790 8c2077bb766faf6ba40ea6dd93f77afa 425 SUPERFAMILY SSF53756 57 420 8.52E-19 T 28-03-2018 CO704_RS23790 8c2077bb766faf6ba40ea6dd93f77afa 425 Pfam PF00534 Glycosyl transferases group 1 240 398 1.8E-11 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS23790 8c2077bb766faf6ba40ea6dd93f77afa 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 211 5.7E-65 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CO704_RS18885 a8bfbb0c33e85a1d833d2a8ab2df96a1 150 Gene3D G3DSA:3.40.140.10 26 150 2.8E-43 T 28-03-2018 CO704_RS18885 a8bfbb0c33e85a1d833d2a8ab2df96a1 150 Pfam PF04002 RadC-like JAB domain 31 149 1.8E-42 T 28-03-2018 IPR025657 RadC-like JAB domain CO704_RS18885 a8bfbb0c33e85a1d833d2a8ab2df96a1 150 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 150 2.4E-41 T 28-03-2018 IPR001405 RadC protein CO704_RS18885 a8bfbb0c33e85a1d833d2a8ab2df96a1 150 SUPERFAMILY SSF102712 44 121 8.11E-7 T 28-03-2018 CO704_RS18885 a8bfbb0c33e85a1d833d2a8ab2df96a1 150 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 99 104 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CO704_RS05825 cdfe740d82353723a7904d7fafbab4d7 167 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 21 141 2.3E-51 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS05825 cdfe740d82353723a7904d7fafbab4d7 167 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 83 95 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS05825 cdfe740d82353723a7904d7fafbab4d7 167 SUPERFAMILY SSF51261 16 165 7.5E-56 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS05825 cdfe740d82353723a7904d7fafbab4d7 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 144 1.9E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS05825 cdfe740d82353723a7904d7fafbab4d7 167 Gene3D G3DSA:2.70.70.10 8 167 2.8E-58 T 28-03-2018 CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 Gene3D G3DSA:3.30.70.100 629 715 3.3E-7 T 28-03-2018 CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 Pfam PF00924 Mechanosensitive ion channel 517 716 3.1E-43 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 SUPERFAMILY SSF50182 560 618 2.19E-10 T 28-03-2018 IPR010920 LSM domain CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 SUPERFAMILY SSF82861 479 558 7.72E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 Gene3D G3DSA:2.30.30.60 577 624 6.3E-8 T 28-03-2018 CO704_RS15990 a0834d09b6bffea0d96377a3d62ffeff 752 SUPERFAMILY SSF82689 632 725 1.7E-9 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 Pfam PF02108 Flagellar assembly protein FliH 98 222 1.5E-39 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 79 97 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 204 229 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 118 135 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 136 158 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 159 186 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 187 203 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 56 78 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS08430 150a865459e8e1172ced191aa609143f 231 PRINTS PR01003 Flagellar assembly protein FliH signature 98 117 1.5E-97 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 SMART SM01009 1 112 3.2E-48 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 Pfam PF06029 AlkA N-terminal domain 3 112 9.3E-33 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 28-03-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 242 1.5E-6 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 SUPERFAMILY SSF48150 102 275 1.92E-45 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 Gene3D G3DSA:1.10.340.30 99 243 1.6E-25 T 28-03-2018 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 Gene3D G3DSA:1.10.1670.10 244 279 3.1E-11 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 SUPERFAMILY SSF55945 2 97 5.18E-26 T 28-03-2018 CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 Gene3D G3DSA:3.30.310.20 1 98 1.3E-34 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CO704_RS07405 e4e405e0e2a24ad205a77a4d79de2712 281 SMART SM00478 130 276 1.6E-18 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 SMART SM00344 7 112 1.4E-26 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 Gene3D G3DSA:1.10.10.10 7 55 1.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 SUPERFAMILY SSF46785 6 66 1.88E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 Pfam PF01037 Lrp/AsnC ligand binding domain 75 138 4.3E-13 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 SUPERFAMILY SSF54909 71 141 9.25E-14 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.7E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.7E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.7E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 52 3.1E-14 T 28-03-2018 CO704_RS18060 fdf3123b7c6d223ee298498d0bc02b66 148 Gene3D G3DSA:3.30.70.920 56 144 1.4E-13 T 28-03-2018 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 1.4E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 1.4E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 SMART SM00345 22 81 9.2E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 1.2E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 Gene3D G3DSA:3.90.1150.10 360 453 1.8E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 Gene3D G3DSA:1.10.10.10 9 83 6.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 Pfam PF00155 Aminotransferase class I and II 140 425 1.3E-26 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 SUPERFAMILY SSF46785 13 83 1.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 Gene3D G3DSA:3.40.640.10 144 359 3.9E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS03985 5f6bac01f7870dbe92264b58978b9b90 458 SUPERFAMILY SSF53383 104 445 9.11E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 5.7E-11 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.7E-11 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 5.7E-11 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 SUPERFAMILY SSF143800 1 80 3.1E-18 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.1E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.955 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05325 553bf7a957927570f831938e9ef2b4a3 86 Pfam PF01197 Ribosomal protein L31 1 78 1.3E-20 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23990 4209cb283b06215998f14c85eff7ac5b 219 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 30 215 27.576 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CO704_RS23990 4209cb283b06215998f14c85eff7ac5b 219 SUPERFAMILY SSF53448 31 215 4.38E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS23990 4209cb283b06215998f14c85eff7ac5b 219 Gene3D G3DSA:3.90.550.10 26 218 2.2E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS23990 4209cb283b06215998f14c85eff7ac5b 219 Pfam PF12804 MobA-like NTP transferase domain 34 186 1.9E-34 T 28-03-2018 IPR025877 MobA-like NTP transferase CO704_RS23990 4209cb283b06215998f14c85eff7ac5b 219 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 32 212 4.4E-65 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 Pfam PF08402 TOBE domain 281 353 6.1E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 Gene3D G3DSA:3.40.50.300 1 251 9.3E-71 T 28-03-2018 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 SUPERFAMILY SSF50331 236 364 1.77E-31 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 Gene3D G3DSA:2.40.50.140 294 346 6.2E-10 T 28-03-2018 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 SMART SM00382 28 211 4.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 Pfam PF00005 ABC transporter 20 161 1.2E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 Gene3D G3DSA:2.40.50.100 252 293 1.1E-11 T 28-03-2018 CO704_RS22690 fff1db5d5e9bba612aa0041159288cec 369 SUPERFAMILY SSF52540 4 243 3.96E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 2.0E-4 T 28-03-2018 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 2.0E-17 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 Pfam PF01467 Cytidylyltransferase-like 6 134 4.7E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 3.5E-61 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.481 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.9E-54 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.9E-54 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.9E-54 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.9E-54 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.9E-54 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 Gene3D G3DSA:3.40.50.620 1 159 2.7E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS23795 989980cbdc78b55e9d43f2fdf8d48fdd 159 SUPERFAMILY SSF52374 3 156 1.85E-45 T 28-03-2018 CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.7E-26 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 Gene3D G3DSA:3.40.50.1000 1 268 1.3E-34 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 4.3E-65 T 28-03-2018 IPR000150 Cof family GO:0016787 CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.3E-61 T 28-03-2018 IPR023214 HAD-like domain CO704_RS23160 d3bf3b01e9cc1c1462a29f65e2cab538 268 SUPERFAMILY SSF56784 1 265 5.86E-68 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03235 3b3e2cd0778df2b73af271fee743a850 206 PIRSF PIRSF006324 1 206 9.3E-49 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS03235 3b3e2cd0778df2b73af271fee743a850 206 Pfam PF01810 LysE type translocator 17 204 2.7E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS20580 8591740a4700ec31f926588777bfc0dd 299 SMART SM00267 117 289 6.1E-48 T 28-03-2018 IPR000160 GGDEF domain CO704_RS20580 8591740a4700ec31f926588777bfc0dd 299 SUPERFAMILY SSF55073 134 287 2.67E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS20580 8591740a4700ec31f926588777bfc0dd 299 Gene3D G3DSA:3.30.70.270 125 297 5.6E-47 T 28-03-2018 CO704_RS20580 8591740a4700ec31f926588777bfc0dd 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 285 7.9E-39 T 28-03-2018 IPR000160 GGDEF domain CO704_RS20580 8591740a4700ec31f926588777bfc0dd 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 287 4.5E-39 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Gene3D G3DSA:3.30.450.20 9 144 8.9E-20 T 28-03-2018 CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SMART SM00267 125 294 8.4E-46 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SUPERFAMILY SSF55785 20 124 9.42E-20 T 28-03-2018 IPR000014 PAS domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 289 3.1E-36 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Gene3D G3DSA:3.30.70.270 145 301 4.6E-48 T 28-03-2018 CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Pfam PF13426 PAS domain 22 124 2.3E-12 T 28-03-2018 IPR000014 PAS domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Gene3D G3DSA:3.20.20.450 302 549 1.0E-88 T 28-03-2018 IPR001633 EAL domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SMART SM00052 304 546 1.5E-96 T 28-03-2018 IPR001633 EAL domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SUPERFAMILY SSF141868 311 546 4.71E-82 T 28-03-2018 IPR001633 EAL domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 Pfam PF00563 EAL domain 310 541 3.0E-68 T 28-03-2018 IPR001633 EAL domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SUPERFAMILY SSF55073 141 296 3.22E-39 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 126 5.7E-15 T 28-03-2018 IPR000014 PAS domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 291 3.5E-34 T 28-03-2018 IPR000160 GGDEF domain CO704_RS12535 b1ec1be9c59500e01804a7ce3e46a3e7 549 SMART SM00086 83 125 5.0E-4 T 28-03-2018 IPR001610 PAC motif CO704_RS15935 298093efa888fd29630bdbd3f1a5ce17 347 Gene3D G3DSA:3.20.20.100 1 328 3.5E-101 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS15935 298093efa888fd29630bdbd3f1a5ce17 347 Pfam PF00248 Aldo/keto reductase family 15 320 3.2E-83 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS15935 298093efa888fd29630bdbd3f1a5ce17 347 SUPERFAMILY SSF51430 1 320 3.54E-105 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS15470 860caad650e45cd0ce949a35928c8981 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 6.0E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15470 860caad650e45cd0ce949a35928c8981 263 SUPERFAMILY SSF161098 56 237 7.33E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15470 860caad650e45cd0ce949a35928c8981 263 Gene3D G3DSA:1.10.3720.10 7 254 9.1E-31 T 28-03-2018 CO704_RS13910 3dd2eedcba87e68350417132ee8ef743 181 Pfam PF05962 HutD 6 174 5.6E-48 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CO704_RS13910 3dd2eedcba87e68350417132ee8ef743 181 Gene3D G3DSA:2.60.120.10 6 107 1.2E-33 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS13910 3dd2eedcba87e68350417132ee8ef743 181 Gene3D G3DSA:2.60.120.10 108 178 3.7E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS13910 3dd2eedcba87e68350417132ee8ef743 181 SUPERFAMILY SSF51182 1 180 4.6E-50 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS15980 7223b2de29427f3af81212bdc2f10447 219 SUPERFAMILY SSF161098 13 202 7.72E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15980 7223b2de29427f3af81212bdc2f10447 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.4E-31 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS15980 7223b2de29427f3af81212bdc2f10447 219 Gene3D G3DSA:1.10.3720.10 1 218 1.7E-44 T 28-03-2018 CO704_RS15980 7223b2de29427f3af81212bdc2f10447 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 6.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 431 1.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 SUPERFAMILY SSF55874 270 430 4.98E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 Gene3D G3DSA:3.30.565.10 283 440 1.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 SMART SM00388 215 281 4.6E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 276 5.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 Gene3D G3DSA:1.10.287.130 192 276 3.1E-7 T 28-03-2018 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 SUPERFAMILY SSF47384 209 275 3.53E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 8.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 8.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 8.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 8.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18665 8b1a287fb63146ec83bdc8ae40241a45 442 SMART SM00387 325 432 5.0E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 Pfam PF10139 Putative bacterial virulence factor 400 711 1.1E-32 T 28-03-2018 IPR017030 Virulence effector, SrfC CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 Pfam PF10139 Putative bacterial virulence factor 12 332 1.7E-54 T 28-03-2018 IPR017030 Virulence effector, SrfC CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 Gene3D G3DSA:1.20.58.60 1 518 0.014 T 28-03-2018 CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 PIRSF PIRSF034586 1 335 4.4E-76 T 28-03-2018 IPR017030 Virulence effector, SrfC CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 PIRSF PIRSF034586 396 713 1.1E-68 T 28-03-2018 IPR017030 Virulence effector, SrfC CO704_RS10630 cc97f201f52ca4df1979f4452b9f27fb 713 PIRSF PIRSF034586 332 399 6.3E-14 T 28-03-2018 IPR017030 Virulence effector, SrfC CO704_RS05260 67fbbda6ede72d71d3738ce592352cab 156 Gene3D G3DSA:1.10.260.40 1 82 1.7E-16 T 28-03-2018 CO704_RS05260 67fbbda6ede72d71d3738ce592352cab 156 SUPERFAMILY SSF47413 2 65 3.38E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS05260 67fbbda6ede72d71d3738ce592352cab 156 Pfam PF13239 2TM domain 79 149 2.4E-14 T 28-03-2018 IPR025698 2TM domain CO704_RS05260 67fbbda6ede72d71d3738ce592352cab 156 SMART SM00530 4 58 4.6E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS05260 67fbbda6ede72d71d3738ce592352cab 156 Pfam PF01381 Helix-turn-helix 5 58 4.2E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Pfam PF01588 Putative tRNA binding domain 582 675 7.9E-21 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 6.0E-208 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 SUPERFAMILY SSF52374 5 141 1.42E-107 T 28-03-2018 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 SUPERFAMILY SSF52374 176 388 1.42E-107 T 28-03-2018 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 SUPERFAMILY SSF57770 142 176 7.98E-13 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Pfam PF09334 tRNA synthetases class I (M) 8 397 2.9E-166 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:1.10.730.10 374 537 2.0E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:2.20.28.20 142 175 7.4E-16 T 28-03-2018 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 42.047 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:2.40.50.140 568 678 6.2E-24 T 28-03-2018 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:2.170.220.10 181 249 5.5E-16 T 28-03-2018 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 SUPERFAMILY SSF50249 571 677 1.49E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 544 678 2.0E-45 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 SUPERFAMILY SSF47323 391 548 4.86E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:3.40.50.620 4 82 2.7E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 1.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CO704_RS07205 c2cd7c1cac6df1e71dce30011200d05d 678 Gene3D G3DSA:3.40.50.620 250 372 4.7E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS11155 4a163532f3815c169acba61471108323 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 126 7.0E-50 T 28-03-2018 IPR013559 YheO-like CO704_RS11155 4a163532f3815c169acba61471108323 215 Gene3D G3DSA:1.10.10.60 142 210 2.0E-5 T 28-03-2018 CO704_RS11155 4a163532f3815c169acba61471108323 215 Pfam PF13309 HTH domain 146 205 4.9E-16 T 28-03-2018 CO704_RS11155 4a163532f3815c169acba61471108323 215 Pfam PF08348 YheO-like PAS domain 10 119 3.7E-32 T 28-03-2018 IPR013559 YheO-like CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 SUPERFAMILY SSF55307 203 319 7.1E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 3.2E-142 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 Gene3D G3DSA:3.40.50.1440 8 213 6.6E-43 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 1.6E-37 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 3.1E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 Gene3D G3DSA:3.30.1330.20 214 324 9.4E-45 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 SMART SM00865 206 324 2.1E-56 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 SUPERFAMILY SSF52490 12 207 1.57E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.294 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 SMART SM00864 12 204 1.3E-112 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS19615 6a6f3cd4c26e0dcd11ab493337bdc020 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PIRSF PIRSF000097 1 270 9.7E-98 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 SUPERFAMILY SSF51430 6 269 7.2E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 8.7E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 8.7E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 8.7E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 8.7E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 8.7E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 Pfam PF00248 Aldo/keto reductase family 18 260 5.3E-50 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 Gene3D G3DSA:3.20.20.100 2 274 1.1E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS02540 ac203aec48bcd35e5361f037441d2736 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CO704_RS05480 38d641357c487453f3fccb286f7c69e0 148 SUPERFAMILY SSF141322 92 147 1.57E-6 T 28-03-2018 CO704_RS05480 38d641357c487453f3fccb286f7c69e0 148 Gene3D G3DSA:2.40.50.140 91 147 3.9E-12 T 28-03-2018 CO704_RS05480 38d641357c487453f3fccb286f7c69e0 148 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 146 4.8E-24 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain CO704_RS12555 66a4abd5eaf64506ff5e44ee95172c88 218 SUPERFAMILY SSF53335 9 218 8.05E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS12555 66a4abd5eaf64506ff5e44ee95172c88 218 Gene3D G3DSA:3.40.50.150 1 218 1.2E-36 T 28-03-2018 CO704_RS12555 66a4abd5eaf64506ff5e44ee95172c88 218 Pfam PF01596 O-methyltransferase 31 190 1.8E-38 T 28-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 Gene3D G3DSA:2.30.330.10 42 136 7.0E-31 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 SUPERFAMILY SSF101801 53 134 4.19E-27 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 52 127 8.4E-34 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 101 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 55 71 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 88 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 116 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 125 3.5E-26 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS08400 b9bbffac62b8e6f9d6dbd45fca993ed5 136 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 48 1.7E-20 T 28-03-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal CO704_RS08915 c157eeb13988aee7d2a623737f026128 324 SUPERFAMILY SSF53807 39 317 3.57E-36 T 28-03-2018 CO704_RS08915 c157eeb13988aee7d2a623737f026128 324 Gene3D G3DSA:3.40.50.1980 21 155 1.4E-17 T 28-03-2018 CO704_RS08915 c157eeb13988aee7d2a623737f026128 324 Gene3D G3DSA:3.40.50.1980 156 324 1.5E-27 T 28-03-2018 CO704_RS08915 c157eeb13988aee7d2a623737f026128 324 Pfam PF01497 Periplasmic binding protein 42 296 6.2E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS19010 7fa1b0702ad66611fc61e0b5e9a225eb 413 PIRSF PIRSF000524 9 412 1.6E-102 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CO704_RS19010 7fa1b0702ad66611fc61e0b5e9a225eb 413 SUPERFAMILY SSF53383 4 392 1.16E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS19010 7fa1b0702ad66611fc61e0b5e9a225eb 413 Pfam PF00266 Aminotransferase class-V 19 353 3.2E-24 T 28-03-2018 IPR000192 Aminotransferase class V domain CO704_RS19010 7fa1b0702ad66611fc61e0b5e9a225eb 413 Gene3D G3DSA:3.90.1150.10 286 413 1.2E-32 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS19010 7fa1b0702ad66611fc61e0b5e9a225eb 413 Gene3D G3DSA:3.40.640.10 13 285 1.1E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 8.5E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 8.5E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 8.5E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 8.5E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 8.5E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 4.1E-166 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 SUPERFAMILY SSF56601 23 473 5.77E-99 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 447 1.1E-173 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CO704_RS01745 41740607518cc857a6e1619aa7ace567 477 Gene3D G3DSA:3.40.710.10 20 477 2.4E-40 T 28-03-2018 CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 Pfam PF00005 ABC transporter 23 163 1.8E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 Pfam PF00005 ABC transporter 276 429 1.3E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 Gene3D G3DSA:3.40.50.300 1 244 1.8E-34 T 28-03-2018 CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 SUPERFAMILY SSF52540 252 479 1.74E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 SMART SM00382 28 214 4.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 SMART SM00382 285 480 5.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 SUPERFAMILY SSF52540 4 225 4.37E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16535 f3613cb09bc5498e0adce36ba9154c40 492 Gene3D G3DSA:3.40.50.300 245 482 2.2E-42 T 28-03-2018 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 SUPERFAMILY SSF53187 322 405 1.56E-81 T 28-03-2018 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 SUPERFAMILY SSF53187 1 209 1.56E-81 T 28-03-2018 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 PIRSF PIRSF037215 1 408 2.4E-183 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 Pfam PF07687 Peptidase dimerisation domain 206 303 9.0E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 Gene3D G3DSA:3.40.630.10 1 408 6.2E-49 T 28-03-2018 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 3.3E-158 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.775 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 SUPERFAMILY SSF55031 208 320 2.44E-44 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS14355 0611e5cc2aa4d3d642e6e2b467e5f07c 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 2.0E-16 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 291 1.3E-99 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 PIRSF PIRSF000371 1 299 4.1E-90 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 1.4E-8 T 28-03-2018 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 SUPERFAMILY SSF102114 125 266 1.24E-14 T 28-03-2018 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 Gene3D G3DSA:3.80.30.10 121 299 1.1E-28 T 28-03-2018 CO704_RS10390 6200f7c5bf93c88c29a520b4801aefad 299 Pfam PF04055 Radical SAM superfamily 19 229 9.7E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS18755 a9f2047f3382424f1019115e609afea3 179 SUPERFAMILY SSF49401 32 178 3.48E-33 T 28-03-2018 IPR008966 Adhesion domain CO704_RS18755 a9f2047f3382424f1019115e609afea3 179 Pfam PF00419 Fimbrial protein 33 178 1.7E-21 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18755 a9f2047f3382424f1019115e609afea3 179 Gene3D G3DSA:2.60.40.1090 30 179 3.0E-31 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS15005 33507b6e19d4eea7d7e3f39f4e7b27f9 110 Pfam PF07377 Protein of unknown function (DUF1493) 15 110 4.4E-20 T 28-03-2018 IPR010862 Protein of unknown function DUF1493 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 Gene3D G3DSA:3.40.1190.20 1 307 2.4E-73 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 SUPERFAMILY SSF53613 4 300 3.43E-74 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 Hamap MF_01987 Ribokinase [rbsK]. 3 303 22.332 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 Pfam PF00294 pfkB family carbohydrate kinase 4 292 3.0E-59 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 PRINTS PR00990 Ribokinase signature 34 53 7.4E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 PRINTS PR00990 Ribokinase signature 219 230 7.4E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 PRINTS PR00990 Ribokinase signature 107 120 7.4E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 PRINTS PR00990 Ribokinase signature 175 190 7.4E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS00135 fca66a8e017845327b18e59e3dc5721b 313 PRINTS PR00990 Ribokinase signature 7 28 7.4E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS06640 03e6eb0dc63f7211f3919341f851280e 257 SUPERFAMILY SSF53474 13 252 1.5E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS06640 03e6eb0dc63f7211f3919341f851280e 257 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 16 251 1.0E-79 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CO704_RS06640 03e6eb0dc63f7211f3919341f851280e 257 Gene3D G3DSA:3.40.50.1820 3 254 7.8E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS06640 03e6eb0dc63f7211f3919341f851280e 257 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 253 34.838 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CO704_RS06640 03e6eb0dc63f7211f3919341f851280e 257 Pfam PF12697 Alpha/beta hydrolase family 18 244 2.0E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 Gene3D G3DSA:2.40.30.10 189 268 3.1E-22 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 SUPERFAMILY SSF51905 3 188 2.95E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 SUPERFAMILY SSF51905 337 395 2.95E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 SUPERFAMILY SSF160996 190 338 4.58E-43 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 5.3E-7 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 5.3E-7 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.3E-7 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 Pfam PF03486 HI0933-like protein 5 392 3.0E-156 T 28-03-2018 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 Gene3D G3DSA:1.10.8.260 269 321 2.1E-14 T 28-03-2018 IPR023166 HI0933 insert-like domain CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 Gene3D G3DSA:3.50.50.60 4 188 5.6E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00365 6c0d31f0c487f6fb8d0e94170b05a701 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 4.5E-128 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 Gene3D G3DSA:3.40.50.10740 1 146 1.2E-46 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 PIRSF PIRSF028757 1 298 1.2E-78 T 28-03-2018 IPR003507 Peptidase family S66 CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 Pfam PF02016 LD-carboxypeptidase 4 284 2.6E-73 T 28-03-2018 IPR003507 Peptidase family S66 CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 SUPERFAMILY SSF141986 138 288 6.15E-41 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 SUPERFAMILY SSF52317 3 161 2.11E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS09290 7736968697a946a79f8e34bf83300a3a 303 Gene3D G3DSA:3.50.30.60 147 300 3.9E-38 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CO704_RS03355 548ef6eb454a35fa99f8476a67b93219 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 1.1E-107 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CO704_RS03355 548ef6eb454a35fa99f8476a67b93219 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 3.9E-76 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CO704_RS03355 548ef6eb454a35fa99f8476a67b93219 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CO704_RS03355 548ef6eb454a35fa99f8476a67b93219 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.159 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 1.5E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 1.5E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 1.5E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.5E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 1.5E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 Pfam PF00232 Glycosyl hydrolase family 1 3 458 3.6E-133 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 SUPERFAMILY SSF51445 2 452 5.68E-160 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS13570 a5e521bcf028158bfd8245bc612de2b4 463 Gene3D G3DSA:3.20.20.80 2 463 1.2E-147 T 28-03-2018 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 100 117 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 SUPERFAMILY SSF49354 23 146 7.85E-38 T 28-03-2018 IPR008962 PapD-like CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 PRINTS PR00969 Pili chaperone signature 101 118 1.2E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 PRINTS PR00969 Pili chaperone signature 163 178 1.2E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 PRINTS PR00969 Pili chaperone signature 128 143 1.2E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 PRINTS PR00969 Pili chaperone signature 28 37 1.2E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 PRINTS PR00969 Pili chaperone signature 73 94 1.2E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 Gene3D G3DSA:2.60.40.10 27 147 1.7E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 Gene3D G3DSA:2.60.40.10 148 231 1.9E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 223 9.1E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 146 5.9E-39 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CO704_RS02355 3e91fbc7ed5e6a6d4c1bfbe34aefe8de 231 SUPERFAMILY SSF49584 148 225 2.49E-21 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 5.4E-163 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 225.766 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 SUPERFAMILY SSF51658 1 133 3.14E-81 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 SUPERFAMILY SSF51658 163 383 3.14E-81 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 393 1.1E-220 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 PIRSF PIRSF016049 1 392 3.7E-184 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 Gene3D G3DSA:3.20.20.150 173 391 4.4E-49 T 28-03-2018 CO704_RS20480 a81ffbea8314d9e3d8ea3a7edcf0a323 394 Gene3D G3DSA:3.20.20.150 1 172 6.7E-64 T 28-03-2018 CO704_RS24195 1f2a63c7c5c5f4c32810757d4ce74047 104 Pfam PF05336 L-rhamnose mutarotase 3 101 4.5E-26 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 CO704_RS24195 1f2a63c7c5c5f4c32810757d4ce74047 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 30.86 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CO704_RS24195 1f2a63c7c5c5f4c32810757d4ce74047 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 4.3E-52 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CO704_RS24195 1f2a63c7c5c5f4c32810757d4ce74047 104 SUPERFAMILY SSF54909 1 103 3.37E-35 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS24195 1f2a63c7c5c5f4c32810757d4ce74047 104 Gene3D G3DSA:3.30.70.100 2 99 2.2E-4 T 28-03-2018 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 SUPERFAMILY SSF48179 177 469 4.69E-131 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 Gene3D G3DSA:1.20.5.320 436 469 7.6E-22 T 28-03-2018 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 2.9E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 SUPERFAMILY SSF51735 4 173 5.92E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PIRSF PIRSF000109 1 470 1.4E-240 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 Gene3D G3DSA:3.40.50.720 1 180 9.8E-35 T 28-03-2018 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 SMART SM01350 179 468 4.7E-222 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 Gene3D G3DSA:1.10.1040.10 181 435 1.6E-111 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.0E-132 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS07645 808556197916d2c2050f1ae41f593c5b 470 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 6.3E-229 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 Gene3D G3DSA:3.40.50.720 2 256 6.3E-55 T 28-03-2018 CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.4E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.4E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.4E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.4E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.4E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 Pfam PF00106 short chain dehydrogenase 3 191 3.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 4.5E-4 T 28-03-2018 CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 SUPERFAMILY SSF51735 3 254 1.9E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS05500 c1354e83a4bdc1794237b30ba6310bbc 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS02795 fe5b0c62f0a6335bd495346853779cd2 60 SUPERFAMILY SSF54786 1 60 4.71E-15 T 28-03-2018 CO704_RS02795 fe5b0c62f0a6335bd495346853779cd2 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 60 3.6E-17 T 28-03-2018 IPR012933 HicA mRNA interferase family GO:0003729 CO704_RS02795 fe5b0c62f0a6335bd495346853779cd2 60 Gene3D G3DSA:3.30.920.30 1 60 8.8E-19 T 28-03-2018 CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 Gene3D G3DSA:3.40.190.10 31 128 5.6E-20 T 28-03-2018 CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 Pfam PF03180 NLPA lipoprotein 32 270 1.7E-96 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 Gene3D G3DSA:3.40.190.10 129 270 4.7E-50 T 28-03-2018 CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 PIRSF PIRSF002854 1 270 2.5E-101 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 SUPERFAMILY SSF53850 32 270 2.66E-82 T 28-03-2018 CO704_RS11040 d63c8be23f8d13ba6c62148661cefd4d 270 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 270 9.4E-125 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS00875 d010ff6ced8f9d7328a4d13178598f64 118 SUPERFAMILY SSF63520 15 110 1.57E-7 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS00875 d010ff6ced8f9d7328a4d13178598f64 118 Gene3D G3DSA:1.10.1790.10 13 113 6.4E-7 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 PRINTS PR00369 Flavodoxin signature 53 64 3.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 PRINTS PR00369 Flavodoxin signature 108 127 3.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 PRINTS PR00369 Flavodoxin signature 84 94 3.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 Gene3D G3DSA:3.40.50.360 1 149 5.6E-27 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 Pfam PF00258 Flavodoxin 6 129 7.1E-23 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS03515 94a6e19baee38e30dd666291dafe2162 149 SUPERFAMILY SSF52218 1 148 1.33E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 272 291 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.5E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 2.4E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 316 333 2.4E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.4E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 2.4E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 2.4E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 316 332 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 Gene3D G3DSA:2.40.160.10 10 364 1.2E-53 T 28-03-2018 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 Pfam PF00267 Gram-negative porin 27 364 5.9E-149 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS06745 ca6006ec59fafee2ef9ff364ea5da5eb 364 SUPERFAMILY SSF56935 22 364 1.05E-83 T 28-03-2018 CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.2E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 SUPERFAMILY SSF52540 3 266 2.51E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 SMART SM00382 32 245 2.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 Pfam PF00005 ABC transporter 24 187 1.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.8E-16 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS10445 3477f41bc79791003d73269ec0aab488 330 Gene3D G3DSA:3.40.50.300 1 329 1.0E-58 T 28-03-2018 CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 Gene3D G3DSA:3.30.1340.10 1 85 3.7E-32 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 SUPERFAMILY SSF55594 1 82 2.36E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.4E-31 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.2E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CO704_RS05835 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CO704_RS26015 39cbbdd211ede0875367a351d83ccccf 117 TIGRFAM TIGR02809 phasin_3: phasin family protein 7 112 8.4E-32 T 28-03-2018 IPR014176 Phasin, subfamily 3 CO704_RS26015 39cbbdd211ede0875367a351d83ccccf 117 Pfam PF09361 Phasin protein 10 109 5.4E-13 T 28-03-2018 IPR018968 Phasin CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF55008 5 69 1.57E-11 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Gene3D G3DSA:1.20.1110.10 282 535 1.2E-43 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Pfam PF00403 Heavy-metal-associated domain 8 61 3.0E-9 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Pfam PF00403 Heavy-metal-associated domain 104 159 1.6E-14 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Pfam PF00122 E1-E2 ATPase 320 500 1.3E-51 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF81665 420 515 4.45E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF81665 286 323 4.45E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF81665 767 784 4.45E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Gene3D G3DSA:3.30.70.100 1 84 5.2E-13 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Gene3D G3DSA:3.30.70.100 97 183 1.6E-20 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 1.0E-25 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 233 827 1.4E-190 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 827 5.0E-183 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF56784 519 539 9.22E-60 T 28-03-2018 IPR023214 HAD-like domain CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF56784 576 824 9.22E-60 T 28-03-2018 IPR023214 HAD-like domain CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 518 731 1.4E-47 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 105 134 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 796 3.8E-86 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Gene3D G3DSA:3.40.50.1000 646 784 3.3E-45 T 28-03-2018 IPR023214 HAD-like domain CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF81653 322 419 1.11E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 Gene3D G3DSA:3.40.1110.10 536 645 1.6E-31 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 237 256 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 791 805 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 141 161 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 695 712 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 309 327 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 442 456 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 PRINTS PR00943 Copper-transporting ATPase signature 504 519 7.6E-11 T 28-03-2018 CO704_RS05470 452a377efd60297ad2999b8e883c63d1 834 SUPERFAMILY SSF55008 102 167 8.77E-19 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CO704_RS11285 eba46b62d0fb148fc0d4a62381350cbc 365 Gene3D G3DSA:3.40.50.1980 11 156 5.4E-23 T 28-03-2018 CO704_RS11285 eba46b62d0fb148fc0d4a62381350cbc 365 Pfam PF01497 Periplasmic binding protein 86 308 3.9E-24 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS11285 eba46b62d0fb148fc0d4a62381350cbc 365 Gene3D G3DSA:3.40.50.1980 157 341 5.3E-39 T 28-03-2018 CO704_RS11285 eba46b62d0fb148fc0d4a62381350cbc 365 SUPERFAMILY SSF53807 21 335 1.26E-47 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 Gene3D G3DSA:3.50.50.60 1 163 5.2E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 Gene3D G3DSA:3.40.50.720 164 331 8.3E-33 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 6.5E-66 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 SUPERFAMILY SSF51905 1 365 9.2E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 SUPERFAMILY SSF55424 336 450 1.89E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PIRSF PIRSF000350 1 447 7.0E-85 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.1E-215 T 28-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 Gene3D G3DSA:3.30.390.30 332 450 1.3E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-27 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.3E-27 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.3E-27 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.3E-27 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.3E-27 T 28-03-2018 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.0E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00325 b934f524df5ac9311aa8dd62c89ff61c 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.2E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 682 800 1.9E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 935 968 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 568 601 44.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 602 635 200.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 459 493 300.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 891 924 120.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 744 777 18.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SMART SM00028 779 812 160.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 893 949 9.2E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 511 541 6.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 950 1086 0.001 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 542 638 1.4E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 419 510 4.6E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Gene3D G3DSA:1.25.40.10 801 873 0.026 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SUPERFAMILY SSF48452 741 818 3.57E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SUPERFAMILY SSF48452 897 1011 3.57E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 SUPERFAMILY SSF48452 477 633 4.43E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04860 90d21083c6f7ec3644b9af71f8aae39b 1090 Pfam PF17128 Domain of unknown function (DUF5107) 40 344 3.1E-62 T 28-03-2018 IPR033396 Domain of unknown function DUF5107 CO704_RS13885 4844a23beebc2fdf827f71e0f7edbf90 113 Pfam PF04355 SmpA / OmlA family 30 96 1.2E-12 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CO704_RS13885 4844a23beebc2fdf827f71e0f7edbf90 113 Gene3D G3DSA:3.30.1450.10 30 102 1.5E-6 T 28-03-2018 CO704_RS09495 81e597fa13b5c55797474bcaaf849e8b 443 Pfam PF07690 Major Facilitator Superfamily 25 379 3.9E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS09495 81e597fa13b5c55797474bcaaf849e8b 443 PIRSF PIRSF002808 1 442 2.1E-45 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS09495 81e597fa13b5c55797474bcaaf849e8b 443 Gene3D G3DSA:1.20.1250.20 249 442 3.4E-32 T 28-03-2018 CO704_RS09495 81e597fa13b5c55797474bcaaf849e8b 443 SUPERFAMILY SSF103473 12 436 6.28E-85 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09495 81e597fa13b5c55797474bcaaf849e8b 443 Gene3D G3DSA:1.20.1250.20 10 212 1.1E-34 T 28-03-2018 CO704_RS08230 29bbe0754dcf659b1f0069b98d8ff62d 224 SUPERFAMILY SSF56235 1 224 2.85E-76 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS08230 29bbe0754dcf659b1f0069b98d8ff62d 224 Gene3D G3DSA:3.60.20.10 1 216 2.3E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS08230 29bbe0754dcf659b1f0069b98d8ff62d 224 Pfam PF06267 Family of unknown function (DUF1028) 2 191 4.7E-64 T 28-03-2018 IPR010430 Protein of unknown function DUF1028 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 Hamap MF_00173 Arginine repressor [argR]. 1 159 41.849 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 Pfam PF02863 Arginine repressor, C-terminal domain 88 152 9.0E-14 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 Gene3D G3DSA:3.30.1360.40 82 153 1.1E-16 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 94 156 6.0E-4 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 PRINTS PR01467 Bacterial arginine repressor signature 95 108 4.1E-13 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 PRINTS PR01467 Bacterial arginine repressor signature 29 42 4.1E-13 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 PRINTS PR01467 Bacterial arginine repressor signature 46 61 4.1E-13 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 PRINTS PR01467 Bacterial arginine repressor signature 125 140 4.1E-13 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 SUPERFAMILY SSF46785 9 74 6.12E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 Pfam PF01316 Arginine repressor, DNA binding domain 9 75 4.4E-15 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 Gene3D G3DSA:1.10.10.10 10 75 4.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01965 ff2653916279430dc55fedef0c1b87f7 159 SUPERFAMILY SSF55252 88 154 3.66E-13 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 SMART SM00382 24 207 5.7E-21 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 213 1.3E-107 T 28-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 Gene3D G3DSA:3.40.50.300 2 228 1.6E-62 T 28-03-2018 CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 Pfam PF00005 ABC transporter 18 157 1.5E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS19755 aea5407d091a7ccfa202fbe00ec56611 232 SUPERFAMILY SSF52540 1 222 7.1E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 Gene3D G3DSA:1.10.260.40 10 62 1.5E-17 T 28-03-2018 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 Gene3D G3DSA:3.40.50.2300 63 182 3.4E-28 T 28-03-2018 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 SUPERFAMILY SSF47413 10 67 8.25E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 Pfam PF13377 Periplasmic binding protein-like domain 178 337 3.3E-42 T 28-03-2018 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 6.7E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 SMART SM00354 9 79 1.1E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 SUPERFAMILY SSF53822 68 341 6.09E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS23580 0d4d32d3c79414712e5f1884b51ad52b 344 Gene3D G3DSA:3.40.50.2300 183 340 3.0E-47 T 28-03-2018 CO704_RS21785 8b7f6c01bb4332e3c5ec314d15c87d6c 234 SUPERFAMILY SSF53098 75 191 2.07E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS21785 8b7f6c01bb4332e3c5ec314d15c87d6c 234 Gene3D G3DSA:3.30.420.10 72 210 8.4E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS21785 8b7f6c01bb4332e3c5ec314d15c87d6c 234 Pfam PF13610 DDE domain 75 212 2.1E-46 T 28-03-2018 IPR032874 DDE domain CO704_RS21785 8b7f6c01bb4332e3c5ec314d15c87d6c 234 Gene3D G3DSA:1.10.10.10 2 60 1.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16985 550aaf125a62fad671ea4f24f4a59cdd 445 Pfam PF07157 DNA circularisation protein N-terminus 17 101 8.3E-24 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS16985 550aaf125a62fad671ea4f24f4a59cdd 445 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 17 156 4.0E-20 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS18465 a0c643b0fb7ad4f3f6beb3b257acf29d 255 Gene3D G3DSA:1.20.1170.10 2 191 1.4E-4 T 28-03-2018 CO704_RS18465 a0c643b0fb7ad4f3f6beb3b257acf29d 255 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 252 2.9E-70 T 28-03-2018 IPR018648 Protein of unknown function DUF2076 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 Pfam PF01578 Cytochrome C assembly protein 7 184 3.3E-34 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 8.3E-63 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06195 e757f7caaca59c3880ba108caec082a1 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 224 9.6E-83 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 Pfam PF01546 Peptidase family M20/M25/M40 85 413 1.7E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 SUPERFAMILY SSF53187 344 417 5.71E-81 T 28-03-2018 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 SUPERFAMILY SSF53187 7 231 5.71E-81 T 28-03-2018 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 Gene3D G3DSA:3.40.630.10 8 256 2.3E-38 T 28-03-2018 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 Pfam PF07687 Peptidase dimerisation domain 220 312 1.0E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 413 2.4E-115 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 Gene3D G3DSA:3.40.630.10 257 419 5.5E-19 T 28-03-2018 CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 SUPERFAMILY SSF55031 221 337 1.47E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS19005 963d7c0859a3e34ab36c11cb85062c49 419 PIRSF PIRSF001235 11 419 1.3E-129 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 5.9E-203 T 28-03-2018 IPR017702 Putative carbamoyltransferase YgeW CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 Gene3D G3DSA:3.40.50.1370 7 176 1.4E-33 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 5.8E-25 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 5.8E-41 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.7E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.7E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.7E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 SUPERFAMILY SSF53671 18 373 1.7E-57 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 9.2E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 9.2E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 9.2E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS11020 7a12427a121ad091fa488f591cf33a16 395 Gene3D G3DSA:3.40.50.1370 177 361 1.4E-36 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.495 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 4.0E-80 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 SUPERFAMILY SSF55194 2 184 2.75E-71 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 Pfam PF01765 Ribosome recycling factor 20 183 4.1E-63 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 Gene3D G3DSA:1.10.132.20 2 73 1.2E-9 T 28-03-2018 CO704_RS19295 c22ffe3662860aab84f4258ab8003d84 185 Gene3D G3DSA:1.10.132.20 74 184 1.6E-36 T 28-03-2018 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 SUPERFAMILY SSF53187 179 496 1.85E-125 T 28-03-2018 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.0E-33 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 Gene3D G3DSA:3.40.220.10 1 157 4.8E-31 T 28-03-2018 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.341 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 Gene3D G3DSA:3.40.630.10 170 500 1.8E-134 T 28-03-2018 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 SUPERFAMILY SSF52949 1 184 5.18E-52 T 28-03-2018 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 1.5E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 1.5E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 1.5E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 1.5E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 1.5E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.1E-123 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS02050 6767f33704087fc386fb06867ef25337 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 SUPERFAMILY SSF82689 989 1087 9.68E-16 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Gene3D G3DSA:2.30.30.60 937 986 7.6E-12 T 28-03-2018 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Gene3D G3DSA:3.30.70.100 989 1083 8.1E-11 T 28-03-2018 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Gene3D G3DSA:1.20.5.110 223 694 5.0E-4 T 28-03-2018 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 SUPERFAMILY SSF82861 838 920 1.44E-7 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Pfam PF12795 Mechanosensitive ion channel porin domain 31 258 1.8E-60 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Pfam PF00924 Mechanosensitive ion channel 879 1078 2.5E-50 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 481 818 4.3E-115 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CO704_RS21035 4bb71cbeb4d6cf0aff2681324710b5e5 1112 SUPERFAMILY SSF50182 922 987 1.54E-16 T 28-03-2018 IPR010920 LSM domain CO704_RS03790 aecebae90278fea9268342979e816302 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 3.6E-124 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CO704_RS03790 aecebae90278fea9268342979e816302 321 Pfam PF01380 SIS domain 39 169 4.4E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS03790 aecebae90278fea9268342979e816302 321 Gene3D G3DSA:3.40.50.10490 1 195 1.4E-47 T 28-03-2018 CO704_RS03790 aecebae90278fea9268342979e816302 321 SUPERFAMILY SSF54631 265 317 1.66E-9 T 28-03-2018 CO704_RS03790 aecebae90278fea9268342979e816302 321 SMART SM00116 208 256 14.0 T 28-03-2018 IPR000644 CBS domain CO704_RS03790 aecebae90278fea9268342979e816302 321 SMART SM00116 272 320 0.18 T 28-03-2018 IPR000644 CBS domain CO704_RS03790 aecebae90278fea9268342979e816302 321 Gene3D G3DSA:3.10.580.10 196 318 5.6E-19 T 28-03-2018 CO704_RS03790 aecebae90278fea9268342979e816302 321 Pfam PF00571 CBS domain 267 315 1.9E-6 T 28-03-2018 IPR000644 CBS domain CO704_RS03790 aecebae90278fea9268342979e816302 321 Pfam PF00571 CBS domain 199 256 0.001 T 28-03-2018 IPR000644 CBS domain CO704_RS03790 aecebae90278fea9268342979e816302 321 PIRSF PIRSF004692 1 321 1.5E-121 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CO704_RS03790 aecebae90278fea9268342979e816302 321 SUPERFAMILY SSF53697 3 255 1.11E-54 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 Gene3D G3DSA:1.10.287.470 101 147 5.2E-9 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 Pfam PF13437 HlyD family secretion protein 153 231 4.3E-11 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 SUPERFAMILY SSF111369 42 214 3.92E-26 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 Gene3D G3DSA:2.40.50.100 148 261 4.6E-5 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 230 8.4E-43 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 Pfam PF13533 Biotin-lipoyl like 43 92 3.3E-17 T 28-03-2018 CO704_RS13480 57d5585eb3d8c6b3b28ab1fddafa6534 285 Gene3D G3DSA:2.40.50.100 43 100 1.9E-19 T 28-03-2018 CO704_RS16305 9a7d40ec73bac1d4bc11b300f24a269f 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 4.7E-46 T 28-03-2018 IPR009698 Protein of unknown function DUF1282 CO704_RS09830 d13ee4e16d109192efa35585339293c6 302 Pfam PF00483 Nucleotidyl transferase 10 276 4.2E-25 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS09830 d13ee4e16d109192efa35585339293c6 302 SUPERFAMILY SSF53448 8 293 9.46E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS09830 d13ee4e16d109192efa35585339293c6 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.7E-113 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CO704_RS09830 d13ee4e16d109192efa35585339293c6 302 Gene3D G3DSA:3.90.550.10 1 302 3.0E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 SUPERFAMILY SSF51905 23 155 2.05E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 SUPERFAMILY SSF51905 190 357 2.05E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 518 3.6E-230 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 518 52.723 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 Gene3D G3DSA:3.50.50.60 14 544 7.0E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09370 de87be4608f9d8b2dd8c6a2b1fef086a 552 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 516 1.7E-201 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CO704_RS22530 c8d05757a8a0720cd39aa4218281ca59 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 92 2.0E-20 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CO704_RS22530 c8d05757a8a0720cd39aa4218281ca59 93 Pfam PF15940 Family of unknown function 1 89 9.9E-38 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CO704_RS22530 c8d05757a8a0720cd39aa4218281ca59 93 PIRSF PIRSF030798 1 93 1.8E-38 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.605 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.5E-236 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 Pfam PF00171 Aldehyde dehydrogenase family 20 479 4.1E-175 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 Gene3D G3DSA:3.40.309.10 268 465 3.7E-69 T 28-03-2018 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 SUPERFAMILY SSF53720 7 482 2.88E-171 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS11305 5f8e435383b12b718d5536ec072fbb2b 490 Gene3D G3DSA:3.40.605.10 1 267 1.3E-105 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS03040 6ea0e3f12f5ef6466b152aba0edd029f 203 Pfam PF01292 Prokaryotic cytochrome b561 14 202 1.1E-24 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS03040 6ea0e3f12f5ef6466b152aba0edd029f 203 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 168 190 1.8E-5 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CO704_RS03040 6ea0e3f12f5ef6466b152aba0edd029f 203 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 1.8E-5 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CO704_RS03040 6ea0e3f12f5ef6466b152aba0edd029f 203 Gene3D G3DSA:1.20.950.20 6 203 5.5E-35 T 28-03-2018 CO704_RS03040 6ea0e3f12f5ef6466b152aba0edd029f 203 SUPERFAMILY SSF81342 11 203 4.55E-34 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 SUPERFAMILY SSF51735 162 315 2.72E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 7.0E-24 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 PIRSF PIRSF000445 1 418 1.2E-153 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.683 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Gene3D G3DSA:3.40.50.720 180 344 6.8E-24 T 28-03-2018 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.3E-48 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Gene3D G3DSA:1.10.1200.70 345 418 6.9E-24 T 28-03-2018 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 2.1E-165 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.7E-48 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 SUPERFAMILY SSF69075 317 418 1.7E-27 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS09665 874602a20f2fef063aff9a05f68419b4 418 SUPERFAMILY SSF69742 1 158 7.19E-47 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 Pfam PF03023 MviN-like protein 28 477 1.3E-154 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 507 5.1E-171 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PIRSF PIRSF002869 1 511 5.4E-180 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.348 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS14690 b7b117d276182253a8d537ab04ae0631 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-86 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 445 600 3.1E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Gene3D G3DSA:1.10.287.950 445 634 7.4E-47 T 28-03-2018 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 511 1.9E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 1.9E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 1.9E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.9E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 SMART SM00283 386 633 8.5E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Gene3D G3DSA:3.30.450.20 32 184 3.3E-9 T 28-03-2018 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 SMART SM00304 331 385 0.0016 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 SUPERFAMILY SSF58104 353 634 4.32E-72 T 28-03-2018 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Pfam PF02743 Cache domain 49 293 2.3E-22 T 28-03-2018 IPR033479 Double Cache domain 1 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Gene3D G3DSA:3.30.450.20 185 308 1.1E-12 T 28-03-2018 CO704_RS05320 3ce31cc843ea3eab565a27ce9f095e37 634 Gene3D G3DSA:1.10.287.1060 330 444 0.0032 T 28-03-2018 CO704_RS00685 9ca04afb42b2413d636ec4d60b482113 108 Pfam PF00581 Rhodanese-like domain 10 98 3.8E-15 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS00685 9ca04afb42b2413d636ec4d60b482113 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.383 T 28-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS00685 9ca04afb42b2413d636ec4d60b482113 108 Gene3D G3DSA:3.40.250.10 1 108 8.3E-29 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS00685 9ca04afb42b2413d636ec4d60b482113 108 SUPERFAMILY SSF52821 1 100 8.51E-30 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS00685 9ca04afb42b2413d636ec4d60b482113 108 SMART SM00450 7 102 1.4E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS20195 077a46f3bfdae3d864a69e3493e80c4d 448 PIRSF PIRSF006351 9 442 1.3E-139 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS20195 077a46f3bfdae3d864a69e3493e80c4d 448 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 20 434 2.7E-110 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS20195 077a46f3bfdae3d864a69e3493e80c4d 448 Pfam PF02378 Phosphotransferase system, EIIC 36 359 1.2E-56 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS03810 0ec3c471a46dce44f8d61bdab58f09b1 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 113 1.2E-38 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS03810 0ec3c471a46dce44f8d61bdab58f09b1 120 Gene3D G3DSA:2.40.33.40 3 118 4.7E-40 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS03810 0ec3c471a46dce44f8d61bdab58f09b1 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 5.0E-40 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS03810 0ec3c471a46dce44f8d61bdab58f09b1 120 SUPERFAMILY SSF141530 3 118 6.41E-37 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 SMART SM00448 1 112 1.4E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 Gene3D G3DSA:3.40.50.2300 1 119 1.7E-32 T 28-03-2018 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 5.6E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 SMART SM00862 149 224 7.8E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 Gene3D G3DSA:1.10.10.10 120 228 1.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.5E-96 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 SUPERFAMILY SSF52172 1 118 7.97E-38 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS11400 590abdfd589b8bea2b2cc8f760a4ce29 228 SUPERFAMILY SSF46894 127 225 2.15E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS17195 bb9af67a33ec96e1bb73d6268bfff6e0 224 Gene3D G3DSA:1.10.3720.10 10 224 3.4E-41 T 28-03-2018 CO704_RS17195 bb9af67a33ec96e1bb73d6268bfff6e0 224 SUPERFAMILY SSF161098 14 210 1.57E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17195 bb9af67a33ec96e1bb73d6268bfff6e0 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 3.9E-25 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS17195 bb9af67a33ec96e1bb73d6268bfff6e0 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.9E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02420 6b24070b43506125268ebd1baabc38ff 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 5.1E-84 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS02420 6b24070b43506125268ebd1baabc38ff 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 5.4E-82 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS02420 6b24070b43506125268ebd1baabc38ff 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.813 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS02420 6b24070b43506125268ebd1baabc38ff 217 Gene3D G3DSA:3.90.870.10 5 217 1.2E-90 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS02420 6b24070b43506125268ebd1baabc38ff 217 SUPERFAMILY SSF55821 7 210 1.24E-85 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS14865 e05e56fb9b5b637369c4ab08e7e363e9 184 SUPERFAMILY SSF89155 2 180 1.7E-44 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS14865 e05e56fb9b5b637369c4ab08e7e363e9 184 PIRSF PIRSF004690 1 184 2.3E-59 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CO704_RS14865 e05e56fb9b5b637369c4ab08e7e363e9 184 Gene3D G3DSA:1.10.3480.10 1 184 1.7E-36 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS14865 e05e56fb9b5b637369c4ab08e7e363e9 184 Pfam PF02613 Nitrate reductase delta subunit 38 147 7.7E-13 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 Pfam PF02733 Dak1 domain 36 323 2.4E-98 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 SMART SM01120 381 546 9.8E-38 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 Pfam PF02734 DAK2 domain 382 545 4.2E-32 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 Gene3D G3DSA:3.40.50.10440 12 185 1.4E-67 T 28-03-2018 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 SUPERFAMILY SSF101473 352 546 4.19E-44 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 Gene3D G3DSA:3.30.1180.20 186 334 6.6E-36 T 28-03-2018 CO704_RS21795 8a258410ea2842dce64a86aec692a17d 549 SUPERFAMILY SSF82549 2 330 2.46E-102 T 28-03-2018 CO704_RS21600 e627a9a6a638ac66d85fa8053ffc7d4c 86 SMART SM00862 6 79 4.3E-7 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS21600 e627a9a6a638ac66d85fa8053ffc7d4c 86 SUPERFAMILY SSF46894 2 79 1.96E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS21600 e627a9a6a638ac66d85fa8053ffc7d4c 86 Gene3D G3DSA:1.10.10.10 1 85 6.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21600 e627a9a6a638ac66d85fa8053ffc7d4c 86 Pfam PF00486 Transcriptional regulatory protein, C terminal 8 79 7.4E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 SUPERFAMILY SSF103473 25 445 3.53E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 432 1.7E-142 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 SUPERFAMILY SSF103661 466 498 1.57E-11 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 Gene3D G3DSA:1.20.1250.20 23 238 2.1E-22 T 28-03-2018 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 Pfam PF00083 Sugar (and other) transporter 29 449 9.8E-65 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 Gene3D G3DSA:1.20.1250.20 244 477 1.2E-27 T 28-03-2018 CO704_RS20550 1874c0866d6ae2ad4c3d204f8bf38fd4 501 Pfam PF08946 Osmosensory transporter coiled coil 455 500 4.1E-19 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.0E-89 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 Gene3D G3DSA:3.20.20.70 1 220 1.0E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 PIRSF PIRSF001461 1 225 8.3E-106 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.0E-96 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00855 6d8666fe305077d795a4ce4f78082294 225 SUPERFAMILY SSF51366 3 218 3.6E-75 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS15775 4a67d4c424860e05e27daf5582f25a72 333 SUPERFAMILY SSF53383 1 332 5.0E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS15775 4a67d4c424860e05e27daf5582f25a72 333 Pfam PF01212 Beta-eliminating lyase 3 283 8.1E-97 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CO704_RS15775 4a67d4c424860e05e27daf5582f25a72 333 Gene3D G3DSA:3.40.640.10 17 247 2.0E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS15775 4a67d4c424860e05e27daf5582f25a72 333 Gene3D G3DSA:3.90.1150.10 248 333 2.5E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS15775 4a67d4c424860e05e27daf5582f25a72 333 PIRSF PIRSF017617 1 333 3.4E-129 T 28-03-2018 IPR023603 Threonine aldolase CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 SUPERFAMILY SSF50331 237 356 8.99E-28 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 SMART SM00382 29 212 8.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 Gene3D G3DSA:2.40.50.140 289 341 2.7E-17 T 28-03-2018 CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 SUPERFAMILY SSF52540 4 242 1.23E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 Pfam PF00005 ABC transporter 21 162 3.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 Pfam PF08402 TOBE domain 278 348 2.2E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 Gene3D G3DSA:3.40.50.300 2 238 8.3E-68 T 28-03-2018 CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS00585 b61bf574cbf305ff593cc3267b2ea7e0 356 Gene3D G3DSA:2.40.50.100 240 288 3.9E-12 T 28-03-2018 CO704_RS07420 bccc6ca06b2c7e7e8576812a10821943 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.2E-68 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CO704_RS07420 bccc6ca06b2c7e7e8576812a10821943 193 Gene3D G3DSA:2.70.40.10 2 168 5.8E-44 T 28-03-2018 CO704_RS07420 bccc6ca06b2c7e7e8576812a10821943 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.24 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CO704_RS07420 bccc6ca06b2c7e7e8576812a10821943 193 SUPERFAMILY SSF51283 1 193 2.36E-60 T 28-03-2018 IPR029054 dUTPase-like CO704_RS07420 bccc6ca06b2c7e7e8576812a10821943 193 Pfam PF00692 dUTPase 79 185 7.6E-9 T 28-03-2018 IPR029054 dUTPase-like CO704_RS20305 eafdb98b6df4cbcbf10ba4f2e76369f6 76 Pfam PF11534 Hexameric tyrosine-coordinated heme protein (HTHP) 4 75 2.6E-36 T 28-03-2018 IPR021111 Hexameric tyrosine-coordinated heme protein (HTHP) CO704_RS05690 524ea9ebc3940b7fd851dc5c15811248 118 Gene3D G3DSA:3.40.30.10 1 116 1.1E-35 T 28-03-2018 CO704_RS05690 524ea9ebc3940b7fd851dc5c15811248 118 SUPERFAMILY SSF52833 1 115 2.36E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05690 524ea9ebc3940b7fd851dc5c15811248 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 8.2E-34 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CO704_RS05690 524ea9ebc3940b7fd851dc5c15811248 118 Pfam PF03960 ArsC family 5 114 2.3E-16 T 28-03-2018 IPR006660 Arsenate reductase-like CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 Pfam PF00480 ROK family 89 392 2.5E-93 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 Gene3D G3DSA:3.30.420.40 210 402 1.8E-47 T 28-03-2018 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 SUPERFAMILY SSF53067 88 393 2.33E-55 T 28-03-2018 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 Gene3D G3DSA:3.30.420.40 73 209 4.4E-19 T 28-03-2018 CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 SUPERFAMILY SSF46785 14 79 2.15E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17105 3d432b1121cbb29f3eb94e1ea909c841 406 Gene3D G3DSA:1.10.10.10 13 72 2.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 SUPERFAMILY SSF90123 7 323 1.26E-70 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 Pfam PF00664 ABC transporter transmembrane region 22 291 4.1E-36 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 Gene3D G3DSA:3.40.50.300 325 577 4.1E-65 T 28-03-2018 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 SUPERFAMILY SSF52540 334 572 4.24E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 Pfam PF00005 ABC transporter 352 500 9.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 Gene3D G3DSA:1.20.1560.10 1 324 8.4E-57 T 28-03-2018 CO704_RS18120 735f84cddd1aa44d424468d94bc07b0b 593 SMART SM00382 361 547 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09820 585e755f9023390d681cb0c2df988db4 302 SUPERFAMILY SSF52151 1 296 8.89E-57 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS09820 585e755f9023390d681cb0c2df988db4 302 Gene3D G3DSA:3.40.1090.10 2 258 5.7E-38 T 28-03-2018 CO704_RS09820 585e755f9023390d681cb0c2df988db4 302 Pfam PF01734 Patatin-like phospholipase 8 165 6.4E-23 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 SUPERFAMILY SSF47384 210 281 5.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 Gene3D G3DSA:1.10.287.130 216 280 2.4E-7 T 28-03-2018 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 Gene3D G3DSA:3.30.565.10 288 433 1.1E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 SMART SM00388 226 284 7.8E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 SUPERFAMILY SSF55874 283 432 1.44E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 2.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 2.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 2.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 2.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 432 2.6E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20615 d8d76760c6389c19d79a19bd516a87f8 433 SMART SM00387 325 433 1.9E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 Pfam PF01678 Diaminopimelate epimerase 152 266 6.8E-31 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.7E-34 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 Gene3D G3DSA:3.10.310.10 125 261 1.1E-49 T 28-03-2018 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 SUPERFAMILY SSF54506 2 273 1.02E-56 T 28-03-2018 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.622 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 9.3E-103 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CO704_RS23225 f0d2900fdbf41f0bd31831b50f008416 274 Gene3D G3DSA:3.10.310.10 1 124 1.2E-48 T 28-03-2018 CO704_RS08920 ce4ebebd5a6b46d9236b1731e67d7b5f 700 Pfam PF00593 TonB dependent receptor 241 692 2.3E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS08920 ce4ebebd5a6b46d9236b1731e67d7b5f 700 Gene3D G3DSA:2.170.130.10 30 163 9.7E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS08920 ce4ebebd5a6b46d9236b1731e67d7b5f 700 SUPERFAMILY SSF56935 51 693 1.54E-101 T 28-03-2018 CO704_RS08920 ce4ebebd5a6b46d9236b1731e67d7b5f 700 Gene3D G3DSA:2.40.170.20 171 698 5.7E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS08920 ce4ebebd5a6b46d9236b1731e67d7b5f 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 155 3.9E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 3.5E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-35 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 92 6.8E-40 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01115 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 Pfam PF00106 short chain dehydrogenase 8 193 3.2E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 Gene3D G3DSA:3.40.50.720 4 265 7.0E-51 T 28-03-2018 CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PIRSF PIRSF000126 1 265 5.6E-75 T 28-03-2018 CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12095 ac7ce37663dacff39f850f30631d8548 265 SUPERFAMILY SSF51735 3 230 2.43E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 Gene3D G3DSA:3.40.50.720 136 230 1.6E-13 T 28-03-2018 CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 190 1.5E-13 T 28-03-2018 CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 Gene3D G3DSA:3.40.50.720 2 135 6.0E-23 T 28-03-2018 CO704_RS11055 fcc66fa44f6e57876c3b6c3c11240786 256 SUPERFAMILY SSF51735 3 223 6.4E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07650 b5b4e284ec9f0ba5c285e2b0f8223049 354 Gene3D G3DSA:3.40.50.720 1 229 1.6E-54 T 28-03-2018 CO704_RS07650 b5b4e284ec9f0ba5c285e2b0f8223049 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 340 3.9E-155 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CO704_RS07650 b5b4e284ec9f0ba5c285e2b0f8223049 354 Gene3D G3DSA:3.90.25.10 230 336 1.7E-28 T 28-03-2018 CO704_RS07650 b5b4e284ec9f0ba5c285e2b0f8223049 354 SUPERFAMILY SSF51735 1 346 2.99E-91 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07650 b5b4e284ec9f0ba5c285e2b0f8223049 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.2E-93 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22440 4c067e6ae389b53b0e46936c620c3393 314 Pfam PF13407 Periplasmic binding protein domain 30 286 2.6E-57 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS22440 4c067e6ae389b53b0e46936c620c3393 314 Gene3D G3DSA:3.40.50.2300 28 133 2.1E-23 T 28-03-2018 CO704_RS22440 4c067e6ae389b53b0e46936c620c3393 314 SUPERFAMILY SSF53822 10 308 8.58E-80 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS22440 4c067e6ae389b53b0e46936c620c3393 314 Gene3D G3DSA:3.40.50.2300 134 312 2.5E-38 T 28-03-2018 CO704_RS23045 6a43ed148abcd2e7a5a143b563c9f6fd 483 PIRSF PIRSF006247 1 483 1.8E-186 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CO704_RS23045 6a43ed148abcd2e7a5a143b563c9f6fd 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 8.4E-130 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CO704_RS23045 6a43ed148abcd2e7a5a143b563c9f6fd 483 Pfam PF02386 Cation transport protein 37 477 4.4E-93 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 Gene3D G3DSA:3.40.50.10600 8 128 2.6E-26 T 28-03-2018 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 4.4E-43 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 4.4E-43 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 4.4E-43 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.4E-43 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 474 9.2E-48 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 Gene3D G3DSA:1.10.287.950 315 505 1.0E-42 T 28-03-2018 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 Gene3D G3DSA:1.10.287.950 207 314 5.0E-7 T 28-03-2018 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 SMART SM00283 259 506 3.0E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 SUPERFAMILY SSF58104 232 505 5.23E-63 T 28-03-2018 CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 SMART SM00086 80 121 6.6E-5 T 28-03-2018 IPR001610 PAC motif CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 2.7E-10 T 28-03-2018 IPR000014 PAS domain CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 SUPERFAMILY SSF55785 21 114 1.74E-23 T 28-03-2018 IPR000014 PAS domain CO704_RS20545 baff93daa4c79949789ca1f59619af68 506 Pfam PF08447 PAS fold 31 112 6.5E-14 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CO704_RS19645 09fb563dc1c29cb7992bfa91383ac09c 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 2.3E-135 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CO704_RS19645 09fb563dc1c29cb7992bfa91383ac09c 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CO704_RS19645 09fb563dc1c29cb7992bfa91383ac09c 414 Pfam PF01098 Cell cycle protein 47 402 9.2E-129 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CO704_RS19645 09fb563dc1c29cb7992bfa91383ac09c 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.154 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 Gene3D G3DSA:3.40.190.10 177 261 1.6E-19 T 28-03-2018 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 Gene3D G3DSA:1.10.10.10 1 84 7.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 SUPERFAMILY SSF53850 87 288 2.37E-48 T 28-03-2018 CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 Pfam PF03466 LysR substrate binding domain 86 286 2.4E-50 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 SUPERFAMILY SSF46785 2 109 2.18E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06940 4e86c09e855ab58a6b65f3e3139dfa0c 288 Gene3D G3DSA:3.40.190.10 87 176 1.6E-25 T 28-03-2018 CO704_RS23835 cf31c715bb0feb14eadec21126ed4691 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.77 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS23835 cf31c715bb0feb14eadec21126ed4691 213 Pfam PF00156 Phosphoribosyl transferase domain 48 161 6.1E-12 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS23835 cf31c715bb0feb14eadec21126ed4691 213 Gene3D G3DSA:3.40.50.2020 1 193 8.0E-49 T 28-03-2018 CO704_RS23835 cf31c715bb0feb14eadec21126ed4691 213 SUPERFAMILY SSF53271 2 208 2.27E-49 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS23835 cf31c715bb0feb14eadec21126ed4691 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.8E-71 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS18700 419a40835021bbca6d82b66efdb9fbca 170 SUPERFAMILY SSF55729 1 148 4.36E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS18700 419a40835021bbca6d82b66efdb9fbca 170 Gene3D G3DSA:3.40.630.30 1 155 2.3E-23 T 28-03-2018 CO704_RS18700 419a40835021bbca6d82b66efdb9fbca 170 Pfam PF00583 Acetyltransferase (GNAT) family 47 145 3.6E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 SUPERFAMILY SSF52540 11 243 9.35E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 Pfam PF00005 ABC transporter 26 181 3.1E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 5.4E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 SMART SM00382 35 229 3.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24170 4643eee8a6a0f202a31a445b16819842 257 Gene3D G3DSA:3.40.50.300 9 255 1.5E-62 T 28-03-2018 CO704_RS19575 3de22286bc261df6c992f00253909ea7 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 183 2.4E-63 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CO704_RS19575 3de22286bc261df6c992f00253909ea7 206 SUPERFAMILY SSF52540 1 191 1.16E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19575 3de22286bc261df6c992f00253909ea7 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.122 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CO704_RS19575 3de22286bc261df6c992f00253909ea7 206 Gene3D G3DSA:3.40.50.300 2 205 5.8E-43 T 28-03-2018 CO704_RS19575 3de22286bc261df6c992f00253909ea7 206 Pfam PF01121 Dephospho-CoA kinase 4 180 3.8E-72 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 5.7E-34 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 SUPERFAMILY SSF46992 3 86 2.62E-31 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-27 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.154 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS19895 56308f1fcdecd309938bb501d8f88f56 87 Gene3D G3DSA:1.20.58.110 1 87 2.3E-29 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 4.2E-78 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 SUPERFAMILY SSF56784 1 157 2.0E-38 T 28-03-2018 IPR023214 HAD-like domain CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 2.4E-24 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 3.0E-43 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Gene3D G3DSA:3.40.50.1000 1 164 2.3E-24 T 28-03-2018 IPR023214 HAD-like domain CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Gene3D G3DSA:3.30.230.40 165 253 1.5E-33 T 28-03-2018 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.326 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 SUPERFAMILY SSF54211 252 342 6.7E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 SUPERFAMILY SSF54211 167 251 2.66E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Pfam PF13242 HAD-hyrolase-like 103 146 2.2E-5 T 28-03-2018 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Gene3D G3DSA:3.30.230.40 255 355 1.9E-31 T 28-03-2018 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 8.4E-64 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 51.269 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CO704_RS07685 ad0a56d8d8caca8443741a34675f995d 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CO704_RS11935 5557b238449d5dd596f543491f0882aa 129 SMART SM00450 29 127 0.0044 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11935 5557b238449d5dd596f543491f0882aa 129 SUPERFAMILY SSF52821 22 126 7.6E-19 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11935 5557b238449d5dd596f543491f0882aa 129 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CO704_RS11935 5557b238449d5dd596f543491f0882aa 129 Pfam PF00581 Rhodanese-like domain 40 123 3.6E-7 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS11935 5557b238449d5dd596f543491f0882aa 129 Gene3D G3DSA:3.40.250.10 10 128 2.0E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS08960 0b592118be19269b31e90e0020aaff08 224 Gene3D G3DSA:1.10.3680.10 81 221 1.8E-15 T 28-03-2018 IPR029024 TerB-like CO704_RS08960 0b592118be19269b31e90e0020aaff08 224 Pfam PF04391 Protein of unknown function (DUF533) 38 214 5.3E-49 T 28-03-2018 IPR007486 Inner membrane protein YebE CO704_RS08960 0b592118be19269b31e90e0020aaff08 224 SUPERFAMILY SSF158682 107 218 4.58E-18 T 28-03-2018 CO704_RS06795 3bcce6f63c26677a616c14f0c8ecdbe8 151 PIRSF PIRSF028139 18 132 4.7E-40 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase CO704_RS06795 3bcce6f63c26677a616c14f0c8ecdbe8 151 Pfam PF08883 Dopa 4,5-dioxygenase family 28 126 1.5E-30 T 28-03-2018 IPR014980 Dopa 4,5-dioxygenase CO704_RS06795 3bcce6f63c26677a616c14f0c8ecdbe8 151 SUPERFAMILY SSF143410 21 126 3.79E-35 T 28-03-2018 IPR023389 DOPA-like domain CO704_RS06795 3bcce6f63c26677a616c14f0c8ecdbe8 151 Gene3D G3DSA:3.30.70.1240 20 128 1.3E-33 T 28-03-2018 IPR023389 DOPA-like domain CO704_RS22400 5bda4a60b8352b11989ed8a233750e6a 311 Pfam PF13407 Periplasmic binding protein domain 28 290 9.1E-57 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS22400 5bda4a60b8352b11989ed8a233750e6a 311 Gene3D G3DSA:3.40.50.2300 147 302 1.5E-38 T 28-03-2018 CO704_RS22400 5bda4a60b8352b11989ed8a233750e6a 311 Gene3D G3DSA:3.40.50.2300 28 146 2.6E-16 T 28-03-2018 CO704_RS22400 5bda4a60b8352b11989ed8a233750e6a 311 SUPERFAMILY SSF53822 28 311 2.02E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 Gene3D G3DSA:1.20.1250.20 3 231 7.1E-40 T 28-03-2018 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 Gene3D G3DSA:1.20.1250.20 232 463 2.6E-41 T 28-03-2018 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 SUPERFAMILY SSF103473 12 448 4.58E-80 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 Pfam PF00083 Sugar (and other) transporter 18 450 1.6E-138 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 447 4.2E-150 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 PRINTS PR00171 Sugar transporter signature 109 128 1.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 PRINTS PR00171 Sugar transporter signature 26 36 1.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 PRINTS PR00171 Sugar transporter signature 262 272 1.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 PRINTS PR00171 Sugar transporter signature 352 373 1.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS02835 ae738e50a5b61774f1c5f0f7ab45bc11 464 PRINTS PR00171 Sugar transporter signature 375 387 1.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS16820 b07dc2fa8085311bc94b7319c18d5ea8 208 Pfam PF11363 Protein of unknown function (DUF3164) 14 206 2.8E-76 T 28-03-2018 IPR021505 Bacteriophage B3, Orf6 CO704_RS22860 a85d572cb1d22afbb9fbffa261007103 196 Gene3D G3DSA:1.20.1590.10 5 194 7.0E-78 T 28-03-2018 IPR023381 YP001051499.1-like domain CO704_RS22860 a85d572cb1d22afbb9fbffa261007103 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 1.7E-82 T 28-03-2018 IPR007338 Protein of unknown function DUF416 CO704_RS14400 1b1b7686eed1e7eaa7f37b53bc3505c9 399 Pfam PF12704 MacB-like periplasmic core domain 27 208 1.4E-14 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS14400 1b1b7686eed1e7eaa7f37b53bc3505c9 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 1.6E-139 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CO704_RS14400 1b1b7686eed1e7eaa7f37b53bc3505c9 399 Pfam PF02687 FtsX-like permease family 296 392 1.4E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 5.2E-74 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.7E-39 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 4.5E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 Gene3D G3DSA:1.10.3130.10 1 134 7.7E-39 T 28-03-2018 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 Gene3D G3DSA:2.160.10.10 135 263 1.4E-26 T 28-03-2018 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 SMART SM00971 9 113 9.3E-64 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 PIRSF PIRSF000441 75 264 4.8E-58 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CO704_RS23695 e5552a7ea6069c16669c9d28a8fec508 271 SUPERFAMILY SSF51161 8 260 1.66E-65 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS20620 64d60495d87fd8adaa17fc2f2b17baa1 396 Gene3D G3DSA:3.40.30.10 221 396 3.9E-27 T 28-03-2018 CO704_RS20620 64d60495d87fd8adaa17fc2f2b17baa1 396 SUPERFAMILY SSF52833 249 390 2.39E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS20620 64d60495d87fd8adaa17fc2f2b17baa1 396 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 6 200 8.6E-14 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CO704_RS20620 64d60495d87fd8adaa17fc2f2b17baa1 396 Pfam PF00578 AhpC/TSA family 271 372 4.3E-12 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 Gene3D G3DSA:3.40.50.720 1 243 1.4E-62 T 28-03-2018 CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 SUPERFAMILY SSF51735 1 231 4.91E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.7E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 Pfam PF00106 short chain dehydrogenase 7 199 9.1E-58 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS06910 7b62373d8efe1a7f85900a6667e7b06d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24460 74bf6c4defe0dc4554b7e7219d8ade74 267 Gene3D G3DSA:3.40.50.300 2 251 1.2E-36 T 28-03-2018 CO704_RS24460 74bf6c4defe0dc4554b7e7219d8ade74 267 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 243 6.8E-57 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CO704_RS24460 74bf6c4defe0dc4554b7e7219d8ade74 267 SUPERFAMILY SSF52540 2 251 2.66E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24460 74bf6c4defe0dc4554b7e7219d8ade74 267 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 242 2.4E-39 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 9.0E-86 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.2E-11 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 Pfam PF02355 Protein export membrane protein 118 301 1.3E-68 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 3.1E-53 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 SUPERFAMILY SSF82866 79 303 4.45E-40 T 28-03-2018 CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 Gene3D G3DSA:1.20.1640.10 69 313 4.5E-32 T 28-03-2018 CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.022 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS18340 e8e9bc59a0be0f3852db88dfd51ab152 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CO704_RS16035 c49bf6a301c9273d895ba34483dfaa4b 320 Gene3D G3DSA:3.40.1030.10 101 320 4.8E-38 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS16035 c49bf6a301c9273d895ba34483dfaa4b 320 SUPERFAMILY SSF52418 74 318 1.73E-46 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS16035 c49bf6a301c9273d895ba34483dfaa4b 320 Gene3D G3DSA:1.20.970.10 4 100 3.2E-16 T 28-03-2018 CO704_RS16035 c49bf6a301c9273d895ba34483dfaa4b 320 SUPERFAMILY SSF47648 7 72 5.76E-14 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS16035 c49bf6a301c9273d895ba34483dfaa4b 320 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 2.1E-10 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 SUPERFAMILY SSF46785 22 60 7.91E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 Gene3D G3DSA:1.10.10.10 2 113 1.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 SUPERFAMILY SSF53850 122 561 4.16E-50 T 28-03-2018 CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 4.7E-40 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 303 2.8E-11 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 Gene3D G3DSA:3.40.190.10 258 348 8.2E-4 T 28-03-2018 CO704_RS18140 cec87fb3cf81ec583f9e51b05299e4f2 567 Gene3D G3DSA:3.90.76.10 130 257 2.3E-12 T 28-03-2018 CO704_RS16780 5a94358f457310fdfa06132d8e82ee3a 193 SUPERFAMILY SSF47413 18 80 1.65E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS16780 5a94358f457310fdfa06132d8e82ee3a 193 Gene3D G3DSA:1.10.260.40 19 153 2.2E-7 T 28-03-2018 CO704_RS16780 5a94358f457310fdfa06132d8e82ee3a 193 Gene3D G3DSA:1.10.10.10 154 183 0.038 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21365 e29e4e59083dd40679111f5026c5ad9f 48 Pfam PF08085 Entericidin EcnA/B family 23 43 4.3E-10 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 Gene3D G3DSA:1.20.1250.20 9 208 1.2E-25 T 28-03-2018 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 Pfam PF00854 POT family 89 446 4.3E-90 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 Gene3D G3DSA:1.20.1250.20 262 496 3.8E-19 T 28-03-2018 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 SUPERFAMILY SSF103473 257 489 1.07E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 SUPERFAMILY SSF103473 14 212 1.07E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 2.8E-138 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CO704_RS13390 e6f049df971fbc9f4b020184583f37c3 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.992 T 28-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 3.5E-35 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Gene3D G3DSA:3.30.230.10 217 330 3.4E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 SUPERFAMILY SSF54211 191 331 1.59E-34 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 SUPERFAMILY SSF118116 442 621 8.11E-40 T 28-03-2018 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 SMART SM01340 212 331 5.5E-53 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 1.8E-12 T 28-03-2018 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 SMART SM00853 446 581 4.9E-14 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Gene3D G3DSA:3.30.565.10 10 201 4.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Pfam PF08676 MutL C terminal dimerisation domain 443 575 4.9E-23 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 SUPERFAMILY SSF55874 1 201 1.7E-57 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 620 25.5 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CO704_RS20980 7c1d4696e19e4667da0ce41c8fcf6956 623 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.5E-105 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 SUPERFAMILY SSF46689 5 79 2.15E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 Gene3D G3DSA:1.10.10.10 1 81 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 79 8.3E-16 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 SUPERFAMILY SSF53697 96 277 7.19E-37 T 28-03-2018 CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 Pfam PF01380 SIS domain 124 252 5.1E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS22260 83cb68965445089e3fa5ccdbcb913f52 287 Gene3D G3DSA:3.40.50.10490 94 279 7.6E-32 T 28-03-2018 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 PIRSF PIRSF004846 1 257 3.0E-73 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 SUPERFAMILY SSF53850 27 255 2.74E-64 T 28-03-2018 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 Gene3D G3DSA:3.40.190.10 24 118 4.3E-17 T 28-03-2018 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 2.9E-43 T 28-03-2018 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 Gene3D G3DSA:3.40.190.10 119 217 4.9E-30 T 28-03-2018 CO704_RS21940 cd1cc25da7d21e371cd28d20558738fc 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 5.2E-74 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 PIRSF PIRSF002741 15 522 8.9E-68 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 447 1.9E-67 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 Gene3D G3DSA:3.10.105.10 305 496 3.5E-38 T 28-03-2018 CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 Gene3D G3DSA:3.90.76.10 72 180 4.1E-22 T 28-03-2018 CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 SUPERFAMILY SSF53850 49 524 2.71E-113 T 28-03-2018 CO704_RS20010 db917e45de94a50ae94001bac4f580fd 529 Gene3D G3DSA:3.40.190.10 181 304 4.6E-29 T 28-03-2018 CO704_RS12725 92c1801312037879523a955ac589d41c 630 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 15 630 30.797 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CO704_RS12725 92c1801312037879523a955ac589d41c 630 Pfam PF02705 K+ potassium transporter 25 551 4.1E-204 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CO704_RS20910 34570bfe81f4dd0f23077cce7a44b621 242 Pfam PF00326 Prolyl oligopeptidase family 49 229 3.8E-13 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS20910 34570bfe81f4dd0f23077cce7a44b621 242 SUPERFAMILY SSF53474 12 242 4.71E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS20910 34570bfe81f4dd0f23077cce7a44b621 242 Gene3D G3DSA:3.40.50.1820 1 242 2.5E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 Gene3D G3DSA:1.10.10.10 1 89 3.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 Pfam PF03466 LysR substrate binding domain 92 292 7.9E-44 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 SUPERFAMILY SSF53850 93 292 6.98E-42 T 28-03-2018 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 Gene3D G3DSA:3.40.190.10 184 266 8.7E-24 T 28-03-2018 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 Gene3D G3DSA:3.40.190.10 93 183 1.6E-21 T 28-03-2018 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 SUPERFAMILY SSF46785 3 84 2.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03290 a46588c11468b4bf268fce366aabdd80 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Gene3D G3DSA:3.30.70.260 385 464 1.8E-18 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 SUPERFAMILY SSF55021 383 476 4.23E-22 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Pfam PF00696 Amino acid kinase family 2 284 3.3E-45 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.5E-31 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.2E-151 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 PIRSF PIRSF000727 1 818 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Gene3D G3DSA:3.40.50.720 465 635 1.2E-29 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Gene3D G3DSA:3.30.70.260 291 384 5.4E-26 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Gene3D G3DSA:3.30.360.10 636 794 4.3E-55 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Pfam PF00742 Homoserine dehydrogenase 614 811 4.9E-49 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 SUPERFAMILY SSF55347 614 798 4.64E-52 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Pfam PF13840 ACT domain 393 453 2.9E-9 T 28-03-2018 IPR027795 GATS-like ACT domain CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Pfam PF01842 ACT domain 324 376 3.8E-9 T 28-03-2018 IPR002912 ACT domain CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 SUPERFAMILY SSF55021 303 381 3.17E-23 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 SUPERFAMILY SSF53633 1 297 1.11E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 Gene3D G3DSA:3.40.1160.10 1 290 1.1E-64 T 28-03-2018 CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 SUPERFAMILY SSF51735 464 636 1.71E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19965 dad6b48763c731de5df8fc8ce3e2c9d7 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 SUPERFAMILY SSF56712 1 606 1.96E-188 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 SMART SM00493 1 124 2.3E-32 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Gene3D G3DSA:2.70.20.10 364 479 1.1E-23 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 5.3E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 5.3E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 5.3E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 5.3E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 5.3E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Pfam PF01131 DNA topoisomerase 158 593 1.1E-112 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 SMART SM00436 128 223 1.2E-36 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Gene3D G3DSA:3.40.50.140 1 156 2.0E-41 T 28-03-2018 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Gene3D G3DSA:1.10.460.10 157 358 5.0E-40 T 28-03-2018 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Gene3D G3DSA:1.10.460.10 480 659 1.1E-24 T 28-03-2018 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Pfam PF01751 Toprim domain 3 135 3.8E-17 T 28-03-2018 IPR006171 TOPRIM domain CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 646 2.9E-291 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 644 68.446 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CO704_RS14005 aadbf9a873c48fcd637a930c8c753693 664 SMART SM00437 280 558 3.4E-105 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CO704_RS15525 a6ff3149f15abfbff701434b68b07d8f 238 Pfam PF04288 MukE-like family 10 225 2.9E-126 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CO704_RS15525 a6ff3149f15abfbff701434b68b07d8f 238 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 236 49.566 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CO704_RS08605 56b97ad9fc2d97428b0473d260193b79 146 SUPERFAMILY SSF53955 1 146 3.33E-51 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS08605 56b97ad9fc2d97428b0473d260193b79 146 Pfam PF00959 Phage lysozyme 28 138 4.4E-22 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CO704_RS08605 56b97ad9fc2d97428b0473d260193b79 146 Gene3D G3DSA:1.10.530.40 1 146 9.4E-56 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 CO704_RS16470 c318e1898a559497c12e2b3621056c72 252 Pfam PF08241 Methyltransferase domain 48 139 6.5E-23 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CO704_RS16470 c318e1898a559497c12e2b3621056c72 252 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 251 28.902 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CO704_RS16470 c318e1898a559497c12e2b3621056c72 252 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 250 6.7E-68 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CO704_RS16470 c318e1898a559497c12e2b3621056c72 252 SUPERFAMILY SSF53335 11 179 6.29E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS16470 c318e1898a559497c12e2b3621056c72 252 Gene3D G3DSA:3.40.50.150 2 231 7.4E-36 T 28-03-2018 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.544 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 PIRSF PIRSF035805 1 200 2.3E-56 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 Gene3D G3DSA:3.40.50.300 2 141 3.1E-43 T 28-03-2018 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 Gene3D G3DSA:3.30.60.20 142 192 7.3E-19 T 28-03-2018 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 SUPERFAMILY SSF57716 142 192 1.89E-17 T 28-03-2018 CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 SUPERFAMILY SSF52540 1 141 1.44E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09845 21467c3b4e25da614689169f6b2b2013 201 Pfam PF00265 Thymidine kinase 2 186 1.0E-62 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 378 444 8.6E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 454 6.8E-156 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Gene3D G3DSA:2.40.10.10 141 258 2.6E-39 T 28-03-2018 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Gene3D G3DSA:2.30.42.10 369 456 5.4E-12 T 28-03-2018 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 8.1E-30 T 28-03-2018 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Pfam PF13180 PDZ domain 288 359 5.4E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Gene3D G3DSA:2.30.42.10 266 368 8.3E-26 T 28-03-2018 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 5.0E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 SUPERFAMILY SSF50156 226 351 5.39E-23 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 SUPERFAMILY SSF50494 39 264 2.25E-62 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 Gene3D G3DSA:2.40.10.10 29 140 2.8E-31 T 28-03-2018 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 SMART SM00228 268 350 1.6E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 SMART SM00228 375 448 4.9E-5 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS01525 4c341a8c984a5987313c107a0e852172 456 SUPERFAMILY SSF50156 385 455 1.17E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 Gene3D G3DSA:2.70.70.10 280 436 2.8E-44 T 28-03-2018 CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 SUPERFAMILY SSF51261 165 408 4.01E-70 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 8.7E-7 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 SMART SM00257 98 143 7.4E-5 T 28-03-2018 IPR018392 LysM domain CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 Pfam PF04225 Opacity-associated protein A LysM-like domain 97 172 4.7E-7 T 28-03-2018 IPR007340 Opacity-associated protein A CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 Pfam PF01551 Peptidase family M23 313 407 1.6E-33 T 28-03-2018 IPR016047 Peptidase M23 CO704_RS08885 594d2bbc1f30454554ee5abee65dff08 440 Gene3D G3DSA:3.10.350.10 92 149 1.1E-5 T 28-03-2018 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 SMART SM00421 135 192 2.2E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 SUPERFAMILY SSF52172 2 125 9.39E-27 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS02010 097511865b202962ee1170805dd0c51f 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 5.7E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 SMART SM00448 2 112 3.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 SUPERFAMILY SSF46894 128 192 3.4E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 Gene3D G3DSA:3.40.50.2300 1 123 3.2E-27 T 28-03-2018 CO704_RS02010 097511865b202962ee1170805dd0c51f 196 Gene3D G3DSA:1.10.10.10 124 195 4.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 SUPERFAMILY SSF56059 497 614 9.71E-74 T 28-03-2018 CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 SUPERFAMILY SSF56059 214 379 9.71E-74 T 28-03-2018 CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 Pfam PF05257 CHAP domain 52 149 5.3E-12 T 28-03-2018 IPR007921 CHAP domain CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 SUPERFAMILY SSF52440 380 510 2.88E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 252 615 1.3E-62 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CO704_RS02700 c914826daff5eac74e1f3d7062cf9d36 620 SUPERFAMILY SSF54001 10 197 3.14E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.2E-97 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Gene3D G3DSA:3.40.50.300 313 490 5.9E-30 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Gene3D G3DSA:2.30.130.40 1 118 9.6E-32 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.496 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 SUPERFAMILY SSF54211 595 772 4.55E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Gene3D G3DSA:3.30.230.10 585 772 1.9E-70 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.0E-43 T 28-03-2018 IPR003111 Lon, substrate-binding domain CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 SMART SM00382 348 492 4.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Gene3D G3DSA:1.10.8.60 491 584 1.8E-33 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 3.2E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 3.2E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 3.2E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 3.2E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 3.2E-57 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 SUPERFAMILY SSF52540 313 587 1.14E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 Gene3D G3DSA:1.10.4060.10 122 211 5.0E-31 T 28-03-2018 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 SUPERFAMILY SSF88697 10 201 2.46E-52 T 28-03-2018 IPR015947 PUA-like domain CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 PIRSF PIRSF001174 1 775 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CO704_RS18170 0c415a9c9411844e48c37ed40d45e5db 784 SMART SM00464 10 202 1.1E-88 T 28-03-2018 IPR003111 Lon, substrate-binding domain CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 SUPERFAMILY SSF52518 59 469 1.64E-142 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 105 294 3.5E-9 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 Gene3D G3DSA:3.40.50.970 472 706 9.0E-66 T 28-03-2018 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 PIRSF PIRSF000156 1 887 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 Gene3D G3DSA:3.40.50.920 707 887 1.1E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 SUPERFAMILY SSF52518 474 701 9.18E-98 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 SUPERFAMILY SSF52922 702 885 9.6E-63 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CO704_RS19525 d2b9e167d8f3e7618a1fc95a87cd8724 887 Gene3D G3DSA:3.40.50.970 57 471 8.6E-83 T 28-03-2018 CO704_RS03975 9474f6be215d7fe95408d981a6f9971b 78 Gene3D G3DSA:3.40.30.10 1 77 2.8E-12 T 28-03-2018 CO704_RS03975 9474f6be215d7fe95408d981a6f9971b 78 Pfam PF00462 Glutaredoxin 3 56 4.8E-14 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CO704_RS03975 9474f6be215d7fe95408d981a6f9971b 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 2.4E-33 T 28-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 CO704_RS03975 9474f6be215d7fe95408d981a6f9971b 78 SUPERFAMILY SSF52833 1 71 6.69E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS25140 10e465b83149602e5f9e4cd03c8d9df2 234 SUPERFAMILY SSF51735 8 215 9.95E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS25140 10e465b83149602e5f9e4cd03c8d9df2 234 Pfam PF13460 NAD(P)H-binding 13 212 5.8E-17 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS25140 10e465b83149602e5f9e4cd03c8d9df2 234 Gene3D G3DSA:3.40.50.720 5 231 1.3E-19 T 28-03-2018 CO704_RS16185 7b99f472d823cb0f2c415b5739a0918f 341 SUPERFAMILY SSF53955 201 335 3.1E-19 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS16185 7b99f472d823cb0f2c415b5739a0918f 341 Gene3D G3DSA:1.10.530.10 194 341 1.9E-22 T 28-03-2018 CO704_RS16185 7b99f472d823cb0f2c415b5739a0918f 341 Pfam PF01464 Transglycosylase SLT domain 212 316 5.6E-13 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Gene3D G3DSA:2.30.30.100 272 318 1.2E-12 T 28-03-2018 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 SUPERFAMILY SSF46785 6 60 4.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Gene3D G3DSA:1.10.10.10 2 64 5.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.207 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 5.5E-79 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Pfam PF02237 Biotin protein ligase C terminal domain 274 317 5.9E-8 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.9E-24 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 SUPERFAMILY SSF55681 73 268 2.58E-58 T 28-03-2018 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Pfam PF08279 HTH domain 10 58 7.8E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 75 3.5E-27 T 28-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 Gene3D G3DSA:3.30.930.10 65 270 7.0E-60 T 28-03-2018 CO704_RS23005 dc4fe8ee2c7da8a8aecc621bb3ae3c3e 320 SUPERFAMILY SSF50037 271 317 5.95E-10 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CO704_RS15565 7f3d6d85e6279df6bb13b4ce2eaf3caf 327 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 321 5.6E-114 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CO704_RS15565 7f3d6d85e6279df6bb13b4ce2eaf3caf 327 Gene3D G3DSA:3.40.50.300 32 300 3.8E-8 T 28-03-2018 CO704_RS15565 7f3d6d85e6279df6bb13b4ce2eaf3caf 327 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 315 4.9E-107 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CO704_RS15565 7f3d6d85e6279df6bb13b4ce2eaf3caf 327 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 327 41.106 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CO704_RS15565 7f3d6d85e6279df6bb13b4ce2eaf3caf 327 SUPERFAMILY SSF52540 46 163 2.02E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Pfam PF08497 Radical SAM N-terminal 29 380 2.3E-145 T 28-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 SMART SM00729 377 627 8.7E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Gene3D G3DSA:3.20.20.70 296 714 1.2E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 SUPERFAMILY SSF102114 371 441 6.8E-10 T 28-03-2018 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 SUPERFAMILY SSF102114 471 646 6.8E-10 T 28-03-2018 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 381 401 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Pfam PF04055 Radical SAM superfamily 381 586 2.6E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 645 1.1E-265 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 647 50.715 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Pfam PF11842 Domain of unknown function (DUF3362) 595 701 2.5E-44 T 28-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CO704_RS02510 a81061b1cb699d7429169da5a55bf151 722 Gene3D G3DSA:3.40.50.280 140 214 0.0091 T 28-03-2018 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 SMART SM00448 2 114 5.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 SUPERFAMILY SSF52172 1 171 5.55E-30 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 Gene3D G3DSA:1.10.10.10 126 206 2.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 Gene3D G3DSA:3.40.50.2300 1 125 3.0E-28 T 28-03-2018 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 2.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 2.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 2.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12995 3a53c55ce11306edd629f3eac9ba6a57 207 SMART SM00421 144 201 1.3E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 Gene3D G3DSA:3.40.190.10 176 264 1.1E-30 T 28-03-2018 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 Gene3D G3DSA:1.10.10.10 1 82 3.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 SUPERFAMILY SSF46785 1 85 8.02E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 Pfam PF03466 LysR substrate binding domain 88 293 6.2E-56 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 SUPERFAMILY SSF53850 89 295 1.13E-48 T 28-03-2018 CO704_RS23510 3090424835e34b333857e0abd391fd5f 305 Gene3D G3DSA:3.40.190.10 87 175 7.8E-24 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Gene3D G3DSA:2.40.50.100 1153 1213 1.5E-14 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 18.962 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.7E-89 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.2E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 SMART SM00663 235 514 1.1E-184 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.6E-26 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 SUPERFAMILY SSF64484 1133 1363 0.0 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Gene3D G3DSA:2.40.50.100 1022 1126 1.5E-12 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Gene3D G3DSA:2.40.50.100 907 1021 3.1E-27 T 28-03-2018 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS22930 6efb93d08286603dd3463b7a568a6668 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 5.0E-77 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 Gene3D G3DSA:3.40.50.720 1 159 9.3E-34 T 28-03-2018 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 Gene3D G3DSA:1.10.3730.10 160 269 2.5E-42 T 28-03-2018 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 3.8E-37 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 3.0E-23 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.137 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 SUPERFAMILY SSF51735 3 160 4.07E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 265 5.1E-91 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 SUPERFAMILY SSF48179 162 268 2.04E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS18475 e4fd34afe2a6b1c49a1d24948221a99a 269 PIRSF PIRSF000193 2 269 4.2E-97 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 Pfam PF00717 Peptidase S24-like 57 121 1.1E-11 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 Gene3D G3DSA:2.10.109.10 20 138 4.4E-23 T 28-03-2018 CO704_RS10570 f196f46803666d8c6b89020d2f7ad1b0 139 SUPERFAMILY SSF51306 15 135 7.67E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS13170 42bba14e159f971322a9343b5c0b8182 187 SMART SM00463 85 169 8.6E-13 T 28-03-2018 IPR002625 Smr domain CO704_RS13170 42bba14e159f971322a9343b5c0b8182 187 Pfam PF01713 Smr domain 89 169 3.8E-16 T 28-03-2018 IPR002625 Smr domain CO704_RS13170 42bba14e159f971322a9343b5c0b8182 187 SUPERFAMILY SSF160443 87 169 2.75E-9 T 28-03-2018 IPR002625 Smr domain CO704_RS18200 0f277515c79670666b0fcbca8ed68d0b 491 SUPERFAMILY SSF103473 14 403 3.27E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18200 0f277515c79670666b0fcbca8ed68d0b 491 Gene3D G3DSA:1.20.1250.20 1 200 5.4E-22 T 28-03-2018 CO704_RS18200 0f277515c79670666b0fcbca8ed68d0b 491 Gene3D G3DSA:1.20.1250.20 208 408 1.3E-17 T 28-03-2018 CO704_RS18200 0f277515c79670666b0fcbca8ed68d0b 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 6.6E-121 T 28-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 CO704_RS18200 0f277515c79670666b0fcbca8ed68d0b 491 Pfam PF07690 Major Facilitator Superfamily 17 366 1.3E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS18090 d6a74d42ba308bf8df39153e822ac017 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 2.7E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS18090 d6a74d42ba308bf8df39153e822ac017 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 6 72 3.3E-13 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS18090 d6a74d42ba308bf8df39153e822ac017 103 Gene3D G3DSA:1.10.10.10 2 103 1.2E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18090 d6a74d42ba308bf8df39153e822ac017 103 SUPERFAMILY SSF46767 5 87 3.14E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CO704_RS01555 efeb150d07909d8b912d4ad209d24b36 167 Gene3D G3DSA:2.30.30.220 10 107 4.4E-42 T 28-03-2018 IPR007481 Stringent starvation protein B CO704_RS01555 efeb150d07909d8b912d4ad209d24b36 167 Pfam PF04386 Stringent starvation protein B 9 167 3.8E-44 T 28-03-2018 IPR007481 Stringent starvation protein B CO704_RS01555 efeb150d07909d8b912d4ad209d24b36 167 SUPERFAMILY SSF101738 3 120 4.97E-49 T 28-03-2018 IPR007481 Stringent starvation protein B CO704_RS01555 efeb150d07909d8b912d4ad209d24b36 167 PIRSF PIRSF005276 3 167 1.2E-60 T 28-03-2018 IPR007481 Stringent starvation protein B CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 SUPERFAMILY SSF51306 109 240 6.28E-22 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 Pfam PF00717 Peptidase S24-like 159 226 2.2E-11 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 Pfam PF01381 Helix-turn-helix 33 72 1.5E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 SMART SM00530 14 73 1.4E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 Gene3D G3DSA:2.10.109.10 116 244 5.2E-22 T 28-03-2018 CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 SUPERFAMILY SSF47413 32 76 3.66E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS04640 12550b8eb4e7555f37451ea5253a30b6 248 Gene3D G3DSA:1.10.260.40 1 80 3.1E-10 T 28-03-2018 CO704_RS04290 e25a929457e37c005a7ed30fee27ab25 232 Pfam PF11726 Inovirus Gp2 38 222 5.7E-55 T 28-03-2018 CO704_RS10350 9aaadb62a244cd417baf0ad2582e6b2f 254 Gene3D G3DSA:1.20.144.10 18 251 1.1E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10350 9aaadb62a244cd417baf0ad2582e6b2f 254 SMART SM00014 76 227 2.8E-40 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10350 9aaadb62a244cd417baf0ad2582e6b2f 254 SUPERFAMILY SSF48317 145 242 1.27E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10350 9aaadb62a244cd417baf0ad2582e6b2f 254 SUPERFAMILY SSF48317 17 113 1.27E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10350 9aaadb62a244cd417baf0ad2582e6b2f 254 Pfam PF01569 PAP2 superfamily 81 232 2.0E-33 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Pfam PF01479 S4 domain 97 143 5.7E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Gene3D G3DSA:1.10.1050.10 145 206 1.9E-17 T 28-03-2018 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Gene3D G3DSA:1.10.1050.10 1 101 2.4E-41 T 28-03-2018 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 SMART SM00363 96 160 2.6E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-87 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.7E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.321 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 SMART SM01390 3 95 1.3E-49 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 SUPERFAMILY SSF55174 3 206 9.42E-73 T 28-03-2018 CO704_RS01215 afe4d75ae1352f046fe2f56a95dd7826 206 Gene3D G3DSA:3.10.290.10 102 144 1.5E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 236 250 5.3E-23 T 28-03-2018 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 341 365 5.3E-23 T 28-03-2018 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 226 5.3E-23 T 28-03-2018 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 317 5.3E-23 T 28-03-2018 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 Pfam PF12161 HsdM N-terminal domain 13 174 7.8E-20 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 Pfam PF02384 N-6 DNA Methylase 186 490 1.7E-109 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 SUPERFAMILY SSF53335 89 528 1.03E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 SUPERFAMILY SSF53335 11 50 1.03E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 Gene3D G3DSA:3.40.50.150 208 484 5.7E-74 T 28-03-2018 CO704_RS02140 e4e8917ef6d6b069a9b4e977e40dbdad 535 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 11 505 1.0E-138 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 9 335 4.8E-69 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 8.0E-23 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 8.0E-23 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 21 37 8.0E-23 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 8.0E-23 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 Gene3D G3DSA:1.10.240.10 209 331 8.3E-29 T 28-03-2018 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 SUPERFAMILY SSF52374 10 335 9.86E-78 T 28-03-2018 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 Pfam PF00579 tRNA synthetases class I (W and Y) 10 290 1.4E-53 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 Gene3D G3DSA:3.40.50.620 7 208 8.2E-59 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS03780 1cda9858a5d81d1033bd94f8de34454f 339 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS18330 be832f0e94e70116249918ef922cc881 233 SUPERFAMILY SSF46785 5 62 8.17E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18330 be832f0e94e70116249918ef922cc881 233 Pfam PF08279 HTH domain 7 60 6.4E-17 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CO704_RS18330 be832f0e94e70116249918ef922cc881 233 Pfam PF13280 WYL domain 138 222 9.1E-16 T 28-03-2018 IPR026881 WYL domain CO704_RS18330 be832f0e94e70116249918ef922cc881 233 Gene3D G3DSA:1.10.10.10 1 64 1.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23730 d2db88482907e01b90edceca5d5f96d4 311 SUPERFAMILY SSF88713 24 238 3.89E-72 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS23730 d2db88482907e01b90edceca5d5f96d4 311 Gene3D G3DSA:3.20.20.370 18 241 2.0E-80 T 28-03-2018 CO704_RS23730 d2db88482907e01b90edceca5d5f96d4 311 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 3.4E-76 T 28-03-2018 IPR006837 Divergent polysaccharide deacetylase CO704_RS14920 2f087bde5dbab91f36c00a7c52b8b93a 115 Pfam PF11756 Nitrous oxide-stimulated promoter 4 104 2.5E-38 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA CO704_RS14920 2f087bde5dbab91f36c00a7c52b8b93a 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 6.0E-37 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 Gene3D G3DSA:2.170.130.10 28 165 1.2E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 158 3.1E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 Pfam PF00593 TonB dependent receptor 235 712 1.2E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 Gene3D G3DSA:2.40.170.20 166 714 2.2E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS22205 7c6e918e6aa040634509ea57e01a54d5 714 SUPERFAMILY SSF56935 38 714 1.5E-96 T 28-03-2018 CO704_RS14060 49ec1c53718ac5b483e618ee2de7e2a3 296 SUPERFAMILY SSF74650 8 274 5.34E-64 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS14060 49ec1c53718ac5b483e618ee2de7e2a3 296 PIRSF PIRSF016020 9 296 3.6E-54 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CO704_RS14060 49ec1c53718ac5b483e618ee2de7e2a3 296 Gene3D G3DSA:2.70.98.10 1 295 6.9E-65 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS14060 49ec1c53718ac5b483e618ee2de7e2a3 296 Pfam PF01263 Aldose 1-epimerase 27 272 3.8E-42 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 SUPERFAMILY SSF52540 79 283 1.92E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 103 264 8.8E-35 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 Gene3D G3DSA:3.40.50.300 231 285 1.2E-5 T 28-03-2018 CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 73 286 2.9E-93 T 28-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 Gene3D G3DSA:3.40.50.300 102 230 8.7E-14 T 28-03-2018 CO704_RS24230 7e6fc06d40bb0a2aa6d4061bac9a3c72 287 PIRSF PIRSF005624 67 287 2.4E-93 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Pfam PF00694 Aconitase C-terminal domain 691 818 3.9E-49 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 SUPERFAMILY SSF52016 630 890 3.14E-89 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 217 232 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 431 442 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 279 292 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 293 306 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 372 386 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 146 159 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 203 216 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 493 506 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 PRINTS PR00415 Aconitase family signature 170 178 5.2E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Gene3D G3DSA:3.30.499.10 29 239 2.0E-73 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Gene3D G3DSA:3.20.19.10 652 891 4.7E-94 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 1.3E-181 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 SUPERFAMILY SSF53732 10 626 8.11E-224 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Gene3D G3DSA:3.30.499.10 372 576 7.0E-63 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS10340 6f7e58419aec15f0f8e14e73cc331a3b 891 Gene3D G3DSA:3.40.1060.10 240 371 2.3E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS04770 0a9a08b1f3923ab43149d7b9107cdc66 210 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 191 2.2E-12 T 28-03-2018 CO704_RS04770 0a9a08b1f3923ab43149d7b9107cdc66 210 Gene3D G3DSA:3.40.50.1000 5 195 6.7E-6 T 28-03-2018 IPR023214 HAD-like domain CO704_RS04770 0a9a08b1f3923ab43149d7b9107cdc66 210 SUPERFAMILY SSF56784 5 156 7.47E-9 T 28-03-2018 IPR023214 HAD-like domain CO704_RS04770 0a9a08b1f3923ab43149d7b9107cdc66 210 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 3 210 1.5E-115 T 28-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CO704_RS15955 f678afe9f3c6a2ccf6180f2baca5c317 527 Gene3D G3DSA:3.40.720.10 209 488 1.1E-15 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS15955 f678afe9f3c6a2ccf6180f2baca5c317 527 SUPERFAMILY SSF53649 219 486 1.09E-16 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS15955 f678afe9f3c6a2ccf6180f2baca5c317 527 Pfam PF00884 Sulfatase 217 482 6.7E-37 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS21205 b8b5210c33f77e70db39a82370f125fd 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 4.4E-122 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 CO704_RS21205 b8b5210c33f77e70db39a82370f125fd 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 7.4E-156 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 CO704_RS01230 7d23c7cffc3e0aac5905ce3d03a49a00 123 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 2.7E-21 T 28-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CO704_RS21985 ae6d62e2062fb877ae63e600ab2657a7 183 SUPERFAMILY SSF50249 4 168 1.3E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS21985 ae6d62e2062fb877ae63e600ab2657a7 183 Gene3D G3DSA:2.40.50.140 1 118 2.5E-42 T 28-03-2018 CO704_RS21985 ae6d62e2062fb877ae63e600ab2657a7 183 Pfam PF00436 Single-strand binding protein family 6 112 8.0E-38 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CO704_RS21985 ae6d62e2062fb877ae63e600ab2657a7 183 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 36.518 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CO704_RS21985 ae6d62e2062fb877ae63e600ab2657a7 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 168 6.0E-51 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Pfam PF07338 Protein of unknown function (DUF1471) 118 174 4.7E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 4.2E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.6E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 SUPERFAMILY SSF159871 107 177 1.19E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 SUPERFAMILY SSF159871 4 94 1.2E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 PIRSF PIRSF014774 1 314 2.8E-175 T 28-03-2018 IPR025539 YdgH protein CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 SUPERFAMILY SSF159871 239 314 2.75E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Gene3D G3DSA:3.30.1660.10 247 314 4.4E-20 T 28-03-2018 IPR025543 Dodecin-like CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Gene3D G3DSA:3.30.1660.10 106 174 4.6E-17 T 28-03-2018 IPR025543 Dodecin-like CO704_RS13210 61dfa2021d5fa93f5e9001b7a181e092 314 Gene3D G3DSA:3.30.1660.10 22 90 8.9E-17 T 28-03-2018 IPR025543 Dodecin-like CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 PIRSF PIRSF002211 1 59 2.2E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.368 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 1.0E-19 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.2E-27 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 SUPERFAMILY SSF55129 3 59 1.12E-21 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CO704_RS01185 f7cb046e1297b4c762d24e56ceedc7f1 59 Gene3D G3DSA:3.30.1390.20 5 59 2.1E-24 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 5.4E-61 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 Gene3D G3DSA:2.30.30.240 102 177 2.0E-22 T 28-03-2018 CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 SUPERFAMILY SSF50447 13 99 8.83E-25 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 Pfam PF05239 PRC-barrel domain 105 177 2.9E-9 T 28-03-2018 IPR027275 PRC-barrel domain CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 SUPERFAMILY SSF50346 106 182 7.06E-20 T 28-03-2018 IPR011033 PRC-barrel-like CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 Pfam PF01782 RimM N-terminal domain 16 96 3.7E-27 T 28-03-2018 IPR002676 RimM protein GO:0006364 CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.597 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CO704_RS04400 9e86da424a278fff2b1e27d5b3151632 182 Gene3D G3DSA:2.40.30.60 12 100 1.8E-27 T 28-03-2018 IPR002676 RimM protein GO:0006364 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 PIRSF PIRSF000478 1 439 8.7E-154 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.1E-24 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Gene3D G3DSA:3.40.1030.10 69 342 9.4E-83 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.1E-167 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.048 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 SUPERFAMILY SSF54680 337 439 4.05E-32 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 SUPERFAMILY SSF47648 3 70 1.03E-20 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Gene3D G3DSA:3.90.1170.30 343 429 7.8E-29 T 28-03-2018 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 SMART SM00941 350 424 2.6E-29 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 SUPERFAMILY SSF52418 74 334 2.62E-88 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 6.0E-18 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 1.5E-52 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 Gene3D G3DSA:1.20.970.10 3 67 2.4E-20 T 28-03-2018 CO704_RS20100 eae4ec281edf09a525e9e09c0d6854f6 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.6E-235 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 SUPERFAMILY SSF103473 251 449 1.31E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 SUPERFAMILY SSF103473 7 198 1.31E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 Gene3D G3DSA:1.20.1250.20 261 456 5.8E-25 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 Gene3D G3DSA:1.20.1250.20 11 203 2.6E-31 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 Pfam PF07690 Major Facilitator Superfamily 21 412 3.4E-55 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.8E-8 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.8E-8 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.8E-8 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.8E-8 T 28-03-2018 CO704_RS09060 264dc75d9a2a62dbc117609d9383417c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.8E-8 T 28-03-2018 CO704_RS11430 7d6a17d489f98e0ea8977c7d0c5146cd 186 Pfam PF02469 Fasciclin domain 50 185 1.4E-31 T 28-03-2018 IPR000782 FAS1 domain CO704_RS11430 7d6a17d489f98e0ea8977c7d0c5146cd 186 SUPERFAMILY SSF82153 39 185 1.44E-37 T 28-03-2018 IPR000782 FAS1 domain CO704_RS11430 7d6a17d489f98e0ea8977c7d0c5146cd 186 Gene3D G3DSA:2.30.180.10 37 186 1.4E-35 T 28-03-2018 IPR000782 FAS1 domain CO704_RS11430 7d6a17d489f98e0ea8977c7d0c5146cd 186 SMART SM00554 74 186 1.2E-23 T 28-03-2018 IPR000782 FAS1 domain CO704_RS24650 a22991ee486745a83151c2636cb95248 221 SUPERFAMILY SSF56784 3 212 1.14E-45 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24650 a22991ee486745a83151c2636cb95248 221 Gene3D G3DSA:3.40.50.1000 76 218 6.1E-21 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24650 a22991ee486745a83151c2636cb95248 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 2.0E-22 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24650 a22991ee486745a83151c2636cb95248 221 Gene3D G3DSA:3.40.50.1000 1 30 0.04 T 28-03-2018 IPR023214 HAD-like domain CO704_RS24650 a22991ee486745a83151c2636cb95248 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 7 183 2.2E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS24650 a22991ee486745a83151c2636cb95248 221 Gene3D G3DSA:1.10.150.240 31 75 1.6E-16 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 SUPERFAMILY SSF49354 50 182 5.76E-34 T 28-03-2018 IPR008962 PapD-like CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 PRINTS PR00969 Pili chaperone signature 126 143 2.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 PRINTS PR00969 Pili chaperone signature 54 63 2.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 PRINTS PR00969 Pili chaperone signature 98 119 2.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 PRINTS PR00969 Pili chaperone signature 199 214 2.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 PRINTS PR00969 Pili chaperone signature 164 179 2.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 Gene3D G3DSA:2.60.40.10 54 180 3.9E-29 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 125 142 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 204 259 8.2E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 Gene3D G3DSA:2.60.40.10 184 266 2.2E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 SUPERFAMILY SSF49584 183 261 3.66E-22 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS17795 06ebf04a7b8ef16b80a60b371c594611 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 54 182 2.6E-31 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CO704_RS13950 d51a45d47c0f0ad81e0ce8710485face 222 Pfam PF09335 SNARE associated Golgi protein 65 181 7.0E-22 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 7.8E-190 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 Gene3D G3DSA:3.40.605.10 1 237 3.3E-44 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 Pfam PF00171 Aldehyde dehydrogenase family 4 285 3.4E-17 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 SUPERFAMILY SSF53720 2 415 4.58E-115 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 Gene3D G3DSA:3.40.605.10 238 417 5.0E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.472 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CO704_RS18940 1fe8a31362607dd66e9a3a382b6e8497 417 PIRSF PIRSF000151 1 417 1.9E-175 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 19 131 1.8E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 654 671 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 Pfam PF00593 TonB dependent receptor 209 667 3.0E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 SUPERFAMILY SSF56935 1 671 3.3E-116 T 28-03-2018 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 19 671 7.3E-92 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 Gene3D G3DSA:2.40.170.20 142 671 1.3E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS07265 2440b5a11208b01237c5dac54518592a 671 Gene3D G3DSA:2.170.130.10 15 141 3.0E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11820 eeac15a9bc31264f0d16d1b6172e278e 309 SUPERFAMILY SSF47240 27 269 6.84E-81 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS11820 eeac15a9bc31264f0d16d1b6172e278e 309 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 7 295 1.7E-155 T 28-03-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.14+1.14.13.149|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176 CO704_RS11820 eeac15a9bc31264f0d16d1b6172e278e 309 Pfam PF05138 Phenylacetic acid catabolic protein 17 291 1.8E-98 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CO704_RS11820 eeac15a9bc31264f0d16d1b6172e278e 309 Gene3D G3DSA:1.10.620.20 2 289 1.1E-77 T 28-03-2018 CO704_RS18350 4854a52d7c45780f6c421239a0ff7deb 110 Pfam PF02699 Preprotein translocase subunit 23 99 3.0E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC CO704_RS18350 4854a52d7c45780f6c421239a0ff7deb 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 4.7E-34 T 28-03-2018 IPR003849 Preprotein translocase YajC CO704_RS18350 4854a52d7c45780f6c421239a0ff7deb 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 8.7E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CO704_RS18350 4854a52d7c45780f6c421239a0ff7deb 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 8.7E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CO704_RS18350 4854a52d7c45780f6c421239a0ff7deb 110 SMART SM01323 19 102 9.4E-37 T 28-03-2018 IPR003849 Preprotein translocase YajC CO704_RS00540 84a8dc721c993ce8aaddf60eed563731 126 Hamap MF_02018 PanD maturation factor [panM]. 1 126 31.549 T 28-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 CO704_RS00540 84a8dc721c993ce8aaddf60eed563731 126 Gene3D G3DSA:3.40.630.30 1 126 1.5E-10 T 28-03-2018 CO704_RS00540 84a8dc721c993ce8aaddf60eed563731 126 SUPERFAMILY SSF55729 23 121 2.47E-9 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS00540 84a8dc721c993ce8aaddf60eed563731 126 Pfam PF12568 Acetyltransferase (GNAT) domain 2 124 1.1E-46 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS02340 2492ba76c13148e9cfb07a5a26d89e5e 393 SUPERFAMILY SSF103473 7 389 1.07E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02340 2492ba76c13148e9cfb07a5a26d89e5e 393 Pfam PF07690 Major Facilitator Superfamily 25 360 3.6E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS02340 2492ba76c13148e9cfb07a5a26d89e5e 393 Gene3D G3DSA:1.20.1250.20 206 392 1.6E-14 T 28-03-2018 CO704_RS02340 2492ba76c13148e9cfb07a5a26d89e5e 393 Gene3D G3DSA:1.20.1250.20 13 205 1.3E-24 T 28-03-2018 CO704_RS19195 a521786632524a9fe62e9d2f0f8562dd 180 Pfam PF07152 YaeQ protein 1 173 2.0E-71 T 28-03-2018 IPR009822 YaeQ CO704_RS19195 a521786632524a9fe62e9d2f0f8562dd 180 SMART SM01322 1 176 1.5E-107 T 28-03-2018 IPR009822 YaeQ CO704_RS19195 a521786632524a9fe62e9d2f0f8562dd 180 SUPERFAMILY SSF52980 2 178 2.95E-68 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS19195 a521786632524a9fe62e9d2f0f8562dd 180 Gene3D G3DSA:3.10.640.10 2 177 5.7E-74 T 28-03-2018 CO704_RS19195 a521786632524a9fe62e9d2f0f8562dd 180 PIRSF PIRSF011484 1 179 2.4E-65 T 28-03-2018 IPR009822 YaeQ CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.90.1170.50 6 125 3.7E-27 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 787 954 2.6E-44 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.465.10 836 955 3.1E-32 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.365.10 266 428 2.1E-47 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 PIRSF PIRSF000127 754 1068 1.9E-23 T 28-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 PIRSF PIRSF000127 7 769 1.5E-125 T 28-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SUPERFAMILY SSF55447 963 1067 3.14E-10 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 964 1064 5.6E-9 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 123 2.5E-20 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SUPERFAMILY SSF54665 9 125 2.49E-33 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SUPERFAMILY SSF56003 129 758 3.01E-179 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SMART SM01092 962 1065 2.1E-10 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SMART SM01008 19 128 2.1E-26 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.365.10 588 771 2.4E-49 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 SUPERFAMILY SSF56176 784 954 5.14E-45 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.365.10 453 587 1.3E-28 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 141 701 8.7E-162 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.390.50 958 1068 1.1E-12 T 28-03-2018 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.365.10 156 265 1.7E-26 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CO704_RS10945 701c00979639c8736b69c2b95dabe651 1068 Gene3D G3DSA:3.30.43.10 791 835 9.8E-6 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 SMART SM00354 1 73 7.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 Gene3D G3DSA:3.40.50.2300 57 174 2.6E-26 T 28-03-2018 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.4E-153 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 SUPERFAMILY SSF53822 60 314 6.87E-43 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 28-03-2018 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 28-03-2018 CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 311 3.4E-15 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CO704_RS19690 76fa388a4fac878c4fbf00d9a42ff8eb 334 Gene3D G3DSA:3.40.50.2300 175 308 4.9E-18 T 28-03-2018 CO704_RS20205 115614b21fd2daa38623143f5b65d28b 152 Gene3D G3DSA:3.90.960.10 1 150 3.1E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS20205 115614b21fd2daa38623143f5b65d28b 152 SUPERFAMILY SSF55826 4 152 7.59E-40 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS20205 115614b21fd2daa38623143f5b65d28b 152 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 2.6E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 1.1E-15 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 1.1E-15 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 1.1E-15 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 1.1E-15 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 Pfam PF00797 N-acetyltransferase 21 246 2.0E-69 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 SUPERFAMILY SSF54001 3 254 1.4E-73 T 28-03-2018 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 Gene3D G3DSA:3.30.2140.10 1 157 9.8E-44 T 28-03-2018 CO704_RS11330 e4ea91cbd789010408711578433b8b7f 270 Gene3D G3DSA:3.30.2140.10 167 262 1.6E-6 T 28-03-2018 CO704_RS06240 06e67d9e50be7a75c753dec3002d341d 350 SUPERFAMILY SSF117892 119 231 3.92E-5 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06240 06e67d9e50be7a75c753dec3002d341d 350 Pfam PF01145 SPFH domain / Band 7 family 42 258 6.5E-22 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06240 06e67d9e50be7a75c753dec3002d341d 350 SMART SM00244 38 242 0.0019 T 28-03-2018 IPR001107 Band 7 domain CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 9.3E-188 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PIRSF PIRSF000149 1 338 1.1E-131 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 8.4E-34 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 8.7E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 8.7E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 8.7E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 8.7E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 8.7E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 SMART SM00846 3 155 1.0E-79 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 SUPERFAMILY SSF55347 155 317 2.44E-56 T 28-03-2018 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.0E-54 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 SUPERFAMILY SSF51735 1 180 3.23E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.096 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 Gene3D G3DSA:3.40.50.720 1 164 4.7E-65 T 28-03-2018 CO704_RS02905 417403778c0ecc4d728b22fc9d024271 348 Gene3D G3DSA:3.30.360.10 165 318 1.2E-50 T 28-03-2018 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 436 453 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 Gene3D G3DSA:3.30.1360.60 421 497 2.7E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 Pfam PF00367 phosphotransferase system, EIIB 426 458 1.6E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 SUPERFAMILY SSF55604 423 497 5.62E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 Pfam PF02378 Phosphotransferase system, EIIC 19 336 7.6E-75 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS17595 4bf47c14c03e557e8c5ce1a2b07caee4 499 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 399 483 6.9E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS02570 bdc338882bb4e0ed16871343bf1a0e96 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 5.3E-67 T 28-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 CO704_RS02570 bdc338882bb4e0ed16871343bf1a0e96 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 2.5E-31 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 2.4E-190 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 43.299 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 8.7E-187 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 Gene3D G3DSA:3.40.50.150 156 366 1.3E-34 T 28-03-2018 CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 SUPERFAMILY SSF53335 7 365 5.63E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS23490 0aa2d362e8bd0e477d912cbcf67d6b9c 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 SUPERFAMILY SSF53720 2 455 1.02E-122 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 Gene3D G3DSA:3.40.605.10 1 258 2.2E-72 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 Gene3D G3DSA:3.40.309.10 259 453 6.1E-44 T 28-03-2018 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 486 1.4E-245 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 Pfam PF00171 Aldehyde dehydrogenase family 9 458 4.1E-116 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS13930 31c59231b88d7921ac9f74e0f0d9c39b 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 57.064 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 Gene3D G3DSA:3.40.50.1860 20 139 1.0E-26 T 28-03-2018 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 7.4E-26 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.536 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 SUPERFAMILY SSF53681 127 279 7.63E-33 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 SUPERFAMILY SSF53681 24 125 2.94E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 2.1E-89 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS23480 f554dc6aff3fb17ec929f16f90c9a7d0 283 Gene3D G3DSA:3.40.50.1860 140 273 1.2E-28 T 28-03-2018 CO704_RS17900 53b053bb1eed197bf6bd7f1f3374e170 88 Pfam PF10048 Predicted integral membrane protein (DUF2282) 31 84 4.9E-24 T 28-03-2018 IPR018740 Protein of unknown function DUF2282, integral membrane CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 SUPERFAMILY SSF69318 459 694 2.49E-18 T 28-03-2018 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 646 817 1.2E-27 T 28-03-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 33 323 3.6E-90 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 29 50 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 193 211 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 304 322 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 269 288 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 88 104 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 128 146 1.4E-40 T 28-03-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 870 1013 5.1E-47 T 28-03-2018 IPR022044 Insecticide toxin TcdB middle/C-terminal CO704_RS03135 ef79483bc35b5da62db28806ff6858ba 1423 Gene3D G3DSA:2.130.10.130 502 688 1.4E-7 T 28-03-2018 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 SUPERFAMILY SSF55890 336 398 1.31E-15 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 532 3.9E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Gene3D G3DSA:3.30.450.20 216 327 4.5E-11 T 28-03-2018 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Gene3D G3DSA:3.30.565.10 382 536 6.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Pfam PF17203 Single cache domain 3 48 179 1.8E-18 T 28-03-2018 IPR033463 Single cache domain 3 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 SMART SM00387 427 535 1.5E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 SUPERFAMILY SSF55874 427 532 1.96E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 381 1.0E-12 T 28-03-2018 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 9.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 9.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 9.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 9.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 SUPERFAMILY SSF103190 48 178 1.22E-37 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Gene3D G3DSA:3.30.450.20 41 181 5.7E-25 T 28-03-2018 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Pfam PF00989 PAS fold 222 320 1.7E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 SUPERFAMILY SSF55785 225 320 2.51E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS18635 04a3e622a8c114fb708d9ceb595f1b93 540 Gene3D G3DSA:1.10.287.130 328 381 3.7E-16 T 28-03-2018 CO704_RS12160 6e7faa4d3c6a26181255f49407c6744d 151 Pfam PF04965 Gene 25-like lysozyme 36 117 4.3E-11 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CO704_RS12160 6e7faa4d3c6a26181255f49407c6744d 151 Gene3D G3DSA:3.10.450.40 4 134 9.7E-16 T 28-03-2018 CO704_RS12160 6e7faa4d3c6a26181255f49407c6744d 151 SUPERFAMILY SSF160719 34 121 2.48E-17 T 28-03-2018 CO704_RS12160 6e7faa4d3c6a26181255f49407c6744d 151 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 117 8.5E-24 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CO704_RS07495 1e379f4c0eb924c201fca17763d6cc3f 406 Gene3D G3DSA:3.40.50.2000 217 394 3.4E-22 T 28-03-2018 CO704_RS07495 1e379f4c0eb924c201fca17763d6cc3f 406 SUPERFAMILY SSF53756 1 391 2.48E-39 T 28-03-2018 CO704_RS07495 1e379f4c0eb924c201fca17763d6cc3f 406 Pfam PF00534 Glycosyl transferases group 1 218 388 1.9E-17 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS07495 1e379f4c0eb924c201fca17763d6cc3f 406 Gene3D G3DSA:3.40.50.2000 16 216 3.9E-14 T 28-03-2018 CO704_RS07495 1e379f4c0eb924c201fca17763d6cc3f 406 Pfam PF13579 Glycosyl transferase 4-like domain 15 203 2.8E-24 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 29.786 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 Pfam PF02545 Maf-like protein 4 186 4.7E-45 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 7.2E-62 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 Gene3D G3DSA:3.90.950.10 2 194 2.5E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 SUPERFAMILY SSF52972 2 186 2.94E-60 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS14580 f1bdc7bcc299edd717605a912e735159 194 PIRSF PIRSF006305 1 192 2.6E-42 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 SUPERFAMILY SSF53850 89 279 5.79E-19 T 28-03-2018 CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 Gene3D G3DSA:3.40.190.10 186 267 7.9E-6 T 28-03-2018 CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 Pfam PF03466 LysR substrate binding domain 91 279 2.9E-8 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 Gene3D G3DSA:1.10.10.10 2 89 1.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 Gene3D G3DSA:3.40.190.10 90 185 7.2E-6 T 28-03-2018 CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.8E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS15045 469bb43da1dccb59b819d8db0c475db3 300 SUPERFAMILY SSF46785 4 81 2.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 SUPERFAMILY SSF57783 12 50 1.7E-13 T 28-03-2018 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Gene3D G3DSA:3.30.65.10 4 56 5.7E-17 T 28-03-2018 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Gene3D G3DSA:3.30.65.10 99 145 7.6E-14 T 28-03-2018 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Gene3D G3DSA:3.30.65.10 57 98 8.2E-16 T 28-03-2018 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 SUPERFAMILY SSF57783 60 100 3.91E-13 T 28-03-2018 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 7.3E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 97 1.1E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CO704_RS01280 e596be210c1a18cff92e8cb6a8165cbd 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 142 2.1E-14 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 Pfam PF00593 TonB dependent receptor 250 711 1.2E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 713 1.3E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 Gene3D G3DSA:2.170.130.10 34 178 1.3E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 171 3.8E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 Gene3D G3DSA:2.40.170.20 184 713 2.8E-76 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS11280 067d6e45786af494fdf27aa45224e156 713 SUPERFAMILY SSF56935 65 713 4.21E-121 T 28-03-2018 CO704_RS09325 d2c7e0662b483436ad32c79ca9a4f43c 464 Gene3D G3DSA:1.20.5.320 62 133 0.05 T 28-03-2018 CO704_RS01690 a804e904f42afbb53317b1e9ed36cd15 100 Gene3D G3DSA:3.30.750.24 2 99 3.8E-6 T 28-03-2018 IPR002645 STAS domain CO704_RS01690 a804e904f42afbb53317b1e9ed36cd15 100 Pfam PF13466 STAS domain 14 90 1.7E-16 T 28-03-2018 IPR002645 STAS domain CO704_RS01690 a804e904f42afbb53317b1e9ed36cd15 100 SUPERFAMILY SSF52091 1 93 7.46E-14 T 28-03-2018 IPR002645 STAS domain CO704_RS08655 ad8d9ce68f45898ba106ea6d13a107e7 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 314 6.4E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08655 ad8d9ce68f45898ba106ea6d13a107e7 317 Gene3D G3DSA:1.10.3720.10 2 303 4.6E-44 T 28-03-2018 CO704_RS08655 ad8d9ce68f45898ba106ea6d13a107e7 317 SUPERFAMILY SSF161098 91 302 3.66E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22290 060bcb731f30755139b3c86790f5f4eb 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 9.6E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS22290 060bcb731f30755139b3c86790f5f4eb 108 Gene3D G3DSA:3.40.50.2300 2 108 1.9E-36 T 28-03-2018 CO704_RS22290 060bcb731f30755139b3c86790f5f4eb 108 SUPERFAMILY SSF52794 1 102 2.12E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS12540 9903c6be4bf14ee89975977bfe195d87 83 Gene3D G3DSA:1.10.10.10 7 82 4.4E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12540 9903c6be4bf14ee89975977bfe195d87 83 Pfam PF08279 HTH domain 26 53 1.2E-6 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CO704_RS12540 9903c6be4bf14ee89975977bfe195d87 83 SUPERFAMILY SSF46785 10 53 3.63E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 Gene3D G3DSA:3.30.565.10 384 558 4.4E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 Gene3D G3DSA:3.30.450.40 214 374 6.8E-7 T 28-03-2018 IPR029016 GAF domain-like CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 SUPERFAMILY SSF55874 424 556 2.11E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 Pfam PF07694 5TMR of 5TMR-LYT 28 196 1.2E-57 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 SUPERFAMILY SSF55781 234 355 1.42E-8 T 28-03-2018 IPR029016 GAF domain-like CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 SMART SM00387 459 559 8.2E-4 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 Pfam PF06580 Histidine kinase 371 446 7.2E-22 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 SMART SM00065 218 365 6.4E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS12915 ecb8663593684b314837d0e7c9677661 562 Pfam PF13185 GAF domain 245 352 5.0E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS09865 ce0f8abdc6a73b0f61ae1801e2b30a55 306 Gene3D G3DSA:1.10.3720.10 2 294 5.4E-42 T 28-03-2018 CO704_RS09865 ce0f8abdc6a73b0f61ae1801e2b30a55 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09865 ce0f8abdc6a73b0f61ae1801e2b30a55 306 SUPERFAMILY SSF161098 89 290 1.31E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.9E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:4.10.950.10 197 272 4.7E-35 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.2E-131 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 SMART SM01383 42 118 1.9E-48 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 PIRSF PIRSF002158 12 273 2.9E-100 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.986 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.2E-55 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 SMART SM01382 124 251 6.7E-89 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:2.30.30.30 119 195 2.5E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:2.40.50.140 1 114 3.6E-48 T 28-03-2018 CO704_RS01110 cdf56cb1ea4b195336705719f90d9775 273 SUPERFAMILY SSF50104 127 269 2.35E-59 T 28-03-2018 IPR008991 Translation protein SH3-like domain CO704_RS21190 23b91371c4eb0365307577fb64d302ef 370 SUPERFAMILY SSF53383 7 366 7.91E-32 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS21190 23b91371c4eb0365307577fb64d302ef 370 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 365 9.6E-182 T 28-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CO704_RS21190 23b91371c4eb0365307577fb64d302ef 370 Pfam PF03841 L-seryl-tRNA selenium transferase 13 293 6.8E-13 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS21190 23b91371c4eb0365307577fb64d302ef 370 Gene3D G3DSA:3.40.640.10 44 247 3.1E-18 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS11160 9fc893095cd7eaa9b281de326d6afc89 314 Gene3D G3DSA:3.40.50.1820 38 304 6.1E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11160 9fc893095cd7eaa9b281de326d6afc89 314 Pfam PF00326 Prolyl oligopeptidase family 114 192 3.4E-6 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS11160 9fc893095cd7eaa9b281de326d6afc89 314 SUPERFAMILY SSF53474 73 261 2.06E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS14475 d4643981abf1aefbc35569461924756d 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 8.6E-70 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 Gene3D G3DSA:3.50.50.60 5 159 5.1E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.6E-8 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.6E-8 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.6E-8 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 SUPERFAMILY SSF51905 7 107 1.14E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 SUPERFAMILY SSF51905 225 352 1.14E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 7.3E-16 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.3E-16 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 7.3E-16 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 7.3E-16 T 28-03-2018 CO704_RS14475 d4643981abf1aefbc35569461924756d 434 Gene3D G3DSA:3.50.50.60 169 370 2.5E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 126 155 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Hamap MF_01587 DNA ligase B [ligB]. 5 560 50.168 T 28-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Gene3D G3DSA:1.10.287.610 23 87 3.2E-12 T 28-03-2018 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Gene3D G3DSA:3.30.470.30 130 235 7.5E-15 T 28-03-2018 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 SUPERFAMILY SSF50249 311 391 8.39E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Gene3D G3DSA:2.40.50.140 314 382 2.8E-16 T 28-03-2018 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 31 309 1.3E-22 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 SMART SM00532 30 427 7.7E-58 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 SUPERFAMILY SSF47781 404 555 2.63E-16 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 388 2.3E-17 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Gene3D G3DSA:3.30.1490.70 236 313 1.3E-8 T 28-03-2018 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 SUPERFAMILY SSF56091 26 308 6.0E-60 T 28-03-2018 CO704_RS23860 9dd65b2434d703449caa4a9f372ffbb1 563 Gene3D G3DSA:1.10.150.20 416 542 1.2E-4 T 28-03-2018 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SMART SM00304 184 236 2.2E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SMART SM00388 237 301 2.9E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SUPERFAMILY SSF158472 185 233 5.62E-10 T 28-03-2018 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SMART SM00387 346 458 8.4E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 Gene3D G3DSA:3.30.565.10 305 464 2.4E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 457 1.6E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 Gene3D G3DSA:1.10.287.130 227 296 5.3E-11 T 28-03-2018 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 Pfam PF00672 HAMP domain 185 232 3.2E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.4E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SUPERFAMILY SSF55874 290 456 1.44E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.4E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS07365 d280ee81d3bd556e4518f207ea6000c2 464 SUPERFAMILY SSF47384 220 301 2.75E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Gene3D G3DSA:3.40.50.720 147 241 5.8E-17 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Gene3D G3DSA:3.50.50.60 315 401 9.1E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Gene3D G3DSA:3.50.50.60 242 314 5.3E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 SUPERFAMILY SSF46548 7 157 2.3E-41 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 8.5E-38 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 8.5E-38 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 8.5E-38 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 8.5E-38 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 8.5E-38 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.0E-38 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 3.5E-262 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Gene3D G3DSA:1.10.1060.10 2 146 8.0E-41 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Gene3D G3DSA:3.50.50.60 402 471 8.9E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 SUPERFAMILY SSF51971 145 401 1.06E-67 T 28-03-2018 CO704_RS01560 901bb51afe9eed757513d7b226eb71e2 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 5.7E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10450 0ed375a895545f709bb31dce23060137 296 Gene3D G3DSA:1.10.3720.10 15 285 1.1E-28 T 28-03-2018 CO704_RS10450 0ed375a895545f709bb31dce23060137 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 9.1E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS10450 0ed375a895545f709bb31dce23060137 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 1.1E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS10450 0ed375a895545f709bb31dce23060137 296 SUPERFAMILY SSF161098 90 277 3.66E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15170 a763ccd9b2fc8e9bb2caaf7900a400b5 269 SUPERFAMILY SSF50494 54 153 3.54E-8 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS15170 a763ccd9b2fc8e9bb2caaf7900a400b5 269 SUPERFAMILY SSF50494 201 216 3.54E-8 T 28-03-2018 IPR009003 Peptidase S1, PA clan CO704_RS15170 a763ccd9b2fc8e9bb2caaf7900a400b5 269 Gene3D G3DSA:2.40.10.10 22 149 0.0015 T 28-03-2018 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 SUPERFAMILY SSF51161 255 438 3.67E-52 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 350 0.0015 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 1.7E-5 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0019 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 5.2E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.28 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 1.4E-205 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Gene3D G3DSA:2.160.10.10 317 440 8.7E-37 T 28-03-2018 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 2.5E-20 T 28-03-2018 IPR025877 MobA-like NTP transferase CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 SUPERFAMILY SSF53448 6 252 1.55E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Gene3D G3DSA:2.160.10.10 245 316 8.9E-18 T 28-03-2018 CO704_RS24145 efc9636a9f0325f8bfc10c77170afbc6 456 Gene3D G3DSA:3.90.550.10 1 244 3.4E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 83 719 1.1E-202 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 SUPERFAMILY SSF56281 498 743 3.67E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 224 407 1.2E-39 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 Pfam PF03772 Competence protein 203 469 4.7E-51 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 SMART SM00849 509 690 6.4E-7 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 Gene3D G3DSA:3.60.15.10 494 691 8.5E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15575 c003ba0e10c9a700231bd5d833c647cd 755 Pfam PF00753 Metallo-beta-lactamase superfamily 507 679 4.4E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 Gene3D G3DSA:3.40.190.10 179 265 1.2E-8 T 28-03-2018 CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 SUPERFAMILY SSF46785 6 88 3.97E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 7.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 Gene3D G3DSA:3.40.190.10 89 178 1.1E-12 T 28-03-2018 CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 SUPERFAMILY SSF53850 88 290 6.52E-30 T 28-03-2018 CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 Gene3D G3DSA:1.10.10.10 4 84 3.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13555 74bf3dca0965b252f823b8ceeb9e1d63 312 Pfam PF03466 LysR substrate binding domain 88 290 6.4E-28 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS22890 baf4f08dde5104e90c12683193b4886c 211 Pfam PF02581 Thiamine monophosphate synthase 20 189 7.6E-55 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS22890 baf4f08dde5104e90c12683193b4886c 211 SUPERFAMILY SSF51391 5 205 3.79E-64 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS22890 baf4f08dde5104e90c12683193b4886c 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 5.0E-57 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS22890 baf4f08dde5104e90c12683193b4886c 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 207 20.327 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS22890 baf4f08dde5104e90c12683193b4886c 211 Gene3D G3DSA:3.20.20.70 9 206 1.6E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS11145 a916387d529763f426a9b8470c3ec841 129 Gene3D G3DSA:3.30.1330.40 4 129 1.7E-35 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS11145 a916387d529763f426a9b8470c3ec841 129 Pfam PF01042 Endoribonuclease L-PSP 11 127 2.1E-28 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS11145 a916387d529763f426a9b8470c3ec841 129 SUPERFAMILY SSF55298 6 127 4.87E-37 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 Pfam PF08479 POTRA domain, ShlB-type 71 146 4.1E-25 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 Gene3D G3DSA:3.10.20.310 74 146 1.1E-17 T 28-03-2018 CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 PIRSF PIRSF029745 1 553 1.7E-150 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 204 516 4.9E-103 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 Pfam PF17287 POTRA domain 147 199 3.5E-21 T 28-03-2018 IPR035251 ShlB, POTRA domain CO704_RS10205 f4f63cd42076529362728ea3e6a916c9 553 Gene3D G3DSA:2.40.160.50 172 552 1.3E-58 T 28-03-2018 CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 SUPERFAMILY SSF53383 4 401 1.11E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 Pfam PF00266 Aminotransferase class-V 26 394 1.1E-152 T 28-03-2018 IPR000192 Aminotransferase class V domain CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 Gene3D G3DSA:3.40.640.10 33 283 5.7E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 Gene3D G3DSA:3.90.1150.10 284 401 2.5E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS13640 51fb21dbbbce8cb6a5e1a3e9b79a8bff 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.5E-182 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Gene3D G3DSA:3.30.70.20 128 179 1.7E-8 T 28-03-2018 CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Gene3D G3DSA:3.30.70.20 1 18 0.018 T 28-03-2018 CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Pfam PF12800 4Fe-4S binding domain 10 22 0.4 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Pfam PF13247 4Fe-4S dicluster domain 55 104 3.4E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 SUPERFAMILY SSF54862 1 170 3.28E-43 T 28-03-2018 CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Gene3D G3DSA:3.30.70.20 71 127 1.2E-16 T 28-03-2018 CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Pfam PF12798 4Fe-4S binding domain 131 151 0.021 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS24285 96a7281c1fd4e47c54df4d410f79306d 181 Gene3D G3DSA:3.30.70.20 19 70 6.9E-11 T 28-03-2018 CO704_RS00155 02246540413480ffed2eeced148d0735 211 SUPERFAMILY SSF81342 4 206 1.57E-56 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS00155 02246540413480ffed2eeced148d0735 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 205 4.8E-66 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CO704_RS00155 02246540413480ffed2eeced148d0735 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 7.8E-23 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS00155 02246540413480ffed2eeced148d0735 211 Gene3D G3DSA:1.20.950.20 1 211 5.3E-55 T 28-03-2018 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 PIRSF PIRSF001430 10 262 1.3E-78 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 SUPERFAMILY SSF55120 9 266 1.17E-91 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 Gene3D G3DSA:3.30.70.580 9 114 2.2E-36 T 28-03-2018 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 12 248 5.6E-78 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 Pfam PF01416 tRNA pseudouridine synthase 18 112 1.5E-9 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 Pfam PF01416 tRNA pseudouridine synthase 152 254 4.1E-29 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 11 253 35.639 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06345 6905daf621bbc58b4aaf9e5f887349c2 271 Gene3D G3DSA:3.30.70.660 115 252 8.0E-35 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS13130 54f75ef9e189fd118bf2b7b328b3087b 196 Gene3D G3DSA:3.40.630.30 9 196 2.3E-23 T 28-03-2018 CO704_RS13130 54f75ef9e189fd118bf2b7b328b3087b 196 Pfam PF13302 Acetyltransferase (GNAT) domain 56 170 6.7E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS13130 54f75ef9e189fd118bf2b7b328b3087b 196 SUPERFAMILY SSF55729 26 194 1.77E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS18010 4969080562645e561882fbf18a57bdac 562 SUPERFAMILY SSF52467 193 358 4.05E-58 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS18010 4969080562645e561882fbf18a57bdac 562 SUPERFAMILY SSF52518 4 186 6.48E-62 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Gene3D G3DSA:3.40.50.1220 196 348 6.5E-52 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS18010 4969080562645e561882fbf18a57bdac 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 SUPERFAMILY SSF52518 366 560 4.34E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS18010 4969080562645e561882fbf18a57bdac 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 12 561 3.3E-211 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 179 3.9E-61 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Gene3D G3DSA:3.40.50.970 4 195 2.3E-64 T 28-03-2018 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 334 9.9E-46 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Gene3D G3DSA:3.40.50.970 349 551 2.7E-52 T 28-03-2018 CO704_RS18010 4969080562645e561882fbf18a57bdac 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 1.0E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS20115 09737a3ae77fbd008608c60a0d8bb892 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.1E-22 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CO704_RS20115 09737a3ae77fbd008608c60a0d8bb892 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 5.7E-76 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CO704_RS20115 09737a3ae77fbd008608c60a0d8bb892 425 Pfam PF07670 Nucleoside recognition 99 195 1.5E-8 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS20115 09737a3ae77fbd008608c60a0d8bb892 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 1.1E-149 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CO704_RS22495 ce166499761a7e8817ac6ff5abcc0a43 548 Pfam PF00999 Sodium/hydrogen exchanger family 8 420 6.3E-72 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CO704_RS22495 ce166499761a7e8817ac6ff5abcc0a43 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 7.9E-223 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CO704_RS15165 518c29e8a6846f3f43c954716aed4c1d 412 Pfam PF13356 Arm DNA-binding domain 15 98 2.7E-14 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS15165 518c29e8a6846f3f43c954716aed4c1d 412 Gene3D G3DSA:1.10.150.130 103 228 7.6E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS15165 518c29e8a6846f3f43c954716aed4c1d 412 Gene3D G3DSA:1.10.443.10 229 395 1.2E-18 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS15165 518c29e8a6846f3f43c954716aed4c1d 412 Pfam PF00589 Phage integrase family 250 360 6.7E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS15165 518c29e8a6846f3f43c954716aed4c1d 412 SUPERFAMILY SSF56349 114 397 7.95E-48 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS25470 201db724f8c6144a697b17ecc7d39fdd 167 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 113 125 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 CO704_RS25470 201db724f8c6144a697b17ecc7d39fdd 167 SUPERFAMILY SSF56112 19 146 7.96E-15 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS25470 201db724f8c6144a697b17ecc7d39fdd 167 Gene3D G3DSA:1.10.510.10 112 162 8.4E-10 T 28-03-2018 CO704_RS25470 201db724f8c6144a697b17ecc7d39fdd 167 Pfam PF00069 Protein kinase domain 99 144 8.0E-10 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CO704_RS25470 201db724f8c6144a697b17ecc7d39fdd 167 Gene3D G3DSA:3.30.200.20 55 111 1.2E-4 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1025 0.0 T 28-03-2018 IPR017701 Putative selenate reductase YgfK CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 452 530 7.4E-16 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 936 947 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:1.10.1060.10 852 964 1.4E-10 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:1.10.1060.10 407 547 1.1E-24 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:3.40.50.720 548 639 8.8E-14 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:3.50.50.60 640 687 3.7E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF46548 869 960 3.82E-10 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF46548 399 559 2.04E-18 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:3.50.50.60 688 851 1.5E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Gene3D G3DSA:3.20.20.70 43 406 1.2E-9 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF51971 549 784 2.65E-45 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 550 837 1.9E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 PRINTS PR00419 Adrenodoxin reductase family signature 679 693 6.8E-16 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 PRINTS PR00419 Adrenodoxin reductase family signature 550 572 6.8E-16 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 PRINTS PR00419 Adrenodoxin reductase family signature 573 586 6.8E-16 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF51395 44 140 6.8E-12 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF51395 285 405 6.8E-12 T 28-03-2018 CO704_RS10980 df6039615b7bcd3c03716c3b588c994c 1030 SUPERFAMILY SSF51395 204 255 6.8E-12 T 28-03-2018 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 Gene3D G3DSA:1.20.200.10 203 508 4.1E-121 T 28-03-2018 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 SUPERFAMILY SSF48557 4 496 2.75E-184 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 7 507 42.738 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 10 495 3.7E-203 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 Gene3D G3DSA:1.10.275.10 7 201 4.2E-66 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CO704_RS13905 9ca757d653018f54a5675a19eb1d5c6d 514 Pfam PF00221 Aromatic amino acid lyase 16 473 9.8E-181 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 PRINTS PR01036 Tetracycline resistance protein TetB signature 3 27 1.7E-5 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 PRINTS PR01036 Tetracycline resistance protein TetB signature 124 148 1.7E-5 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 PRINTS PR01036 Tetracycline resistance protein TetB signature 63 85 1.7E-5 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 PRINTS PR01036 Tetracycline resistance protein TetB signature 324 344 1.7E-5 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 Gene3D G3DSA:1.20.1250.20 1 186 9.0E-30 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 Gene3D G3DSA:1.20.1250.20 187 367 7.5E-10 T 28-03-2018 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 Pfam PF07690 Major Facilitator Superfamily 13 338 9.2E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03245 49cdced6a6fb817f66a4aae4e3d24dc8 369 SUPERFAMILY SSF103473 2 367 9.02E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.3E-67 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Gene3D G3DSA:3.40.1060.10 521 682 3.7E-27 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 PIRSF PIRSF036687 1 859 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Gene3D G3DSA:3.30.499.10 402 520 4.2E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 SUPERFAMILY SSF74778 2 160 5.1E-68 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.0E-38 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 SUPERFAMILY SSF53732 379 859 1.44E-149 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 SUPERFAMILY SSF52016 162 371 3.14E-72 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Gene3D G3DSA:3.20.19.10 162 364 1.3E-35 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Gene3D G3DSA:3.30.499.10 683 865 8.5E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS19505 d9ab2efe8200837af67c7dd95665520f 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 4.4E-98 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 Gene3D G3DSA:3.40.50.790 68 149 5.5E-35 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 3.4E-52 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 8.4E-107 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 Gene3D G3DSA:3.30.190.20 150 228 2.2E-21 T 28-03-2018 CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 PIRSF PIRSF002155 1 227 1.3E-77 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 SUPERFAMILY SSF56808 6 225 1.19E-82 T 28-03-2018 IPR023674 Ribosomal protein L1-like CO704_RS22955 86b50001be4405739efb6bf74869a4bc 235 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.219 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 Gene3D G3DSA:1.10.10.10 6 93 3.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 SUPERFAMILY SSF53850 97 305 3.77E-35 T 28-03-2018 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 Gene3D G3DSA:3.40.190.10 94 192 5.4E-20 T 28-03-2018 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 SUPERFAMILY SSF46785 10 121 1.82E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 Gene3D G3DSA:3.40.190.10 193 275 2.7E-11 T 28-03-2018 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13165 d45a859c34b71f64c1bc9e060c09c06a 307 Pfam PF03466 LysR substrate binding domain 97 304 1.3E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 7.7E-83 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 42.693 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Gene3D G3DSA:3.30.70.20 127 147 1.7E-11 T 28-03-2018 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Gene3D G3DSA:3.30.70.20 23 126 2.3E-12 T 28-03-2018 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 PIRSF PIRSF005784 3 190 4.4E-83 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Gene3D G3DSA:3.30.70.20 148 180 1.1E-5 T 28-03-2018 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 SUPERFAMILY SSF54862 37 176 1.17E-28 T 28-03-2018 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Pfam PF04060 Putative Fe-S cluster 44 76 5.4E-13 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 9.6E-17 T 28-03-2018 CO704_RS13360 43407cded7da8c15cd791f51d22b7667 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS07620 d24bef83a193eb2bc8c64228b94da15b 344 Gene3D G3DSA:3.40.50.720 1 329 6.4E-64 T 28-03-2018 CO704_RS07620 d24bef83a193eb2bc8c64228b94da15b 344 SUPERFAMILY SSF51735 1 261 2.65E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07620 d24bef83a193eb2bc8c64228b94da15b 344 TIGRFAM TIGR04130 FnlA: UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase 1 337 5.2E-222 T 28-03-2018 IPR026415 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase CO704_RS07620 d24bef83a193eb2bc8c64228b94da15b 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 4.2E-105 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CO704_RS07620 d24bef83a193eb2bc8c64228b94da15b 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 331 9.7E-24 T 28-03-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Gene3D G3DSA:3.40.50.720 76 200 2.2E-28 T 28-03-2018 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Gene3D G3DSA:3.40.50.720 1 75 4.8E-7 T 28-03-2018 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 6.8E-70 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 3.5E-27 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 SUPERFAMILY SSF48179 204 381 4.42E-46 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.764 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 Gene3D G3DSA:1.10.1040.10 207 382 3.7E-48 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS00225 587e9e6b419c31ee31ee69f23fec83ea 382 SUPERFAMILY SSF51735 1 203 1.29E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 1.5E-27 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 Gene3D G3DSA:3.40.980.10 1 188 3.4E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 1.4E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 SMART SM00852 7 153 2.5E-20 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CO704_RS19930 5a6d113664d9150dbb838caf09bcc090 195 SUPERFAMILY SSF53218 3 188 8.51E-47 T 28-03-2018 IPR001453 MoaB/Mog domain CO704_RS04040 f0933ce3fcabfae633a8570b1d9e5afa 343 SUPERFAMILY SSF51735 4 335 2.14E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS04040 f0933ce3fcabfae633a8570b1d9e5afa 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 5.0E-25 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS04040 f0933ce3fcabfae633a8570b1d9e5afa 343 Gene3D G3DSA:3.40.50.720 1 343 7.1E-48 T 28-03-2018 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 1.4E-57 T 28-03-2018 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.6E-132 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.4E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 SUPERFAMILY SSF51735 10 252 3.97E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 Gene3D G3DSA:3.40.50.720 43 253 6.3E-60 T 28-03-2018 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 Gene3D G3DSA:3.40.50.720 3 42 1.1E-6 T 28-03-2018 CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11350 78458e6cc44929d1e563efbce00e1c78 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS08335 7e3f2c94bf419a826992b7a57e486d67 166 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.7E-34 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CO704_RS08335 7e3f2c94bf419a826992b7a57e486d67 166 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 6.0E-50 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CO704_RS08335 7e3f2c94bf419a826992b7a57e486d67 166 SUPERFAMILY SSF52980 2 153 1.55E-51 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS08335 7e3f2c94bf419a826992b7a57e486d67 166 Gene3D G3DSA:3.40.960.10 21 156 2.3E-30 T 28-03-2018 CO704_RS03955 1614b43ccf709d828b74f0a2ca20454e 396 Pfam PF05426 Alginate lyase 66 344 4.8E-69 T 28-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 CO704_RS03955 1614b43ccf709d828b74f0a2ca20454e 396 SUPERFAMILY SSF48230 75 350 4.12E-43 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CO704_RS03955 1614b43ccf709d828b74f0a2ca20454e 396 Gene3D G3DSA:1.50.10.100 77 386 3.5E-48 T 28-03-2018 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 PIRSF PIRSF004983 1 556 7.8E-177 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 4.9E-137 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 SUPERFAMILY SSF52518 367 551 5.89E-32 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Gene3D G3DSA:3.40.50.970 355 556 9.2E-32 T 28-03-2018 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 138 4.0E-26 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.91 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Gene3D G3DSA:3.40.50.970 1 204 2.3E-51 T 28-03-2018 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 1.6E-82 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 419 535 7.2E-9 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 Gene3D G3DSA:3.40.50.1220 217 354 1.1E-16 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CO704_RS06635 944ee9053e43c64b86f467e81d66d8ae 556 SUPERFAMILY SSF52518 5 179 6.96E-31 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 3.9E-77 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 Gene3D G3DSA:3.30.470.20 171 277 1.1E-35 T 28-03-2018 CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 Gene3D G3DSA:3.30.1490.20 115 170 3.1E-12 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 Gene3D G3DSA:3.40.50.20 1 114 6.5E-35 T 28-03-2018 CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.896 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.1E-94 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 CO704_RS15885 1e38639183cd4fe0ef2b952cad7d76bd 300 SUPERFAMILY SSF56059 98 288 9.09E-49 T 28-03-2018 CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.8E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 Gene3D G3DSA:3.30.360.10 134 346 1.2E-37 T 28-03-2018 CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 SUPERFAMILY SSF55347 129 289 3.92E-28 T 28-03-2018 CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 4.7E-16 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 SUPERFAMILY SSF51735 2 191 8.31E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS13340 d0d0f60b66dd0740fa623b221ddff6f5 346 Gene3D G3DSA:3.40.50.720 1 133 5.1E-38 T 28-03-2018 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.7E-43 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.7E-43 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.7E-43 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.7E-43 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.7E-43 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 SUPERFAMILY SSF160544 244 351 2.22E-41 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 Gene3D G3DSA:3.40.1690.10 218 353 4.1E-59 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 354 1.5E-138 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CO704_RS08775 8b5fc0fea6074b2e7b4137be5d52eb48 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.4E-126 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CO704_RS14090 99795b92d6b4accb9d5e85ef2e50e2b3 82 Pfam PF10798 Biofilm development protein YmgB/AriR 29 64 7.7E-5 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.643 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.0E-65 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.3E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 SMART SM00649 9 141 7.7E-84 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 Gene3D G3DSA:3.30.1550.10 3 72 1.8E-34 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 28-03-2018 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 SUPERFAMILY SSF46906 68 141 1.57E-25 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-23 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS22960 9b1492734e7b997312567b4ac93235ee 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.0E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 SUPERFAMILY SSF111369 43 185 7.06E-20 T 28-03-2018 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 Gene3D G3DSA:2.40.50.100 47 118 1.0E-10 T 28-03-2018 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 229 2.1E-29 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 Gene3D G3DSA:2.40.50.100 147 278 1.0E-4 T 28-03-2018 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 Pfam PF13533 Biotin-lipoyl like 47 93 2.7E-14 T 28-03-2018 CO704_RS06100 b6db6fb6603cca703581ed8c9a8e6bdb 287 Pfam PF13437 HlyD family secretion protein 155 236 4.0E-7 T 28-03-2018 CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 SUPERFAMILY SSF103025 3 242 1.49E-64 T 28-03-2018 CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 Pfam PF01571 Aminomethyltransferase folate-binding domain 33 183 2.2E-9 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 PIRSF PIRSF006487 8 326 3.5E-10 T 28-03-2018 CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 Gene3D G3DSA:3.30.70.1400 27 240 1.4E-23 T 28-03-2018 CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 SUPERFAMILY SSF101790 244 326 3.92E-24 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 322 48.611 T 28-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 CO704_RS03075 ed2f0422ce360c225114a4e8bc4260bc 328 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 251 2.1E-24 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site CO704_RS03670 8bf20818e72b1181e30ac6b008e69005 346 Gene3D G3DSA:3.40.630.10 21 344 3.8E-46 T 28-03-2018 CO704_RS03670 8bf20818e72b1181e30ac6b008e69005 346 Pfam PF04389 Peptidase family M28 100 327 7.5E-32 T 28-03-2018 IPR007484 Peptidase M28 CO704_RS03670 8bf20818e72b1181e30ac6b008e69005 346 SUPERFAMILY SSF53187 38 317 1.97E-42 T 28-03-2018 CO704_RS18130 7f877b21fd4a6bfdc4030a2b403b8cd4 350 Gene3D G3DSA:3.40.50.1100 141 328 2.7E-40 T 28-03-2018 CO704_RS18130 7f877b21fd4a6bfdc4030a2b403b8cd4 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 314 1.6E-46 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS18130 7f877b21fd4a6bfdc4030a2b403b8cd4 350 Gene3D G3DSA:3.40.50.1100 29 140 1.3E-22 T 28-03-2018 CO704_RS18130 7f877b21fd4a6bfdc4030a2b403b8cd4 350 SUPERFAMILY SSF53686 13 330 3.4E-71 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Gene3D G3DSA:1.10.10.10 1 107 8.8E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 SUPERFAMILY SSF46785 2 103 1.25E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 SUPERFAMILY SSF50331 170 259 2.13E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Pfam PF03459 TOBE domain 198 259 1.6E-12 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Pfam PF03459 TOBE domain 124 187 2.8E-14 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 SUPERFAMILY SSF50331 122 191 7.53E-19 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 2.8E-38 T 28-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Gene3D G3DSA:2.40.50.100 108 183 7.1E-20 T 28-03-2018 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Gene3D G3DSA:2.40.50.100 184 253 3.1E-16 T 28-03-2018 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 190 9.7E-27 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 PIRSF PIRSF005763 1 263 1.7E-97 T 28-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CO704_RS16530 7f3d5cc4dae503bf73be1b305ba3d5d7 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 7.5E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00310 78ac4b02aa7543ce1169310896c4562e 178 Gene3D G3DSA:3.40.630.30 1 178 2.9E-31 T 28-03-2018 CO704_RS00310 78ac4b02aa7543ce1169310896c4562e 178 SUPERFAMILY SSF55729 2 174 7.34E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS00310 78ac4b02aa7543ce1169310896c4562e 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 3.8E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS09055 4ab0b7db91d43d3b5a06c2b74c62ee9a 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.737 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CO704_RS09055 4ab0b7db91d43d3b5a06c2b74c62ee9a 293 Pfam PF01435 Peptidase family M48 74 288 3.4E-39 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CO704_RS09055 4ab0b7db91d43d3b5a06c2b74c62ee9a 293 Gene3D G3DSA:3.30.2010.10 64 157 6.1E-21 T 28-03-2018 CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 462 4.9E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 Gene3D G3DSA:3.90.76.10 63 175 6.2E-34 T 28-03-2018 CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 Gene3D G3DSA:3.40.190.10 176 310 3.1E-38 T 28-03-2018 CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 Gene3D G3DSA:3.10.105.10 311 511 2.8E-58 T 28-03-2018 CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 PIRSF PIRSF002741 2 541 1.6E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS15305 bfca1f0e61cd11edf740c1f209195f5c 541 SUPERFAMILY SSF53850 35 537 4.89E-148 T 28-03-2018 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Gene3D G3DSA:3.90.199.10 35 216 6.9E-75 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 SUPERFAMILY SSF56719 32 483 7.59E-154 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 742 33.866 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 741 0.0 T 28-03-2018 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Gene3D G3DSA:3.30.1360.40 239 332 4.9E-23 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 SMART SM00434 12 462 8.9E-235 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 1.9E-9 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 636 1.4E-4 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Gene3D G3DSA:1.10.268.10 345 484 1.7E-44 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 SUPERFAMILY SSF101904 498 740 7.46E-50 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 1.3E-133 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CO704_RS02495 6910a81b910e5ca1e551eb01c77d2d6d 756 Gene3D G3DSA:2.120.10.90 496 743 1.4E-42 T 28-03-2018 CO704_RS24530 3c6ce1dbf705acbc60ddc64bc85c5f32 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 7.9E-86 T 28-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CO704_RS24530 3c6ce1dbf705acbc60ddc64bc85c5f32 187 Pfam PF03352 Methyladenine glycosylase 6 182 4.2E-80 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CO704_RS24530 3c6ce1dbf705acbc60ddc64bc85c5f32 187 Gene3D G3DSA:1.10.340.30 1 182 1.4E-83 T 28-03-2018 CO704_RS24530 3c6ce1dbf705acbc60ddc64bc85c5f32 187 SUPERFAMILY SSF48150 2 184 7.77E-81 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00052 856 1100 3.1E-10 T 28-03-2018 IPR001633 EAL domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00086 630 672 4.6E-4 T 28-03-2018 IPR001610 PAC motif CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00086 376 418 4.5E-7 T 28-03-2018 IPR001610 PAC motif CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00086 503 544 6.6E-5 T 28-03-2018 IPR001610 PAC motif CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00091 303 369 6.8E-10 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00091 556 624 1.3E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00091 430 497 0.6 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF00990 Diguanylate cyclase, GGDEF domain 683 839 3.6E-43 T 28-03-2018 IPR000160 GGDEF domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SUPERFAMILY SSF55073 688 846 1.73E-46 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 554 675 6.3E-11 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 422 1.5E-28 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF13426 PAS domain 315 416 1.1E-8 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SMART SM00267 672 844 2.5E-62 T 28-03-2018 IPR000160 GGDEF domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 681 843 1.7E-36 T 28-03-2018 IPR000160 GGDEF domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Gene3D G3DSA:3.30.70.270 689 852 6.8E-55 T 28-03-2018 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Gene3D G3DSA:3.30.450.20 433 549 2.8E-16 T 28-03-2018 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Gene3D G3DSA:3.30.450.20 283 432 2.5E-23 T 28-03-2018 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Gene3D G3DSA:3.30.450.20 550 688 6.8E-21 T 28-03-2018 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF08447 PAS fold 452 538 7.5E-9 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SUPERFAMILY SSF141868 893 1102 2.75E-22 T 28-03-2018 IPR001633 EAL domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SUPERFAMILY SSF55785 310 419 9.34E-19 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF00989 PAS fold 562 669 3.4E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Gene3D G3DSA:3.20.20.450 885 1104 5.2E-23 T 28-03-2018 IPR001633 EAL domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF05231 MASE1 19 284 2.0E-28 T 28-03-2018 IPR007895 MASE1 CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SUPERFAMILY SSF55785 542 670 9.07E-18 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 SUPERFAMILY SSF55785 439 546 4.89E-13 T 28-03-2018 IPR000014 PAS domain CO704_RS07410 c81103bd624c86384e4e9b0e0f5992ab 1110 Pfam PF00563 EAL domain 893 1095 5.5E-22 T 28-03-2018 IPR001633 EAL domain CO704_RS17480 16b48876f806e2ca0e51b8ea7a9da9a2 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS17480 16b48876f806e2ca0e51b8ea7a9da9a2 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 139 8.7E-41 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CO704_RS17480 16b48876f806e2ca0e51b8ea7a9da9a2 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 138 6.5E-10 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS17480 16b48876f806e2ca0e51b8ea7a9da9a2 141 Pfam PF00460 Flagella basal body rod protein 8 32 2.4E-6 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS25570 18c72aab10852d9faf30c7d0906e196a 256 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 100 3.7E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS25570 18c72aab10852d9faf30c7d0906e196a 256 SUPERFAMILY SSF46894 22 100 2.13E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS25570 18c72aab10852d9faf30c7d0906e196a 256 Gene3D G3DSA:1.10.10.10 2 107 8.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25570 18c72aab10852d9faf30c7d0906e196a 256 SMART SM00862 24 100 1.4E-8 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 192 213 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 214 235 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 278 296 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 112 137 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 258 277 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 172 190 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 148 171 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 236 257 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 PRINTS PR01002 Flagellar protein FlgJ signature 296 313 4.4E-143 T 28-03-2018 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 296 6.1E-119 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 SMART SM00047 143 307 4.4E-56 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 Pfam PF10135 Rod binding protein 50 96 1.0E-17 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 163 296 2.3E-19 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CO704_RS14625 b4a26b0b7e8c82421dc582e48c846502 314 Gene3D G3DSA:1.10.530.10 145 300 6.0E-33 T 28-03-2018 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 Gene3D G3DSA:1.10.10.10 1 70 1.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 Gene3D G3DSA:3.40.50.1360 79 251 2.7E-44 T 28-03-2018 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 SMART SM00420 18 70 7.6E-21 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 SUPERFAMILY SSF100950 89 250 3.7E-35 T 28-03-2018 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 SUPERFAMILY SSF46785 16 70 5.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 72 1.7E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 SMART SM01134 87 248 1.9E-76 T 28-03-2018 CO704_RS21090 89d83f94455d4e4ba25e88de10e781af 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 1.1E-57 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS00905 96a4c17e165b069fed2a4c8903d0cd52 363 SUPERFAMILY SSF53383 32 321 2.32E-32 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS00905 96a4c17e165b069fed2a4c8903d0cd52 363 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 51 241 3.3E-5 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CO704_RS00905 96a4c17e165b069fed2a4c8903d0cd52 363 Gene3D G3DSA:3.40.640.10 1 243 1.8E-24 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS05090 bb821f39db31938d276c85c51557768d 335 PIRSF PIRSF028757 3 335 4.7E-83 T 28-03-2018 IPR003507 Peptidase family S66 CO704_RS05090 bb821f39db31938d276c85c51557768d 335 Gene3D G3DSA:3.50.30.60 167 335 4.1E-48 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CO704_RS05090 bb821f39db31938d276c85c51557768d 335 Gene3D G3DSA:3.40.50.10740 3 165 1.7E-44 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CO704_RS05090 bb821f39db31938d276c85c51557768d 335 SUPERFAMILY SSF52317 2 166 8.7E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS05090 bb821f39db31938d276c85c51557768d 335 Pfam PF02016 LD-carboxypeptidase 15 320 7.6E-71 T 28-03-2018 IPR003507 Peptidase family S66 CO704_RS05090 bb821f39db31938d276c85c51557768d 335 SUPERFAMILY SSF141986 173 325 4.84E-40 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CO704_RS06615 fd600c3fc774269c9137ea02bd14ff82 285 Pfam PF13460 NAD(P)H-binding 6 120 1.6E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06615 fd600c3fc774269c9137ea02bd14ff82 285 Gene3D G3DSA:3.40.50.720 2 208 4.9E-19 T 28-03-2018 CO704_RS06615 fd600c3fc774269c9137ea02bd14ff82 285 SUPERFAMILY SSF51735 3 237 2.0E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 Gene3D G3DSA:3.30.70.240 136 199 1.4E-19 T 28-03-2018 CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 5.9E-17 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 6.8E-78 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 SUPERFAMILY SSF54980 136 203 1.08E-16 T 28-03-2018 IPR035647 EF-G domain III/V-like CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 Gene3D G3DSA:3.30.230.30 7 134 1.8E-37 T 28-03-2018 IPR001498 Impact, N-terminal CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 SUPERFAMILY SSF54211 3 131 1.37E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS23050 12d2a366393e9fcd5b47012ee285de45 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.0E-26 T 28-03-2018 IPR001498 Impact, N-terminal CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 Gene3D G3DSA:3.40.50.300 263 488 3.2E-35 T 28-03-2018 CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 Gene3D G3DSA:3.40.50.300 1 262 6.4E-47 T 28-03-2018 CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 SMART SM00382 280 483 0.88 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 SMART SM00382 23 220 3.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 SUPERFAMILY SSF52540 267 484 1.84E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 SUPERFAMILY SSF52540 3 231 1.51E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 Pfam PF00005 ABC transporter 271 425 1.2E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 Pfam PF00005 ABC transporter 14 166 9.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15120 98a3e32a88ce7bd9a523dfb1bbac2d59 501 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 SUPERFAMILY SSF55729 168 303 3.32E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 SMART SM00347 26 126 5.1E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 Pfam PF00583 Acetyltransferase (GNAT) family 200 291 3.4E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 SUPERFAMILY SSF46785 21 141 8.24E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 Gene3D G3DSA:1.10.10.10 1 165 1.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 Gene3D G3DSA:3.40.630.30 166 315 6.4E-26 T 28-03-2018 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 Pfam PF12802 MarR family 37 90 2.3E-10 T 28-03-2018 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 7.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 7.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13795 97af0fd3b5fedea5df45d73c1e5fa320 319 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 7.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS04580 0805bff7b9697d15d73296d75af1dbf8 215 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 7.3E-37 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CO704_RS04580 0805bff7b9697d15d73296d75af1dbf8 215 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 185 3.0E-25 T 28-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CO704_RS04580 0805bff7b9697d15d73296d75af1dbf8 215 SUPERFAMILY SSF89069 1 66 3.92E-22 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CO704_RS04580 0805bff7b9697d15d73296d75af1dbf8 215 PIRSF PIRSF016938 1 204 6.8E-37 T 28-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 CO704_RS09120 d68c149c4c618fc2d8978b15ae02911c 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 148 3.0E-53 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CO704_RS09120 d68c149c4c618fc2d8978b15ae02911c 152 PIRSF PIRSF020687 1 152 4.8E-65 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CO704_RS09120 d68c149c4c618fc2d8978b15ae02911c 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 30.68 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CO704_RS09120 d68c149c4c618fc2d8978b15ae02911c 152 Pfam PF06173 Protein of unknown function (DUF986) 4 149 3.9E-62 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CO704_RS18760 b90f3156c132a66f6cd95c60ef2d4e9e 179 SUPERFAMILY SSF49401 30 179 9.94E-38 T 28-03-2018 IPR008966 Adhesion domain CO704_RS18760 b90f3156c132a66f6cd95c60ef2d4e9e 179 Pfam PF00419 Fimbrial protein 31 179 8.6E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18760 b90f3156c132a66f6cd95c60ef2d4e9e 179 Gene3D G3DSA:2.60.40.1090 29 179 9.1E-38 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS09010 703ff74792c8fc6f8fca7e416d2395bb 176 Pfam PF13302 Acetyltransferase (GNAT) domain 12 155 3.8E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS09010 703ff74792c8fc6f8fca7e416d2395bb 176 Gene3D G3DSA:3.40.630.30 1 173 8.6E-26 T 28-03-2018 CO704_RS09010 703ff74792c8fc6f8fca7e416d2395bb 176 SUPERFAMILY SSF55729 5 159 7.27E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 Gene3D G3DSA:3.40.800.10 5 306 1.5E-92 T 28-03-2018 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 Pfam PF00491 Arginase family 34 297 5.8E-86 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 Hamap MF_01418 Agmatinase [speB]. 1 304 69.857 T 28-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 SUPERFAMILY SSF52768 14 301 3.78E-91 T 28-03-2018 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 TIGRFAM TIGR01230 agmatinase: agmatinase 23 299 7.1E-116 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CO704_RS02855 188459e0c9b33327741e3b0380dd4fc5 306 PIRSF PIRSF036979 14 304 7.3E-101 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CO704_RS25630 b5fa0683a88b2189b895caba529d790b 83 Gene3D G3DSA:1.10.1200.10 1 82 1.4E-16 T 28-03-2018 CO704_RS25630 b5fa0683a88b2189b895caba529d790b 83 SUPERFAMILY SSF47336 3 81 2.62E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS25630 b5fa0683a88b2189b895caba529d790b 83 Pfam PF00550 Phosphopantetheine attachment site 9 75 5.9E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PIRSF PIRSF001522 2 310 7.9E-121 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 SUPERFAMILY SSF69917 25 310 6.8E-90 T 28-03-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 55 80 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 81 106 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 36 50 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 141 168 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 184 205 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 232 252 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 113 140 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 206 227 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 PRINTS PR00482 Omptin serine protease signature 253 273 2.2E-85 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 Pfam PF01278 Omptin family 29 310 1.5E-111 T 28-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CO704_RS00295 c9176d4448302e415d602e38b02658eb 310 Gene3D G3DSA:2.40.128.90 20 310 1.5E-55 T 28-03-2018 CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 Pfam PF01374 Glycosyl hydrolase family 46 36 247 1.3E-86 T 28-03-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 Gene3D G3DSA:3.30.386.10 19 126 2.7E-45 T 28-03-2018 CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 ProSitePatterns PS60000 Chitosanases families 46 and 80 active sites signature. 42 80 - T 28-03-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 Gene3D G3DSA:1.20.141.10 127 254 1.3E-50 T 28-03-2018 CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 SUPERFAMILY SSF53955 24 259 2.31E-77 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS11675 c31e2e885e0a954af3fb40a2816a5cdd 260 PIRSF PIRSF036551 15 259 4.1E-90 T 28-03-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 CO704_RS13925 b0004b28300179e65dd27e2fd0d50b63 443 Pfam PF04996 Succinylarginine dihydrolase 5 442 7.5E-213 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CO704_RS13925 b0004b28300179e65dd27e2fd0d50b63 443 SUPERFAMILY SSF55909 5 443 3.53E-204 T 28-03-2018 CO704_RS13925 b0004b28300179e65dd27e2fd0d50b63 443 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 6 442 8.6E-237 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CO704_RS13925 b0004b28300179e65dd27e2fd0d50b63 443 Gene3D G3DSA:3.75.10.20 3 443 1.3E-217 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CO704_RS13925 b0004b28300179e65dd27e2fd0d50b63 443 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 2 443 58.082 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CO704_RS12105 c2f06067382c5aa9034d24b0194f6c2d 262 SUPERFAMILY SSF74653 139 257 5.36E-19 T 28-03-2018 CO704_RS12105 c2f06067382c5aa9034d24b0194f6c2d 262 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 178 256 2.9E-13 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS12105 c2f06067382c5aa9034d24b0194f6c2d 262 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 178 256 8.0E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS12105 c2f06067382c5aa9034d24b0194f6c2d 262 Gene3D G3DSA:3.30.1150.10 68 262 1.5E-19 T 28-03-2018 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 Gene3D G3DSA:1.25.40.10 20 294 3.2E-51 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 Pfam PF13181 Tetratricopeptide repeat 240 261 0.041 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 SMART SM00028 62 95 0.0033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 SMART SM00028 96 129 2.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 SMART SM00028 234 267 14.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 PIRSF PIRSF004654 1 292 3.3E-120 T 28-03-2018 IPR023605 Lipoprotein NlpI CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 SUPERFAMILY SSF48452 27 283 1.38E-77 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS01830 8cd00bbe7a69f8ffdb9fa1b630c403e6 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 4.0E-119 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 6.8E-103 T 28-03-2018 CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 SUPERFAMILY SSF53335 42 291 9.25E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 Gene3D G3DSA:3.40.50.150 101 294 7.2E-33 T 28-03-2018 CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.997 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CO704_RS01375 771e70bd5f235304b0c10a6c6819713f 294 PIRSF PIRSF000401 1 294 1.3E-91 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CO704_RS20500 2b2b95d6127e4760e5f37184144daed4 179 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 11 173 2.9E-55 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CO704_RS20500 2b2b95d6127e4760e5f37184144daed4 179 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 11 173 7.6E-53 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CO704_RS24355 04c4263a2621145761fa84c2850efee4 180 Pfam PF00857 Isochorismatase family 4 145 3.4E-22 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS24355 04c4263a2621145761fa84c2850efee4 180 Gene3D G3DSA:3.40.50.850 1 180 8.2E-33 T 28-03-2018 CO704_RS24355 04c4263a2621145761fa84c2850efee4 180 SUPERFAMILY SSF52499 2 179 1.96E-34 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 Gene3D G3DSA:1.10.287.470 139 188 2.6E-7 T 28-03-2018 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 2.2E-15 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 SUPERFAMILY SSF111369 195 270 1.83E-7 T 28-03-2018 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 4.6E-141 T 28-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 Gene3D G3DSA:2.40.50.100 208 364 3.0E-6 T 28-03-2018 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 Gene3D G3DSA:2.40.50.100 60 138 4.3E-11 T 28-03-2018 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 SUPERFAMILY SSF111369 56 114 4.32E-6 T 28-03-2018 CO704_RS03925 2da952cfde4af14f0b28530f7b28ce40 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 2.1E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS21455 e8e69b105b6b9f629ef1a1d8e93422a6 127 Gene3D G3DSA:2.60.120.10 9 111 4.8E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS21455 e8e69b105b6b9f629ef1a1d8e93422a6 127 SUPERFAMILY SSF51182 22 115 8.3E-15 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS21455 e8e69b105b6b9f629ef1a1d8e93422a6 127 Pfam PF07883 Cupin domain 38 111 4.3E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS13730 f868fe766409e42e4b1dc95cc23f7b97 54 Gene3D G3DSA:2.10.70.10 18 54 1.4E-17 T 28-03-2018 CO704_RS13730 f868fe766409e42e4b1dc95cc23f7b97 54 Pfam PF10636 Hemin uptake protein hemP 19 54 4.1E-17 T 28-03-2018 IPR019600 Hemin uptake protein HemP CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 SMART SM00382 35 218 1.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 Pfam PF00005 ABC transporter 26 180 7.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 Gene3D G3DSA:3.40.50.300 1 231 1.1E-45 T 28-03-2018 CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 SUPERFAMILY SSF52540 4 225 1.23E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 223 1.7E-109 T 28-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS22360 d209e079a24ba5401f3d7a9a426dca85 234 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS07290 4a211949e517df8e62604b4217f4ae98 300 SUPERFAMILY SSF51197 92 223 4.94E-18 T 28-03-2018 CO704_RS07290 4a211949e517df8e62604b4217f4ae98 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 8.9E-47 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CO704_RS07290 4a211949e517df8e62604b4217f4ae98 300 Gene3D G3DSA:2.60.120.330 61 244 2.1E-43 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CO704_RS02210 61ecfdf77bc9db5bb41426dde0378721 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 9.5E-62 T 28-03-2018 IPR031339 Domain of unknown function DUF4942 CO704_RS13990 3cf95f6450aa1a8a43ceb1dcba277e70 187 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 128 5.2E-10 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CO704_RS13990 3cf95f6450aa1a8a43ceb1dcba277e70 187 Gene3D G3DSA:1.20.1290.10 16 185 4.1E-31 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS13990 3cf95f6450aa1a8a43ceb1dcba277e70 187 SUPERFAMILY SSF69118 11 180 1.03E-44 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 SUPERFAMILY SSF53335 6 275 1.44E-61 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 Gene3D G3DSA:1.10.8.10 1 84 2.0E-21 T 28-03-2018 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 Pfam PF13847 Methyltransferase domain 111 248 3.9E-20 T 28-03-2018 IPR025714 Methyltransferase domain CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 7.5E-90 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 275 7.1E-87 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 Gene3D G3DSA:3.40.50.150 85 276 3.5E-47 T 28-03-2018 CO704_RS09675 07d9972525b274c5a438ca8dd618139a 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 44.73 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 Pfam PF00771 FHIPEP family 30 675 3.0E-199 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 18 686 1.1E-248 T 28-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PIRSF PIRSF005419 6 692 1.2E-202 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 2.0E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS16085 d9f88b3d4e0abeecbf05c2dae5ed754f 698 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 28-03-2018 IPR025505 FHIPEP conserved site CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 PIRSF PIRSF000379 8 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 Gene3D G3DSA:3.20.70.20 2 760 2.6E-294 T 28-03-2018 CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 SUPERFAMILY SSF51998 4 758 2.14E-293 T 28-03-2018 CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 Pfam PF01228 Glycine radical 630 741 7.4E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CO704_RS15615 ca88f09089d0140d353f7cbfa2d4c4a0 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 5.9E-206 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CO704_RS11420 7df01ec3ee3949494604f0e86261b4ae 219 Pfam PF10099 Anti-sigma-K factor rskA 61 217 3.5E-22 T 28-03-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 CO704_RS09130 a7fa5c0a4754a8d951a63e4ffd4cf42e 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.8E-128 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CO704_RS09130 a7fa5c0a4754a8d951a63e4ffd4cf42e 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 3.5E-75 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CO704_RS23845 579005291e17d665b13af0a83716f0d9 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.3E-133 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CO704_RS23845 579005291e17d665b13af0a83716f0d9 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.9E-44 T 28-03-2018 IPR013527 YicC-like, N-terminal CO704_RS23845 579005291e17d665b13af0a83716f0d9 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.3E-34 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 Gene3D G3DSA:1.20.1250.20 201 404 1.7E-24 T 28-03-2018 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 341 364 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 106 127 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 280 301 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 79 103 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 17 33 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 PRINTS PR01035 Tetracycline resistance protein signature 136 158 8.2E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 SUPERFAMILY SSF103473 209 392 3.79E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 SUPERFAMILY SSF103473 6 197 6.28E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 Gene3D G3DSA:1.20.1250.20 3 200 2.9E-36 T 28-03-2018 CO704_RS18495 a59e61bc80292a45fe510718d4d1e183 405 Pfam PF07690 Major Facilitator Superfamily 11 268 1.0E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 SUPERFAMILY SSF48317 25 246 3.79E-49 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PIRSF PIRSF000897 1 249 1.2E-107 T 28-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 SMART SM00014 115 227 6.3E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 162 169 - T 28-03-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 Gene3D G3DSA:1.20.144.10 19 249 1.4E-44 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 Pfam PF01569 PAP2 superfamily 129 229 8.0E-16 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PRINTS PR00483 Bacterial acid phosphatase class A signature 67 86 5.2E-58 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PRINTS PR00483 Bacterial acid phosphatase class A signature 132 150 5.2E-58 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PRINTS PR00483 Bacterial acid phosphatase class A signature 158 184 5.2E-58 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PRINTS PR00483 Bacterial acid phosphatase class A signature 190 214 5.2E-58 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS14015 fb9a8990801e1933c7e85fd89f29988e 249 PRINTS PR00483 Bacterial acid phosphatase class A signature 224 242 5.2E-58 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 PRINTS PR00173 Glutamate-aspartate symporter signature 482 502 6.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 PRINTS PR00173 Glutamate-aspartate symporter signature 144 164 6.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 PRINTS PR00173 Glutamate-aspartate symporter signature 364 383 6.7E-5 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 1.7E-286 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 512 4.2E-285 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CO704_RS09260 9bd2d6d6af5f3150ff722252a236fd03 521 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 521 358.747 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CO704_RS13430 31b98455c772fc2cab6c14be8d3ea3a1 297 Gene3D G3DSA:3.40.190.10 187 292 1.4E-8 T 28-03-2018 CO704_RS13430 31b98455c772fc2cab6c14be8d3ea3a1 297 SMART SM00062 53 282 4.4E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13430 31b98455c772fc2cab6c14be8d3ea3a1 297 SUPERFAMILY SSF53850 50 279 8.83E-37 T 28-03-2018 CO704_RS13430 31b98455c772fc2cab6c14be8d3ea3a1 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 280 3.7E-32 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS13430 31b98455c772fc2cab6c14be8d3ea3a1 297 Gene3D G3DSA:3.40.190.10 49 185 4.4E-21 T 28-03-2018 CO704_RS08260 dd6ed1bf6721f0b7755cdbf937e1d7b5 113 Gene3D G3DSA:3.40.50.2300 24 113 8.2E-4 T 28-03-2018 CO704_RS08260 dd6ed1bf6721f0b7755cdbf937e1d7b5 113 Pfam PF10686 Protein of unknown function (DUF2493) 2 66 6.3E-13 T 28-03-2018 IPR019627 Mycobacteriophage D29, Gp61 CO704_RS09705 9a7ab65d20b54f2724acde2a42d5640b 81 Pfam PF08980 Domain of unknown function (DUF1883) 12 80 7.1E-7 T 28-03-2018 IPR015073 Atu1913-like CO704_RS09705 9a7ab65d20b54f2724acde2a42d5640b 81 Gene3D G3DSA:4.10.1210.10 1 81 4.3E-21 T 28-03-2018 IPR015073 Atu1913-like CO704_RS09705 9a7ab65d20b54f2724acde2a42d5640b 81 SUPERFAMILY SSF141099 2 81 5.49E-19 T 28-03-2018 IPR015073 Atu1913-like CO704_RS25520 a58aab4bebcbc3cc06db550d08bd7491 267 SMART SM00421 187 244 2.2E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25520 a58aab4bebcbc3cc06db550d08bd7491 267 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 243 3.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25520 a58aab4bebcbc3cc06db550d08bd7491 267 Gene3D G3DSA:1.10.10.10 48 253 3.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25520 a58aab4bebcbc3cc06db550d08bd7491 267 SUPERFAMILY SSF46894 184 251 4.42E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 PIRSF PIRSF005902 1 261 9.8E-77 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 SUPERFAMILY SSF51556 1 258 1.82E-83 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 65.215 T 28-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 Pfam PF01026 TatD related DNase 2 256 3.2E-69 T 28-03-2018 IPR001130 TatD family GO:0016788 CO704_RS23095 bfba0e6e1b4b81d8ea39eb3303d92381 266 Gene3D G3DSA:3.20.20.140 1 266 9.9E-85 T 28-03-2018 CO704_RS13125 44c858bf611459c25a13f094671c00fd 340 Gene3D G3DSA:2.160.10.10 17 199 4.7E-10 T 28-03-2018 CO704_RS13125 44c858bf611459c25a13f094671c00fd 340 Gene3D G3DSA:2.160.10.10 200 316 3.4E-13 T 28-03-2018 CO704_RS13125 44c858bf611459c25a13f094671c00fd 340 SUPERFAMILY SSF51161 37 309 6.0E-42 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 Pfam PF03641 Possible lysine decarboxylase 190 329 1.9E-33 T 28-03-2018 IPR031100 LOG family CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 Gene3D G3DSA:3.40.50.450 124 452 2.6E-101 T 28-03-2018 CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 Gene3D G3DSA:3.30.1850.10 3 111 2.5E-49 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 453 1.9E-56 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 SUPERFAMILY SSF102405 122 330 6.26E-42 T 28-03-2018 CO704_RS03490 ca48309b2f505d3cf05618c8f19d0fd0 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.1E-47 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 SUPERFAMILY SSF51569 4 215 2.62E-59 T 28-03-2018 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 Pfam PF01791 DeoC/LacD family aldolase 65 195 4.2E-10 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 PIRSF PIRSF001357 1 228 2.6E-63 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 Gene3D G3DSA:3.20.20.70 1 222 4.2E-65 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 6 223 25.215 T 28-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 215 2.9E-53 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS00120 ab7be0c0785a1c9aa11e538016df6a68 237 SMART SM01133 7 222 4.7E-56 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS12925 1201fd2b493671d266149a06c48c4b88 222 Gene3D G3DSA:1.10.3720.10 10 222 2.1E-35 T 28-03-2018 CO704_RS12925 1201fd2b493671d266149a06c48c4b88 222 SUPERFAMILY SSF161098 13 212 2.22E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12925 1201fd2b493671d266149a06c48c4b88 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 222 1.3E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 Pfam PF00571 CBS domain 206 261 2.0E-4 T 28-03-2018 IPR000644 CBS domain CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 Pfam PF00571 CBS domain 274 325 1.2E-5 T 28-03-2018 IPR000644 CBS domain CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 SUPERFAMILY SSF53697 15 325 1.65E-65 T 28-03-2018 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 Gene3D G3DSA:3.40.50.10490 11 202 8.0E-55 T 28-03-2018 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 Gene3D G3DSA:3.10.580.10 203 326 1.2E-19 T 28-03-2018 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 Pfam PF01380 SIS domain 46 177 1.4E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 PIRSF PIRSF004692 2 328 1.7E-133 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CO704_RS01655 de434f38ebf8fe4f395afde150a3bcc6 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 1.8E-127 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.5E-22 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 SUPERFAMILY SSF56219 1 268 5.89E-89 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.8E-107 T 28-03-2018 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.8E-93 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CO704_RS13945 8b192ce0127fe11a5a6b91f522033647 268 Gene3D G3DSA:3.60.10.10 1 268 5.1E-52 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CO704_RS00285 75f794632dda71923b69f256f86b383b 152 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 4 151 1.3E-56 T 28-03-2018 IPR010351 Protein of unknown function DUF943 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 Gene3D G3DSA:3.10.310.10 1 122 4.3E-27 T 28-03-2018 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 224 6.1E-29 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 SUPERFAMILY SSF54506 4 261 2.09E-73 T 28-03-2018 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 PIRSF PIRSF016184 1 262 1.3E-47 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 Gene3D G3DSA:3.10.310.10 123 250 2.9E-30 T 28-03-2018 CO704_RS10775 a92b5f4564d75325b44f1b0bfc8fc174 263 Pfam PF02567 Phenazine biosynthesis-like protein 9 255 9.8E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CO704_RS02555 7d5f42ce77ebba4b3ded650736c04928 219 Pfam PF09335 SNARE associated Golgi protein 48 173 4.8E-20 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Gene3D G3DSA:3.40.50.2300 58 168 2.0E-25 T 28-03-2018 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 59.655 T 28-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Gene3D G3DSA:1.10.260.40 2 57 9.4E-20 T 28-03-2018 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 SMART SM00354 1 71 3.0E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Gene3D G3DSA:3.40.50.2300 169 334 4.4E-52 T 28-03-2018 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.1E-41 T 28-03-2018 CO704_RS13550 08b8a379fd7579d53657b51761d08f3b 341 SUPERFAMILY SSF53822 60 340 2.16E-95 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 28-03-2018 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 5.2E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 116 2.4E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS13815 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 Pfam PF01228 Glycine radical 16 108 1.3E-22 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 PIRSF PIRSF000378 2 127 9.6E-56 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.377 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 SUPERFAMILY SSF51998 64 126 5.04E-24 T 28-03-2018 CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 3.0E-71 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CO704_RS04540 b9dd45351d9b8477f6a7f2ba339b80c3 127 Gene3D G3DSA:3.20.70.20 47 127 9.3E-30 T 28-03-2018 CO704_RS17720 03ec453bd8faa0b91c1c44c292a4a39c 265 Pfam PF05947 Type VI secretion system, TssF 17 261 7.9E-51 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 Gene3D G3DSA:2.40.110.10 179 278 1.7E-17 T 28-03-2018 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 Gene3D G3DSA:1.20.140.10 279 453 1.6E-33 T 28-03-2018 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 443 3.7E-28 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 2.9E-13 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 SUPERFAMILY SSF47203 287 447 1.77E-38 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CO704_RS20925 1ad8ed8d4304cc9b458d58afb7fbc03c 544 SUPERFAMILY SSF56645 61 287 2.82E-29 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 SUPERFAMILY SSF53244 286 414 1.01E-33 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 Gene3D G3DSA:3.40.1190.10 3 287 9.7E-75 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.3E-108 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 PIRSF PIRSF001563 7 419 1.2E-107 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 Gene3D G3DSA:3.90.190.20 288 419 1.1E-31 T 28-03-2018 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 Pfam PF08245 Mur ligase middle domain 54 196 1.6E-9 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 SUPERFAMILY SSF53623 13 284 2.35E-86 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 340 6.4E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS06360 50538727cbc33d68c44d5a57ea99a41d 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.0E-108 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 300 1.2E-159 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 SUPERFAMILY SSF54211 134 278 1.06E-53 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 Gene3D G3DSA:3.30.230.20 1 128 9.0E-49 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 Gene3D G3DSA:3.30.1700.10 129 299 4.0E-70 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 SUPERFAMILY SSF54211 3 124 7.59E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS19610 7a23667523e8bb3777ab80d34b72ae6d 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.197 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CO704_RS17465 17f0f357d08c48888e7294d19696133a 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 239 1.6E-13 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS17465 17f0f357d08c48888e7294d19696133a 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 119 5.0E-26 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS17465 17f0f357d08c48888e7294d19696133a 243 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS17465 17f0f357d08c48888e7294d19696133a 243 SUPERFAMILY SSF117143 77 166 6.02E-8 T 28-03-2018 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 PIRSF PIRSF000379 30 810 4.6E-183 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 SUPERFAMILY SSF51998 4 809 6.1E-229 T 28-03-2018 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 Gene3D G3DSA:3.20.70.20 9 810 2.7E-274 T 28-03-2018 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 28-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 1.4E-212 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CO704_RS10385 0bb7fb741fe77f2ad3363917b56d2615 810 Pfam PF01228 Glycine radical 688 791 7.6E-29 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 Pfam PF00366 Ribosomal protein S17 10 76 4.8E-34 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 SUPERFAMILY SSF50249 5 82 1.33E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 Gene3D G3DSA:2.40.50.140 5 82 5.6E-35 T 28-03-2018 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.3E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.3E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.3E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 3.0E-35 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.2E-38 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01140 a0898ade7325ae95e183f9f09bb9001f 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.278 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS05675 32f29d8f4176cde27e98975cc1e16128 231 Gene3D G3DSA:3.40.50.1820 5 213 4.2E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS05675 32f29d8f4176cde27e98975cc1e16128 231 SUPERFAMILY SSF53474 6 204 5.67E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS05675 32f29d8f4176cde27e98975cc1e16128 231 Pfam PF02230 Phospholipase/Carboxylesterase 4 206 5.2E-44 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CO704_RS24820 88c4d68e0bea63c05021b7be1f8d9831 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 316 2.3E-59 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CO704_RS24820 88c4d68e0bea63c05021b7be1f8d9831 327 Gene3D G3DSA:3.90.245.10 1 326 2.0E-77 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CO704_RS24820 88c4d68e0bea63c05021b7be1f8d9831 327 SUPERFAMILY SSF53590 1 298 9.42E-70 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CO704_RS01960 7e57af817725482ee2542197971fdddf 310 Gene3D G3DSA:3.40.50.1370 1 146 8.4E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 SUPERFAMILY SSF53671 4 306 3.8E-99 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.904 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.8E-122 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.9E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.9E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.9E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.9E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 Gene3D G3DSA:3.40.50.1370 147 292 2.7E-47 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.7E-27 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CO704_RS01960 7e57af817725482ee2542197971fdddf 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.8E-47 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CO704_RS07740 7e49dfedddd64504af8ba669589db365 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 135 1.1E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS07740 7e49dfedddd64504af8ba669589db365 144 Gene3D G3DSA:3.10.180.10 18 140 1.9E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS07740 7e49dfedddd64504af8ba669589db365 144 SUPERFAMILY SSF54593 19 137 1.51E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.805 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 Gene3D G3DSA:3.65.10.10 21 228 1.9E-65 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 SUPERFAMILY SSF55205 3 423 7.19E-144 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 PIRSF PIRSF000505 3 427 3.5E-155 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.7E-153 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 4.7E-144 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 Gene3D G3DSA:3.65.10.10 229 425 6.9E-68 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CO704_RS15595 1ed244eede6a12702ba9b2a4279a1103 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CO704_RS09700 e086ffa6e6e9664a2511e49d04a1a9ea 231 Gene3D G3DSA:3.10.490.10 32 218 4.2E-34 T 28-03-2018 CO704_RS09700 e086ffa6e6e9664a2511e49d04a1a9ea 231 SUPERFAMILY SSF110857 47 160 5.36E-9 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CO704_RS09700 e086ffa6e6e9664a2511e49d04a1a9ea 231 Pfam PF04752 ChaC-like protein 47 214 3.9E-51 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 Gene3D G3DSA:1.10.10.60 177 230 1.9E-10 T 28-03-2018 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 Gene3D G3DSA:1.10.10.60 231 279 2.1E-8 T 28-03-2018 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 SUPERFAMILY SSF46689 176 226 1.84E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 SUPERFAMILY SSF46689 228 278 1.7E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 Pfam PF02311 AraC-like ligand binding domain 21 155 8.2E-19 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 SUPERFAMILY SSF51215 24 162 3.53E-21 T 28-03-2018 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 Pfam PF12833 Helix-turn-helix domain 198 276 4.9E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 Gene3D G3DSA:2.60.120.280 6 176 5.4E-11 T 28-03-2018 CO704_RS05060 bd6f604850e697fca3aa8d2838539b61 282 SMART SM00342 192 274 2.9E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 SUPERFAMILY SSF47729 1 90 8.1E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.8E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 Gene3D G3DSA:4.10.520.10 1 90 9.1E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 SMART SM00411 1 90 4.2E-44 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS22855 dd21064b923ca067c4a3b444e58a075c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PIRSF PIRSF000166 2 301 3.0E-129 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 Pfam PF01218 Coproporphyrinogen III oxidase 9 301 1.4E-133 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 Gene3D G3DSA:3.40.1500.10 1 301 1.5E-140 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 276 57.565 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 SUPERFAMILY SSF102886 3 301 1.24E-139 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 161 190 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 261 287 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 89 113 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 233 260 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 124 146 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 47 68 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS05760 c991662a7c33903423a8d03a548e217f 301 PRINTS PR00073 Coprogen oxidase signature 30 46 6.5E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CO704_RS04940 1a09c68a1f33d6ddaefb3d8958a39d36 66 PIRSF PIRSF039003 3 66 1.3E-31 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CO704_RS04940 1a09c68a1f33d6ddaefb3d8958a39d36 66 SUPERFAMILY SSF140319 3 64 7.19E-26 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CO704_RS04940 1a09c68a1f33d6ddaefb3d8958a39d36 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.5E-31 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CO704_RS04940 1a09c68a1f33d6ddaefb3d8958a39d36 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.9E-31 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CO704_RS04940 1a09c68a1f33d6ddaefb3d8958a39d36 66 Gene3D G3DSA:1.10.10.600 2 64 6.4E-33 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CO704_RS24570 8dd0c183efb694af72e33144feed1a5e 244 SUPERFAMILY SSF52540 1 235 7.31E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24570 8dd0c183efb694af72e33144feed1a5e 244 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 4.8E-75 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CO704_RS24570 8dd0c183efb694af72e33144feed1a5e 244 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 1.7E-102 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CO704_RS24570 8dd0c183efb694af72e33144feed1a5e 244 Gene3D G3DSA:3.40.50.300 2 239 1.3E-28 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Gene3D G3DSA:2.20.25.90 50 120 4.4E-17 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Gene3D G3DSA:3.90.55.10 538 604 7.0E-21 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 SUPERFAMILY SSF50692 686 813 1.81E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Gene3D G3DSA:2.40.40.20 676 813 5.1E-35 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Gene3D G3DSA:3.40.228.10 205 483 3.4E-64 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 SMART SM00926 55 115 9.2E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Gene3D G3DSA:3.40.228.10 605 675 1.6E-12 T 28-03-2018 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 115 9.0E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 813 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Pfam PF01568 Molydopterin dinucleotide binding domain 694 805 1.4E-27 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 516 533 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 Pfam PF00384 Molybdopterin oxidoreductase 118 575 9.2E-108 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 60 78 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CO704_RS15640 b2ea59c573132b900b8c2a98a11fcb3d 813 SUPERFAMILY SSF53706 57 696 1.28E-173 T 28-03-2018 CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 4.5E-38 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 SUPERFAMILY SSF57863 86 198 9.15E-9 T 28-03-2018 CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 Pfam PF02565 Recombination protein O C terminal 83 226 4.9E-23 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 Pfam PF11967 Recombination protein O N terminal 4 76 1.7E-23 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.292 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 SUPERFAMILY SSF50249 4 75 1.46E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS04620 40e46e76025b77b17040ad11a5263d11 245 Gene3D G3DSA:2.40.50.140 1 76 6.5E-26 T 28-03-2018 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 SUPERFAMILY SSF51366 4 252 1.41E-84 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Gene3D G3DSA:3.20.20.70 2 260 6.2E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 30.989 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 5.3E-97 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 SUPERFAMILY SSF51366 258 451 5.49E-57 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.35 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Gene3D G3DSA:3.20.20.70 261 453 7.9E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS10255 79f288267fde7b9f519ec01603c8d288 453 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 1.1E-58 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CO704_RS12375 3e9080f84a4b36908a7ab0b54a9cd6b3 225 Gene3D G3DSA:3.30.2000.10 1 151 2.9E-25 T 28-03-2018 CO704_RS12375 3e9080f84a4b36908a7ab0b54a9cd6b3 225 Pfam PF08873 Domain of unknown function (DUF1834) 1 195 9.0E-45 T 28-03-2018 IPR014972 Bacteriophage Mu, Gp37 CO704_RS23255 4f2cf45159a3f8d091050e305b89eecb 248 Gene3D G3DSA:3.40.50.10090 122 248 6.2E-20 T 28-03-2018 CO704_RS23255 4f2cf45159a3f8d091050e305b89eecb 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.9E-37 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23255 4f2cf45159a3f8d091050e305b89eecb 248 SUPERFAMILY SSF69618 1 246 5.1E-53 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CO704_RS23255 4f2cf45159a3f8d091050e305b89eecb 248 Gene3D G3DSA:3.40.50.10090 1 121 2.6E-19 T 28-03-2018 CO704_RS02305 656d70460ba2f36d236de29f1bd83dba 536 Pfam PF13454 FAD-NAD(P)-binding 5 164 3.2E-27 T 28-03-2018 CO704_RS02305 656d70460ba2f36d236de29f1bd83dba 536 SUPERFAMILY SSF51905 1 211 2.72E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS02305 656d70460ba2f36d236de29f1bd83dba 536 Gene3D G3DSA:3.50.50.60 2 534 2.2E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10280 a9f998fa4166e768a583797593fbd59c 272 SMART SM00422 4 72 6.7E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS10280 a9f998fa4166e768a583797593fbd59c 272 SUPERFAMILY SSF46955 4 93 1.51E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS10280 a9f998fa4166e768a583797593fbd59c 272 Pfam PF13411 MerR HTH family regulatory protein 5 64 6.5E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS10280 a9f998fa4166e768a583797593fbd59c 272 Gene3D G3DSA:1.10.1660.10 1 102 2.3E-14 T 28-03-2018 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Gene3D G3DSA:3.30.70.1450 320 397 3.2E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 SUPERFAMILY SSF116726 231 295 6.67E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Gene3D G3DSA:3.30.70.1450 217 306 1.8E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Pfam PF02080 TrkA-C domain 231 302 3.3E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Pfam PF02080 TrkA-C domain 326 392 4.8E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Pfam PF03600 Citrate transporter 430 606 9.2E-22 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 Pfam PF03600 Citrate transporter 17 197 5.6E-37 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 SUPERFAMILY SSF116726 321 393 1.44E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CO704_RS06520 dbc91986c98dda18d397b3e4d6183651 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 Gene3D G3DSA:3.30.230.70 1 238 1.4E-59 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.8E-112 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 SUPERFAMILY SSF55666 153 237 6.94E-25 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 6.8E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 SUPERFAMILY SSF54211 1 181 4.15E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.203 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CO704_RS23840 a9cea0eeefab47d2f6a7ac49af78219d 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 7.8E-11 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CO704_RS13195 8a8de8d80d2c064fb100ba05ada66e33 307 SUPERFAMILY SSF103481 43 138 1.77E-12 T 28-03-2018 CO704_RS13195 8a8de8d80d2c064fb100ba05ada66e33 307 Pfam PF00892 EamA-like transporter family 2 135 1.8E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13195 8a8de8d80d2c064fb100ba05ada66e33 307 Pfam PF00892 EamA-like transporter family 151 291 1.3E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13195 8a8de8d80d2c064fb100ba05ada66e33 307 SUPERFAMILY SSF103481 189 293 3.53E-8 T 28-03-2018 CO704_RS12570 3d799b83cab9ce3eed1cd4c624645e76 196 Gene3D G3DSA:2.160.10.10 1 175 1.8E-41 T 28-03-2018 CO704_RS12570 3d799b83cab9ce3eed1cd4c624645e76 196 SUPERFAMILY SSF51161 3 167 1.08E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS12570 3d799b83cab9ce3eed1cd4c624645e76 196 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 191 3.0E-105 T 28-03-2018 IPR011974 Phenylacetic acid degradation protein PaaY CO704_RS12570 3d799b83cab9ce3eed1cd4c624645e76 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.6E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS12570 3d799b83cab9ce3eed1cd4c624645e76 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 2.4E-5 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 Pfam PF01676 Metalloenzyme superfamily 2 398 4.2E-45 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 Gene3D G3DSA:3.40.720.10 268 362 2.8E-5 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 PIRSF PIRSF001491 1 407 5.0E-165 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 5.0E-202 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 SUPERFAMILY SSF53649 237 407 6.94E-69 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 SUPERFAMILY SSF53649 1 114 6.94E-69 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.584 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 SUPERFAMILY SSF143856 117 235 1.83E-49 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS20095 ba5b09375925c639de13eaa15fc4a1aa 407 Gene3D G3DSA:3.30.70.1250 116 235 1.3E-50 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 Pfam PF00005 ABC transporter 44 205 8.6E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 Gene3D G3DSA:3.40.50.300 25 276 3.1E-57 T 28-03-2018 CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 SUPERFAMILY SSF52540 27 266 2.2E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 SMART SM00382 53 274 7.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS02535 d10a4c51c80565040b05dc84b4baf531 280 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 27 273 1.2E-90 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CO704_RS16620 8c826166c9ece26e1f22859ff55b4084 439 SUPERFAMILY SSF74653 352 439 2.55E-22 T 28-03-2018 CO704_RS16620 8c826166c9ece26e1f22859ff55b4084 439 TIGRFAM TIGR02794 tolA_full: protein TolA 12 225 4.2E-43 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CO704_RS16620 8c826166c9ece26e1f22859ff55b4084 439 TIGRFAM TIGR02794 tolA_full: protein TolA 212 439 1.1E-49 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CO704_RS16620 8c826166c9ece26e1f22859ff55b4084 439 Gene3D G3DSA:3.30.1150.10 362 434 5.8E-19 T 28-03-2018 CO704_RS16620 8c826166c9ece26e1f22859ff55b4084 439 Pfam PF06519 TolA C-terminal 343 437 6.6E-36 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CO704_RS00175 38dca3d955b2a4378e07b04d85bd2162 98 SUPERFAMILY SSF143011 1 82 6.93E-23 T 28-03-2018 IPR035095 Toxin RelE-like domain CO704_RS00175 38dca3d955b2a4378e07b04d85bd2162 98 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 87 1.0E-10 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CO704_RS00175 38dca3d955b2a4378e07b04d85bd2162 98 Gene3D G3DSA:3.30.2310.20 1 95 1.6E-25 T 28-03-2018 CO704_RS00175 38dca3d955b2a4378e07b04d85bd2162 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.8E-13 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CO704_RS16690 da0cc3723af0d50d4602dfc34bb3e5df 115 Gene3D G3DSA:1.20.1300.10 1 115 3.1E-18 T 28-03-2018 CO704_RS16690 da0cc3723af0d50d4602dfc34bb3e5df 115 SUPERFAMILY SSF81343 5 115 4.14E-30 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16690 da0cc3723af0d50d4602dfc34bb3e5df 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 8.1E-37 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CO704_RS16690 da0cc3723af0d50d4602dfc34bb3e5df 115 PIRSF PIRSF000169 1 115 2.2E-42 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.3E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 Gene3D G3DSA:3.40.50.1360 73 237 7.2E-40 T 28-03-2018 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 SUPERFAMILY SSF46785 4 59 1.03E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 SMART SM00420 6 58 2.5E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 SMART SM01134 73 234 8.1E-64 T 28-03-2018 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.1E-49 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 SUPERFAMILY SSF100950 75 235 1.74E-32 T 28-03-2018 CO704_RS00110 f96b51141a3517e0f32ee98231523212 253 Gene3D G3DSA:1.10.10.10 1 58 1.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 28-03-2018 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 28-03-2018 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.5E-150 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 8 172 4.3E-42 T 28-03-2018 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 28-03-2018 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 190 255 8.8E-28 T 28-03-2018 CO704_RS01435 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CO704_RS16925 ee782138c51cc0abd093edbaf917a857 156 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 10 115 5.7E-11 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS16925 ee782138c51cc0abd093edbaf917a857 156 Pfam PF05069 Phage virion morphogenesis family 9 150 6.9E-17 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS23215 218033d608a169e5031d948300ed0d75 301 SUPERFAMILY SSF56349 111 294 3.53E-53 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS23215 218033d608a169e5031d948300ed0d75 301 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 298 5.6E-108 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CO704_RS23215 218033d608a169e5031d948300ed0d75 301 Pfam PF00589 Phage integrase family 116 282 2.5E-51 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS23215 218033d608a169e5031d948300ed0d75 301 Gene3D G3DSA:1.10.150.130 2 114 2.3E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS23215 218033d608a169e5031d948300ed0d75 301 SUPERFAMILY SSF47823 9 101 2.12E-10 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CO704_RS23215 218033d608a169e5031d948300ed0d75 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 93 3.8E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CO704_RS23215 218033d608a169e5031d948300ed0d75 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 296 56.572 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CO704_RS23215 218033d608a169e5031d948300ed0d75 301 Gene3D G3DSA:1.10.443.10 115 290 1.5E-43 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 Pfam PF00005 ABC transporter 22 171 8.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 Pfam PF00005 ABC transporter 274 425 1.3E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 Gene3D G3DSA:3.40.50.300 3 246 1.2E-54 T 28-03-2018 CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 Gene3D G3DSA:3.40.50.300 270 504 5.0E-36 T 28-03-2018 CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 SUPERFAMILY SSF52540 5 231 2.02E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 SMART SM00382 31 218 1.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 SMART SM00382 280 474 3.4E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 SUPERFAMILY SSF52540 273 480 2.05E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22430 764ba6ebbdc49ae2e967c837f5cc1ed9 507 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS04135 0030462246cbff84db87199cec7667b3 130 Pfam PF13673 Acetyltransferase (GNAT) domain 15 120 7.6E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS04135 0030462246cbff84db87199cec7667b3 130 Gene3D G3DSA:3.40.630.30 1 130 6.1E-17 T 28-03-2018 CO704_RS04135 0030462246cbff84db87199cec7667b3 130 SUPERFAMILY SSF55729 15 119 3.26E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 SUPERFAMILY SSF51735 8 241 3.48E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 Pfam PF00106 short chain dehydrogenase 14 209 4.0E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 Gene3D G3DSA:3.40.50.720 2 244 1.7E-61 T 28-03-2018 CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0012 T 28-03-2018 CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS10310 0d0d3cbab91c689b516ef3e51625a725 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.3E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15550 e903a012144c28d94ca3c7c569fc8dd8 248 Gene3D G3DSA:3.90.550.10 1 248 7.2E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS15550 e903a012144c28d94ca3c7c569fc8dd8 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.3E-123 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CO704_RS15550 e903a012144c28d94ca3c7c569fc8dd8 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.077 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CO704_RS15550 e903a012144c28d94ca3c7c569fc8dd8 248 Pfam PF02348 Cytidylyltransferase 4 221 1.4E-69 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CO704_RS15550 e903a012144c28d94ca3c7c569fc8dd8 248 SUPERFAMILY SSF53448 3 245 9.39E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 49.868 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 SUPERFAMILY SSF54675 3 136 2.94E-41 T 28-03-2018 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 SUPERFAMILY SSF51690 120 135 3.14E-87 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 SUPERFAMILY SSF51690 166 392 3.14E-87 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 Gene3D G3DSA:3.20.140.10 1 400 8.3E-107 T 28-03-2018 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 3.0E-84 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 PIRSF PIRSF000484 1 397 3.9E-61 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CO704_RS15485 c2bb2f557d376ea44266972ea72c8ab2 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 6.1E-172 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS21900 a0a4dc58e8de7ae928dc2e2b8ed35cda 150 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 24 147 3.4E-50 T 28-03-2018 IPR022262 Lipoprotein, putative CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 Gene3D G3DSA:3.40.605.10 18 284 1.4E-96 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 Gene3D G3DSA:3.40.309.10 285 486 2.2E-66 T 28-03-2018 CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 SUPERFAMILY SSF53720 21 505 4.06E-163 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS00190 5a3797a60acc79741424c6bd3d32658d 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 1.3E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 Gene3D G3DSA:2.40.100.10 13 190 2.1E-52 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 SUPERFAMILY SSF50891 26 189 1.14E-57 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 3.0E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 3.0E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 3.0E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 1.7E-48 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS00950 229f649bbbc95f2e95d3fe5fa170962f 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.4E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.4E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 60 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 Gene3D G3DSA:1.10.10.60 2 48 1.5E-15 T 28-03-2018 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 SUPERFAMILY SSF48498 92 221 2.62E-36 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 3.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 Gene3D G3DSA:1.10.357.10 65 225 3.0E-37 T 28-03-2018 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 Gene3D G3DSA:1.10.357.10 49 64 0.025 T 28-03-2018 CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 Pfam PF09209 Domain of unknown function (DUF1956) 98 220 7.2E-37 T 28-03-2018 IPR015292 Transcription regulator YbiH, C-terminal CO704_RS16380 c0cdb9092bf9e44d88146f7240932a74 231 SUPERFAMILY SSF46689 6 83 1.59E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS09870 37dd6722441894320ef0f2c7f8c4bc8a 302 SUPERFAMILY SSF161098 100 283 1.31E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09870 37dd6722441894320ef0f2c7f8c4bc8a 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 2.5E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09870 37dd6722441894320ef0f2c7f8c4bc8a 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 71 9.3E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CO704_RS09870 37dd6722441894320ef0f2c7f8c4bc8a 302 Gene3D G3DSA:1.10.3720.10 27 291 3.1E-36 T 28-03-2018 CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 SUPERFAMILY SSF116960 1 164 4.32E-69 T 28-03-2018 CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 PIRSF PIRSF006272 1 164 4.6E-79 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 2.0E-88 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 39.356 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 Gene3D G3DSA:1.10.3190.10 54 164 4.5E-43 T 28-03-2018 IPR023146 YfbU, alpha-helical bundle domain CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 Pfam PF03887 YfbU domain 1 164 7.1E-69 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CO704_RS06510 71edff22d11920db0b149ff46268f57b 164 Gene3D G3DSA:1.10.287.680 1 47 3.8E-26 T 28-03-2018 IPR023145 YfbU, helix-hairpin domain CO704_RS08040 e93fbaa4cf122c16f0e6175e04d4e70c 86 Gene3D G3DSA:1.10.260.40 1 70 1.9E-14 T 28-03-2018 CO704_RS08040 e93fbaa4cf122c16f0e6175e04d4e70c 86 SMART SM00530 5 64 2.7E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS08040 e93fbaa4cf122c16f0e6175e04d4e70c 86 SUPERFAMILY SSF47413 2 70 3.1E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS08040 e93fbaa4cf122c16f0e6175e04d4e70c 86 Pfam PF01381 Helix-turn-helix 6 64 5.0E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS17985 129e237028409791b621ab0c7880790d 551 Pfam PF02652 L-lactate permease 16 542 8.3E-230 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CO704_RS17985 129e237028409791b621ab0c7880790d 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 2.0E-237 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 Gene3D G3DSA:3.40.50.1170 1 208 6.7E-80 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 7.1E-135 T 28-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 PIRSF PIRSF001220 1 334 4.4E-95 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.8E-64 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 3.6E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 3.6E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 3.6E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 SMART SM00870 5 323 4.5E-140 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 SUPERFAMILY SSF53774 3 335 1.09E-111 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 Gene3D G3DSA:3.40.50.40 210 337 3.3E-41 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CO704_RS14030 412844886b8fd833db999715505aa9bc 338 PIRSF PIRSF500176 2 332 3.7E-116 T 28-03-2018 CO704_RS14155 b8cd6110f344d58f18ddd0984caaa8bb 396 Gene3D G3DSA:1.20.1250.20 203 392 4.2E-19 T 28-03-2018 CO704_RS14155 b8cd6110f344d58f18ddd0984caaa8bb 396 SUPERFAMILY SSF103473 8 388 3.01E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS14155 b8cd6110f344d58f18ddd0984caaa8bb 396 Gene3D G3DSA:1.20.1250.20 8 187 3.0E-15 T 28-03-2018 CO704_RS14155 b8cd6110f344d58f18ddd0984caaa8bb 396 Pfam PF07690 Major Facilitator Superfamily 20 349 4.0E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Pfam PF13718 GNAT acetyltransferase 2 373 486 7.0E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Gene3D G3DSA:3.40.50.300 141 373 5.7E-9 T 28-03-2018 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Pfam PF08351 Domain of unknown function (DUF1726) 68 150 1.2E-6 T 28-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 20 657 46.185 T 28-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 SUPERFAMILY SSF55729 368 519 2.13E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Gene3D G3DSA:3.40.630.30 374 530 7.1E-15 T 28-03-2018 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Pfam PF05127 Helicase 198 341 1.7E-37 T 28-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 SUPERFAMILY SSF52540 176 289 8.55E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05670 93b5b784c893cfb930c494186f09183c 676 Pfam PF17176 tRNA-binding domain 542 659 2.4E-36 T 28-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 Gene3D G3DSA:3.40.190.10 206 370 1.3E-21 T 28-03-2018 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 Gene3D G3DSA:3.40.190.10 22 205 8.7E-35 T 28-03-2018 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PIRSF PIRSF019574 1 370 1.5E-143 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 Pfam PF13416 Bacterial extracellular solute-binding protein 47 335 8.9E-37 T 28-03-2018 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 4.3E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CO704_RS15870 4db5e01639cfe4833e150a92caf2e79c 370 SUPERFAMILY SSF53850 29 369 1.73E-106 T 28-03-2018 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 9.6E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 9.6E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 9.6E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 9.6E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 SUPERFAMILY SSF52540 4 285 7.1E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.4E-76 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00980 e9b4ba7578c53f707c7c2121ce67e2a5 289 Gene3D G3DSA:3.40.50.300 1 289 1.1E-40 T 28-03-2018 CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 5.4E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 Gene3D G3DSA:3.40.190.10 14 146 3.3E-39 T 28-03-2018 CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 SMART SM00062 26 246 5.3E-73 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 Gene3D G3DSA:3.40.190.10 147 248 7.3E-18 T 28-03-2018 CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 SUPERFAMILY SSF53850 2 245 6.52E-74 T 28-03-2018 CO704_RS15975 3b2d6b9f2dfb3f7181fad675ece0cf2f 248 SMART SM00079 26 245 3.5E-8 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 Pfam PF01555 DNA methylase 21 200 1.4E-32 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 SUPERFAMILY SSF53335 3 207 1.18E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 Gene3D G3DSA:3.40.50.150 2 219 4.8E-42 T 28-03-2018 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 4.2E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 4.2E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 4.2E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 4.2E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CO704_RS21690 3e0d3471ddcbd3540854fb93b658cad4 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 4.2E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 85 104 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 46 65 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 65 85 2.8E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 44 53 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 130 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 104 116 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 156 2.4E-33 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 48 244 5.0E-95 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CO704_RS08390 ae479c71aa71955f97552e1062b660e1 246 Pfam PF00813 FliP family 49 240 1.7E-79 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 49 210 6.8E-30 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 Gene3D G3DSA:1.10.10.60 121 169 5.0E-5 T 28-03-2018 CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 Pfam PF02195 ParB-like nuclease domain 63 135 1.7E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 SMART SM00470 50 137 4.3E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 SUPERFAMILY SSF109709 142 223 7.46E-6 T 28-03-2018 CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 Pfam PF08775 ParB family 193 317 5.9E-38 T 28-03-2018 IPR014884 ParB protein family, C-terminal CO704_RS25935 f759fb210d0c323ed5232d6253b6d189 323 Gene3D G3DSA:3.30.1190.10 170 317 0.0011 T 28-03-2018 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 3.1E-17 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.1E-17 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 3.1E-17 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.1E-17 T 28-03-2018 IPR000362 Fumarate lyase family CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 Gene3D G3DSA:1.10.275.10 1 117 2.6E-43 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 Gene3D G3DSA:1.10.40.30 391 445 3.5E-32 T 28-03-2018 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 SUPERFAMILY SSF48557 10 454 2.67E-105 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.5E-155 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 Pfam PF00206 Lyase 14 312 9.2E-79 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 Gene3D G3DSA:1.20.200.10 118 390 3.7E-82 T 28-03-2018 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 4.5E-53 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CO704_RS14280 0991c595cd1c51a02ef605a6e79b175f 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Pfam PF07732 Multicopper oxidase 55 166 7.4E-29 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Gene3D G3DSA:2.60.40.420 170 412 5.2E-30 T 28-03-2018 IPR008972 Cupredoxin CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Pfam PF07731 Multicopper oxidase 403 529 1.6E-25 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Gene3D G3DSA:2.60.40.420 29 169 4.7E-26 T 28-03-2018 IPR008972 Cupredoxin CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 SUPERFAMILY SSF49503 412 529 2.25E-27 T 28-03-2018 IPR008972 Cupredoxin CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 SUPERFAMILY SSF49503 172 291 1.39E-30 T 28-03-2018 IPR008972 Cupredoxin CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Pfam PF00394 Multicopper oxidase 230 295 6.3E-6 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 ProSitePatterns PS00080 Multicopper oxidases signature 2. 512 523 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 SUPERFAMILY SSF49503 33 167 9.97E-28 T 28-03-2018 IPR008972 Cupredoxin CO704_RS19490 5ddc24e9a885d10caf1c7878014aff49 530 Gene3D G3DSA:2.60.40.420 413 530 2.4E-32 T 28-03-2018 IPR008972 Cupredoxin CO704_RS11910 a0bd83d4dfb4e99f946bd92cc7f54d78 88 Pfam PF03891 Domain of unknown function (DUF333) 42 83 2.4E-14 T 28-03-2018 IPR005590 Protein of unknown function DUF333 CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 Gene3D G3DSA:1.10.10.10 2 76 4.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 SMART SM00895 99 227 5.5E-17 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 Gene3D G3DSA:1.20.120.530 79 245 2.8E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 SUPERFAMILY SSF46785 6 76 3.67E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 SMART SM00345 15 74 3.0E-29 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 SUPERFAMILY SSF48008 95 234 3.14E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS19530 18ee37e7fe172bdfbdfbd8687c3bc726 254 Pfam PF07729 FCD domain 99 226 3.4E-17 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CO704_RS01090 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 Gene3D G3DSA:3.40.50.300 1 242 2.8E-66 T 28-03-2018 CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 Pfam PF00005 ABC transporter 20 170 1.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 SUPERFAMILY SSF52540 3 233 4.33E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 PIRSF PIRSF039085 1 242 1.1E-85 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS15805 07522632d27fb044705bfffcb49d75f7 242 SMART SM00382 27 218 6.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 Gene3D G3DSA:1.20.1560.10 1 324 1.9E-61 T 28-03-2018 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 Pfam PF00005 ABC transporter 356 504 1.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 Pfam PF00664 ABC transporter transmembrane region 27 294 3.2E-42 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 SMART SM00382 365 556 7.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 Gene3D G3DSA:3.40.50.300 325 580 9.2E-67 T 28-03-2018 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 SUPERFAMILY SSF90123 8 322 2.09E-69 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS18115 0c294e87d80fb2dfd55188efbda81526 591 SUPERFAMILY SSF52540 334 575 2.38E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 SMART SM00382 91 383 5.6E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Gene3D G3DSA:3.40.50.300 75 234 6.7E-29 T 28-03-2018 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Gene3D G3DSA:3.40.50.300 252 423 1.4E-44 T 28-03-2018 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 SMART SM00487 74 258 1.6E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 SMART SM00847 463 558 1.0E-37 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1296 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Pfam PF11898 Domain of unknown function (DUF3418) 712 1296 8.8E-238 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 SMART SM00490 303 403 2.1E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Pfam PF04408 Helicase associated domain (HA2) 465 556 1.6E-16 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 621 697 9.7E-19 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 Pfam PF00271 Helicase conserved C-terminal domain 285 402 2.4E-10 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS12560 b42c891aca60a9d00e931ed0f9fc28ec 1299 SUPERFAMILY SSF52540 73 597 8.56E-110 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 Gene3D G3DSA:3.30.750.80 74 180 1.7E-33 T 28-03-2018 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 SMART SM00359 3 88 8.2E-17 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 Gene3D G3DSA:2.30.130.10 4 72 1.3E-26 T 28-03-2018 IPR002478 PUA domain GO:0003723 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 Gene3D G3DSA:3.40.50.150 182 396 8.0E-36 T 28-03-2018 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 69.531 T 28-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 SUPERFAMILY SSF88697 4 72 2.19E-16 T 28-03-2018 IPR015947 PUA-like domain CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 181 371 2.1E-29 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CO704_RS15325 0ff798143feb99cd0a0f3faf39d7a38b 396 SUPERFAMILY SSF53335 79 392 9.83E-72 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS10840 f5c2e7052351ec36a67e1c76fcc56d8b 254 Gene3D G3DSA:3.40.30.10 110 253 3.3E-19 T 28-03-2018 CO704_RS10840 f5c2e7052351ec36a67e1c76fcc56d8b 254 SUPERFAMILY SSF52833 94 251 1.18E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS10840 f5c2e7052351ec36a67e1c76fcc56d8b 254 Pfam PF13098 Thioredoxin-like domain 120 249 8.5E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS10840 f5c2e7052351ec36a67e1c76fcc56d8b 254 Gene3D G3DSA:3.10.450.70 30 92 1.2E-20 T 28-03-2018 CO704_RS10840 f5c2e7052351ec36a67e1c76fcc56d8b 254 SUPERFAMILY SSF54423 26 84 1.57E-17 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CO704_RS11125 49dfb3eb3266316f592644077ac52ef9 403 Gene3D G3DSA:1.20.1250.20 8 209 1.8E-22 T 28-03-2018 CO704_RS11125 49dfb3eb3266316f592644077ac52ef9 403 SUPERFAMILY SSF103473 12 400 1.29E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS11125 49dfb3eb3266316f592644077ac52ef9 403 Pfam PF07690 Major Facilitator Superfamily 42 308 1.0E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS11125 49dfb3eb3266316f592644077ac52ef9 403 Gene3D G3DSA:1.20.1250.20 210 403 2.3E-21 T 28-03-2018 CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 9.9E-60 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 SMART SM00062 27 256 5.9E-77 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 Gene3D G3DSA:3.40.190.10 13 139 7.5E-33 T 28-03-2018 CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 Gene3D G3DSA:3.40.190.10 140 260 4.1E-16 T 28-03-2018 CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 7.5E-99 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CO704_RS06385 500e4d37208dfab4a6363ebfed9d104b 260 SUPERFAMILY SSF53850 27 257 4.64E-63 T 28-03-2018 CO704_RS14430 fc5e3dbc85d740fb641647ea2a706b3a 296 Pfam PF04954 Siderophore-interacting protein 147 293 8.7E-32 T 28-03-2018 IPR007037 Siderophore-interacting protein CO704_RS14430 fc5e3dbc85d740fb641647ea2a706b3a 296 Gene3D G3DSA:2.40.30.10 3 130 3.3E-28 T 28-03-2018 CO704_RS14430 fc5e3dbc85d740fb641647ea2a706b3a 296 SUPERFAMILY SSF63380 9 129 1.68E-9 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS14430 fc5e3dbc85d740fb641647ea2a706b3a 296 Pfam PF08021 Siderophore-interacting FAD-binding domain 14 130 9.2E-35 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CO704_RS14430 fc5e3dbc85d740fb641647ea2a706b3a 296 Gene3D G3DSA:3.40.50.80 140 296 1.8E-33 T 28-03-2018 CO704_RS06960 a38de033732279095cbf52548168ac70 245 SUPERFAMILY SSF52540 3 236 3.79E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06960 a38de033732279095cbf52548168ac70 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06960 a38de033732279095cbf52548168ac70 245 Gene3D G3DSA:3.40.50.300 1 243 1.1E-74 T 28-03-2018 CO704_RS06960 a38de033732279095cbf52548168ac70 245 Pfam PF00005 ABC transporter 19 167 1.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06960 a38de033732279095cbf52548168ac70 245 PIRSF PIRSF039085 1 243 1.5E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS06960 a38de033732279095cbf52548168ac70 245 SMART SM00382 28 215 1.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 Gene3D G3DSA:2.40.50.140 7 103 1.2E-10 T 28-03-2018 CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.596 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 354 1.1E-137 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.3E-32 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.8E-103 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CO704_RS05030 43b66f8deb1f091e6bf872131f3b07c3 461 Gene3D G3DSA:1.10.533.10 104 328 6.3E-5 T 28-03-2018 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 Pfam PF04551 GcpE protein 13 354 1.6E-130 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.687 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.6E-125 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 SUPERFAMILY SSF51717 15 208 1.49E-10 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 SUPERFAMILY SSF56014 265 354 4.36E-10 T 28-03-2018 CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 Gene3D G3DSA:3.20.20.120 20 176 2.0E-18 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS04985 e7ccda8162280f890b698325d0339fb1 373 PIRSF PIRSF004640 1 365 7.6E-147 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CO704_RS21210 2dc341ef5ba91b3f4a58a25d7053f582 98 Pfam PF14189 Domain of unknown function (DUF4312) 6 87 1.7E-35 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 CO704_RS21210 2dc341ef5ba91b3f4a58a25d7053f582 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 5.0E-40 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 CO704_RS04560 c28dc17330ed107cd39c6b0557867aaf 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 52.264 T 28-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 CO704_RS04560 c28dc17330ed107cd39c6b0557867aaf 245 SUPERFAMILY SSF53335 13 190 2.39E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS04560 c28dc17330ed107cd39c6b0557867aaf 245 Pfam PF05175 Methyltransferase small domain 44 130 1.3E-12 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CO704_RS04560 c28dc17330ed107cd39c6b0557867aaf 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS04560 c28dc17330ed107cd39c6b0557867aaf 245 Gene3D G3DSA:3.40.50.150 32 239 3.9E-30 T 28-03-2018 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 Gene3D G3DSA:1.20.1300.10 1 129 3.7E-25 T 28-03-2018 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 4.3E-28 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 SUPERFAMILY SSF81343 2 129 4.58E-34 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 PIRSF PIRSF000178 1 129 6.0E-31 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 4.0E-38 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS16695 310cf21bf77fe5fb0a5a14ee22765eff 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS18655 8412c1d7e8e33c1dfdbae4572616ac43 500 Pfam PF00939 Sodium:sulfate symporter transmembrane region 19 498 7.5E-151 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CO704_RS18655 8412c1d7e8e33c1dfdbae4572616ac43 500 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 495 4.4E-149 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CO704_RS18655 8412c1d7e8e33c1dfdbae4572616ac43 500 PIRSF PIRSF002457 8 500 8.1E-137 T 28-03-2018 IPR030676 Citrate carrier CitT-related CO704_RS20005 af67f4563680ee68a403584b650df52e 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 1.9E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20005 af67f4563680ee68a403584b650df52e 315 Gene3D G3DSA:1.10.3720.10 1 301 6.8E-43 T 28-03-2018 CO704_RS20005 af67f4563680ee68a403584b650df52e 315 SUPERFAMILY SSF161098 91 296 1.96E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.4E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 SUPERFAMILY SSF51735 4 248 1.44E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 Pfam PF00106 short chain dehydrogenase 6 188 3.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS03160 cadddab45e557a3a1c5a6686f082ea5a 278 Gene3D G3DSA:3.40.50.720 2 278 7.8E-65 T 28-03-2018 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 ProSitePatterns PS00150 Acylphosphatase signature 1. 12 22 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 36 52 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 SUPERFAMILY SSF54975 4 95 2.4E-29 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 Pfam PF00708 Acylphosphatase 9 91 3.4E-24 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 PRINTS PR00112 Acylphosphatase signature 63 83 6.3E-7 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 PRINTS PR00112 Acylphosphatase signature 7 22 6.3E-7 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 PRINTS PR00112 Acylphosphatase signature 28 53 6.3E-7 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 Gene3D G3DSA:3.30.70.100 1 95 3.9E-31 T 28-03-2018 CO704_RS15320 34cdc9b7987b99debc4cfbe8003db1ab 95 Hamap MF_01450 Acylphosphatase [yccX]. 4 94 30.055 T 28-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CO704_RS19560 01e6c3854eb115d8c01fc30e69f90a48 459 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 280 294 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CO704_RS19560 01e6c3854eb115d8c01fc30e69f90a48 459 Gene3D G3DSA:3.40.50.300 186 459 1.6E-52 T 28-03-2018 CO704_RS19560 01e6c3854eb115d8c01fc30e69f90a48 459 Gene3D G3DSA:3.30.450.90 50 185 2.9E-40 T 28-03-2018 CO704_RS19560 01e6c3854eb115d8c01fc30e69f90a48 459 Pfam PF00437 Type II/IV secretion system protein 90 352 1.3E-83 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CO704_RS19560 01e6c3854eb115d8c01fc30e69f90a48 459 SUPERFAMILY SSF52540 75 453 6.8E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17355 4726dc569b558ca1e0afa10190cf7fde 278 SUPERFAMILY SSF54001 143 272 8.83E-40 T 28-03-2018 CO704_RS17355 4726dc569b558ca1e0afa10190cf7fde 278 Pfam PF00877 NlpC/P60 family 160 269 1.1E-29 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CO704_RS17355 4726dc569b558ca1e0afa10190cf7fde 278 Gene3D G3DSA:3.90.1720.10 143 277 9.5E-37 T 28-03-2018 CO704_RS04995 80379dd81d3c730dede75e5dcef28739 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 7.9E-58 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CO704_RS04995 80379dd81d3c730dede75e5dcef28739 206 PIRSF PIRSF006170 1 206 9.0E-59 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 CO704_RS04995 80379dd81d3c730dede75e5dcef28739 206 Gene3D G3DSA:1.25.40.10 2 203 2.7E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS04995 80379dd81d3c730dede75e5dcef28739 206 SUPERFAMILY SSF48452 88 184 4.62E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 Pfam PF00326 Prolyl oligopeptidase family 471 676 8.8E-50 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 Gene3D G3DSA:3.40.50.1820 404 678 4.0E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 448 466 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 607 629 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 503 522 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 475 499 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 533 553 6.3E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 SUPERFAMILY SSF53474 418 671 3.37E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 Gene3D G3DSA:2.130.10.120 57 403 6.9E-32 T 28-03-2018 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 SUPERFAMILY SSF50993 13 413 4.18E-41 T 28-03-2018 CO704_RS10560 b82da3ac730a2dac45ebc9f131359fd9 678 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 13 406 2.6E-23 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 PIRSF PIRSF001365 1 292 1.5E-96 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 4.3E-118 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 Gene3D G3DSA:3.20.20.70 1 292 9.4E-93 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 3.2E-124 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 SUPERFAMILY SSF51569 1 292 2.41E-100 T 28-03-2018 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.1E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.1E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.1E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.1E-34 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 SMART SM01130 1 290 7.3E-142 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CO704_RS05650 d1573988386f5a23895e9c5f1a1ca0cf 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.84 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.5E-16 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 Gene3D G3DSA:3.40.50.300 1 214 1.2E-68 T 28-03-2018 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.517 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 SUPERFAMILY SSF52540 1 188 8.25E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.4E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.4E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.4E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.4E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.4E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.6E-76 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CO704_RS05430 f7b5848a871a29a01a858706a64ce0e3 214 Pfam PF00406 Adenylate kinase 5 186 5.2E-61 T 28-03-2018 CO704_RS05560 d2a5c923763b3dc70d6ddc03431fff04 588 SUPERFAMILY SSF52540 88 200 8.97E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05560 d2a5c923763b3dc70d6ddc03431fff04 588 SUPERFAMILY SSF52540 266 559 8.97E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05560 d2a5c923763b3dc70d6ddc03431fff04 588 Gene3D G3DSA:3.40.50.300 41 534 1.7E-30 T 28-03-2018 CO704_RS05560 d2a5c923763b3dc70d6ddc03431fff04 588 Pfam PF01935 Domain of unknown function DUF87 123 417 3.4E-33 T 28-03-2018 IPR002789 Helicase HerA, central domain CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 7.4E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 Pfam PF03466 LysR substrate binding domain 114 316 7.0E-14 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 SUPERFAMILY SSF53850 113 314 8.51E-22 T 28-03-2018 CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 SUPERFAMILY SSF46785 26 106 3.81E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 Gene3D G3DSA:3.40.190.10 201 286 6.8E-8 T 28-03-2018 CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 Gene3D G3DSA:1.10.10.10 24 108 3.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17275 bfed42558a02533750d0f0dbeb3067f4 318 Gene3D G3DSA:3.40.190.10 114 200 7.8E-10 T 28-03-2018 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 Gene3D G3DSA:1.10.520.20 2 106 6.5E-27 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.157 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 7.1E-50 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.0E-64 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 SUPERFAMILY SSF47928 3 102 1.83E-26 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.3E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.3E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24120 be9672ab6306cb99d6ae64333eb577e5 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS16970 674c32cfce8bf5aaa888e6bbaf9ce17a 128 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 11 88 4.7E-8 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CO704_RS12395 674c32cfce8bf5aaa888e6bbaf9ce17a 128 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 11 88 4.7E-8 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CO704_RS10120 674c32cfce8bf5aaa888e6bbaf9ce17a 128 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 11 88 4.7E-8 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CO704_RS03690 576d146141955e95d53e687cffe91b05 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 4.0E-34 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 CO704_RS03690 576d146141955e95d53e687cffe91b05 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 4.0E-46 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 CO704_RS14105 b5e847c86b30a479e676f97182a53f24 141 Gene3D G3DSA:3.40.630.30 9 141 1.1E-15 T 28-03-2018 CO704_RS14105 b5e847c86b30a479e676f97182a53f24 141 SUPERFAMILY SSF55729 42 141 2.13E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS14105 b5e847c86b30a479e676f97182a53f24 141 Pfam PF00583 Acetyltransferase (GNAT) family 43 119 4.9E-5 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS05095 93a9f5ee4b11384c26b4930ea5ef412e 168 Gene3D G3DSA:3.40.50.300 21 167 2.9E-12 T 28-03-2018 CO704_RS05095 93a9f5ee4b11384c26b4930ea5ef412e 168 SUPERFAMILY SSF52540 3 127 1.78E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05095 93a9f5ee4b11384c26b4930ea5ef412e 168 Gene3D G3DSA:3.40.50.300 4 20 0.13 T 28-03-2018 CO704_RS05095 93a9f5ee4b11384c26b4930ea5ef412e 168 Pfam PF13671 AAA domain 5 130 9.1E-14 T 28-03-2018 CO704_RS04305 2d58b4b833b8d01fe700377030687392 70 Gene3D G3DSA:1.10.10.10 9 68 6.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04305 2d58b4b833b8d01fe700377030687392 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 62 3.1E-21 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CO704_RS22265 b29d45f21085d0ee2f71db37340882b4 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.4E-23 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS22265 b29d45f21085d0ee2f71db37340882b4 130 SUPERFAMILY SSF55298 17 126 1.52E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS22265 b29d45f21085d0ee2f71db37340882b4 130 Gene3D G3DSA:3.30.1330.40 15 130 3.1E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS24055 6a6716f3eff9247354dd1fdf035d4a78 139 SUPERFAMILY SSF102546 1 139 6.41E-46 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CO704_RS24055 6a6716f3eff9247354dd1fdf035d4a78 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 8.5E-49 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CO704_RS24055 6a6716f3eff9247354dd1fdf035d4a78 139 Gene3D G3DSA:3.40.1650.10 1 139 6.7E-41 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CO704_RS24055 6a6716f3eff9247354dd1fdf035d4a78 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.894 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 CO704_RS23640 a27505fc9e106fdb3d2c566d29aad417 139 Pfam PF05656 Protein of unknown function (DUF805) 8 132 4.7E-21 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CO704_RS08870 f90f72fe0865dab223e0a274dae29291 261 Pfam PF00950 ABC 3 transport family 2 257 3.5E-86 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CO704_RS08870 f90f72fe0865dab223e0a274dae29291 261 SUPERFAMILY SSF81345 2 257 5.1E-41 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS08870 f90f72fe0865dab223e0a274dae29291 261 Gene3D G3DSA:1.10.3470.10 1 261 7.0E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 SUPERFAMILY SSF47729 1 90 1.91E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 SMART SM00411 1 90 5.3E-42 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 Gene3D G3DSA:4.10.520.10 1 90 3.4E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS18165 3a70a9c1c916599e8bc33f59f2991900 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 Gene3D G3DSA:1.10.10.10 7 87 5.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 Gene3D G3DSA:3.40.190.10 176 263 5.5E-23 T 28-03-2018 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 SUPERFAMILY SSF46785 9 113 5.66E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 Gene3D G3DSA:3.40.190.10 89 175 1.9E-16 T 28-03-2018 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 SUPERFAMILY SSF53850 90 291 1.17E-41 T 28-03-2018 CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 Pfam PF03466 LysR substrate binding domain 89 290 2.4E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS01915 6844e0e0a5990f94fd8c684e464c748e 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 7.7E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00140 3d1fddaa42980fb4c8de581d41715fe2 442 Gene3D G3DSA:1.20.1250.20 250 441 3.2E-20 T 28-03-2018 CO704_RS00140 3d1fddaa42980fb4c8de581d41715fe2 442 Gene3D G3DSA:1.20.1250.20 20 249 3.9E-23 T 28-03-2018 CO704_RS00140 3d1fddaa42980fb4c8de581d41715fe2 442 SUPERFAMILY SSF103473 16 440 1.57E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS00140 3d1fddaa42980fb4c8de581d41715fe2 442 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 31 435 3.4E-113 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CO704_RS00140 3d1fddaa42980fb4c8de581d41715fe2 442 Pfam PF07690 Major Facilitator Superfamily 33 401 1.5E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 SUPERFAMILY SSF52540 4 228 1.31E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 SUPERFAMILY SSF52540 278 495 1.22E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 Gene3D G3DSA:3.40.50.300 261 501 4.7E-39 T 28-03-2018 CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 Pfam PF00005 ABC transporter 22 172 1.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 Pfam PF00005 ABC transporter 282 437 4.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 SMART SM00382 291 486 1.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 SMART SM00382 30 222 1.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02625 a3e43c890348c8e333649f2abdf812ae 515 Gene3D G3DSA:3.40.50.300 2 234 2.3E-50 T 28-03-2018 CO704_RS00235 10f3598f0c3f5218e8427aeb0bfc8c99 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 116 1.1E-30 T 28-03-2018 IPR021230 Protein of unknown function DUF2810 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SUPERFAMILY SSF52172 585 714 9.68E-34 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:3.30.450.20 276 361 3.2E-10 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:3.30.565.10 366 566 4.8E-51 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 453 565 2.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:3.40.190.10 161 228 5.0E-7 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SMART SM00388 340 406 9.6E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SMART SM00062 52 269 3.1E-7 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SUPERFAMILY SSF53850 45 270 1.63E-29 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SUPERFAMILY SSF47384 324 407 3.53E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SMART SM00448 586 704 1.4E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 258 1.2E-17 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:3.40.50.2300 572 711 2.5E-33 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 406 2.5E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 9.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 9.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 9.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 9.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SMART SM00387 452 568 9.6E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SUPERFAMILY SSF47226 687 817 1.2E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Pfam PF01627 Hpt domain 736 800 9.7E-8 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:3.40.190.10 14 160 2.5E-8 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Gene3D G3DSA:1.20.120.160 712 824 1.6E-11 T 28-03-2018 CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 SUPERFAMILY SSF55874 396 565 5.24E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12960 a9b6a9e4636211a49982ec4b3aec7542 826 Pfam PF00072 Response regulator receiver domain 588 704 2.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS02645 40e74deca92fabab90f6d81df5f439ba 296 Pfam PF01261 Xylose isomerase-like TIM barrel 31 243 2.2E-27 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS02645 40e74deca92fabab90f6d81df5f439ba 296 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 3 288 1.5E-128 T 28-03-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 CO704_RS02645 40e74deca92fabab90f6d81df5f439ba 296 SUPERFAMILY SSF51658 5 288 1.23E-57 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS02645 40e74deca92fabab90f6d81df5f439ba 296 Gene3D G3DSA:3.20.20.150 1 293 6.5E-54 T 28-03-2018 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 7 198 3.1E-68 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 28 38 1.6E-28 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 99 114 1.6E-28 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 167 179 1.6E-28 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 119 132 1.6E-28 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 79 92 1.6E-28 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 Gene3D G3DSA:3.30.70.1530 26 92 2.2E-17 T 28-03-2018 CO704_RS16165 20bfe7ef8b9cbb2118ac7b97150d72c1 266 Pfam PF01514 Secretory protein of YscJ/FliF family 15 184 3.5E-29 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF CO704_RS07390 a6ddf20a265ba18c2bdf19cb40536e58 121 Gene3D G3DSA:3.30.2310.20 1 102 9.3E-4 T 28-03-2018 CO704_RS07390 a6ddf20a265ba18c2bdf19cb40536e58 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 106 2.1E-17 T 28-03-2018 IPR009241 Toxin HigB-like CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Gene3D G3DSA:3.30.750.80 394 493 2.8E-9 T 28-03-2018 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 SUPERFAMILY SSF53335 147 217 2.48E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 SUPERFAMILY SSF53335 258 373 2.48E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Pfam PF02926 THUMP domain 21 153 1.4E-18 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Gene3D G3DSA:3.40.50.150 494 704 3.9E-41 T 28-03-2018 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 704 32.757 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.0E-63 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 476 667 2.6E-22 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 SUPERFAMILY SSF53335 398 703 2.99E-71 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 PIRSF PIRSF037618 1 705 2.3E-297 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 Gene3D G3DSA:3.40.50.150 139 382 1.0E-32 T 28-03-2018 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 SMART SM00981 56 154 4.0E-20 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CO704_RS15435 e4fd3b93e4bf4637f1bde007a57b26ca 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 Pfam PF01476 LysM domain 57 93 9.8E-7 T 28-03-2018 IPR018392 LysM domain CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 Gene3D G3DSA:3.10.350.10 49 94 7.2E-8 T 28-03-2018 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 SUPERFAMILY SSF141523 99 155 4.84E-28 T 28-03-2018 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 SUPERFAMILY SSF141523 183 243 4.84E-28 T 28-03-2018 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 Gene3D G3DSA:2.40.440.10 100 244 2.5E-28 T 28-03-2018 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 Pfam PF03734 L,D-transpeptidase catalytic domain 105 242 5.7E-19 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS14415 6cd6cdfeac5d7b2ca6d45c61301bc068 324 SMART SM00257 48 93 5.0E-5 T 28-03-2018 IPR018392 LysM domain CO704_RS03575 962a4afd01dcc24801cfc5c00119c827 155 Pfam PF07670 Nucleoside recognition 29 99 2.0E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 SMART SM00847 388 478 2.4E-12 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 SMART SM00487 2 186 1.5E-21 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 SMART SM00490 226 328 1.3E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Pfam PF00270 DEAD/DEAH box helicase 14 163 4.5E-10 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 PIRSF PIRSF005496 1 811 0.0 T 28-03-2018 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Pfam PF00271 Helicase conserved C-terminal domain 208 327 5.9E-12 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Pfam PF04408 Helicase associated domain (HA2) 389 451 2.6E-10 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Pfam PF08482 ATP-dependent helicase C-terminal 666 798 1.0E-53 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Gene3D G3DSA:3.40.50.300 3 162 2.7E-24 T 28-03-2018 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 810 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 SUPERFAMILY SSF52540 16 430 7.32E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19400 8ca84002858acf82d6c33f91895a215c 811 Gene3D G3DSA:3.40.50.300 180 349 3.0E-43 T 28-03-2018 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 237 257 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 283 309 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 259 279 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 1.4E-24 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Gene3D G3DSA:1.10.220.30 83 206 1.1E-15 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Gene3D G3DSA:1.10.220.30 207 343 9.7E-21 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 SUPERFAMILY SSF48029 21 118 1.96E-15 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Pfam PF14841 FliG middle domain 130 195 1.5E-20 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Gene3D G3DSA:1.10.220.30 20 82 1.4E-7 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 SUPERFAMILY SSF48029 127 335 7.46E-53 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Pfam PF14842 FliG N-terminal domain 20 113 3.9E-21 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CO704_RS17530 9e7275515886115dfc04e47b513b9cf5 344 Pfam PF01706 FliG C-terminal domain 229 334 2.4E-28 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Pfam PF12245 Bacterial Ig-like domain (group 3) 404 424 1.1 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Pfam PF12245 Bacterial Ig-like domain (group 3) 1555 1583 1.3E-4 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Pfam PF12245 Bacterial Ig-like domain (group 3) 1864 1891 2.6 T 28-03-2018 IPR022038 Bacterial Ig-like domain CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3486 3543 1.3E-4 T 28-03-2018 IPR010221 VCBS repeat CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.120.640 3952 4075 5.2E-10 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.500.10 3706 3820 1.3E-7 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.220.10 3424 3555 2.4E-8 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1280 1077 1170 1.8E-10 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4109 4188 1.5E-14 T 28-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 3196 3316 1.1E-16 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1251 1347 8.3E-17 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1454 1557 9.6E-23 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2480 2581 2.1E-22 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1558 1664 2.2E-25 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1972 2076 1.3E-19 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 991 1076 4.8E-15 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 3100 3195 8.9E-16 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2685 2789 7.4E-22 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 803 888 2.4E-16 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2582 2684 5.0E-23 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 322 425 7.8E-17 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2896 2999 2.0E-18 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 613 704 1.3E-18 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 3000 3099 5.8E-19 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 889 990 2.7E-14 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 233 321 1.8E-16 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1665 1767 1.3E-21 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 426 514 5.1E-19 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1171 1250 1.9E-13 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2790 2895 1.3E-19 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2077 2181 1.1E-12 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1880 1971 3.8E-18 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 143 232 1.2E-11 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 515 612 4.9E-17 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 705 802 2.1E-17 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2270 2374 1.0E-24 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2182 2269 6.9E-13 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1768 1879 1.2E-24 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 2375 2479 2.3E-24 T 28-03-2018 CO704_RS04340 5e39e7ef44045dc73d65d0ab6365ae7d 4190 Gene3D G3DSA:2.60.40.1310 1348 1453 1.0E-25 T 28-03-2018 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 Pfam PF02119 Flagellar P-ring protein 21 364 5.7E-135 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 1.6E-87 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS14630 b45005da4c7822dd589bda28a4016b70 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 365 38.744 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17915 d54504c2b8e701b08125fe3e695f2a8f 155 Pfam PF07681 DoxX 33 121 5.3E-16 T 28-03-2018 IPR032808 DoxX family CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 Pfam PF00072 Response regulator receiver domain 9 120 3.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 3.8E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 SMART SM00421 151 208 4.6E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 Gene3D G3DSA:3.40.50.2300 6 131 5.5E-33 T 28-03-2018 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 SUPERFAMILY SSF46894 146 210 4.76E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 SUPERFAMILY SSF52172 8 138 2.28E-33 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 Gene3D G3DSA:1.10.10.10 132 212 2.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 9.0E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 9.0E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 9.0E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS05700 8cd57477ab5788ebce4a254bf8cbd3f7 213 SMART SM00448 7 120 3.5E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 4.6E-119 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 SUPERFAMILY SSF55681 92 327 3.73E-81 T 28-03-2018 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 SUPERFAMILY SSF46589 14 99 1.05E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.971 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 4.8E-107 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.6E-27 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CO704_RS13810 8e428f596380d5421b5949fc6bc6f002 327 Gene3D G3DSA:3.30.930.10 7 327 1.2E-90 T 28-03-2018 CO704_RS06505 c3aea9a76cc384b7ba8ec8c88ea2966e 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.128 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 CO704_RS06505 c3aea9a76cc384b7ba8ec8c88ea2966e 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 3.5E-58 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 CO704_RS12335 b1a5e92ea820506996d9244733fc4e28 557 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 383 516 7.3E-21 T 28-03-2018 IPR006517 Archaeophage PsiM2, terminase large subunit CO704_RS10060 b1a5e92ea820506996d9244733fc4e28 557 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 383 516 7.3E-21 T 28-03-2018 IPR006517 Archaeophage PsiM2, terminase large subunit CO704_RS21285 c9241c20bae3f2b479f7cb672f3d4d78 128 Pfam PF07361 Cytochrome b562 24 128 1.4E-30 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CO704_RS21285 c9241c20bae3f2b479f7cb672f3d4d78 128 Gene3D G3DSA:1.20.120.10 24 128 1.6E-17 T 28-03-2018 CO704_RS21285 c9241c20bae3f2b479f7cb672f3d4d78 128 PIRSF PIRSF000029 1 128 1.0E-51 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CO704_RS21285 c9241c20bae3f2b479f7cb672f3d4d78 128 SUPERFAMILY SSF47175 24 128 1.53E-30 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CO704_RS25405 13ed54a807de84da3a9c921fe73a4cea 208 Pfam PF11140 Protein of unknown function (DUF2913) 15 189 2.0E-35 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 SUPERFAMILY SSF47413 5 69 4.22E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 Pfam PF01381 Helix-turn-helix 18 65 5.5E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 Gene3D G3DSA:1.10.10.60 5 30 1.7E-6 T 28-03-2018 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 Gene3D G3DSA:3.30.1190.10 31 80 1.2E-9 T 28-03-2018 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 SUPERFAMILY SSF51182 59 179 1.09E-19 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 SMART SM00530 11 66 2.5E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS11715 58226e49472c505f1143c3e9cba5f84c 182 Gene3D G3DSA:2.60.120.10 81 181 4.8E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22045 3a2d1806b4b3c8e90e77519fa9913f1f 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 167 3.5E-38 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS22045 3a2d1806b4b3c8e90e77519fa9913f1f 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 13 159 6.1E-27 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 357 1.5E-89 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 Gene3D G3DSA:3.40.50.1970 9 183 2.3E-41 T 28-03-2018 CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 SUPERFAMILY SSF56796 1 385 1.13E-106 T 28-03-2018 CO704_RS02545 6b4232861c8c527a8e8082f6e910d63b 387 Gene3D G3DSA:1.20.1090.10 184 387 7.4E-42 T 28-03-2018 CO704_RS24420 0973fd5125a899b7ddd3cbfbb05db3ed 311 Pfam PF00294 pfkB family carbohydrate kinase 5 305 8.6E-61 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS24420 0973fd5125a899b7ddd3cbfbb05db3ed 311 Gene3D G3DSA:3.40.1190.20 1 311 7.4E-62 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24420 0973fd5125a899b7ddd3cbfbb05db3ed 311 SUPERFAMILY SSF53613 1 308 2.03E-81 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24420 0973fd5125a899b7ddd3cbfbb05db3ed 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS16880 7414832fcdf60f75a2e2da8754ca6a89 129 SUPERFAMILY SSF55166 6 122 1.36E-23 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS16880 7414832fcdf60f75a2e2da8754ca6a89 129 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 56 122 5.6E-14 T 28-03-2018 CO704_RS16880 7414832fcdf60f75a2e2da8754ca6a89 129 Gene3D G3DSA:3.30.1380.10 1 122 3.5E-19 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 Pfam PF00186 Dihydrofolate reductase 1 158 1.7E-59 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 PIRSF PIRSF000194 1 159 6.4E-58 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 2.1E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 2.1E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 2.1E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 2.1E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 SUPERFAMILY SSF53597 1 159 2.1E-56 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS19815 5f7f9c50fc87cd710490d75544ea8a27 159 Gene3D G3DSA:3.40.430.10 1 159 2.0E-53 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS10070 1b458e8d1ee1ee6b8b73c11982f7d97d 421 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 105 185 4.7E-17 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS10070 1b458e8d1ee1ee6b8b73c11982f7d97d 421 Pfam PF04233 Phage Mu protein F like protein 57 184 4.5E-29 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 Pfam PF03061 Thioesterase superfamily 20 103 3.4E-19 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 SUPERFAMILY SSF54637 4 133 8.65E-40 T 28-03-2018 IPR029069 HotDog domain CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 PIRSF PIRSF003230 1 134 1.4E-48 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 Gene3D G3DSA:3.10.129.10 2 134 1.0E-37 T 28-03-2018 CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 7.3E-47 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CO704_RS16635 b5bf8540b0f8e3c7ae34b13eab736945 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 3.2E-50 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 SUPERFAMILY SSF46955 2 121 4.76E-34 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 Gene3D G3DSA:1.10.1660.10 58 138 1.9E-24 T 28-03-2018 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 SMART SM00422 2 71 4.8E-32 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.6E-64 T 28-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 Pfam PF13411 MerR HTH family regulatory protein 2 69 8.3E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 Gene3D G3DSA:1.10.1660.10 1 57 5.9E-24 T 28-03-2018 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.2E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.2E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS01235 4700adb647db83f3f17aa94f90cadb82 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.2E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 PIRSF PIRSF001357 5 255 7.2E-77 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.467 T 28-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 SUPERFAMILY SSF51569 7 246 1.67E-81 T 28-03-2018 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 Gene3D G3DSA:3.20.20.70 1 258 1.3E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 3.3E-50 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 1.5E-84 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS20110 01555d00047cd18cad8e4f4aa803b048 259 SMART SM01133 10 246 6.7E-79 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 4.5E-25 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 468 537 7.2E-11 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 295 463 1.2E-33 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Gene3D G3DSA:1.10.645.10 175 380 1.8E-44 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 SUPERFAMILY SSF143243 9 194 1.83E-45 T 28-03-2018 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 132 1.0E-17 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Gene3D G3DSA:1.10.645.10 381 535 2.7E-29 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 SUPERFAMILY SSF56762 193 537 1.44E-109 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24260 4032a87de1ac9938408b026a08fb90f3 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 6.6E-13 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CO704_RS22170 74fe1d25f86da4de7727b50e2993a882 81 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 66 4.4E-17 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type CO704_RS22170 74fe1d25f86da4de7727b50e2993a882 81 SUPERFAMILY SSF57716 36 71 2.99E-6 T 28-03-2018 CO704_RS22170 74fe1d25f86da4de7727b50e2993a882 81 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 66 1.7E-8 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CO704_RS21840 e051869bb48545bbee39fab2d2b1fc83 502 Pfam PF07916 TraG-like protein, N-terminal region 8 485 3.5E-100 T 28-03-2018 IPR012931 TraG-like, N-terminal CO704_RS20765 a1cf5d77c58db3cbd3d3a9961ed07674 282 Gene3D G3DSA:3.80.10.10 59 220 7.6E-14 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CO704_RS20765 a1cf5d77c58db3cbd3d3a9961ed07674 282 Pfam PF13855 Leucine rich repeat 74 128 6.9E-7 T 28-03-2018 IPR001611 Leucine-rich repeat GO:0005515 CO704_RS20765 a1cf5d77c58db3cbd3d3a9961ed07674 282 SUPERFAMILY SSF52058 73 128 9.18E-11 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 2.3E-119 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 SUPERFAMILY SSF54211 1 158 3.19E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 Pfam PF08544 GHMP kinases C terminal 219 285 1.3E-9 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 Gene3D G3DSA:3.30.230.10 1 165 2.1E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PRINTS PR00958 Homoserine kinase signature 175 192 5.8E-35 T 28-03-2018 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PRINTS PR00958 Homoserine kinase signature 9 24 5.8E-35 T 28-03-2018 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PRINTS PR00958 Homoserine kinase signature 254 269 5.8E-35 T 28-03-2018 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PRINTS PR00958 Homoserine kinase signature 97 112 5.8E-35 T 28-03-2018 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PRINTS PR00958 Homoserine kinase signature 137 150 5.8E-35 T 28-03-2018 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.976 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 2.1E-14 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 Gene3D G3DSA:3.30.70.890 168 309 3.4E-30 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 PIRSF PIRSF000676 1 308 7.3E-86 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CO704_RS19960 003991cd5fe26076d918e5b8393b6ea5 309 SUPERFAMILY SSF55060 172 289 8.35E-34 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 SUPERFAMILY SSF52540 4 236 2.84E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.7E-120 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.3E-8 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 SMART SM00382 28 231 4.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 Gene3D G3DSA:3.40.50.300 1 238 3.6E-63 T 28-03-2018 CO704_RS01635 0d2b79a1020cb3987b37417cc74be699 241 Pfam PF00005 ABC transporter 20 166 3.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 SMART SM00876 259 362 2.1E-28 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.0E-21 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 369 2.6E-163 T 28-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 Pfam PF04055 Radical SAM superfamily 83 220 8.3E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 Gene3D G3DSA:3.20.20.70 17 371 9.3E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS22910 a23fc993b36eac2177899de609f0d42d 377 SUPERFAMILY SSF102114 37 364 7.85E-56 T 28-03-2018 CO704_RS12795 c15001460e6cd8ea1e4c8fed41dd5840 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 4.6E-179 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 CO704_RS12795 c15001460e6cd8ea1e4c8fed41dd5840 325 PIRSF PIRSF034367 1 325 3.0E-187 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 SMART SM00387 409 499 1.1E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 Pfam PF05231 MASE1 13 275 4.5E-12 T 28-03-2018 IPR007895 MASE1 CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 498 7.2E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 SUPERFAMILY SSF55874 375 497 9.82E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 Gene3D G3DSA:3.30.565.10 273 498 7.7E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS02015 aa6006284fca24e6c7a51749279b3580 500 Pfam PF07730 Histidine kinase 305 370 5.5E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 SUPERFAMILY SSF48029 114 322 5.89E-62 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 3 330 1.6E-144 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Gene3D G3DSA:1.10.220.30 66 189 1.5E-21 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Gene3D G3DSA:1.10.220.30 193 330 2.0E-28 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PIRSF PIRSF003161 1 330 2.0E-116 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Pfam PF14841 FliG middle domain 114 186 1.3E-24 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Pfam PF14842 FliG N-terminal domain 3 102 6.1E-30 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 SUPERFAMILY SSF48029 5 103 2.41E-20 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Pfam PF01706 FliG C-terminal domain 218 322 6.3E-37 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 3.8E-74 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CO704_RS08435 65cfe0928d9431dbe250266f33b57331 330 Gene3D G3DSA:1.10.220.30 3 65 3.6E-11 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CO704_RS05655 f435a97b6fa7ec206d2669725b58015b 344 Pfam PF06804 NlpB/DapX lipoprotein 40 342 3.5E-112 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein CO704_RS05655 f435a97b6fa7ec206d2669725b58015b 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 37.762 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC CO704_RS05655 f435a97b6fa7ec206d2669725b58015b 344 PIRSF PIRSF026343 9 344 7.7E-132 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC CO704_RS00720 fc9b2a80146b5e71c311ab2c365d9bb2 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 251 1.3E-104 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CO704_RS00720 fc9b2a80146b5e71c311ab2c365d9bb2 258 Gene3D G3DSA:3.40.50.1820 2 253 3.8E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS00720 fc9b2a80146b5e71c311ab2c365d9bb2 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 6.3E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS00720 fc9b2a80146b5e71c311ab2c365d9bb2 258 SUPERFAMILY SSF53474 4 252 1.07E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS00720 fc9b2a80146b5e71c311ab2c365d9bb2 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.274 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.2E-9 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 7.2E-9 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 7.2E-9 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 8.0E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 Gene3D G3DSA:3.50.50.60 2 143 6.0E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 SUPERFAMILY SSF51905 210 335 5.66E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 SUPERFAMILY SSF51905 1 172 5.66E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.6E-12 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.6E-12 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.6E-12 T 28-03-2018 CO704_RS11475 7b0c5e2319324395a33879293ae2f793 400 Gene3D G3DSA:3.50.50.60 144 377 1.3E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS01050 be5d335c3db211ea48cd72ef148d4666 95 SUPERFAMILY SSF75169 1 95 7.26E-30 T 28-03-2018 IPR027396 DsrEFH-like CO704_RS01050 be5d335c3db211ea48cd72ef148d4666 95 Pfam PF04077 DsrH like protein 8 92 3.4E-29 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CO704_RS01050 be5d335c3db211ea48cd72ef148d4666 95 Gene3D G3DSA:3.40.1260.10 1 93 2.4E-23 T 28-03-2018 CO704_RS01050 be5d335c3db211ea48cd72ef148d4666 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.5E-31 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CO704_RS01050 be5d335c3db211ea48cd72ef148d4666 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 26.969 T 28-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 SUPERFAMILY SSF55604 401 474 2.22E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.0E-83 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.5E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 Gene3D G3DSA:3.30.1360.60 399 474 5.1E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 4.5E-90 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 3.8E-233 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 CO704_RS14510 2622cd2e918450a06bc2ed9dc8a0edf1 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 4.4E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS06585 8e5ee276c4326d8e95686c93cec1b3d0 185 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 6.4E-35 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 SMART SM00382 37 224 1.8E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 PIRSF PIRSF039085 9 252 4.9E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 Gene3D G3DSA:3.40.50.300 9 251 9.3E-76 T 28-03-2018 CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 SUPERFAMILY SSF52540 12 246 2.54E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS01340 3b0b2946b72856794dc57349baa82af1 252 Pfam PF00005 ABC transporter 28 176 1.7E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02175 93331f58fb34389c92727fe643838a68 273 Pfam PF06067 Domain of unknown function (DUF932) 36 261 7.5E-54 T 28-03-2018 IPR026325 Protein of unknown function DUF932 CO704_RS10920 12241294187d7a8abe8e671d94fe34d3 118 SUPERFAMILY SSF52309 1 117 4.76E-36 T 28-03-2018 CO704_RS10920 12241294187d7a8abe8e671d94fe34d3 118 Gene3D G3DSA:3.40.50.10400 1 118 2.2E-19 T 28-03-2018 IPR027269 Hypothetical PA1492 domain CO704_RS10920 12241294187d7a8abe8e671d94fe34d3 118 Pfam PF09152 Domain of unknown function (DUF1937) 2 112 1.1E-42 T 28-03-2018 IPR015235 Domain of unknown function DUF1937 CO704_RS21450 fc10c4ce87bfaccda93e8a5e01bfbc8c 191 Gene3D G3DSA:1.10.10.10 2 166 3.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21450 fc10c4ce87bfaccda93e8a5e01bfbc8c 191 SUPERFAMILY SSF46785 10 91 3.41E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22310 be3a9bffa904bd68f589491fe62e3d5b 787 SUPERFAMILY SSF52540 193 352 1.89E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22310 be3a9bffa904bd68f589491fe62e3d5b 787 SUPERFAMILY SSF52540 64 138 1.89E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22310 be3a9bffa904bd68f589491fe62e3d5b 787 Gene3D G3DSA:3.40.50.300 57 711 1.8E-29 T 28-03-2018 CO704_RS22310 be3a9bffa904bd68f589491fe62e3d5b 787 Pfam PF00350 Dynamin family 80 285 5.6E-17 T 28-03-2018 IPR022812 Dynamin superfamily CO704_RS12695 9d9e027616c1c67fdc2a116135c7085b 109 SUPERFAMILY SSF103481 11 107 8.5E-18 T 28-03-2018 CO704_RS12695 9d9e027616c1c67fdc2a116135c7085b 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 30.5 T 28-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 CO704_RS12695 9d9e027616c1c67fdc2a116135c7085b 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 1.0E-27 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS13840 bcbaddf7609d56bbca3809142f4325cd 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 6.1E-54 T 28-03-2018 IPR007433 Protein of unknown function DUF481 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 SUPERFAMILY SSF51998 121 686 7.94E-198 T 28-03-2018 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 704 1.1E-209 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 Pfam PF03477 ATP cone domain 4 89 3.9E-19 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 704 7.9E-183 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 Gene3D G3DSA:3.20.70.20 121 686 4.8E-209 T 28-03-2018 CO704_RS01910 257db4a6f1020521c3369e91343b3337 711 ProSitePatterns PS00850 Glycine radical domain signature. 675 683 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 Gene3D G3DSA:3.40.50.720 1 124 9.7E-15 T 28-03-2018 CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 SUPERFAMILY SSF51735 99 279 1.34E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 313 64.48 T 28-03-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 Gene3D G3DSA:3.40.50.720 125 279 4.9E-34 T 28-03-2018 CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CO704_RS14875 51e7740bb7061d4dc89e6d7beb2e9ede 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 2.7E-42 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS08890 b0e9b6c786de9726425ef72ae69aacca 326 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 54.531 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CO704_RS08890 b0e9b6c786de9726425ef72ae69aacca 326 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 2.9E-145 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CO704_RS08890 b0e9b6c786de9726425ef72ae69aacca 326 PIRSF PIRSF026649 10 315 5.7E-99 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS08890 b0e9b6c786de9726425ef72ae69aacca 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 306 5.2E-100 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS08395 62729378074fecd8aa1dc727d112cd4d 126 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 121 3.6E-20 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CO704_RS08395 62729378074fecd8aa1dc727d112cd4d 126 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 94 2.6E-20 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CO704_RS07705 e3fa8a8945edceea7dd0be3c2bbd3ca4 275 SUPERFAMILY SSF51735 2 267 8.14E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07705 e3fa8a8945edceea7dd0be3c2bbd3ca4 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 4.7E-9 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS07705 e3fa8a8945edceea7dd0be3c2bbd3ca4 275 Gene3D G3DSA:3.40.50.720 2 270 1.0E-24 T 28-03-2018 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 SUPERFAMILY SSF46689 13 90 8.25E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.9E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 Gene3D G3DSA:1.10.357.10 74 205 4.8E-7 T 28-03-2018 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 Gene3D G3DSA:1.10.10.60 2 73 1.2E-14 T 28-03-2018 CO704_RS12780 99b2779a7d219d62c02a104f2efa4ced 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 1.5E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS08980 e14b918cb95cc1af213e374887f430d4 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 1.0E-31 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS08980 e14b918cb95cc1af213e374887f430d4 76 Gene3D G3DSA:1.20.58.250 3 65 6.9E-32 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS08980 e14b918cb95cc1af213e374887f430d4 76 Pfam PF06440 DNA polymerase III, theta subunit 2 71 9.9E-39 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CO704_RS08980 e14b918cb95cc1af213e374887f430d4 76 SUPERFAMILY SSF46575 1 76 1.11E-35 T 28-03-2018 CO704_RS19455 7998f440b219bc8ea24d1febc6ba6db5 416 Pfam PF01522 Polysaccharide deacetylase 236 374 2.1E-19 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CO704_RS19455 7998f440b219bc8ea24d1febc6ba6db5 416 SUPERFAMILY SSF88713 198 392 3.94E-29 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS19455 7998f440b219bc8ea24d1febc6ba6db5 416 Gene3D G3DSA:3.20.20.370 174 415 6.4E-36 T 28-03-2018 CO704_RS19455 7998f440b219bc8ea24d1febc6ba6db5 416 Gene3D G3DSA:2.40.50.110 104 169 6.4E-7 T 28-03-2018 CO704_RS00890 9de1280cc1adc5fdefb7056cd9b1f876 296 Gene3D G3DSA:3.20.20.140 6 296 1.5E-50 T 28-03-2018 CO704_RS00890 9de1280cc1adc5fdefb7056cd9b1f876 296 PIRSF PIRSF016839 1 296 8.4E-128 T 28-03-2018 CO704_RS00890 9de1280cc1adc5fdefb7056cd9b1f876 296 Pfam PF02126 Phosphotriesterase family 8 295 1.9E-112 T 28-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 CO704_RS00890 9de1280cc1adc5fdefb7056cd9b1f876 296 SUPERFAMILY SSF51556 7 295 1.19E-94 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 SUPERFAMILY SSF56112 94 159 6.46E-50 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 SUPERFAMILY SSF56112 194 438 6.46E-50 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 1.5E-184 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 Gene3D G3DSA:3.30.200.20 103 245 2.0E-19 T 28-03-2018 CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 Pfam PF03109 ABC1 family 116 232 5.1E-35 T 28-03-2018 IPR004147 UbiB domain CO704_RS23115 fd910ff874042a11392eda0e88c3b37c 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.833 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 9.8E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 SMART SM00420 6 58 2.0E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 SUPERFAMILY SSF100950 88 245 3.14E-22 T 28-03-2018 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 Gene3D G3DSA:1.10.10.10 3 58 4.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 Gene3D G3DSA:3.40.50.1360 79 265 1.1E-29 T 28-03-2018 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.4E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.4E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 Pfam PF00455 DeoR C terminal sensor domain 89 245 4.2E-38 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 SUPERFAMILY SSF46785 5 61 8.34E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00125 896b362d20436adc52f80714ba136cdd 266 SMART SM01134 87 247 2.9E-49 T 28-03-2018 CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 Gene3D G3DSA:3.30.1240.10 82 173 5.7E-21 T 28-03-2018 CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 Gene3D G3DSA:3.40.50.1000 174 266 8.6E-19 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 SUPERFAMILY SSF56784 1 262 8.97E-58 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 1.0E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 CO704_RS00375 e7bad24f771d6b55430509a7b84b493c 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 258 3.2E-43 T 28-03-2018 IPR023214 HAD-like domain CO704_RS02230 d5fef9f0125fb7bc8f3ad9cbdc145d68 107 SMART SM00530 14 73 4.5E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS02230 d5fef9f0125fb7bc8f3ad9cbdc145d68 107 Gene3D G3DSA:1.10.260.40 10 107 1.3E-19 T 28-03-2018 CO704_RS02230 d5fef9f0125fb7bc8f3ad9cbdc145d68 107 SUPERFAMILY SSF47413 10 79 6.76E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS02230 d5fef9f0125fb7bc8f3ad9cbdc145d68 107 Pfam PF01381 Helix-turn-helix 15 73 2.6E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 Gene3D G3DSA:3.30.390.10 1 116 1.7E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 SMART SM00922 130 223 4.9E-19 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 SUPERFAMILY SSF51604 117 312 1.97E-50 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 110 7.2E-23 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 Gene3D G3DSA:3.20.20.120 117 321 1.0E-39 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 SUPERFAMILY SSF54826 3 109 6.28E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS10510 6129e327c5c1285be83631b53b2a8ae8 321 Pfam PF13378 Enolase C-terminal domain-like 133 295 1.4E-25 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 Pfam PF07702 UTRA domain 103 238 8.8E-28 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 SUPERFAMILY SSF46785 13 85 9.09E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 SMART SM00866 102 239 4.6E-24 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 Gene3D G3DSA:1.10.10.10 10 81 6.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 SUPERFAMILY SSF64288 72 245 4.4E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 1.7E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 SMART SM00345 23 82 1.5E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 6.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 6.3E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS15830 f1841b0678c0d1ea594ecfa568d4b008 249 Gene3D G3DSA:3.40.1410.10 82 246 1.5E-33 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS15360 ba4c0a5845b065fd0fcb4701258c4c26 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 9 706 0.0 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CO704_RS15360 ba4c0a5845b065fd0fcb4701258c4c26 712 Pfam PF13515 Fusaric acid resistance protein-like 407 526 2.6E-25 T 28-03-2018 CO704_RS15360 ba4c0a5845b065fd0fcb4701258c4c26 712 Pfam PF12805 FUSC-like inner membrane protein yccS 67 346 6.3E-108 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CO704_RS15360 ba4c0a5845b065fd0fcb4701258c4c26 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 9 707 0.0 T 28-03-2018 IPR010019 Integral membrane protein, YccS CO704_RS08475 3fc6dbf55acd0594747a55994f5cd0df 120 Gene3D G3DSA:1.20.58.380 6 89 1.7E-23 T 28-03-2018 CO704_RS08475 3fc6dbf55acd0594747a55994f5cd0df 120 Pfam PF05400 Flagellar protein FliT 21 105 1.8E-22 T 28-03-2018 IPR008622 Flagellar protein FliT CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 Gene3D G3DSA:3.10.180.10 1 135 1.1E-35 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 SUPERFAMILY SSF54593 1 128 3.22E-34 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 1.6E-68 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.1E-25 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS13515 4ad46dacce180b18c3b995ff88727664 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CO704_RS13330 7a543245884a2ef374de3a58d0c3f10e 281 Gene3D G3DSA:1.20.120.20 1 266 5.3E-4 T 28-03-2018 CO704_RS13330 7a543245884a2ef374de3a58d0c3f10e 281 Pfam PF15984 Bacterial collagen, middle region 17 206 7.5E-31 T 28-03-2018 IPR031929 Bacterial collagen-like protein, middle domain CO704_RS25605 c62d99ab6f53b221626e69237805909d 371 SUPERFAMILY SSF160355 67 331 7.06E-59 T 28-03-2018 CO704_RS25605 c62d99ab6f53b221626e69237805909d 371 Gene3D G3DSA:1.10.287.210 216 314 8.2E-22 T 28-03-2018 CO704_RS25605 c62d99ab6f53b221626e69237805909d 371 Gene3D G3DSA:3.30.1890.10 54 215 2.4E-28 T 28-03-2018 CO704_RS25605 c62d99ab6f53b221626e69237805909d 371 Pfam PF02706 Chain length determinant protein 27 125 1.5E-14 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CO704_RS21820 449a3b46e30dcef4ea91b1824f437131 144 Gene3D G3DSA:3.40.630.30 1 129 6.1E-17 T 28-03-2018 CO704_RS21820 449a3b46e30dcef4ea91b1824f437131 144 Pfam PF13508 Acetyltransferase (GNAT) domain 64 123 6.6E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS21820 449a3b46e30dcef4ea91b1824f437131 144 SUPERFAMILY SSF55729 15 132 5.91E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS14975 a687258f86b9d7eb7abf1f2a90d9a50a 277 Pfam PF03239 Iron permease FTR1 family 1 263 1.8E-75 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CO704_RS14975 a687258f86b9d7eb7abf1f2a90d9a50a 277 SUPERFAMILY SSF103473 5 269 1.01E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS14975 a687258f86b9d7eb7abf1f2a90d9a50a 277 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 265 7.5E-100 T 28-03-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 CO704_RS07010 f22d8e4b3d7c03feab23cb37c2ef322f 331 Gene3D G3DSA:3.40.50.2300 20 135 6.6E-17 T 28-03-2018 CO704_RS07010 f22d8e4b3d7c03feab23cb37c2ef322f 331 SUPERFAMILY SSF53822 26 328 2.16E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS07010 f22d8e4b3d7c03feab23cb37c2ef322f 331 Pfam PF13407 Periplasmic binding protein domain 27 298 1.8E-64 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS07010 f22d8e4b3d7c03feab23cb37c2ef322f 331 Gene3D G3DSA:3.40.50.2300 136 331 2.7E-40 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 SUPERFAMILY SSF81301 196 409 5.72E-64 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Pfam PF13291 ACT domain 664 740 6.1E-18 T 28-03-2018 IPR002912 ACT domain CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Pfam PF02824 TGS domain 405 464 2.3E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Pfam PF04607 Region found in RelA / SpoT proteins 251 361 3.4E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 4.1E-184 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 SUPERFAMILY SSF109604 25 207 5.65E-43 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 SUPERFAMILY SSF55021 665 741 3.82E-14 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Gene3D G3DSA:3.10.20.30 399 474 3.1E-24 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 SMART SM00954 251 361 4.7E-65 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Gene3D G3DSA:3.30.70.260 660 741 3.7E-11 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Pfam PF13328 HD domain 46 191 1.0E-37 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 Gene3D G3DSA:3.30.460.10 208 341 9.2E-44 T 28-03-2018 CO704_RS03545 1ef9297228917702987852cc9c9e9de3 743 SUPERFAMILY SSF81271 398 464 1.41E-21 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 PIRSF PIRSF039085 1 240 9.0E-117 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 Gene3D G3DSA:3.40.50.300 1 239 1.7E-78 T 28-03-2018 CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 SMART SM00382 26 213 3.2E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 SUPERFAMILY SSF52540 1 235 1.18E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24815 4d5217c01da8b3e892476d19b401e33d 240 Pfam PF00005 ABC transporter 17 165 1.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 SMART SM00530 10 65 9.7E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 Gene3D G3DSA:2.60.120.10 83 179 8.5E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 Gene3D G3DSA:1.10.260.40 2 81 4.1E-15 T 28-03-2018 CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 Pfam PF01381 Helix-turn-helix 11 63 2.8E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 SUPERFAMILY SSF47413 2 67 4.29E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 Pfam PF07883 Cupin domain 103 169 2.8E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS13055 5babeaefa6ec651a07159f4384f0bc90 179 SUPERFAMILY SSF51182 50 175 1.92E-20 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS22680 1bf0cd257231962476457ec58a1fa2ba 312 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 206 2.9E-47 T 28-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 Gene3D G3DSA:3.40.50.2300 1 131 2.7E-31 T 28-03-2018 CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 SMART SM00862 145 216 1.2E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 Gene3D G3DSA:1.10.10.10 132 220 8.2E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 SMART SM00448 1 112 6.5E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 SUPERFAMILY SSF52172 1 171 4.53E-36 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 Pfam PF00072 Response regulator receiver domain 4 112 3.5E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS01740 6051311123e1e0bc4c313bd9b6e41600 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 9.5E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS00595 4fe35bf1779658ff7d11f731262c84b6 121 Pfam PF10956 Protein of unknown function (DUF2756) 1 101 7.6E-42 T 28-03-2018 IPR020158 Protein of unknown function DUF2756 CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 SUPERFAMILY SSF75420 11 92 2.35E-25 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 Gene3D G3DSA:3.30.300.70 9 89 8.7E-28 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 Pfam PF02576 RimP N-terminal domain 22 92 7.9E-29 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 SUPERFAMILY SSF74942 93 160 1.11E-16 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 Pfam PF17384 RimP C-terminal SH3 domain 95 160 7.8E-23 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 16 160 24.546 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CO704_RS01795 f04ab4e9c85c827ca8883bdff055fa88 160 Gene3D G3DSA:2.30.30.180 97 157 4.6E-18 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CO704_RS02990 868c0e5b7708d3e76d8d4b592da0d95c 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 20 168 1.0E-11 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS02990 868c0e5b7708d3e76d8d4b592da0d95c 194 SUPERFAMILY SSF101327 9 178 2.48E-51 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS02990 868c0e5b7708d3e76d8d4b592da0d95c 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 36.271 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS02990 868c0e5b7708d3e76d8d4b592da0d95c 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 16 178 7.3E-37 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 Pfam PF17152 Periplasmic sensor domain 44 144 4.6E-28 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 244 404 2.9E-35 T 28-03-2018 IPR000160 GGDEF domain CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 6.1E-39 T 28-03-2018 IPR000160 GGDEF domain CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 SMART SM00267 237 407 3.3E-48 T 28-03-2018 IPR000160 GGDEF domain CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 Gene3D G3DSA:3.30.70.270 231 405 3.0E-45 T 28-03-2018 CO704_RS04420 ef6a5e8a15fac8c9a0213e2de46712fb 414 SUPERFAMILY SSF55073 253 403 8.63E-37 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS01615 eafc6f7dda37c7322bcc5b26e65a228d 284 SUPERFAMILY SSF52540 2 151 6.41E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01615 eafc6f7dda37c7322bcc5b26e65a228d 284 Pfam PF03668 P-loop ATPase protein family 1 282 6.6E-146 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CO704_RS01615 eafc6f7dda37c7322bcc5b26e65a228d 284 Gene3D G3DSA:3.40.50.300 1 152 8.5E-12 T 28-03-2018 CO704_RS01615 eafc6f7dda37c7322bcc5b26e65a228d 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.978 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CO704_RS01615 eafc6f7dda37c7322bcc5b26e65a228d 284 PIRSF PIRSF005052 1 284 1.1E-113 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 SUPERFAMILY SSF46785 1 84 3.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 Gene3D G3DSA:1.10.10.10 1 86 4.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.0E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 Gene3D G3DSA:3.40.190.10 91 181 1.7E-14 T 28-03-2018 CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 SUPERFAMILY SSF53850 94 291 3.62E-34 T 28-03-2018 CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 Pfam PF03466 LysR substrate binding domain 93 292 2.1E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS11100 3fb1d236a499743b31c2d2f126d81bed 295 Gene3D G3DSA:3.40.190.10 182 266 3.9E-14 T 28-03-2018 CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 Pfam PF00005 ABC transporter 336 467 1.6E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 Pfam PF00005 ABC transporter 18 184 7.2E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 Gene3D G3DSA:3.40.50.300 3 282 2.3E-51 T 28-03-2018 CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 SMART SM00382 26 228 4.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 SMART SM00382 344 512 8.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 SUPERFAMILY SSF52540 6 237 9.02E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 Pfam PF12848 ABC transporter 224 309 8.4E-21 T 28-03-2018 IPR032781 ABC-transporter extension domain CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 SUPERFAMILY SSF52540 298 523 4.32E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07085 31f82cccf1874d8ea62d6ddb6819e44c 531 Gene3D G3DSA:3.40.50.300 283 530 1.5E-47 T 28-03-2018 CO704_RS16155 a44695f168c5e170140860be846eca10 206 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 26 193 2.9E-24 T 28-03-2018 IPR012842 Type III secretion system HrpE/YscL CO704_RS16155 a44695f168c5e170140860be846eca10 206 Gene3D G3DSA:1.20.5.620 25 48 0.015 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CO704_RS16155 a44695f168c5e170140860be846eca10 206 Gene3D G3DSA:1.20.5.620 49 117 5.0E-4 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CO704_RS16155 a44695f168c5e170140860be846eca10 206 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 39 202 1.4E-30 T 28-03-2018 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 SUPERFAMILY SSF47413 14 56 1.85E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 Pfam PF13464 Domain of unknown function (DUF4115) 253 327 6.4E-24 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 SMART SM00530 18 79 4.7E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 330 43.143 T 28-03-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 Pfam PF13413 Helix-turn-helix domain 18 78 2.3E-15 T 28-03-2018 CO704_RS04980 4642e8c194ac0961455afb706ce2e87e 330 Gene3D G3DSA:1.10.260.40 7 81 6.9E-14 T 28-03-2018 CO704_RS22755 01dd2ba1dd05e67b075241ed168afd56 310 Pfam PF01758 Sodium Bile acid symporter family 37 213 8.2E-40 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 SUPERFAMILY SSF53187 305 381 4.86E-57 T 28-03-2018 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 SUPERFAMILY SSF53187 5 180 4.86E-57 T 28-03-2018 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 6.3E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 SUPERFAMILY SSF55031 181 294 6.43E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.7E-164 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 Gene3D G3DSA:3.30.70.360 184 297 6.1E-21 T 28-03-2018 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 66.609 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 Pfam PF07687 Peptidase dimerisation domain 178 287 2.7E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS23535 97e8a80ca0045cf47b86e7a9ec6f894f 383 Gene3D G3DSA:3.40.630.10 1 183 9.3E-27 T 28-03-2018 CO704_RS05265 e74e2c39c10c5ccb040827bb8905e865 519 SUPERFAMILY SSF141868 274 515 1.83E-75 T 28-03-2018 IPR001633 EAL domain CO704_RS05265 e74e2c39c10c5ccb040827bb8905e865 519 Pfam PF00563 EAL domain 273 501 2.0E-65 T 28-03-2018 IPR001633 EAL domain CO704_RS05265 e74e2c39c10c5ccb040827bb8905e865 519 Gene3D G3DSA:3.20.20.450 270 519 1.7E-80 T 28-03-2018 IPR001633 EAL domain CO704_RS05265 e74e2c39c10c5ccb040827bb8905e865 519 SMART SM00052 267 507 3.0E-92 T 28-03-2018 IPR001633 EAL domain CO704_RS05265 e74e2c39c10c5ccb040827bb8905e865 519 Pfam PF12792 CSS motif domain associated with EAL 38 242 1.0E-35 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 Gene3D G3DSA:3.30.9.10 83 184 3.7E-18 T 28-03-2018 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 Gene3D G3DSA:3.30.9.10 185 320 4.3E-38 T 28-03-2018 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 SUPERFAMILY SSF51905 312 375 5.96E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 SUPERFAMILY SSF51905 1 260 5.96E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 1.1E-27 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 Gene3D G3DSA:3.50.50.60 2 73 0.0092 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 SUPERFAMILY SSF54373 226 319 1.82E-6 T 28-03-2018 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 479 7.7E-16 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CO704_RS00690 14eb7aa9666f9a5f8e01ca4aa0411fa0 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 6.6E-46 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS08730 f655ece6007d880b13506cc58596abf1 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 147 1.3E-23 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CO704_RS08730 f655ece6007d880b13506cc58596abf1 239 SUPERFAMILY SSF49354 24 146 2.01E-24 T 28-03-2018 IPR008962 PapD-like CO704_RS08730 f655ece6007d880b13506cc58596abf1 239 Gene3D G3DSA:2.60.40.10 28 147 4.1E-30 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS07215 a106787cf393d80418beebed3c1213d3 141 SUPERFAMILY SSF55729 2 140 8.92E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS07215 a106787cf393d80418beebed3c1213d3 141 Pfam PF00583 Acetyltransferase (GNAT) family 22 120 5.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS07215 a106787cf393d80418beebed3c1213d3 141 Gene3D G3DSA:3.40.630.30 1 141 7.7E-22 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Gene3D G3DSA:3.40.50.10750 534 682 8.6E-65 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Pfam PF07085 DRTGG domain 233 344 6.9E-30 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 SUPERFAMILY SSF53659 392 709 3.29E-94 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Pfam PF13500 AAA domain 3 229 5.4E-50 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Gene3D G3DSA:3.40.50.20 397 533 0.29 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 8.9E-138 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 PIRSF PIRSF006107 1 713 0.0 T 28-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Gene3D G3DSA:3.40.1390.20 230 366 6.0E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Gene3D G3DSA:3.40.50.300 1 229 2.5E-27 T 28-03-2018 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 2.5E-128 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 SUPERFAMILY SSF75138 229 352 4.45E-26 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CO704_RS06495 9569add7a49400bdfa0b3bbf9bf2ae94 713 SUPERFAMILY SSF52540 3 240 6.9E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 238 8.3E-55 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 Gene3D G3DSA:3.20.20.70 11 242 4.1E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 SUPERFAMILY SSF51366 14 240 1.16E-76 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 SMART SM00934 16 237 3.0E-99 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 236 3.5E-51 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS10365 50e6ee6f617d05844bdcec6c639652b7 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.927 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CO704_RS11890 2010d167faee88a58dad37e3dc0053b4 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 63 6.0E-19 T 28-03-2018 CO704_RS11890 2010d167faee88a58dad37e3dc0053b4 63 Pfam PF13617 YnbE-like lipoprotein 7 61 2.3E-30 T 28-03-2018 IPR025985 YnbE-like lipoprotein CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 215 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 234 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 247 267 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 186 4.2E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 Pfam PF00106 short chain dehydrogenase 51 239 2.5E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 51 232 0.0031 T 28-03-2018 CO704_RS25855 61135162df39b2829407babec26f4e1a 285 Gene3D G3DSA:3.40.50.720 209 273 1.3E-10 T 28-03-2018 CO704_RS25855 61135162df39b2829407babec26f4e1a 285 Gene3D G3DSA:3.40.50.720 47 208 2.2E-45 T 28-03-2018 CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 2.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS25855 61135162df39b2829407babec26f4e1a 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 183 211 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS25855 61135162df39b2829407babec26f4e1a 285 SUPERFAMILY SSF51735 46 269 1.24E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06250 08acab3af88b93e6fe7f64c3dfc09a35 456 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 456 5.5E-145 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CO704_RS06250 08acab3af88b93e6fe7f64c3dfc09a35 456 Gene3D G3DSA:2.40.160.60 28 456 3.3E-86 T 28-03-2018 CO704_RS06250 08acab3af88b93e6fe7f64c3dfc09a35 456 SUPERFAMILY SSF56935 28 456 1.19E-111 T 28-03-2018 CO704_RS16450 32507f07daa52f6b03eb40c5a4aecabc 236 Pfam PF00005 ABC transporter 19 165 9.4E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS16450 32507f07daa52f6b03eb40c5a4aecabc 236 SMART SM00382 26 215 1.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16450 32507f07daa52f6b03eb40c5a4aecabc 236 Gene3D G3DSA:3.40.50.300 1 228 1.8E-44 T 28-03-2018 CO704_RS16450 32507f07daa52f6b03eb40c5a4aecabc 236 SUPERFAMILY SSF52540 2 227 9.55E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10795 934edda791440930f4990074d114e4fc 533 Gene3D G3DSA:1.20.120.30 56 188 8.7E-24 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CO704_RS10795 934edda791440930f4990074d114e4fc 533 Gene3D G3DSA:1.10.287.950 189 323 9.2E-4 T 28-03-2018 CO704_RS10795 934edda791440930f4990074d114e4fc 533 SUPERFAMILY SSF58104 260 531 5.62E-50 T 28-03-2018 CO704_RS10795 934edda791440930f4990074d114e4fc 533 Gene3D G3DSA:1.10.287.950 324 533 4.1E-41 T 28-03-2018 CO704_RS10795 934edda791440930f4990074d114e4fc 533 Pfam PF02203 Tar ligand binding domain homologue 26 184 9.8E-28 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS10795 934edda791440930f4990074d114e4fc 533 SMART SM00283 283 530 1.8E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 496 3.4E-36 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 SUPERFAMILY SSF47170 47 189 5.89E-35 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS10795 934edda791440930f4990074d114e4fc 533 SMART SM00319 62 194 2.6E-4 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 203 223 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 78 93 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 23 48 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS10795 934edda791440930f4990074d114e4fc 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 2.0E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS17780 418eb122b563231716d3cad2e159a212 347 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 84 227 1.4E-13 T 28-03-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ CO704_RS12485 73de189fed0d78d22e9270022c4b79fd 88 Pfam PF05488 PAAR motif 12 75 3.0E-8 T 28-03-2018 IPR008727 PAAR motif CO704_RS01285 00cd32c92f96674b32b13a8c9eb87a58 190 Pfam PF01300 Telomere recombination 16 190 2.4E-42 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CO704_RS01285 00cd32c92f96674b32b13a8c9eb87a58 190 Gene3D G3DSA:3.90.870.10 1 188 9.5E-50 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS01285 00cd32c92f96674b32b13a8c9eb87a58 190 SUPERFAMILY SSF55821 5 187 8.55E-55 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CO704_RS01285 00cd32c92f96674b32b13a8c9eb87a58 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.581 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CO704_RS10810 ec4bd85053db27536787431987958743 330 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 329 2.3E-47 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10810 ec4bd85053db27536787431987958743 330 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 326 2.8E-43 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10810 ec4bd85053db27536787431987958743 330 Gene3D G3DSA:3.30.70.270 153 330 3.4E-51 T 28-03-2018 CO704_RS10810 ec4bd85053db27536787431987958743 330 SUPERFAMILY SSF55073 177 328 2.12E-43 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10810 ec4bd85053db27536787431987958743 330 Pfam PF05230 MASE2 domain 1 87 1.6E-29 T 28-03-2018 IPR007894 MASE2 CO704_RS10810 ec4bd85053db27536787431987958743 330 SMART SM00267 159 330 9.5E-56 T 28-03-2018 IPR000160 GGDEF domain CO704_RS03380 4f226816d2fb903618a3aba17f7655d9 113 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 5.2E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS03380 4f226816d2fb903618a3aba17f7655d9 113 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 2.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CO704_RS03380 4f226816d2fb903618a3aba17f7655d9 113 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 35 106 8.0E-19 T 28-03-2018 IPR022204 Prepilin peptidase dependent protein C CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 Gene3D G3DSA:1.10.10.60 6 67 3.4E-16 T 28-03-2018 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.7E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.7E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 SUPERFAMILY SSF48498 90 202 3.5E-23 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 SUPERFAMILY SSF46689 11 83 1.44E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 Gene3D G3DSA:1.10.357.10 68 196 4.9E-24 T 28-03-2018 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 2.1E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS00305 f840b1fb5b3ac5ffce2facea687ba24d 206 Pfam PF16925 Bacterial transcriptional repressor C-terminal 89 201 2.5E-27 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS16150 b632f28da2680592e92406619da6b7ec 76 Pfam PF06266 HrpF protein 1 76 1.6E-8 T 28-03-2018 IPR009371 Type III secretion protein HrpF CO704_RS01705 5095e2e741b84d110b5361093e5651f4 87 Gene3D G3DSA:1.10.260.40 1 73 3.4E-13 T 28-03-2018 CO704_RS01705 5095e2e741b84d110b5361093e5651f4 87 SUPERFAMILY SSF47413 2 71 8.44E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS01705 5095e2e741b84d110b5361093e5651f4 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 5.8E-36 T 28-03-2018 CO704_RS09440 576b231cfdea8d8b99a197c9fa2fed85 184 Gene3D G3DSA:2.60.120.10 7 106 2.4E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS09440 576b231cfdea8d8b99a197c9fa2fed85 184 Pfam PF05962 HutD 9 168 2.9E-46 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CO704_RS09440 576b231cfdea8d8b99a197c9fa2fed85 184 SUPERFAMILY SSF51182 1 182 1.21E-48 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS09440 576b231cfdea8d8b99a197c9fa2fed85 184 Gene3D G3DSA:2.60.120.10 107 182 1.2E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 SMART SM00382 35 217 2.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 Pfam PF00005 ABC transporter 29 172 7.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 Gene3D G3DSA:3.40.50.300 17 234 1.4E-44 T 28-03-2018 CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 ProSitePatterns PS00211 ABC transporters family signature. 213 227 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15075 e0fa51d54c12e514c104370ac1bcb943 263 SUPERFAMILY SSF52540 29 230 1.43E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09825 19c1a9eade239c612a5fdbb2abe2a841 337 Gene3D G3DSA:3.40.50.2300 5 295 9.4E-35 T 28-03-2018 CO704_RS09825 19c1a9eade239c612a5fdbb2abe2a841 337 SUPERFAMILY SSF52172 7 167 1.08E-33 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS09825 19c1a9eade239c612a5fdbb2abe2a841 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 54.518 T 28-03-2018 IPR028616 Regulator of RpoS CO704_RS09825 19c1a9eade239c612a5fdbb2abe2a841 337 SMART SM00448 8 120 3.0E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS09825 19c1a9eade239c612a5fdbb2abe2a841 337 Pfam PF00072 Response regulator receiver domain 10 119 1.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 Gene3D G3DSA:3.20.20.70 1 289 5.5E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 SUPERFAMILY SSF51569 184 312 2.44E-84 T 28-03-2018 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 SUPERFAMILY SSF51569 2 157 2.44E-84 T 28-03-2018 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 Gene3D G3DSA:3.90.1210.10 293 357 6.2E-20 T 28-03-2018 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 SUPERFAMILY SSF51269 295 356 3.77E-18 T 28-03-2018 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 1.4E-151 T 28-03-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 CO704_RS07555 0f57a45e9c05fa5f10f39d6a11d6fbe6 357 Pfam PF03102 NeuB family 22 289 3.0E-101 T 28-03-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 Pfam PF01687 Riboflavin kinase 184 306 1.4E-37 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.1E-118 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 PIRSF PIRSF004491 1 310 1.9E-106 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 Gene3D G3DSA:2.40.30.30 180 310 3.9E-40 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 Pfam PF06574 FAD synthetase 12 167 9.5E-59 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 Gene3D G3DSA:3.40.50.620 1 179 1.2E-51 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 SUPERFAMILY SSF52374 15 178 1.44E-36 T 28-03-2018 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 SMART SM00904 183 307 2.8E-61 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CO704_RS19885 7755208d9730f3e9db4ae5006621f8e2 310 SUPERFAMILY SSF82114 174 307 3.49E-43 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 SUPERFAMILY SSF50993 2 406 9.68E-79 T 28-03-2018 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 Gene3D G3DSA:3.40.50.1820 1 676 1.7E-76 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 Pfam PF00326 Prolyl oligopeptidase family 463 675 8.9E-68 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 4.4E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 5.1E-105 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CO704_RS08965 cd7c36ef2c05f3e99494637885c1fc24 685 SUPERFAMILY SSF53474 414 655 3.42E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS14605 738a4090b0a69272f2e5c073dffa03d7 118 PIRSF PIRSF020632 1 115 9.2E-49 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR CO704_RS14605 738a4090b0a69272f2e5c073dffa03d7 118 Gene3D G3DSA:2.60.120.10 4 106 2.4E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS14605 738a4090b0a69272f2e5c073dffa03d7 118 Pfam PF09313 Domain of unknown function (DUF1971) 12 93 2.4E-25 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CO704_RS14605 738a4090b0a69272f2e5c073dffa03d7 118 SUPERFAMILY SSF51197 1 101 3.3E-33 T 28-03-2018 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 Gene3D G3DSA:3.30.54.10 265 308 7.2E-9 T 28-03-2018 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 Gene3D G3DSA:3.30.54.10 186 246 4.8E-31 T 28-03-2018 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 11 308 1.2E-145 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 Gene3D G3DSA:3.50.14.10 7 185 9.5E-56 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 3.4E-132 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 SUPERFAMILY SSF56596 5 307 1.14E-113 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CO704_RS13245 40bc91452169141c7878cf84d9f4d5b2 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 49.759 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 Pfam PF00575 S1 RNA binding domain 38 109 2.1E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 SUPERFAMILY SSF50249 39 128 6.95E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.0E-177 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 Gene3D G3DSA:2.40.50.140 32 127 1.7E-30 T 28-03-2018 CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 SMART SM00316 37 122 2.3E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 CO704_RS01455 93851408d66fad6cd745cbbbd0218370 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.8E-102 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 Gene3D G3DSA:3.90.1170.10 1 136 1.3E-50 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-59 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.251 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 SUPERFAMILY SSF54686 3 133 4.32E-55 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.9E-47 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01130 9f35cbf385575a68bf36bace88078783 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS00430 8426b7c27baec399d83ee55e243b42b8 185 Gene3D G3DSA:3.40.1000.10 43 185 2.6E-16 T 28-03-2018 CO704_RS00430 8426b7c27baec399d83ee55e243b42b8 185 Pfam PF08786 DcrB 51 181 4.3E-30 T 28-03-2018 IPR014894 Protein DcrB CO704_RS09180 5050c14d13a5f9ae990babbaed225c6e 114 Gene3D G3DSA:3.30.1330.40 2 114 8.1E-24 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS09180 5050c14d13a5f9ae990babbaed225c6e 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 28-03-2018 IPR019897 RidA, conserved site CO704_RS09180 5050c14d13a5f9ae990babbaed225c6e 114 SUPERFAMILY SSF55298 3 114 6.91E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS09180 5050c14d13a5f9ae990babbaed225c6e 114 Pfam PF01042 Endoribonuclease L-PSP 4 114 3.7E-28 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 425 8.2E-202 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 3.1E-50 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 341 423 1.3E-26 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 SUPERFAMILY SSF142984 250 332 1.7E-20 T 28-03-2018 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 SMART SM00928 338 383 2.0E-21 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 351 362 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 SUPERFAMILY SSF140490 336 427 3.4E-31 T 28-03-2018 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 SUPERFAMILY SSF142019 13 242 7.72E-86 T 28-03-2018 CO704_RS06565 44a2ee207b240d51326db03196bd9582 448 Pfam PF10531 SLBB domain 255 297 5.2E-7 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 Gene3D G3DSA:2.30.110.10 17 218 1.5E-71 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 PIRSF PIRSF000190 1 218 1.7E-85 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 SUPERFAMILY SSF50475 21 218 3.74E-69 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 218 2.9E-98 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 8.2E-19 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.449 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS13410 5d80da1456d29c428766a34595f5bc2e 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 122 6.5E-26 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS14745 e6fdada8e6588211073be592b8beb37c 184 Gene3D G3DSA:1.20.950.20 1 183 5.8E-32 T 28-03-2018 CO704_RS14745 e6fdada8e6588211073be592b8beb37c 184 Pfam PF01292 Prokaryotic cytochrome b561 9 180 6.2E-28 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS14745 e6fdada8e6588211073be592b8beb37c 184 SUPERFAMILY SSF81342 4 181 4.55E-37 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Gene3D G3DSA:3.30.930.10 2 252 7.9E-117 T 28-03-2018 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Pfam PF01411 tRNA synthetases class II (A) 7 556 4.2E-237 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 SUPERFAMILY SSF55681 4 255 2.29E-107 T 28-03-2018 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 6.2E-17 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 SUPERFAMILY SSF55186 552 708 2.22E-52 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 208.381 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 SMART SM00863 653 696 6.7E-21 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.6E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.6E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.6E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.6E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.6E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 SUPERFAMILY SSF50447 455 552 3.54E-20 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 SUPERFAMILY SSF101353 256 465 8.24E-62 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Gene3D G3DSA:3.30.980.10 553 713 1.7E-47 T 28-03-2018 CO704_RS03855 8b1d657ff1910fc4224265c783776557 875 Pfam PF02272 DHHA1 domain 732 871 8.4E-31 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CO704_RS08700 009540caae310e56286189ae9366577f 296 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CO704_RS08700 009540caae310e56286189ae9366577f 296 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 3.4E-11 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CO704_RS08700 009540caae310e56286189ae9366577f 296 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.2E-117 T 28-03-2018 IPR022522 Flagellar motor stator, MotA CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 Gene3D G3DSA:1.10.10.10 8 82 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 Pfam PF07729 FCD domain 106 225 1.2E-8 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 SUPERFAMILY SSF48008 102 227 2.88E-7 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 3.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 8.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 8.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 Gene3D G3DSA:1.20.120.530 95 236 3.8E-12 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 SMART SM00345 20 81 2.7E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 SMART SM00895 105 226 0.0027 T 28-03-2018 IPR011711 GntR, C-terminal CO704_RS06055 151e38ab3f4cb697a8d454ee96f0a792 239 SUPERFAMILY SSF46785 10 85 8.13E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 Gene3D G3DSA:3.40.1280.10 74 243 1.6E-57 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 PIRSF PIRSF015601 3 242 1.1E-52 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 SUPERFAMILY SSF88697 2 68 2.98E-17 T 28-03-2018 IPR015947 PUA-like domain CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 Pfam PF04452 RNA methyltransferase 19 236 2.7E-74 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 Gene3D G3DSA:2.40.240.20 1 73 1.1E-22 T 28-03-2018 CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 7.0E-89 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS02820 a38c7c26eefd6072d61a5814bdbbbc65 243 SUPERFAMILY SSF75217 75 242 3.87E-52 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS09410 ebd9178164d01a84bca011f0e7a31520 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 214 2.4E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09410 ebd9178164d01a84bca011f0e7a31520 226 SUPERFAMILY SSF161098 14 206 7.72E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09410 ebd9178164d01a84bca011f0e7a31520 226 Gene3D G3DSA:1.10.3720.10 1 217 6.9E-29 T 28-03-2018 CO704_RS15735 5336c19187743ccca149febddedc0c99 315 Pfam PF04393 Protein of unknown function (DUF535) 34 312 1.5E-94 T 28-03-2018 IPR007488 Protein of unknown function DUF535 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 SUPERFAMILY SSF103088 216 339 3.79E-35 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 Gene3D G3DSA:2.40.160.20 9 211 6.5E-45 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 SUPERFAMILY SSF56925 22 198 1.2E-41 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01021 OMPA domain signature 260 275 3.1E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01021 OMPA domain signature 228 250 3.1E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01021 OMPA domain signature 275 291 3.1E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 Pfam PF01389 OmpA-like transmembrane domain 23 199 7.9E-73 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 Pfam PF00691 OmpA family 227 318 2.5E-22 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 Gene3D G3DSA:3.30.1330.60 212 350 5.2E-40 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 284 303 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 216 231 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 245 264 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 318 331 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 111 127 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 169 183 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 PRINTS PR01022 Outer membrane protein A signature 183 197 7.2E-69 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CO704_RS15375 e735912d2c370fe4e99feecd9782137b 351 ProSitePatterns PS01068 OmpA-like domain. 262 306 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.3E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 SMART SM00866 86 225 6.8E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 Gene3D G3DSA:1.10.10.10 1 67 3.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 SUPERFAMILY SSF46785 2 75 7.14E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 Pfam PF07702 UTRA domain 86 224 1.7E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 SUPERFAMILY SSF64288 53 233 2.83E-46 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 Gene3D G3DSA:3.40.1410.10 68 233 1.7E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 SMART SM00345 6 65 2.1E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 4.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS24785 8dff6b715d38d3800470aa9a750ad86a 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 4.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS12130 d4b8c2b4cf9474613a4411be6c8a6911 178 Gene3D G3DSA:1.20.950.20 1 178 4.6E-25 T 28-03-2018 CO704_RS12130 d4b8c2b4cf9474613a4411be6c8a6911 178 SUPERFAMILY SSF81342 3 175 3.45E-25 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS12130 d4b8c2b4cf9474613a4411be6c8a6911 178 Pfam PF01292 Prokaryotic cytochrome b561 5 173 7.0E-21 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS17000 a2d696782974622d76dcdf89e09ee111 115 Pfam PF07409 Phage protein GP46 41 108 1.8E-14 T 28-03-2018 IPR010877 Bacteriophage Mu, Gp46 CO704_RS17000 a2d696782974622d76dcdf89e09ee111 115 SUPERFAMILY SSF160719 20 102 8.37E-6 T 28-03-2018 CO704_RS17000 a2d696782974622d76dcdf89e09ee111 115 Gene3D G3DSA:3.10.450.40 13 115 1.2E-6 T 28-03-2018 CO704_RS10150 a2d696782974622d76dcdf89e09ee111 115 Pfam PF07409 Phage protein GP46 41 108 1.8E-14 T 28-03-2018 IPR010877 Bacteriophage Mu, Gp46 CO704_RS10150 a2d696782974622d76dcdf89e09ee111 115 SUPERFAMILY SSF160719 20 102 8.37E-6 T 28-03-2018 CO704_RS10150 a2d696782974622d76dcdf89e09ee111 115 Gene3D G3DSA:3.10.450.40 13 115 1.2E-6 T 28-03-2018 CO704_RS12425 a2d696782974622d76dcdf89e09ee111 115 Pfam PF07409 Phage protein GP46 41 108 1.8E-14 T 28-03-2018 IPR010877 Bacteriophage Mu, Gp46 CO704_RS12425 a2d696782974622d76dcdf89e09ee111 115 SUPERFAMILY SSF160719 20 102 8.37E-6 T 28-03-2018 CO704_RS12425 a2d696782974622d76dcdf89e09ee111 115 Gene3D G3DSA:3.10.450.40 13 115 1.2E-6 T 28-03-2018 CO704_RS09235 8d093d7537efb9207421629c22be104f 219 SUPERFAMILY SSF56529 11 213 1.44E-69 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS09235 8d093d7537efb9207421629c22be104f 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 210 4.5E-53 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS09235 8d093d7537efb9207421629c22be104f 219 Gene3D G3DSA:3.90.850.10 10 218 7.2E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 Pfam PF00106 short chain dehydrogenase 3 193 2.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 SUPERFAMILY SSF51735 3 200 7.08E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 SUPERFAMILY SSF51735 232 248 7.08E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11180 3b1f078f2c345624df30d2470ec00f48 298 Gene3D G3DSA:3.40.50.720 2 297 3.6E-51 T 28-03-2018 CO704_RS12705 08c1a445aeb8df0cbb7cea575c28c126 344 Pfam PF01594 AI-2E family transporter 14 328 3.2E-71 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 Pfam PF00664 ABC transporter transmembrane region 26 292 5.3E-50 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 SUPERFAMILY SSF90123 13 331 3.92E-54 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 Gene3D G3DSA:1.20.1560.10 9 335 3.6E-43 T 28-03-2018 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 SMART SM00382 375 560 4.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 5.7E-193 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 SUPERFAMILY SSF52540 363 581 9.04E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 Gene3D G3DSA:3.40.50.300 336 588 2.6E-61 T 28-03-2018 CO704_RS15685 acd1a9d169b9b99fcfa038b20cf91ef6 588 Pfam PF00005 ABC transporter 369 513 1.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 SMART SM00945 5 119 1.8E-59 T 28-03-2018 IPR016103 ProQ/FinO domain CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 Gene3D G3DSA:1.10.1710.10 1 121 5.0E-41 T 28-03-2018 IPR016103 ProQ/FinO domain CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 Pfam PF17516 ProQ C-terminal domain 177 227 6.8E-26 T 28-03-2018 IPR035236 RNA chaperone ProQ, C-terminal CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 SUPERFAMILY SSF48657 5 119 8.63E-40 T 28-03-2018 IPR016103 ProQ/FinO domain CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 227 29.944 T 28-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CO704_RS09045 4afa3a18810e58e022a18ea54f688155 227 Pfam PF04352 ProQ/FINO family 8 115 8.9E-43 T 28-03-2018 IPR016103 ProQ/FinO domain CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 Pfam PF00005 ABC transporter 26 174 3.1E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 Gene3D G3DSA:3.40.50.300 2 232 1.0E-65 T 28-03-2018 CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 SMART SM00382 35 223 4.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 SUPERFAMILY SSF52540 6 226 1.9E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14395 413c9fc3e5947754a63e93c0454a519a 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 1.4E-112 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CO704_RS11525 ccf1f6807a16da70b3501cfdf84fe479 331 Gene3D G3DSA:3.30.1780.10 1 138 4.3E-31 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 CO704_RS11525 ccf1f6807a16da70b3501cfdf84fe479 331 SUPERFAMILY SSF51735 1 322 9.94E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11525 ccf1f6807a16da70b3501cfdf84fe479 331 PIRSF PIRSF001439 1 324 1.7E-67 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CO704_RS11525 ccf1f6807a16da70b3501cfdf84fe479 331 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 19 314 1.6E-29 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 CO704_RS11525 ccf1f6807a16da70b3501cfdf84fe479 331 Gene3D G3DSA:3.40.50.720 139 296 2.4E-14 T 28-03-2018 CO704_RS24660 8fbbac121f2653c5dd58b52c308cd248 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 4.5E-38 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CO704_RS24660 8fbbac121f2653c5dd58b52c308cd248 188 Gene3D G3DSA:3.40.50.360 1 188 6.1E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS24660 8fbbac121f2653c5dd58b52c308cd248 188 SUPERFAMILY SSF52218 6 178 7.76E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 SUPERFAMILY SSF52317 3 195 9.32E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.098 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 PIRSF PIRSF000495 1 196 7.2E-63 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 Gene3D G3DSA:3.40.50.880 1 196 9.4E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 2.5E-71 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 Pfam PF00117 Glutamine amidotransferase class-I 38 194 1.4E-16 T 28-03-2018 IPR017926 Glutamine amidotransferase CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 28-03-2018 CO704_RS07680 a6ffc78f28a1a4db243ed64181bedbd7 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 28-03-2018 CO704_RS24655 f4001daf3a9e1530d967daba8f074266 443 PIRSF PIRSF005353 5 443 6.8E-176 T 28-03-2018 IPR026033 Purine permease PbuG-like CO704_RS24655 f4001daf3a9e1530d967daba8f074266 443 Pfam PF00860 Permease family 31 404 2.3E-43 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS00740 3520cc6e9ac36ba6c957d6484cd35165 74 SMART SM00899 1 72 3.0E-6 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CO704_RS00740 3520cc6e9ac36ba6c957d6484cd35165 74 Pfam PF04023 FeoA domain 11 71 1.0E-7 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CO704_RS00740 3520cc6e9ac36ba6c957d6484cd35165 74 SUPERFAMILY SSF50037 5 72 9.39E-16 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CO704_RS00740 3520cc6e9ac36ba6c957d6484cd35165 74 Gene3D G3DSA:2.30.30.90 1 74 2.0E-12 T 28-03-2018 CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 PIRSF PIRSF006188 1 72 3.8E-35 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.6E-23 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 SUPERFAMILY SSF158651 1 75 2.88E-31 T 28-03-2018 IPR023202 YejL-like domain CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 Gene3D G3DSA:1.10.3390.10 2 71 3.1E-34 T 28-03-2018 IPR023202 YejL-like domain CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 5.0E-26 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CO704_RS06785 bb5875e5014c6208be9b08088748341d 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.28 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CO704_RS17020 d9b66c841f79bbbe40d2769de5b37a43 54 Pfam PF07125 Protein of unknown function (DUF1378) 1 50 2.2E-26 T 28-03-2018 IPR009808 Protein of unknown function, DUF1378 CO704_RS12450 d9b66c841f79bbbe40d2769de5b37a43 54 Pfam PF07125 Protein of unknown function (DUF1378) 1 50 2.2E-26 T 28-03-2018 IPR009808 Protein of unknown function, DUF1378 CO704_RS22280 cd28e93be8f81fdc7503382784d6eb4c 442 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 425 3.1E-111 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS22280 cd28e93be8f81fdc7503382784d6eb4c 442 PIRSF PIRSF006351 1 436 8.2E-135 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS22280 cd28e93be8f81fdc7503382784d6eb4c 442 Pfam PF02378 Phosphotransferase system, EIIC 28 352 1.4E-53 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 Pfam PF11412 Disulphide bond corrector protein DsbC 46 146 2.3E-16 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 SUPERFAMILY SSF52833 504 620 1.12E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 285 488 1.5E-8 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 Pfam PF13899 Thioredoxin-like 513 599 3.0E-15 T 28-03-2018 CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 Gene3D G3DSA:3.40.30.10 502 610 4.4E-9 T 28-03-2018 CO704_RS07945 dfd7858fd043a0f22113219ad506d4ce 628 Gene3D G3DSA:2.60.40.1250 22 157 1.6E-6 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 Gene3D G3DSA:2.30.330.10 263 343 4.4E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 Gene3D G3DSA:2.30.330.10 154 205 0.23 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 PRINTS PR00956 Flagellar motor switch protein FliN signature 270 286 5.2E-5 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 PRINTS PR00956 Flagellar motor switch protein FliN signature 287 303 5.2E-5 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 PRINTS PR00956 Flagellar motor switch protein FliN signature 316 331 5.2E-5 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 SUPERFAMILY SSF101801 269 343 1.14E-13 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS16110 ddb460e7800c041d82dcd32663fd80f6 350 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 272 340 2.6E-9 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CO704_RS13535 94dd9519b2ed74bb9b6e26b7f53e94c5 282 SUPERFAMILY SSF54001 146 276 4.9E-41 T 28-03-2018 CO704_RS13535 94dd9519b2ed74bb9b6e26b7f53e94c5 282 Gene3D G3DSA:2.30.260.10 201 280 2.2E-18 T 28-03-2018 CO704_RS13535 94dd9519b2ed74bb9b6e26b7f53e94c5 282 Pfam PF00877 NlpC/P60 family 164 274 8.8E-32 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CO704_RS13535 94dd9519b2ed74bb9b6e26b7f53e94c5 282 Gene3D G3DSA:3.90.1720.10 76 200 1.0E-17 T 28-03-2018 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.914 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.7E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Gene3D G3DSA:2.40.30.20 3 82 6.6E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 SUPERFAMILY SSF47917 383 511 3.4E-45 T 28-03-2018 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 SUPERFAMILY SSF52540 96 381 2.46E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 3.5E-13 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Gene3D G3DSA:1.20.150.20 384 510 2.3E-45 T 28-03-2018 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.7E-44 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 Gene3D G3DSA:3.40.50.300 83 375 3.4E-112 T 28-03-2018 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 3.0E-260 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CO704_RS24125 55b610624a9c579c9ad32bed6fcf4fdf 513 SUPERFAMILY SSF50615 10 94 1.02E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS01845 a1ca80f8becdca2248eb461795826037 335 SUPERFAMILY SSF51679 8 327 2.0E-86 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS01845 a1ca80f8becdca2248eb461795826037 335 Gene3D G3DSA:3.20.20.30 6 329 1.8E-72 T 28-03-2018 CO704_RS01845 a1ca80f8becdca2248eb461795826037 335 Pfam PF00296 Luciferase-like monooxygenase 12 304 1.4E-34 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS01845 a1ca80f8becdca2248eb461795826037 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 1.9E-134 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 526 646 3.7E-46 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 Pfam PF02378 Phosphotransferase system, EIIC 12 324 4.2E-79 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 Pfam PF00367 phosphotransferase system, EIIB 421 454 2.5E-11 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 SUPERFAMILY SSF55604 419 490 3.92E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 Gene3D G3DSA:3.30.1360.60 417 492 3.4E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 526 649 2.7E-45 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 432 449 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 SUPERFAMILY SSF51261 521 669 5.76E-49 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 490 1.1E-201 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 479 1.5E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 588 600 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CO704_RS17090 33912a5d23aeb3158a602cd6057fc7c5 674 Gene3D G3DSA:2.70.70.10 514 673 3.1E-52 T 28-03-2018 CO704_RS24800 9b8092fc90ed7cc55043cdd11af3bb54 322 SUPERFAMILY SSF51445 34 312 8.79E-25 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS24800 9b8092fc90ed7cc55043cdd11af3bb54 322 Gene3D G3DSA:3.20.20.80 46 297 8.8E-17 T 28-03-2018 CO704_RS24800 9b8092fc90ed7cc55043cdd11af3bb54 322 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 57 263 2.8E-8 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CO704_RS12085 fd24b0b84a0b0b0ef11827c8a7c4153d 179 Gene3D G3DSA:3.40.430.10 1 172 5.1E-31 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS12085 fd24b0b84a0b0b0ef11827c8a7c4153d 179 Pfam PF01872 RibD C-terminal domain 4 161 5.1E-8 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CO704_RS12085 fd24b0b84a0b0b0ef11827c8a7c4153d 179 SUPERFAMILY SSF53597 4 173 3.4E-29 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 SUPERFAMILY SSF50891 1 162 5.99E-60 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 PIRSF PIRSF001467 1 164 2.8E-28 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 3.0E-48 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 Gene3D G3DSA:2.40.100.10 1 164 1.5E-52 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.9E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.9E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS05600 8a90187bf6286eb0cf2be6dd5bd96b4f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.9E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.4E-23 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 SUPERFAMILY SSF56281 1 251 1.57E-68 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.743 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 8.1E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 1.7E-102 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 Gene3D G3DSA:3.60.15.10 1 251 7.2E-71 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 PIRSF PIRSF005457 1 251 3.1E-90 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CO704_RS19085 1222b9c367ef581c77a0097fa24a6007 251 SMART SM00849 11 165 3.6E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS01420 40a6db973899b63543be11866a38dc57 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 5.1E-139 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CO704_RS01420 40a6db973899b63543be11866a38dc57 324 SMART SM00829 11 321 1.4E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS01420 40a6db973899b63543be11866a38dc57 324 Gene3D G3DSA:3.40.50.720 161 269 2.7E-14 T 28-03-2018 CO704_RS01420 40a6db973899b63543be11866a38dc57 324 Pfam PF00107 Zinc-binding dehydrogenase 158 269 1.6E-16 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS01420 40a6db973899b63543be11866a38dc57 324 SUPERFAMILY SSF51735 115 287 3.93E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01420 40a6db973899b63543be11866a38dc57 324 Gene3D G3DSA:3.90.180.10 1 160 1.0E-30 T 28-03-2018 CO704_RS01420 40a6db973899b63543be11866a38dc57 324 SUPERFAMILY SSF50129 1 145 6.45E-44 T 28-03-2018 IPR011032 GroES-like CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 31.289 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 SUPERFAMILY SSF53613 8 261 1.8E-61 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PIRSF PIRSF000513 9 262 4.7E-96 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 260 2.1E-90 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 2.6E-93 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 8.5E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07300 f89257a134d3f6cd64386b2aace14f6b 262 Gene3D G3DSA:3.40.1190.20 6 262 3.9E-53 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 Gene3D G3DSA:3.40.50.1100 20 133 9.7E-33 T 28-03-2018 CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 7.9E-146 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 Gene3D G3DSA:3.40.50.1100 134 315 5.4E-59 T 28-03-2018 CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 2.2E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 3.0E-137 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CO704_RS05840 fb7b9478cb18600e263bccb4e5be75f2 323 SUPERFAMILY SSF53686 3 317 5.24E-98 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS25450 729bc094960adc6cc0f7188dbd55dfaa 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 141 183 1.2E-13 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CO704_RS25450 729bc094960adc6cc0f7188dbd55dfaa 536 Pfam PF13007 Transposase C of IS166 homeodomain 62 132 2.3E-13 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain CO704_RS25450 729bc094960adc6cc0f7188dbd55dfaa 536 Pfam PF03050 Transposase IS66 family 198 482 5.9E-87 T 28-03-2018 IPR004291 Transposase, IS66 CO704_RS25450 729bc094960adc6cc0f7188dbd55dfaa 536 Pfam PF13817 IS66 C-terminal element 489 525 2.6E-16 T 28-03-2018 CO704_RS07470 0a998751b58637d50e4fc9c9e4a5ed22 250 Gene3D G3DSA:3.90.550.10 1 212 4.0E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07470 0a998751b58637d50e4fc9c9e4a5ed22 250 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 249 5.4E-148 T 28-03-2018 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE CO704_RS07470 0a998751b58637d50e4fc9c9e4a5ed22 250 SUPERFAMILY SSF53448 1 206 6.94E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS07470 0a998751b58637d50e4fc9c9e4a5ed22 250 Pfam PF00535 Glycosyl transferase family 2 4 137 5.8E-14 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 Pfam PF00990 Diguanylate cyclase, GGDEF domain 381 536 2.3E-41 T 28-03-2018 IPR000160 GGDEF domain CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 Pfam PF17151 Periplasmic sensor domain 36 211 4.1E-7 T 28-03-2018 IPR033416 Periplasmic sensor domain CHASE7 CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 538 5.7E-50 T 28-03-2018 IPR000160 GGDEF domain CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 SUPERFAMILY SSF55073 386 539 2.82E-43 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 Gene3D G3DSA:3.30.70.270 364 540 1.6E-49 T 28-03-2018 CO704_RS05940 20373f98d980bb14cbf01fbcbed4beff 547 SMART SM00267 370 540 3.8E-54 T 28-03-2018 IPR000160 GGDEF domain CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 SUPERFAMILY SSF88659 164 228 6.73E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 SUPERFAMILY SSF88946 16 89 1.01E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Gene3D G3DSA:1.10.1740.10 7 96 1.1E-14 T 28-03-2018 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Pfam PF04542 Sigma-70 region 2 19 90 1.1E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 227 6.0E-65 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Gene3D G3DSA:1.10.10.10 97 137 6.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Gene3D G3DSA:1.10.10.10 159 229 9.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 PRINTS PR00046 Major sigma-70 factor signature 199 214 2.6E-6 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 PRINTS PR00046 Major sigma-70 factor signature 182 194 2.6E-6 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 PRINTS PR00046 Major sigma-70 factor signature 45 58 2.6E-6 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 PRINTS PR00046 Major sigma-70 factor signature 214 225 2.6E-6 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Pfam PF04539 Sigma-70 region 3 97 138 4.6E-7 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 SUPERFAMILY SSF88659 91 157 2.66E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 Pfam PF04545 Sigma-70, region 4 178 225 2.8E-13 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17370 396c92cb4adc8ca3fc83a68979ce4fb8 229 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 227 3.5E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS10820 7662e97f387a69f028e7704642ecb19a 401 Pfam PF07690 Major Facilitator Superfamily 31 328 7.5E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS10820 7662e97f387a69f028e7704642ecb19a 401 Gene3D G3DSA:1.20.1250.20 13 202 1.2E-17 T 28-03-2018 CO704_RS10820 7662e97f387a69f028e7704642ecb19a 401 SUPERFAMILY SSF103473 21 397 7.06E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10820 7662e97f387a69f028e7704642ecb19a 401 Gene3D G3DSA:1.20.1250.20 207 401 8.6E-16 T 28-03-2018 CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 SUPERFAMILY SSF47384 256 323 3.53E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 Pfam PF11884 Domain of unknown function (DUF3404) 32 266 2.8E-33 T 28-03-2018 IPR021821 Protein of unknown function DUF3404 CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 Pfam PF14501 GHKL domain 381 466 1.8E-6 T 28-03-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 Gene3D G3DSA:3.30.565.10 260 470 5.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 SUPERFAMILY SSF55874 354 469 1.57E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS12595 fe5285c59992e5ec7074632013709dd0 472 SMART SM00387 373 471 7.6E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 Gene3D G3DSA:3.40.50.2300 370 473 5.7E-20 T 28-03-2018 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 636 6.3E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 Pfam PF02378 Phosphotransferase system, EIIC 17 277 6.4E-20 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 SUPERFAMILY SSF52794 379 468 1.83E-23 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 541 557 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 7.4E-188 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 462 2.7E-10 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 Gene3D G3DSA:3.40.930.10 497 639 6.4E-37 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS00220 e269132a2f8f6f147c6e3af6fad934f6 639 SUPERFAMILY SSF55804 498 636 1.7E-40 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS00670 42132a6bc787232601053c1bec486773 815 PIRSF PIRSF000460 2 815 2.2E-236 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00670 42132a6bc787232601053c1bec486773 815 SUPERFAMILY SSF53756 9 814 0.0 T 28-03-2018 CO704_RS00670 42132a6bc787232601053c1bec486773 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00670 42132a6bc787232601053c1bec486773 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00670 42132a6bc787232601053c1bec486773 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CO704_RS00670 42132a6bc787232601053c1bec486773 815 Gene3D G3DSA:3.40.50.2000 480 795 7.2E-144 T 28-03-2018 CO704_RS00670 42132a6bc787232601053c1bec486773 815 Gene3D G3DSA:3.40.50.2000 6 479 7.4E-199 T 28-03-2018 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 Gene3D G3DSA:3.40.50.2300 24 195 1.1E-25 T 28-03-2018 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 Gene3D G3DSA:3.40.50.2300 196 378 1.8E-22 T 28-03-2018 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 4.0E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 4.0E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 4.0E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 1.2E-180 T 28-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 Pfam PF13433 Periplasmic binding protein domain 31 407 1.7E-175 T 28-03-2018 CO704_RS10710 b8d88e67cdd9a8fbd77b4b74ce33fa71 423 SUPERFAMILY SSF53822 30 408 2.88E-94 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS14310 82bb1a33dd19c20cc34ad370695b61dd 325 Gene3D G3DSA:3.40.190.10 15 137 3.1E-14 T 28-03-2018 CO704_RS14310 82bb1a33dd19c20cc34ad370695b61dd 325 Pfam PF13343 Bacterial extracellular solute-binding protein 76 306 6.7E-31 T 28-03-2018 CO704_RS14310 82bb1a33dd19c20cc34ad370695b61dd 325 PIRSF PIRSF002825 1 321 8.1E-60 T 28-03-2018 IPR026045 Ferric binding protein CO704_RS14310 82bb1a33dd19c20cc34ad370695b61dd 325 Gene3D G3DSA:3.40.190.10 138 323 5.7E-32 T 28-03-2018 CO704_RS14310 82bb1a33dd19c20cc34ad370695b61dd 325 SUPERFAMILY SSF53850 22 311 3.82E-67 T 28-03-2018 CO704_RS04875 34d37dde72939ca3cd49a52e79085a0a 384 PIRSF PIRSF004925 1 384 3.4E-110 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter CO704_RS04875 34d37dde72939ca3cd49a52e79085a0a 384 SUPERFAMILY SSF103473 7 371 4.45E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS04875 34d37dde72939ca3cd49a52e79085a0a 384 Gene3D G3DSA:1.20.1250.20 194 374 6.0E-10 T 28-03-2018 CO704_RS04875 34d37dde72939ca3cd49a52e79085a0a 384 Pfam PF12832 MFS_1 like family 8 355 5.7E-44 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain CO704_RS04875 34d37dde72939ca3cd49a52e79085a0a 384 Gene3D G3DSA:1.20.1250.20 4 191 7.3E-12 T 28-03-2018 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 42.765 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 2.1E-177 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 5.0E-148 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 Gene3D G3DSA:3.40.50.2000 1 184 4.0E-5 T 28-03-2018 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 SUPERFAMILY SSF53756 9 360 4.71E-27 T 28-03-2018 CO704_RS19245 3e4b2e4759898d99132231a61652a30b 382 Gene3D G3DSA:3.40.50.2000 185 366 2.2E-13 T 28-03-2018 CO704_RS05465 499a1f42a09244b5cae305c0f9ef691c 266 Pfam PF01963 TraB family 30 265 4.8E-34 T 28-03-2018 IPR002816 Pheromone shutdown, TraB CO704_RS14950 d3811e9109a07747f4ce6714cad2d496 107 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 6.3E-34 T 28-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CO704_RS14950 d3811e9109a07747f4ce6714cad2d496 107 Gene3D G3DSA:3.40.50.2300 5 107 7.5E-31 T 28-03-2018 CO704_RS14950 d3811e9109a07747f4ce6714cad2d496 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.8E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS14950 d3811e9109a07747f4ce6714cad2d496 107 SUPERFAMILY SSF52794 4 102 3.66E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 SUPERFAMILY SSF46689 58 107 7.17E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 Gene3D G3DSA:1.10.10.60 60 111 4.9E-12 T 28-03-2018 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 SUPERFAMILY SSF46689 6 56 1.75E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 SMART SM00342 22 105 3.0E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 Pfam PF12833 Helix-turn-helix domain 28 106 2.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 56 101 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 Gene3D G3DSA:1.10.10.60 2 59 5.4E-11 T 28-03-2018 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS15160 a2bbabdf9b1198f3f531d080d33efd93 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS23985 9d3ba7cb068cc7d376ec5cb6b55f6526 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-39 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 CO704_RS23985 9d3ba7cb068cc7d376ec5cb6b55f6526 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 6.8E-46 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 SMART SM00079 42 262 4.1E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 Gene3D G3DSA:3.40.190.10 157 265 3.6E-16 T 28-03-2018 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 SMART SM00062 42 263 9.5E-86 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 SUPERFAMILY SSF53850 14 264 1.24E-76 T 28-03-2018 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 Gene3D G3DSA:3.40.190.10 3 156 4.1E-46 T 28-03-2018 CO704_RS08530 cb710481b40e96e630a917e6b78b9811 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.4E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS07870 0a31fad735c224d1b207fb7c00faba7f 254 Pfam PF07722 Peptidase C26 8 224 1.8E-65 T 28-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CO704_RS07870 0a31fad735c224d1b207fb7c00faba7f 254 Gene3D G3DSA:3.40.50.880 4 254 5.0E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS07870 0a31fad735c224d1b207fb7c00faba7f 254 SUPERFAMILY SSF52317 26 243 3.82E-37 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 1.7E-51 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 Gene3D G3DSA:3.40.35.10 161 317 7.4E-60 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 Pfam PF03610 PTS system fructose IIA component 5 118 4.5E-35 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 Gene3D G3DSA:3.40.50.510 2 136 1.1E-37 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 161 309 3.2E-55 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 Pfam PF03830 PTS system sorbose subfamily IIB component 162 309 4.1E-55 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 SUPERFAMILY SSF52728 160 318 1.31E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS09135 89035fe2e0c87fc339c929fcbeb3ae48 320 SUPERFAMILY SSF53062 3 128 8.89E-38 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS12980 02266f604f1092510b317964908ef60a 844 Pfam PF13953 PapC C-terminal domain 762 828 7.8E-25 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CO704_RS12980 02266f604f1092510b317964908ef60a 844 Pfam PF00577 Outer membrane usher protein 192 752 7.1E-195 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CO704_RS12980 02266f604f1092510b317964908ef60a 844 Pfam PF13954 PapC N-terminal domain 33 176 4.8E-44 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CO704_RS12980 02266f604f1092510b317964908ef60a 844 SUPERFAMILY SSF141729 57 167 5.1E-32 T 28-03-2018 CO704_RS12980 02266f604f1092510b317964908ef60a 844 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 305 315 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CO704_RS21660 d33969bfcc65d5cba226fde5b67c9255 76 Pfam PF06006 Bacterial protein of unknown function (DUF905) 7 74 4.8E-43 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CO704_RS21660 d33969bfcc65d5cba226fde5b67c9255 76 Gene3D G3DSA:3.30.160.130 6 74 1.6E-39 T 28-03-2018 CO704_RS21660 d33969bfcc65d5cba226fde5b67c9255 76 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 5 76 2.0E-37 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CO704_RS21660 d33969bfcc65d5cba226fde5b67c9255 76 SUPERFAMILY SSF54786 12 74 9.42E-30 T 28-03-2018 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 208 229 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 118 139 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 250 273 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 414 435 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 331 352 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 547 566 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 PRINTS PR01440 Cellulose synthase subunit B signature 584 604 1.9E-34 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24580 dda03c179060a5185a19a0231487127c 797 Pfam PF03170 Bacterial cellulose synthase subunit 90 698 2.5E-220 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 77.588 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 Pfam PF00171 Aldehyde dehydrogenase family 17 470 2.2E-160 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 Gene3D G3DSA:3.40.309.10 260 456 4.5E-65 T 28-03-2018 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 3.2E-296 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 SUPERFAMILY SSF53720 3 473 6.15E-154 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS11575 c1638ade990eeaeb5e3ca34e5ee5a0db 474 Gene3D G3DSA:3.40.605.10 1 259 6.0E-92 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS08735 ca7f09f9cb9cd8a72b98ce5bff016197 759 Pfam PF00577 Outer membrane usher protein 157 664 1.1E-31 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CO704_RS10545 e927a8669dd9bcd488828eb129e10181 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 19 67 2.4E-6 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CO704_RS10545 e927a8669dd9bcd488828eb129e10181 75 Gene3D G3DSA:3.40.1620.10 1 54 0.0014 T 28-03-2018 CO704_RS10545 e927a8669dd9bcd488828eb129e10181 75 SUPERFAMILY SSF143120 1 70 7.32E-10 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CO704_RS13655 7510d4e7b1864581d1b409c04f85dd3f 493 Pfam PF01458 Uncharacterized protein family (UPF0051) 232 464 5.8E-68 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CO704_RS13655 7510d4e7b1864581d1b409c04f85dd3f 493 SUPERFAMILY SSF101960 40 85 1.02E-135 T 28-03-2018 CO704_RS13655 7510d4e7b1864581d1b409c04f85dd3f 493 SUPERFAMILY SSF101960 123 490 1.02E-135 T 28-03-2018 CO704_RS13655 7510d4e7b1864581d1b409c04f85dd3f 493 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 484 2.5E-193 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CO704_RS10170 b99d10983d2e5f792a6aa249c020c8c2 54 Pfam PF07125 Protein of unknown function (DUF1378) 1 49 3.0E-26 T 28-03-2018 IPR009808 Protein of unknown function, DUF1378 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 Pfam PF00255 Glutathione peroxidase 7 111 2.3E-43 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 Gene3D G3DSA:3.40.30.10 4 183 6.3E-47 T 28-03-2018 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 PIRSF PIRSF000303 1 183 1.0E-64 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 SUPERFAMILY SSF52833 5 182 8.03E-57 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 51.824 T 28-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS13785 3c096453db2aa3dbb5d37274b178052f 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 ProSitePatterns PS01218 TatC family signature. 154 173 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 241 18.185 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 3.6E-77 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.4E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.4E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.4E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.4E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS23100 e1b47f1d8f8119801f44bfc3c3be1af7 260 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.2E-64 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 Pfam PF04962 KduI/IolB family 9 264 5.4E-111 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 18 264 4.2E-96 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 Gene3D G3DSA:2.60.120.10 123 269 7.6E-57 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 PIRSF PIRSF036628 1 270 2.4E-110 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 Gene3D G3DSA:2.60.120.10 17 122 4.3E-32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS02650 ed3a128c74c669dbbb63c5a609a0462f 274 SUPERFAMILY SSF51182 4 253 2.27E-68 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS18735 b5eb9acbdc6b8093134f679ae871708f 167 Gene3D G3DSA:2.60.40.1090 36 167 1.5E-25 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18735 b5eb9acbdc6b8093134f679ae871708f 167 SUPERFAMILY SSF49401 27 166 1.74E-23 T 28-03-2018 IPR008966 Adhesion domain CO704_RS20680 0c206e4faf5e39b39b0b0e31a58777d2 125 Hamap MF_00904 Modulator protein MzrA [mzrA]. 1 114 27.752 T 28-03-2018 IPR026574 Modulator protein MzrA CO704_RS20680 0c206e4faf5e39b39b0b0e31a58777d2 125 Pfam PF13721 SecD export protein N-terminal TM region 12 102 4.5E-16 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain CO704_RS20075 73f35621954ba5c0a5c95c7229135405 211 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.6E-65 T 28-03-2018 IPR019305 Uncharacterised protein family Smp CO704_RS20075 73f35621954ba5c0a5c95c7229135405 211 Gene3D G3DSA:3.30.450.20 33 159 6.2E-4 T 28-03-2018 CO704_RS10240 db276d28deec49ab68fca8a95a7127ba 209 SUPERFAMILY SSF56925 21 209 4.45E-27 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS10240 db276d28deec49ab68fca8a95a7127ba 209 Gene3D G3DSA:2.40.160.20 20 209 6.1E-35 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS10240 db276d28deec49ab68fca8a95a7127ba 209 Pfam PF03922 OmpW family 21 209 5.2E-67 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CO704_RS05440 9845ce40b1ee9a5277c0ceb058bed156 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 8.2E-8 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS05440 9845ce40b1ee9a5277c0ceb058bed156 434 Gene3D G3DSA:3.40.1190.20 32 431 5.2E-41 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05440 9845ce40b1ee9a5277c0ceb058bed156 434 SUPERFAMILY SSF53613 36 305 7.48E-44 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05440 9845ce40b1ee9a5277c0ceb058bed156 434 SUPERFAMILY SSF53613 338 416 7.48E-44 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05440 9845ce40b1ee9a5277c0ceb058bed156 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS22345 ce24e1b9e51e41a92321da5f31820430 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 349 1.1E-153 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CO704_RS22345 ce24e1b9e51e41a92321da5f31820430 354 PIRSF PIRSF007313 1 354 9.3E-160 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 Pfam PF00772 DnaB-like helicase N terminal domain 9 109 1.8E-31 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 Pfam PF03796 DnaB-like helicase C terminal domain 184 441 4.0E-95 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 SUPERFAMILY SSF52540 182 434 1.14E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 SMART SM00382 201 401 2.3E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 1.3E-143 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 SUPERFAMILY SSF48024 9 117 6.15E-36 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 Gene3D G3DSA:1.10.860.10 2 149 4.1E-43 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CO704_RS22180 1d143716bb9a47f40527f052089e4b1e 456 Gene3D G3DSA:3.40.50.300 168 448 7.5E-59 T 28-03-2018 CO704_RS20570 5ca87efce66e5c3de7c47e4b0059d99e 277 Gene3D G3DSA:3.40.50.300 1 274 6.0E-59 T 28-03-2018 CO704_RS20570 5ca87efce66e5c3de7c47e4b0059d99e 277 SUPERFAMILY SSF52540 4 239 2.4E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20570 5ca87efce66e5c3de7c47e4b0059d99e 277 SMART SM00382 28 226 2.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20570 5ca87efce66e5c3de7c47e4b0059d99e 277 Pfam PF00005 ABC transporter 23 176 1.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.1E-21 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 SUPERFAMILY SSF57840 1 38 6.93E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.868 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 Pfam PF00444 Ribosomal protein L36 1 38 1.2E-19 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01200 8960b94b50868cbf3378753c0d770351 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 9.0E-10 T 28-03-2018 CO704_RS23165 171ebd7f3144f9ad9f81ae6124ed8f52 330 SUPERFAMILY SSF53474 15 329 3.24E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS23165 171ebd7f3144f9ad9f81ae6124ed8f52 330 Pfam PF12146 Serine aminopeptidase, S33 52 312 1.1E-57 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CO704_RS23165 171ebd7f3144f9ad9f81ae6124ed8f52 330 Gene3D G3DSA:3.40.50.1820 29 330 5.4E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Pfam PF02911 Formyl transferase, C-terminal domain 202 295 1.3E-17 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Gene3D G3DSA:3.40.50.720 314 658 2.1E-45 T 28-03-2018 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.4E-42 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 SUPERFAMILY SSF50486 205 304 1.43E-22 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.911 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 PIRSF PIRSF036506 1 660 0.0 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 SUPERFAMILY SSF51735 317 652 4.51E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Gene3D G3DSA:3.10.25.10 203 305 2.7E-21 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Pfam PF00551 Formyl transferase 53 174 1.0E-25 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 SUPERFAMILY SSF53328 1 202 8.37E-55 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS13035 00cf9e5aff3a94e5c74ec8a3240e5820 660 Gene3D G3DSA:3.40.50.170 1 200 8.8E-48 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CO704_RS02770 6403d48cbc9d08cbe0d49376fdb70166 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 9.8E-70 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CO704_RS02770 6403d48cbc9d08cbe0d49376fdb70166 197 Gene3D G3DSA:3.90.950.10 1 197 3.5E-83 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS02770 6403d48cbc9d08cbe0d49376fdb70166 197 SUPERFAMILY SSF52972 1 195 3.4E-76 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CO704_RS02770 6403d48cbc9d08cbe0d49376fdb70166 197 Pfam PF01725 Ham1 family 4 192 1.3E-59 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CO704_RS02770 6403d48cbc9d08cbe0d49376fdb70166 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 52.084 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 7.6E-173 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Gene3D G3DSA:3.40.50.920 541 663 2.6E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 SUPERFAMILY SSF52922 532 663 7.72E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.8E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 SUPERFAMILY SSF52518 5 331 1.53E-121 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Gene3D G3DSA:3.40.50.970 364 540 1.6E-41 T 28-03-2018 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.4E-19 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 Gene3D G3DSA:3.40.50.970 1 363 6.7E-128 T 28-03-2018 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 SMART SM00861 355 525 1.1E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 SUPERFAMILY SSF52518 336 526 1.13E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CO704_RS02900 4afd147eddb963c018d445a901d8fa73 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CO704_RS11795 6736e957eb665c85444f35acacbbbe46 255 Gene3D G3DSA:3.90.226.10 3 212 1.3E-68 T 28-03-2018 CO704_RS11795 6736e957eb665c85444f35acacbbbe46 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 254 9.2E-74 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS11795 6736e957eb665c85444f35acacbbbe46 255 Gene3D G3DSA:1.10.12.10 213 255 6.4E-21 T 28-03-2018 IPR014748 Crontonase, C-terminal CO704_RS11795 6736e957eb665c85444f35acacbbbe46 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CO704_RS11795 6736e957eb665c85444f35acacbbbe46 255 SUPERFAMILY SSF52096 3 255 4.42E-83 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 375 1.2E-52 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 391 2.6E-195 T 28-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 SUPERFAMILY SSF53686 35 354 1.96E-61 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 Gene3D G3DSA:3.40.50.1100 53 190 1.2E-29 T 28-03-2018 CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 393 2.2E-191 T 28-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CO704_RS11015 a8dcce40075000db4080538de1940d5a 399 Gene3D G3DSA:3.40.50.1100 194 390 3.5E-26 T 28-03-2018 CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 327 401 5.3E-17 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 Pfam PF00460 Flagella basal body rod protein 3 33 8.8E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 Pfam PF07559 Flagellar basal body protein FlaE 170 285 3.1E-22 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 Gene3D G3DSA:2.60.98.20 144 286 4.0E-34 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 SUPERFAMILY SSF117143 73 365 7.45E-82 T 28-03-2018 CO704_RS17470 d9b788d466c6e6ffc6c67db044c317b2 404 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 386 5.2E-96 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CO704_RS06475 ac668b74709ef6e4fe50c3d068118025 90 SUPERFAMILY SSF52794 1 85 8.89E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS06475 ac668b74709ef6e4fe50c3d068118025 90 Gene3D G3DSA:3.40.50.2300 1 88 3.6E-19 T 28-03-2018 CO704_RS06475 ac668b74709ef6e4fe50c3d068118025 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 1.6E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS20455 7976e04c6342eca05dc7df5b93a77074 193 Gene3D G3DSA:1.20.950.20 3 192 4.5E-29 T 28-03-2018 CO704_RS20455 7976e04c6342eca05dc7df5b93a77074 193 Pfam PF01292 Prokaryotic cytochrome b561 11 186 9.0E-26 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS20455 7976e04c6342eca05dc7df5b93a77074 193 SUPERFAMILY SSF81342 9 186 4.87E-27 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:3.30.1300.30 1631 1726 9.5E-26 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 955 1094 3.8E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 547 624 2.3E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 1117 1228 3.2E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 449 526 2.6E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 237 336 2.1E-24 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 SUPERFAMILY SSF54523 1619 1726 1.13E-24 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 1095 1116 9.7E-9 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 1367 1424 7.4E-9 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 337 362 1.7E-11 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 1229 1252 1.1E-9 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 790 811 3.1E-10 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 SUPERFAMILY SSF101967 185 346 1.11E-26 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF03895 YadA-like membrane anchor domain 1666 1726 4.5E-17 T 28-03-2018 IPR005594 YadA-like, C-terminal CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 527 546 1.3E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 938 954 9.9E-6 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 432 448 1.3E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:1.20.5.170 625 646 1.3E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 812 937 6.5E-6 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 1489 1630 1.3E-36 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 363 431 9.1E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 116 236 8.4E-15 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 1253 1366 0.0039 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Gene3D G3DSA:2.150.10.10 647 789 6.0E-6 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1214 1254 4.5E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 319 362 8.4E-12 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 509 552 9.6E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1463 1501 1.1E-4 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1608 1641 1.0E-10 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 411 454 9.6E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1352 1390 0.0016 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 770 811 2.2E-6 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 918 960 2.4E-6 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1080 1120 1.2E-6 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 607 650 9.6E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1550 1576 1.2E-7 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05658 Head domain of trimeric autotransporter adhesin 245 269 1.7E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1578 1602 3.1E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF05658 Head domain of trimeric autotransporter adhesin 177 201 6.3E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 SUPERFAMILY SSF101967 1436 1484 4.97E-5 T 28-03-2018 CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.8E-7 T 28-03-2018 IPR024973 ESPR domain CO704_RS12765 b9c1932150973d316b4eaed833f347bf 1726 SUPERFAMILY SSF101967 1506 1631 1.57E-30 T 28-03-2018 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 5.8E-38 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 SMART SM01005 234 358 5.2E-58 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 Hamap MF_01201 Alanine racemase. 1 358 35.113 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 SUPERFAMILY SSF51419 8 235 2.18E-70 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 26 42 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 288 305 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 250 265 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 155 166 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 60 78 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 192 219 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 267 282 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 340 353 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 PRINTS PR00992 Alanine racemase signature 120 132 3.0E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 Gene3D G3DSA:3.20.20.10 1 216 2.1E-47 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 4.0E-140 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 Gene3D G3DSA:2.40.37.10 217 359 5.9E-51 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 SUPERFAMILY SSF50621 226 358 1.99E-43 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS22610 e3d0edf9c7bfd0557890e9b19dc436c9 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 9.7E-72 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS08265 25f54e9e1025d1eb5b8acbe6a6941cdc 550 Gene3D G3DSA:1.20.58.220 442 536 5.2E-11 T 28-03-2018 CO704_RS08265 25f54e9e1025d1eb5b8acbe6a6941cdc 550 Gene3D G3DSA:1.20.58.220 329 441 8.9E-9 T 28-03-2018 CO704_RS08265 25f54e9e1025d1eb5b8acbe6a6941cdc 550 SUPERFAMILY SSF109755 333 534 3.66E-23 T 28-03-2018 CO704_RS08265 25f54e9e1025d1eb5b8acbe6a6941cdc 550 Pfam PF02690 Na+/Pi-cotransporter 164 261 2.4E-8 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CO704_RS08265 25f54e9e1025d1eb5b8acbe6a6941cdc 550 Pfam PF02690 Na+/Pi-cotransporter 16 151 7.2E-34 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 Gene3D G3DSA:3.40.50.300 1 252 3.0E-74 T 28-03-2018 CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 SUPERFAMILY SSF52540 5 248 7.76E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 PIRSF PIRSF039085 1 253 2.6E-109 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 Pfam PF00005 ABC transporter 20 178 1.5E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS02685 5eb2686cebdc0e530f18c84bb945e650 253 SMART SM00382 29 226 3.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS23590 199579536c6186f76519602ed3953763 346 Gene3D G3DSA:3.30.70.1070 268 343 3.9E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS23590 199579536c6186f76519602ed3953763 346 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 171 6.0E-47 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CO704_RS23590 199579536c6186f76519602ed3953763 346 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 163 342 7.0E-38 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CO704_RS23590 199579536c6186f76519602ed3953763 346 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 346 34.66 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CO704_RS23590 199579536c6186f76519602ed3953763 346 SUPERFAMILY SSF110997 271 341 1.44E-19 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS23590 199579536c6186f76519602ed3953763 346 Pfam PF05036 Sporulation related domain 272 340 7.2E-17 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.4E-105 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 SUPERFAMILY SSF51366 1 266 4.05E-90 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 4.4E-96 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.833 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CO704_RS10245 6025ba2bc87b55b6b064daa924718473 268 Gene3D G3DSA:3.20.20.70 2 268 4.5E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 6.6E-34 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.513 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 PIRSF PIRSF029256 1 154 1.4E-70 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 8.1E-74 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 Gene3D G3DSA:3.40.1280.10 1 156 1.2E-36 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS23690 4016340e3a2c7f278ae14ded80bcb57f 157 SUPERFAMILY SSF75217 1 152 5.95E-46 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS10695 c3f6df85107b2fe02991d2348a9f0cf4 598 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 36 593 6.9E-250 T 28-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CO704_RS10695 c3f6df85107b2fe02991d2348a9f0cf4 598 Pfam PF01425 Amidase 28 436 4.7E-90 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS10695 c3f6df85107b2fe02991d2348a9f0cf4 598 SUPERFAMILY SSF75304 7 446 1.05E-110 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS10695 c3f6df85107b2fe02991d2348a9f0cf4 598 Gene3D G3DSA:3.90.1300.10 1 463 2.5E-112 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS10695 c3f6df85107b2fe02991d2348a9f0cf4 598 Gene3D G3DSA:3.10.490.10 467 597 3.7E-27 T 28-03-2018 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 28-03-2018 IPR018215 ClpP, Ser active site CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.708 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 Pfam PF00574 Clp protease 25 205 1.2E-90 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 8.3E-112 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 28-03-2018 IPR033135 ClpP, histidine active site CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 Gene3D G3DSA:3.90.226.10 15 207 4.2E-48 T 28-03-2018 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 SUPERFAMILY SSF52096 23 206 3.98E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 5.8E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 5.8E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 5.8E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 5.8E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18180 c27fde3195d20a52d3df5a3ef4110633 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 5.8E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Gene3D G3DSA:1.10.4030.10 179 232 0.056 T 28-03-2018 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Gene3D G3DSA:1.10.4030.10 36 172 1.6E-25 T 28-03-2018 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 SUPERFAMILY SSF54534 225 355 8.5E-23 T 28-03-2018 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Gene3D G3DSA:3.10.50.40 382 496 9.8E-9 T 28-03-2018 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Gene3D G3DSA:3.10.50.40 233 381 4.9E-32 T 28-03-2018 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Pfam PF13145 PPIC-type PPIASE domain 248 369 7.6E-23 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 SUPERFAMILY SSF109998 203 241 3.22E-33 T 28-03-2018 IPR027304 Trigger factor/SurA domain CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 SUPERFAMILY SSF109998 39 169 3.22E-33 T 28-03-2018 IPR027304 Trigger factor/SurA domain CO704_RS18160 ae7917560835a88c17a813cd51edaaff 624 Pfam PF13624 SurA N-terminal domain 1 165 1.5E-52 T 28-03-2018 CO704_RS17885 d3159e7a4288d2648a1497dd78a91e03 218 Gene3D G3DSA:1.20.950.20 1 217 2.5E-54 T 28-03-2018 CO704_RS17885 d3159e7a4288d2648a1497dd78a91e03 218 SUPERFAMILY SSF81342 5 211 8.63E-54 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS17885 d3159e7a4288d2648a1497dd78a91e03 218 Pfam PF01292 Prokaryotic cytochrome b561 13 184 1.2E-17 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS17885 d3159e7a4288d2648a1497dd78a91e03 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 6.2E-65 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CO704_RS21880 ca97845f08894821f032a61eb608a974 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.1E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS21880 ca97845f08894821f032a61eb608a974 163 Gene3D G3DSA:2.30.110.20 1 162 1.5E-49 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS21880 ca97845f08894821f032a61eb608a974 163 SUPERFAMILY SSF141452 2 160 4.71E-42 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS21880 ca97845f08894821f032a61eb608a974 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.9E-49 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS23780 4247156bd52a7cce8f54926661b72dfd 374 Pfam PF00534 Glycosyl transferases group 1 184 350 3.5E-34 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS23780 4247156bd52a7cce8f54926661b72dfd 374 SUPERFAMILY SSF53756 3 353 5.58E-60 T 28-03-2018 CO704_RS23780 4247156bd52a7cce8f54926661b72dfd 374 Gene3D G3DSA:3.40.50.2000 183 355 1.2E-35 T 28-03-2018 CO704_RS23780 4247156bd52a7cce8f54926661b72dfd 374 Gene3D G3DSA:3.40.50.2000 4 182 7.2E-6 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 Gene3D G3DSA:1.20.1250.20 18 202 4.9E-21 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 Gene3D G3DSA:1.20.1250.20 264 520 4.9E-26 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 511 1.0E-119 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 6.5E-9 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 172 196 6.5E-9 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 412 431 6.5E-9 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 6.5E-9 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 6.5E-9 T 28-03-2018 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 Pfam PF07690 Major Facilitator Superfamily 28 421 2.3E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 SUPERFAMILY SSF103473 490 518 7.72E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 SUPERFAMILY SSF103473 17 207 7.72E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03185 134395e0055ba32503cafd54a3835ec8 520 SUPERFAMILY SSF103473 260 431 7.72E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS01500 e78dcc0e4609399277d9f746884a6252 88 Gene3D G3DSA:3.30.1660.10 22 88 2.1E-27 T 28-03-2018 IPR025543 Dodecin-like CO704_RS01500 e78dcc0e4609399277d9f746884a6252 88 Pfam PF07338 Protein of unknown function (DUF1471) 35 88 5.7E-24 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS01500 e78dcc0e4609399277d9f746884a6252 88 SUPERFAMILY SSF159871 3 88 5.23E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 Gene3D G3DSA:3.40.50.720 11 58 2.1E-10 T 28-03-2018 CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 Gene3D G3DSA:3.40.50.720 59 261 1.9E-54 T 28-03-2018 CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 SUPERFAMILY SSF51735 17 260 8.16E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03600 95780cbbf8fa300d3561b898ae1624a4 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 1.2E-55 T 28-03-2018 CO704_RS08770 d7a63ed392a6c010f9fb6667652755f3 216 Gene3D G3DSA:1.10.287.500 38 170 3.1E-21 T 28-03-2018 CO704_RS08770 d7a63ed392a6c010f9fb6667652755f3 216 Pfam PF04344 Chemotaxis phosphatase, CheZ 18 216 2.2E-76 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CO704_RS08770 d7a63ed392a6c010f9fb6667652755f3 216 SUPERFAMILY SSF75708 10 215 7.32E-67 T 28-03-2018 CO704_RS08770 d7a63ed392a6c010f9fb6667652755f3 216 Gene3D G3DSA:1.20.5.590 6 36 2.3E-14 T 28-03-2018 CO704_RS08770 d7a63ed392a6c010f9fb6667652755f3 216 PIRSF PIRSF002884 1 216 3.5E-87 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CO704_RS00795 c148fc4dd963fa10965b767e3d950d82 186 SUPERFAMILY SSF55811 4 181 2.84E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS00795 c148fc4dd963fa10965b767e3d950d82 186 Pfam PF00293 NUDIX domain 47 152 3.7E-14 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS00795 c148fc4dd963fa10965b767e3d950d82 186 Gene3D G3DSA:3.90.79.10 8 186 5.3E-33 T 28-03-2018 CO704_RS00795 c148fc4dd963fa10965b767e3d950d82 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS25495 0af1ffa0eada4c145547b9c1ba55f72a 280 Gene3D G3DSA:3.40.30.10 88 276 5.5E-27 T 28-03-2018 CO704_RS25495 0af1ffa0eada4c145547b9c1ba55f72a 280 SUPERFAMILY SSF52833 90 269 1.72E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS25495 0af1ffa0eada4c145547b9c1ba55f72a 280 Pfam PF13462 Thioredoxin 98 241 6.3E-12 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 2.5E-135 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.2E-91 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 1.3E-138 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CO704_RS11275 4d663374f5156377fa0b55e00c116aa8 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 Gene3D G3DSA:1.10.10.10 12 100 9.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 SUPERFAMILY SSF46785 15 99 1.61E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 Gene3D G3DSA:3.40.190.10 101 188 7.8E-11 T 28-03-2018 CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 Pfam PF03466 LysR substrate binding domain 99 306 2.1E-38 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 4.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 SUPERFAMILY SSF53850 99 306 8.14E-38 T 28-03-2018 CO704_RS07230 dd7d9fbd863455a3717f7b0239b73c79 309 Gene3D G3DSA:3.40.190.10 189 278 1.5E-21 T 28-03-2018 CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 Gene3D G3DSA:3.30.390.10 1 110 7.4E-19 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 SUPERFAMILY SSF51604 107 312 5.63E-49 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 SUPERFAMILY SSF54826 1 98 1.26E-24 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 Gene3D G3DSA:3.20.20.120 111 295 7.5E-38 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 8 307 1.3E-116 T 28-03-2018 CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 SMART SM00922 115 210 3.7E-12 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 315 23.896 T 28-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CO704_RS06650 e6c0324a43a60e62caf51e0f1644c2cd 321 Pfam PF13378 Enolase C-terminal domain-like 124 280 3.7E-14 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 1.3E-232 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 Gene3D G3DSA:3.40.1080.10 237 480 6.1E-35 T 28-03-2018 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 506 1.6E-226 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 SUPERFAMILY SSF100950 239 504 6.28E-58 T 28-03-2018 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 PIRSF PIRSF009451 13 506 3.2E-243 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 Gene3D G3DSA:3.40.1080.10 1 235 7.3E-53 T 28-03-2018 CO704_RS20505 d856b5f73d21e6cdcf09284b4451bec6 507 SUPERFAMILY SSF100950 4 234 9.42E-77 T 28-03-2018 CO704_RS16405 31175f06021658e8428e8a47ee6fa970 135 Pfam PF11076 Putative inner membrane protein YbhQ 1 131 6.4E-59 T 28-03-2018 IPR021303 Uncharacterised protein family, inner membrane, YbhQ CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Pfam PF07499 RuvA, C-terminal domain 159 201 3.1E-14 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 SUPERFAMILY SSF50249 2 63 1.03E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.567 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Gene3D G3DSA:1.10.150.280 57 80 0.0056 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Gene3D G3DSA:2.40.50.140 2 56 7.1E-22 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Gene3D G3DSA:1.10.8.10 165 202 6.0E-15 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 SUPERFAMILY SSF47781 66 137 9.39E-23 T 28-03-2018 IPR010994 RuvA domain 2-like CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 SUPERFAMILY SSF46929 157 201 8.89E-10 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.3E-17 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Gene3D G3DSA:1.10.150.20 124 164 0.06 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Gene3D G3DSA:1.10.150.20 81 123 4.4E-14 T 28-03-2018 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 Pfam PF01330 RuvA N terminal domain 2 62 4.5E-18 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 SMART SM00278 73 92 0.054 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 SMART SM00278 108 127 0.036 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CO704_RS08860 a01e886eed070edf2beddfb8d1cf68d0 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 3.3E-70 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Gene3D G3DSA:3.30.450.20 363 489 4.6E-12 T 28-03-2018 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SUPERFAMILY SSF55874 550 720 1.19E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SUPERFAMILY SSF47384 492 557 2.75E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Gene3D G3DSA:3.30.565.10 563 726 4.0E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SMART SM00387 600 718 8.9E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Gene3D G3DSA:1.10.287.130 490 555 3.1E-7 T 28-03-2018 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Gene3D G3DSA:3.40.50.2300 730 859 2.4E-18 T 28-03-2018 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SMART SM00304 315 368 7.7E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SMART SM00448 738 848 2.6E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SUPERFAMILY SSF52172 739 853 4.7E-21 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Pfam PF00672 HAMP domain 323 362 6.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SUPERFAMILY SSF158472 321 363 8.11E-8 T 28-03-2018 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 716 5.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Pfam PF00072 Response regulator receiver domain 740 848 2.3E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SUPERFAMILY SSF55785 369 470 2.07E-6 T 28-03-2018 IPR000014 PAS domain CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Pfam PF12860 PAS fold 386 476 2.1E-8 T 28-03-2018 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 661 9.5E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 675 9.5E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 696 9.5E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 715 9.5E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 SMART SM00388 497 559 2.7E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS22425 91b64d3de4a0d057c042a2e553f5f1e2 860 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 558 6.6E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 Pfam PF01032 FecCD transport family 22 326 2.3E-54 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 Pfam PF01032 FecCD transport family 358 657 1.1E-65 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 Gene3D G3DSA:1.10.3470.10 348 665 3.4E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 Gene3D G3DSA:1.10.3470.10 2 336 4.9E-36 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 SUPERFAMILY SSF81345 354 657 5.36E-58 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS18615 6707c717dba717e5ea277ef8f2927e5c 665 SUPERFAMILY SSF81345 12 326 6.15E-48 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS14815 e77d1ae38672d0160a976b4cf215795f 201 SUPERFAMILY SSF89392 21 186 1.02E-13 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CO704_RS14815 e77d1ae38672d0160a976b4cf215795f 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 185 2.8E-6 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CO704_RS14815 e77d1ae38672d0160a976b4cf215795f 201 Gene3D G3DSA:2.50.20.10 18 194 4.3E-17 T 28-03-2018 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 SUPERFAMILY SSF52540 42 353 4.87E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.8E-23 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Gene3D G3DSA:3.40.50.300 92 297 1.5E-40 T 28-03-2018 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Gene3D G3DSA:1.20.120.140 1 91 3.5E-30 T 28-03-2018 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Pfam PF02978 Signal peptide binding domain 329 427 2.3E-33 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 SMART SM00382 99 247 4.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Gene3D G3DSA:1.10.260.30 328 432 5.6E-39 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.1E-76 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.049 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 SMART SM00963 1 86 4.0E-37 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 SMART SM00962 100 296 6.3E-119 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 7.3E-181 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CO704_RS04390 8a38eb7581887928b95bd4b6ee393d96 453 SUPERFAMILY SSF47446 298 431 3.14E-46 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CO704_RS15820 453f6175675e56a248b6e269537caf01 222 Gene3D G3DSA:1.10.3720.10 2 216 2.2E-29 T 28-03-2018 CO704_RS15820 453f6175675e56a248b6e269537caf01 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.7E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS15820 453f6175675e56a248b6e269537caf01 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 215 1.7E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15820 453f6175675e56a248b6e269537caf01 222 SUPERFAMILY SSF161098 6 201 4.19E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS10935 9972b0e0c7c019966b7bf6e68320f173 354 Gene3D G3DSA:3.40.800.10 25 354 3.9E-42 T 28-03-2018 CO704_RS10935 9972b0e0c7c019966b7bf6e68320f173 354 Pfam PF00491 Arginase family 70 336 1.3E-20 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CO704_RS10935 9972b0e0c7c019966b7bf6e68320f173 354 SUPERFAMILY SSF52768 55 348 1.8E-37 T 28-03-2018 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 SUPERFAMILY SSF55200 90 179 6.93E-35 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 6.7E-31 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 SUPERFAMILY SSF54364 13 86 5.23E-29 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.568 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 Gene3D G3DSA:3.10.20.80 10 86 9.0E-32 T 28-03-2018 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 1.4E-37 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 Gene3D G3DSA:3.30.110.10 87 180 1.9E-35 T 28-03-2018 CO704_RS13825 6c6b2125604acdd73b42fa0a2a552b5f 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.8E-76 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CO704_RS23550 f5576c2df9d83658f5f919dd9960c5c2 296 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 4.5E-105 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CO704_RS23550 f5576c2df9d83658f5f919dd9960c5c2 296 SUPERFAMILY SSF51730 22 294 1.41E-96 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CO704_RS23550 f5576c2df9d83658f5f919dd9960c5c2 296 Gene3D G3DSA:3.20.20.220 1 296 1.2E-100 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CO704_RS23550 f5576c2df9d83658f5f919dd9960c5c2 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.1E-104 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CO704_RS21160 25fe85822cce39e813ef6055d399d5d2 131 SUPERFAMILY SSF52980 18 125 8.05E-22 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS21160 25fe85822cce39e813ef6055d399d5d2 131 Gene3D G3DSA:3.40.1350.10 23 131 2.0E-34 T 28-03-2018 CO704_RS21160 25fe85822cce39e813ef6055d399d5d2 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 16 128 2.7E-44 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CO704_RS21160 25fe85822cce39e813ef6055d399d5d2 131 Pfam PF02021 Uncharacterised protein family UPF0102 23 114 3.1E-26 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CO704_RS21160 25fe85822cce39e813ef6055d399d5d2 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.539 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CO704_RS18365 a805b5a37a03e3f9fedcb355ba6d3002 193 PIRSF PIRSF011489 1 193 5.0E-78 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CO704_RS18365 a805b5a37a03e3f9fedcb355ba6d3002 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 186 1.2E-30 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CO704_RS18365 a805b5a37a03e3f9fedcb355ba6d3002 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 52.339 T 28-03-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CO704_RS12900 7f6589a5222d7bc749792463fcb600d9 67 Pfam PF04328 Selenoprotein, putative 6 67 2.9E-28 T 28-03-2018 IPR007423 Selenoprotein, putative CO704_RS25820 dd25e8bbf6b2b0eeadec12e9b0d47138 434 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 403 7.0E-21 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CO704_RS17800 21d8bb29838c285b7e9a0738a16f13b5 113 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 6.7E-23 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 CO704_RS17800 21d8bb29838c285b7e9a0738a16f13b5 113 PIRSF PIRSF002599 2 110 5.3E-21 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CO704_RS23190 e0770d1d77a3a210d6a663e25f5a94f4 156 SUPERFAMILY SSF54637 12 155 5.36E-24 T 28-03-2018 IPR029069 HotDog domain CO704_RS23190 e0770d1d77a3a210d6a663e25f5a94f4 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 154 1.7E-13 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CO704_RS23190 e0770d1d77a3a210d6a663e25f5a94f4 156 Pfam PF03061 Thioesterase superfamily 58 144 5.9E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS23190 e0770d1d77a3a210d6a663e25f5a94f4 156 Gene3D G3DSA:3.10.129.10 8 155 1.6E-27 T 28-03-2018 CO704_RS18190 89999756291d66d9f7df97178085d050 105 PIRSF PIRSF003113 1 100 3.4E-32 T 28-03-2018 IPR002634 BolA protein CO704_RS18190 89999756291d66d9f7df97178085d050 105 SUPERFAMILY SSF82657 1 89 3.14E-30 T 28-03-2018 IPR002634 BolA protein CO704_RS18190 89999756291d66d9f7df97178085d050 105 Gene3D G3DSA:3.30.300.90 1 91 4.1E-28 T 28-03-2018 CO704_RS18190 89999756291d66d9f7df97178085d050 105 Pfam PF01722 BolA-like protein 11 84 9.9E-29 T 28-03-2018 IPR002634 BolA protein CO704_RS16240 0a75b1dd2822a002a28c977bcf08af34 303 SUPERFAMILY SSF53850 23 302 6.79E-58 T 28-03-2018 CO704_RS16240 0a75b1dd2822a002a28c977bcf08af34 303 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 23 298 2.6E-58 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CO704_RS16240 0a75b1dd2822a002a28c977bcf08af34 303 Gene3D G3DSA:3.40.190.10 13 171 9.1E-26 T 28-03-2018 CO704_RS16240 0a75b1dd2822a002a28c977bcf08af34 303 Gene3D G3DSA:3.40.190.10 172 300 1.2E-18 T 28-03-2018 CO704_RS17060 7ff3f4889530f02cad76749a8e251c96 92 Gene3D G3DSA:1.10.1220.10 50 90 2.0E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS17060 7ff3f4889530f02cad76749a8e251c96 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 5.2E-9 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CO704_RS16060 15d11047c8d0f4f02bd19cf43414bf5a 169 Pfam PF05932 Tir chaperone protein (CesT) family 20 126 2.1E-11 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CO704_RS16060 15d11047c8d0f4f02bd19cf43414bf5a 169 SUPERFAMILY SSF69635 18 130 8.52E-14 T 28-03-2018 CO704_RS16060 15d11047c8d0f4f02bd19cf43414bf5a 169 Gene3D G3DSA:3.30.1460.10 12 152 4.3E-19 T 28-03-2018 CO704_RS25005 1a991ee0674492512e8ade5bf01349ec 621 Pfam PF02705 K+ potassium transporter 13 543 1.4E-202 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CO704_RS25005 1a991ee0674492512e8ade5bf01349ec 621 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 4 621 32.677 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CO704_RS06845 92acc4f4faf78f1fa7d0ff30ea705dbe 526 SUPERFAMILY SSF141868 272 519 9.55E-71 T 28-03-2018 IPR001633 EAL domain CO704_RS06845 92acc4f4faf78f1fa7d0ff30ea705dbe 526 Gene3D G3DSA:3.20.20.450 265 520 1.1E-74 T 28-03-2018 IPR001633 EAL domain CO704_RS06845 92acc4f4faf78f1fa7d0ff30ea705dbe 526 Pfam PF12792 CSS motif domain associated with EAL 51 244 1.1E-35 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CO704_RS06845 92acc4f4faf78f1fa7d0ff30ea705dbe 526 Pfam PF00563 EAL domain 273 505 1.6E-67 T 28-03-2018 IPR001633 EAL domain CO704_RS06845 92acc4f4faf78f1fa7d0ff30ea705dbe 526 SMART SM00052 265 510 2.9E-97 T 28-03-2018 IPR001633 EAL domain CO704_RS13095 833394f082c8ae4dc95feeeebc3e43ec 455 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 3.9E-148 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS13095 833394f082c8ae4dc95feeeebc3e43ec 455 PIRSF PIRSF006351 4 445 1.3E-139 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS13095 833394f082c8ae4dc95feeeebc3e43ec 455 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 3.9E-148 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS13095 833394f082c8ae4dc95feeeebc3e43ec 455 Pfam PF02378 Phosphotransferase system, EIIC 29 360 9.4E-58 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 Pfam PF13463 Winged helix DNA-binding domain 58 103 4.7E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 SUPERFAMILY SSF46785 15 142 1.07E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 SMART SM00347 31 131 7.3E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS18530 a66c266b1d37e7817f7581ada59c5ff8 151 Gene3D G3DSA:1.10.10.10 20 138 1.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 Gene3D G3DSA:3.30.930.10 105 430 1.3E-95 T 28-03-2018 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 SUPERFAMILY SSF46589 1 112 6.28E-31 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.484 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 Gene3D G3DSA:1.10.287.40 2 104 3.0E-25 T 28-03-2018 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.9E-32 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 SUPERFAMILY SSF55681 116 424 8.57E-100 T 28-03-2018 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 1.1E-37 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 8.8E-179 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PIRSF PIRSF001529 1 430 2.0E-183 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 9.1E-35 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 9.1E-35 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 9.1E-35 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 9.1E-35 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS15645 df833cf8559c637b79193e65ae2ff869 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 9.1E-35 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 Gene3D G3DSA:2.40.50.100 6 129 3.1E-49 T 28-03-2018 CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 43.431 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 SUPERFAMILY SSF51230 4 128 3.61E-46 T 28-03-2018 IPR011053 Single hybrid motif CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.3E-59 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 Pfam PF01597 Glycine cleavage H-protein 8 128 3.7E-49 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CO704_RS03015 c480e768c262f1d3ed522b468c8f0e8f 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CO704_RS06230 f0ba4a13b1f2e1812d13954a3a31befc 654 SMART SM00244 323 528 3.0E-4 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06230 f0ba4a13b1f2e1812d13954a3a31befc 654 Pfam PF01145 SPFH domain / Band 7 family 327 544 1.9E-28 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06230 f0ba4a13b1f2e1812d13954a3a31befc 654 SUPERFAMILY SSF117892 425 533 1.24E-10 T 28-03-2018 IPR001107 Band 7 domain CO704_RS15040 a70778bad71f6e49d5b4b7ae00a28c6b 293 Pfam PF00753 Metallo-beta-lactamase superfamily 63 243 1.1E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15040 a70778bad71f6e49d5b4b7ae00a28c6b 293 SMART SM00849 61 246 1.7E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15040 a70778bad71f6e49d5b4b7ae00a28c6b 293 Gene3D G3DSA:3.60.15.10 35 293 3.0E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15040 a70778bad71f6e49d5b4b7ae00a28c6b 293 SUPERFAMILY SSF56281 41 250 1.28E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS23440 f1095924d3cd8b72899a6e2c42775850 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.6E-38 T 28-03-2018 IPR007335 Protein of unknown function DUF413 CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 SMART SM00382 30 229 6.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 Pfam PF00005 ABC transporter 21 181 3.5E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 SUPERFAMILY SSF52540 6 251 6.71E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 PIRSF PIRSF039085 2 257 3.3E-119 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS06405 0ae91cb9ddd235539a5948641d3a32da 257 Gene3D G3DSA:3.40.50.300 3 255 3.0E-71 T 28-03-2018 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 Gene3D G3DSA:3.40.50.300 22 238 3.3E-40 T 28-03-2018 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 Gene3D G3DSA:2.40.30.10 332 436 1.6E-18 T 28-03-2018 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 Gene3D G3DSA:2.40.30.10 239 329 1.4E-21 T 28-03-2018 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 SUPERFAMILY SSF52540 21 236 1.65E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.1E-44 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.131 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 SUPERFAMILY SSF50447 243 327 1.1E-22 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 216 1.6E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 1.9E-208 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CO704_RS03680 f1f7354e3012f0b9edb1f97db2a6d892 475 SUPERFAMILY SSF50465 336 435 8.15E-29 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CO704_RS24060 a9312c43bea8e2e145d98ed644da42db 622 TIGRFAM TIGR00794 kup: potassium uptake protein 98 550 1.3E-189 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CO704_RS24060 a9312c43bea8e2e145d98ed644da42db 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.552 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CO704_RS24060 a9312c43bea8e2e145d98ed644da42db 622 Pfam PF02705 K+ potassium transporter 14 544 2.2E-209 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 3.3E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 SUPERFAMILY SSF46894 145 212 6.8E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 Gene3D G3DSA:1.10.10.10 132 214 8.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 Gene3D G3DSA:3.40.50.2300 6 131 6.7E-30 T 28-03-2018 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 SMART SM00421 151 208 1.6E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 Pfam PF00072 Response regulator receiver domain 10 120 2.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 3.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 3.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 3.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 SUPERFAMILY SSF52172 6 136 7.26E-30 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS16065 72e6f74353481f0e865df1f31c256c61 214 SMART SM00448 7 120 2.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS05665 a8440358644a7f8280d65ac08abdbc01 292 Pfam PF04228 Putative neutral zinc metallopeptidase 1 287 1.8E-137 T 28-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 51.314 T 28-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 2.4E-19 T 28-03-2018 IPR019903 Repair of iron centres family CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 4.7E-27 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 Gene3D G3DSA:1.10.3910.10 3 60 3.2E-10 T 28-03-2018 CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 2.0E-79 T 28-03-2018 IPR019903 Repair of iron centres family CO704_RS20825 0f378010f24d66dc2c5568f69b010a56 220 Gene3D G3DSA:1.20.120.520 61 218 1.6E-32 T 28-03-2018 CO704_RS06630 2e148e84ca446880e4884854596885a2 433 Pfam PF00425 chorismate binding enzyme 169 420 8.9E-62 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CO704_RS06630 2e148e84ca446880e4884854596885a2 433 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 426 3.0E-102 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CO704_RS06630 2e148e84ca446880e4884854596885a2 433 SUPERFAMILY SSF56322 23 428 1.7E-95 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS06630 2e148e84ca446880e4884854596885a2 433 Gene3D G3DSA:3.60.120.10 1 429 5.5E-90 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CO704_RS06630 2e148e84ca446880e4884854596885a2 433 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 430 29.332 T 28-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CO704_RS15995 376898f7c914cc3c4474dcd152dcac61 313 PIRSF PIRSF029038 1 312 2.0E-145 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CO704_RS15995 376898f7c914cc3c4474dcd152dcac61 313 Gene3D G3DSA:3.40.50.150 41 300 5.4E-52 T 28-03-2018 CO704_RS15995 376898f7c914cc3c4474dcd152dcac61 313 SUPERFAMILY SSF53335 47 299 2.96E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS15995 376898f7c914cc3c4474dcd152dcac61 313 Pfam PF05971 Protein of unknown function (DUF890) 7 300 6.7E-139 T 28-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CO704_RS15995 376898f7c914cc3c4474dcd152dcac61 313 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 8 302 52.934 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CO704_RS20660 c9fb71526e24010cadb21babfb79c55d 470 Gene3D G3DSA:3.20.20.140 90 467 5.8E-152 T 28-03-2018 CO704_RS20660 c9fb71526e24010cadb21babfb79c55d 470 SUPERFAMILY SSF51556 3 465 8.16E-179 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS20660 c9fb71526e24010cadb21babfb79c55d 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.032 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CO704_RS20660 c9fb71526e24010cadb21babfb79c55d 470 Gene3D G3DSA:3.20.20.140 3 89 2.4E-25 T 28-03-2018 CO704_RS20660 c9fb71526e24010cadb21babfb79c55d 470 Pfam PF02614 Glucuronate isomerase 1 465 2.5E-225 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CO704_RS16215 3b58920fb4035060711a7ef2154cbdd2 373 SUPERFAMILY SSF51197 6 291 1.33E-71 T 28-03-2018 CO704_RS16215 3b58920fb4035060711a7ef2154cbdd2 373 SMART SM00558 92 215 1.2E-5 T 28-03-2018 IPR003347 JmjC domain CO704_RS16215 3b58920fb4035060711a7ef2154cbdd2 373 Pfam PF08007 Cupin superfamily protein 10 310 2.0E-100 T 28-03-2018 IPR003347 JmjC domain CO704_RS16215 3b58920fb4035060711a7ef2154cbdd2 373 Gene3D G3DSA:2.60.120.650 5 209 7.7E-26 T 28-03-2018 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 Gene3D G3DSA:3.90.550.10 20 338 1.4E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.3E-156 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 SUPERFAMILY SSF53448 20 294 4.93E-78 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 Gene3D G3DSA:2.160.10.10 339 423 6.3E-8 T 28-03-2018 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 Pfam PF00483 Nucleotidyl transferase 22 291 6.6E-70 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.497 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 SUPERFAMILY SSF51161 312 411 5.68E-19 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CO704_RS00660 76651bb153a5460792fa28b5026e286f 427 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 Gene3D G3DSA:1.20.1250.20 4 205 3.0E-32 T 28-03-2018 CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 SUPERFAMILY SSF103473 477 504 3.4E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 SUPERFAMILY SSF103473 251 422 3.4E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 SUPERFAMILY SSF103473 8 203 3.4E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 Pfam PF07690 Major Facilitator Superfamily 24 410 1.4E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS00030 2df2e052ed9b85601a6c3c93ad638320 510 Gene3D G3DSA:1.20.1250.20 254 510 1.5E-24 T 28-03-2018 CO704_RS03510 e76e1e2df35544739f945af421002feb 259 SUPERFAMILY SSF55120 2 238 3.68E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03510 e76e1e2df35544739f945af421002feb 259 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.0E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS03510 e76e1e2df35544739f945af421002feb 259 Gene3D G3DSA:3.30.2350.10 1 237 2.0E-62 T 28-03-2018 CO704_RS03510 e76e1e2df35544739f945af421002feb 259 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 SUPERFAMILY SSF51182 1 374 2.19E-102 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 Gene3D G3DSA:2.60.120.10 1 295 1.3E-79 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 8.7E-74 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 Pfam PF01238 Phosphomannose isomerase type I 1 355 2.9E-111 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 4 381 3.3E-126 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 Gene3D G3DSA:2.60.120.10 296 391 9.6E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS13260 42fb96658a8f5dc075d47ae67eff26a3 391 PIRSF PIRSF001480 1 391 3.0E-110 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CO704_RS18990 a86f7c644cf9e045645d1ab41659216f 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.0E-84 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CO704_RS18990 a86f7c644cf9e045645d1ab41659216f 193 SUPERFAMILY SSF53697 1 189 2.22E-52 T 28-03-2018 CO704_RS18990 a86f7c644cf9e045645d1ab41659216f 193 Gene3D G3DSA:3.40.50.10490 1 193 7.6E-42 T 28-03-2018 CO704_RS18990 a86f7c644cf9e045645d1ab41659216f 193 Pfam PF13580 SIS domain 12 146 4.5E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS18990 a86f7c644cf9e045645d1ab41659216f 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.951 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 Gene3D G3DSA:3.40.605.10 1 264 3.4E-85 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 Pfam PF00171 Aldehyde dehydrogenase family 13 469 1.2E-151 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 SUPERFAMILY SSF53720 2 472 1.02E-146 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS06060 d3679c8f86259bbd7427fdd6b5f62c00 475 Gene3D G3DSA:3.40.309.10 265 455 1.1E-64 T 28-03-2018 CO704_RS17190 3faf48338c6095b6155191ea0afe2185 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 238 4.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17190 3faf48338c6095b6155191ea0afe2185 246 SUPERFAMILY SSF161098 24 223 6.28E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17190 3faf48338c6095b6155191ea0afe2185 246 Gene3D G3DSA:1.10.3720.10 18 237 2.7E-38 T 28-03-2018 CO704_RS17190 3faf48338c6095b6155191ea0afe2185 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.0E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS05640 9f8126c47ab8f34916af7d50c207ed9d 156 SUPERFAMILY SSF52833 3 153 4.62E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS05640 9f8126c47ab8f34916af7d50c207ed9d 156 PIRSF PIRSF000239 1 145 4.5E-17 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS05640 9f8126c47ab8f34916af7d50c207ed9d 156 Gene3D G3DSA:3.40.30.10 1 154 5.2E-41 T 28-03-2018 CO704_RS05640 9f8126c47ab8f34916af7d50c207ed9d 156 Pfam PF00578 AhpC/TSA family 7 134 6.3E-38 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS09080 546a636cc9a5490ce97526a2b2486bf2 93 Pfam PF13974 YebO-like protein 16 93 1.3E-30 T 28-03-2018 IPR025594 YebO-like protein CO704_RS06590 3d4e508d2157b0562e67a08129724c5c 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.538 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CO704_RS06590 3d4e508d2157b0562e67a08129724c5c 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.8E-20 T 28-03-2018 CO704_RS02520 1f172f0a3a317f59d7b60737022f079e 293 Gene3D G3DSA:1.10.3720.10 28 285 1.8E-18 T 28-03-2018 CO704_RS02520 1f172f0a3a317f59d7b60737022f079e 293 SUPERFAMILY SSF161098 84 272 3.92E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02520 1f172f0a3a317f59d7b60737022f079e 293 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 30 281 4.3E-75 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CO704_RS10990 a0bf50fb3340907ce70254ed9b707eae 252 Gene3D G3DSA:3.40.50.2000 17 208 2.1E-6 T 28-03-2018 CO704_RS10990 a0bf50fb3340907ce70254ed9b707eae 252 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 23 241 7.0E-68 T 28-03-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CO704_RS10990 a0bf50fb3340907ce70254ed9b707eae 252 SUPERFAMILY SSF53623 17 93 2.2E-6 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 207 222 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PRINTS PR01469 Bacterial carbamate kinase signature 258 273 2.0E-63 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 TIGRFAM TIGR00746 arcC: carbamate kinase 6 301 4.1E-117 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 SUPERFAMILY SSF53633 6 301 1.44E-76 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 Pfam PF00696 Amino acid kinase family 6 276 4.4E-26 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 Gene3D G3DSA:3.40.1160.10 3 303 4.1E-49 T 28-03-2018 CO704_RS01980 69ff06ff4d49a5b3d590e25786c253c6 304 PIRSF PIRSF000723 3 303 2.0E-114 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CO704_RS00785 8a19fd4cc33efa4a60ec9281552b94f2 223 Pfam PF12710 haloacid dehalogenase-like hydrolase 14 139 1.7E-6 T 28-03-2018 CO704_RS00785 8a19fd4cc33efa4a60ec9281552b94f2 223 Gene3D G3DSA:3.40.50.1000 44 204 1.5E-19 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00785 8a19fd4cc33efa4a60ec9281552b94f2 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 6.6E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS00785 8a19fd4cc33efa4a60ec9281552b94f2 223 SUPERFAMILY SSF56784 6 217 1.13E-41 T 28-03-2018 IPR023214 HAD-like domain CO704_RS00785 8a19fd4cc33efa4a60ec9281552b94f2 223 Gene3D G3DSA:3.40.50.1000 5 43 0.18 T 28-03-2018 IPR023214 HAD-like domain CO704_RS12955 6355d5c3c84a2fc4705f772b2e4e4f93 190 Gene3D G3DSA:3.40.50.300 4 186 9.2E-11 T 28-03-2018 CO704_RS12955 6355d5c3c84a2fc4705f772b2e4e4f93 190 Pfam PF01202 Shikimate kinase 16 113 2.2E-10 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS12955 6355d5c3c84a2fc4705f772b2e4e4f93 190 SUPERFAMILY SSF52540 5 158 4.11E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10015 45c2bec64595796cd4f1cbf0b0002f1e 131 Pfam PF06252 Protein of unknown function (DUF1018) 18 127 6.6E-23 T 28-03-2018 IPR009363 Bacteriophage Mu, Gp16 CO704_RS12290 45c2bec64595796cd4f1cbf0b0002f1e 131 Pfam PF06252 Protein of unknown function (DUF1018) 18 127 6.6E-23 T 28-03-2018 IPR009363 Bacteriophage Mu, Gp16 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 353 363 1.1E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 541 549 1.1E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 442 461 1.1E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 494 1.1E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 385 392 1.1E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Gene3D G3DSA:2.30.110.10 169 302 1.4E-14 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 SUPERFAMILY SSF52343 422 571 8.25E-30 T 28-03-2018 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00406 Cytochrome B5 reductase signature 442 461 1.9E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00406 Cytochrome B5 reductase signature 385 392 1.9E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00406 Cytochrome B5 reductase signature 483 494 1.9E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 PRINTS PR00406 Cytochrome B5 reductase signature 419 433 1.9E-8 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Gene3D G3DSA:3.10.20.30 572 681 3.6E-17 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Gene3D G3DSA:2.40.30.10 330 432 3.9E-22 T 28-03-2018 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 SUPERFAMILY SSF63380 331 431 1.34E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 SUPERFAMILY SSF54292 565 673 7.68E-16 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 615 673 4.2E-8 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 SUPERFAMILY SSF50475 175 275 1.02E-7 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Pfam PF00175 Oxidoreductase NAD-binding domain 443 552 5.8E-12 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Pfam PF00970 Oxidoreductase FAD-binding domain 337 431 2.3E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 634 642 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Gene3D G3DSA:3.40.50.80 433 571 4.3E-23 T 28-03-2018 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 173 268 3.4E-11 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CO704_RS00935 74e6ad7a2bfc1d6199265f15064cf66c 688 Gene3D G3DSA:2.30.110.10 30 141 0.042 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS03105 b79d75d688573a5de881991e3afcf634 577 Gene3D G3DSA:3.90.1640.10 52 246 1.2E-20 T 28-03-2018 CO704_RS03105 b79d75d688573a5de881991e3afcf634 577 SUPERFAMILY SSF64182 48 467 7.59E-116 T 28-03-2018 CO704_RS03105 b79d75d688573a5de881991e3afcf634 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 7.7E-162 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CO704_RS03105 b79d75d688573a5de881991e3afcf634 577 Pfam PF01368 DHH family 74 201 1.2E-8 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CO704_RS03105 b79d75d688573a5de881991e3afcf634 577 Pfam PF02272 DHHA1 domain 322 451 2.9E-27 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CO704_RS05105 cbc7dce36fed07c55f3ec1ff9f78e450 209 Gene3D G3DSA:1.10.3720.10 6 204 3.6E-19 T 28-03-2018 CO704_RS05105 cbc7dce36fed07c55f3ec1ff9f78e450 209 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 200 4.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05105 cbc7dce36fed07c55f3ec1ff9f78e450 209 SUPERFAMILY SSF161098 14 197 6.67E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 Gene3D G3DSA:2.20.25.10 203 238 8.2E-8 T 28-03-2018 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 SMART SM00448 2 112 8.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 SUPERFAMILY SSF52172 1 131 2.56E-33 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 SMART SM00850 143 238 8.9E-26 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 Gene3D G3DSA:2.40.50.40 135 201 2.1E-6 T 28-03-2018 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.9E-23 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CO704_RS12910 713968fa7f0c78e7f3dd5cd0d30145d5 239 Gene3D G3DSA:3.40.50.2300 1 134 3.3E-31 T 28-03-2018 CO704_RS21120 6373291e3592ac7c39b12a06116c81aa 144 Gene3D G3DSA:3.40.50.510 1 144 2.1E-32 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS21120 6373291e3592ac7c39b12a06116c81aa 144 SUPERFAMILY SSF53062 1 125 4.06E-35 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS21120 6373291e3592ac7c39b12a06116c81aa 144 Pfam PF03610 PTS system fructose IIA component 4 115 1.3E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS20655 dff507ab528737666cc305d29680deb9 495 SMART SM00858 10 81 2.7E-12 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CO704_RS20655 dff507ab528737666cc305d29680deb9 495 Pfam PF08666 SAF domain 10 81 1.6E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CO704_RS20655 dff507ab528737666cc305d29680deb9 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 8.4E-151 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 167 1.9E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 Gene3D G3DSA:2.170.130.10 20 175 4.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 28-03-2018 IPR010916 TonB box, conserved site CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 725 1.4E-138 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 Pfam PF00593 TonB dependent receptor 267 723 1.6E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 SUPERFAMILY SSF56935 55 725 3.4E-125 T 28-03-2018 CO704_RS09310 57a9b2a4cac99eff750e9317db76588d 725 Gene3D G3DSA:2.40.170.20 181 725 6.6E-76 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS03625 d60464c1f94fd3b845798c43b60483da 191 PIRSF PIRSF016897 1 190 1.7E-66 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CO704_RS03625 d60464c1f94fd3b845798c43b60483da 191 SUPERFAMILY SSF110391 11 185 4.32E-56 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CO704_RS03625 d60464c1f94fd3b845798c43b60483da 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 13 184 4.6E-64 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CO704_RS03625 d60464c1f94fd3b845798c43b60483da 191 Gene3D G3DSA:3.20.20.400 3 185 1.8E-67 T 28-03-2018 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 Gene3D G3DSA:1.20.91.10 239 320 3.7E-6 T 28-03-2018 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 Pfam PF02254 TrkA-N domain 421 534 1.9E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 Gene3D G3DSA:3.40.50.720 416 550 1.1E-15 T 28-03-2018 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 5.5E-76 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 4.4E-77 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CO704_RS05445 d020afe1e3b0fc20fffde11fbdd14f83 558 SUPERFAMILY SSF51735 418 548 1.03E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS06980 0766deddd757f27daf957c79632b8d48 262 SMART SM00382 30 215 4.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06980 0766deddd757f27daf957c79632b8d48 262 Gene3D G3DSA:3.40.50.300 2 245 5.2E-51 T 28-03-2018 CO704_RS06980 0766deddd757f27daf957c79632b8d48 262 Pfam PF00005 ABC transporter 27 165 8.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06980 0766deddd757f27daf957c79632b8d48 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06980 0766deddd757f27daf957c79632b8d48 262 SUPERFAMILY SSF52540 5 229 1.5E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS18525 dd0fb837a56cebf8f4ae45ba27daaafe 194 Gene3D G3DSA:3.10.450.50 2 132 1.9E-18 T 28-03-2018 CO704_RS18525 dd0fb837a56cebf8f4ae45ba27daaafe 194 SUPERFAMILY SSF54427 1 137 1.23E-20 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS18525 dd0fb837a56cebf8f4ae45ba27daaafe 194 Pfam PF13577 SnoaL-like domain 5 125 2.0E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CO704_RS04015 7a941e8af65ab1d55bc43ce7e6727c3e 174 SMART SM00450 6 103 7.9E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04015 7a941e8af65ab1d55bc43ce7e6727c3e 174 Pfam PF11127 Protein of unknown function (DUF2892) 116 171 5.7E-10 T 28-03-2018 IPR021309 Protein of unknown function DUF2892 CO704_RS04015 7a941e8af65ab1d55bc43ce7e6727c3e 174 Gene3D G3DSA:3.40.250.10 2 122 6.3E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04015 7a941e8af65ab1d55bc43ce7e6727c3e 174 Pfam PF00581 Rhodanese-like domain 8 99 1.4E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS04015 7a941e8af65ab1d55bc43ce7e6727c3e 174 SUPERFAMILY SSF52821 2 155 9.69E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS20245 f803b45a0ef00a222767cc20273fd5ef 246 PIRSF PIRSF001273 1 246 2.5E-68 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CO704_RS20245 f803b45a0ef00a222767cc20273fd5ef 246 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 30 244 2.4E-79 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CO704_RS20245 f803b45a0ef00a222767cc20273fd5ef 246 Gene3D G3DSA:3.30.428.30 28 244 4.6E-80 T 28-03-2018 CO704_RS20245 f803b45a0ef00a222767cc20273fd5ef 246 SUPERFAMILY SSF54197 30 245 7.82E-78 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 SUPERFAMILY SSF110324 2 82 1.53E-34 T 28-03-2018 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 Gene3D G3DSA:2.40.50.100 20 84 3.2E-31 T 28-03-2018 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 7.2E-44 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-18 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.171 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.3E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.9E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.9E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01720 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.9E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 Pfam PF06969 HemN C-terminal domain 304 364 8.4E-7 T 28-03-2018 IPR010723 HemN, C-terminal CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 9.5E-148 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 Pfam PF04055 Radical SAM superfamily 11 179 2.3E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 Gene3D G3DSA:3.20.20.70 5 319 6.5E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 SUPERFAMILY SSF102114 5 376 3.4E-112 T 28-03-2018 CO704_RS02765 72bd2ec6d69c2cd02fda40deae3e2c40 380 SMART SM00729 6 223 1.2E-56 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS20890 8cee240c04d82ba427d13c44c331abfa 101 SUPERFAMILY SSF52794 3 90 1.07E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS20890 8cee240c04d82ba427d13c44c331abfa 101 Gene3D G3DSA:3.40.50.2300 1 97 5.2E-16 T 28-03-2018 CO704_RS20890 8cee240c04d82ba427d13c44c331abfa 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 82 5.0E-13 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS00390 bf2200f56c4ead3ebba950cad93ee340 329 Pfam PF04773 FecR protein 118 215 4.2E-19 T 28-03-2018 IPR006860 FecR protein CO704_RS00390 bf2200f56c4ead3ebba950cad93ee340 329 Pfam PF16220 Domain of unknown function (DUF4880) 21 62 1.1E-12 T 28-03-2018 IPR032623 FecR, N-terminal CO704_RS00390 bf2200f56c4ead3ebba950cad93ee340 329 PIRSF PIRSF018266 9 328 1.4E-83 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CO704_RS10200 516314a27a8df68479f657da695a15e0 241 ProSitePatterns PS00018 EF-hand calcium-binding domain. 183 195 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CO704_RS10200 516314a27a8df68479f657da695a15e0 241 Gene3D G3DSA:3.30.2420.10 166 241 1.8E-17 T 28-03-2018 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 Pfam PF16031 TonB N-terminal region 33 159 8.7E-30 T 28-03-2018 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 SUPERFAMILY SSF74653 156 223 2.49E-18 T 28-03-2018 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 93 103 3.7E-34 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 178 3.7E-34 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 196 3.7E-34 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 197 214 3.7E-34 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 234 4.7E-16 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS10200 516314a27a8df68479f657da695a15e0 241 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 163 234 1.7E-19 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS06900 c5fc156e14a911a08f3c65d3a775fe5a 394 Gene3D G3DSA:1.20.1250.20 2 209 2.8E-20 T 28-03-2018 CO704_RS06900 c5fc156e14a911a08f3c65d3a775fe5a 394 Pfam PF07690 Major Facilitator Superfamily 21 303 2.0E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS06900 c5fc156e14a911a08f3c65d3a775fe5a 394 SUPERFAMILY SSF103473 19 391 1.44E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06900 c5fc156e14a911a08f3c65d3a775fe5a 394 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 393 8.5E-183 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CO704_RS06900 c5fc156e14a911a08f3c65d3a775fe5a 394 Gene3D G3DSA:1.20.1250.20 210 393 6.7E-24 T 28-03-2018 CO704_RS22670 c3bb22f92d56159873cbc67ecd5770c5 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.061 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CO704_RS22670 c3bb22f92d56159873cbc67ecd5770c5 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site CO704_RS22670 c3bb22f92d56159873cbc67ecd5770c5 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 288 1.2E-110 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CO704_RS22670 c3bb22f92d56159873cbc67ecd5770c5 290 Pfam PF01040 UbiA prenyltransferase family 28 271 4.7E-68 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CO704_RS20430 4f0a0c18289265bdb4b1c4a461e57731 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.7E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS20430 4f0a0c18289265bdb4b1c4a461e57731 104 SUPERFAMILY SSF52794 1 103 8.89E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS20430 4f0a0c18289265bdb4b1c4a461e57731 104 Gene3D G3DSA:3.40.50.2300 2 104 4.2E-34 T 28-03-2018 CO704_RS16995 3aa547ede2a8b7c81419d3def0c48d46 220 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 208 3.0E-47 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS16995 3aa547ede2a8b7c81419d3def0c48d46 220 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 17 211 1.8E-22 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CO704_RS16995 3aa547ede2a8b7c81419d3def0c48d46 220 PIRSF PIRSF012337 3 220 1.4E-60 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS12420 3aa547ede2a8b7c81419d3def0c48d46 220 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 208 3.0E-47 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS12420 3aa547ede2a8b7c81419d3def0c48d46 220 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 17 211 1.8E-22 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CO704_RS12420 3aa547ede2a8b7c81419d3def0c48d46 220 PIRSF PIRSF012337 3 220 1.4E-60 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 SUPERFAMILY SSF53697 99 273 2.22E-21 T 28-03-2018 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 SUPERFAMILY SSF46689 3 74 1.08E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 Gene3D G3DSA:3.40.50.10490 77 271 1.8E-22 T 28-03-2018 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 74 1.6E-11 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 Pfam PF01380 SIS domain 129 244 1.5E-13 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS08450 aab646454fbbc27496780401c2e71cd9 284 Gene3D G3DSA:1.10.10.10 3 76 5.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19970 bc192dfae5278eec2627800ccb0bd218 22 Hamap MF_01907 thr operon leader peptide [thrL]. 1 22 11.068 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CO704_RS19970 bc192dfae5278eec2627800ccb0bd218 22 Pfam PF08254 Threonine leader peptide 1 22 1.1E-11 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CO704_RS19970 bc192dfae5278eec2627800ccb0bd218 22 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 3 22 1.2E-8 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 PIRSF PIRSF039085 20 264 2.0E-103 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 Pfam PF00005 ABC transporter 41 188 9.7E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 SUPERFAMILY SSF52540 25 258 3.39E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 Gene3D G3DSA:3.40.50.300 20 274 3.9E-77 T 28-03-2018 CO704_RS14135 480872e9819426cbb6fed4be6e70d95a 274 SMART SM00382 48 236 1.8E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 4.9E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 4.9E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 4.9E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 Gene3D G3DSA:1.10.10.10 71 197 4.1E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 SUPERFAMILY SSF46894 124 193 1.05E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 187 4.8E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS24955 8fc248f7b3dba9f6972bceaffd7da9d5 223 SMART SM00421 135 192 2.3E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS01660 1c07141c73966773ba6d3cae4d77fd51 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 1.1E-26 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CO704_RS01660 1c07141c73966773ba6d3cae4d77fd51 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 1.3E-27 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CO704_RS01660 1c07141c73966773ba6d3cae4d77fd51 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.5E-91 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CO704_RS05785 621e20b4fd2c7dd70679924107afc781 299 SUPERFAMILY SSF54909 1 297 8.4E-88 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS05785 621e20b4fd2c7dd70679924107afc781 299 Pfam PF04261 Dyp-type peroxidase family 5 295 2.1E-93 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CO704_RS05785 621e20b4fd2c7dd70679924107afc781 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 2.3E-87 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 Gene3D G3DSA:3.40.190.10 96 177 4.4E-11 T 28-03-2018 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 SUPERFAMILY SSF53850 94 293 4.16E-30 T 28-03-2018 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 SUPERFAMILY SSF46785 4 84 6.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 1.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 Gene3D G3DSA:3.40.190.10 178 261 5.7E-20 T 28-03-2018 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.2E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 Gene3D G3DSA:1.10.10.10 6 88 1.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12810 75c9fef609fd8d9344f76b6deb82a93b 300 Pfam PF03466 LysR substrate binding domain 93 290 1.5E-29 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS10355 323848bab80278584d29b06ca82186ee 101 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 5.4E-21 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CO704_RS10355 323848bab80278584d29b06ca82186ee 101 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.66 T 28-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CO704_RS18740 d44bd17b8481d0896a7a4f1a9c900aa1 175 Pfam PF00419 Fimbrial protein 27 175 1.4E-20 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18740 d44bd17b8481d0896a7a4f1a9c900aa1 175 Gene3D G3DSA:2.60.40.1090 24 175 1.2E-34 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS18740 d44bd17b8481d0896a7a4f1a9c900aa1 175 SUPERFAMILY SSF49401 32 175 6.96E-33 T 28-03-2018 IPR008966 Adhesion domain CO704_RS02250 7a5905fd1d8d6820d0151b509fcd1175 150 Gene3D G3DSA:2.160.10.10 75 149 6.1E-17 T 28-03-2018 CO704_RS02250 7a5905fd1d8d6820d0151b509fcd1175 150 SUPERFAMILY SSF51161 25 148 1.66E-28 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS02250 7a5905fd1d8d6820d0151b509fcd1175 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 60 3.4E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS02250 7a5905fd1d8d6820d0151b509fcd1175 150 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 98 131 5.4E-5 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS02250 7a5905fd1d8d6820d0151b509fcd1175 150 Gene3D G3DSA:2.160.10.10 1 74 9.9E-14 T 28-03-2018 CO704_RS01875 d2b043294390b5777bf5fe7cdea1d9ec 142 Gene3D G3DSA:2.30.110.10 1 142 1.3E-11 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS01875 d2b043294390b5777bf5fe7cdea1d9ec 142 SUPERFAMILY SSF50475 7 140 1.35E-13 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS01875 d2b043294390b5777bf5fe7cdea1d9ec 142 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 32.703 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 CO704_RS01875 d2b043294390b5777bf5fe7cdea1d9ec 142 PIRSF PIRSF009554 1 142 3.8E-53 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 CO704_RS20260 82a7a93b012c1400bee4c2f1f9c05b9d 447 Pfam PF00860 Permease family 31 392 8.2E-27 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS25695 ea7a9df0ed0eb8d413bff344c6103c97 192 Gene3D G3DSA:3.90.470.20 20 98 2.0E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS25695 ea7a9df0ed0eb8d413bff344c6103c97 192 Gene3D G3DSA:3.90.470.20 99 186 2.2E-8 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS25695 ea7a9df0ed0eb8d413bff344c6103c97 192 SUPERFAMILY SSF56214 87 179 5.89E-15 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS25695 ea7a9df0ed0eb8d413bff344c6103c97 192 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 87 161 5.2E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS25695 ea7a9df0ed0eb8d413bff344c6103c97 192 SUPERFAMILY SSF56214 29 79 9.42E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CO704_RS25620 d32ef1fb713c98c7e5947f616434c868 257 SUPERFAMILY SSF69593 56 251 4.71E-26 T 28-03-2018 CO704_RS25620 d32ef1fb713c98c7e5947f616434c868 257 SMART SM00563 86 194 1.2E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS25620 d32ef1fb713c98c7e5947f616434c868 257 Pfam PF01553 Acyltransferase 73 193 6.6E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS25620 d32ef1fb713c98c7e5947f616434c868 257 Gene3D G3DSA:3.40.1130.10 32 254 4.0E-28 T 28-03-2018 CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 Gene3D G3DSA:3.40.50.2300 256 518 1.0E-41 T 28-03-2018 CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 Gene3D G3DSA:3.40.50.2300 536 684 8.4E-17 T 28-03-2018 CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 Pfam PF04348 LppC putative lipoprotein 42 302 2.1E-47 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 Pfam PF04348 LppC putative lipoprotein 370 691 1.3E-90 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 SUPERFAMILY SSF53822 258 286 1.88E-73 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 SUPERFAMILY SSF53822 541 696 1.88E-73 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 SUPERFAMILY SSF53822 372 502 1.88E-73 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS21155 f26984a6d7ec49a7a7ee16278d3cbaaf 697 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 691 35.855 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 Pfam PF00924 Mechanosensitive ion channel 587 783 1.7E-40 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 Gene3D G3DSA:1.20.120.330 22 174 0.0018 T 28-03-2018 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 Pfam PF12607 Protein of unknown function (DUF3772) 138 196 3.2E-12 T 28-03-2018 IPR022249 Domain of unknown function DUF3772 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 SUPERFAMILY SSF82689 701 795 3.92E-12 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 SUPERFAMILY SSF82861 543 626 2.35E-10 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 SUPERFAMILY SSF50182 628 692 2.09E-15 T 28-03-2018 IPR010920 LSM domain CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 Gene3D G3DSA:2.30.30.60 643 691 3.0E-13 T 28-03-2018 CO704_RS14315 581baa2f1fd0dacc62a3c37663ed7499 808 Gene3D G3DSA:3.30.70.100 694 789 1.8E-9 T 28-03-2018 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 SUPERFAMILY SSF54909 62 151 6.3E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 2.7E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 2.7E-16 T 28-03-2018 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 3.7E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 3.7E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 3.7E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 SUPERFAMILY SSF46785 2 61 2.84E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 SMART SM00344 2 111 1.2E-37 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 Gene3D G3DSA:3.30.70.920 55 148 2.3E-27 T 28-03-2018 CO704_RS18125 91146da6533f0d0fa86249ed51ef108d 153 Gene3D G3DSA:1.10.10.10 3 54 2.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 Gene3D G3DSA:3.30.70.20 55 84 4.0E-10 T 28-03-2018 CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 Gene3D G3DSA:3.30.70.20 21 54 3.8E-7 T 28-03-2018 CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 Pfam PF13247 4Fe-4S dicluster domain 47 97 7.4E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 Gene3D G3DSA:3.30.70.20 1 20 0.018 T 28-03-2018 CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 SUPERFAMILY SSF54862 136 182 4.71E-40 T 28-03-2018 CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 SUPERFAMILY SSF54862 2 101 4.71E-40 T 28-03-2018 CO704_RS24245 607c2ebe2803727548d68c8ed27fe44f 201 Gene3D G3DSA:3.30.70.20 85 196 2.0E-16 T 28-03-2018 CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 SUPERFAMILY SSF54631 192 329 2.91E-24 T 28-03-2018 CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 Pfam PF01595 Domain of unknown function DUF21 13 184 2.5E-49 T 28-03-2018 IPR002550 Domain of unknown function DUF21 CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 SMART SM01091 342 420 1.4E-25 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 Pfam PF00571 CBS domain 270 326 4.0E-5 T 28-03-2018 IPR000644 CBS domain CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 Gene3D G3DSA:3.30.465.10 338 428 5.3E-20 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 Pfam PF03471 Transporter associated domain 344 419 1.7E-19 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 SUPERFAMILY SSF56176 340 422 1.31E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS04380 8bb48944fa45a904d382f1858d61ac2b 428 Gene3D G3DSA:3.10.580.10 185 337 2.0E-21 T 28-03-2018 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 SUPERFAMILY SSF51445 1 460 5.96E-162 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS22285 83839ad336e92150baeb5333c133005d 467 Pfam PF00232 Glycosyl hydrolase family 1 3 459 4.9E-133 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 1.9E-13 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 1.9E-13 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 1.9E-13 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.9E-13 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 1.9E-13 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CO704_RS22285 83839ad336e92150baeb5333c133005d 467 Gene3D G3DSA:3.20.20.80 3 459 3.6E-148 T 28-03-2018 CO704_RS00130 9770a00d8ca5bd24f969677183033538 228 Gene3D G3DSA:3.20.20.70 1 220 1.8E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS00130 9770a00d8ca5bd24f969677183033538 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00130 9770a00d8ca5bd24f969677183033538 228 SUPERFAMILY SSF51366 3 199 8.37E-53 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS00130 9770a00d8ca5bd24f969677183033538 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS00130 9770a00d8ca5bd24f969677183033538 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 7.0E-62 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 4.6E-12 T 28-03-2018 IPR003004 GspF/PilC family CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 4.6E-12 T 28-03-2018 IPR003004 GspF/PilC family CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 4.6E-12 T 28-03-2018 IPR003004 GspF/PilC family CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 4.6E-12 T 28-03-2018 IPR003004 GspF/PilC family CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 Pfam PF00482 Type II secretion system (T2SS), protein F 273 390 1.6E-28 T 28-03-2018 IPR018076 Type II secretion system F domain CO704_RS19565 2465035437a577a637fd8e666e5f7318 402 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 6.4E-31 T 28-03-2018 IPR018076 Type II secretion system F domain CO704_RS09020 7751cd5d0cf3f31989b14a44c1905dd5 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 6.6E-41 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 CO704_RS09020 7751cd5d0cf3f31989b14a44c1905dd5 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 7.0E-32 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 SUPERFAMILY SSF81273 2 58 2.16E-17 T 28-03-2018 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 SUPERFAMILY SSF81273 92 133 5.1E-11 T 28-03-2018 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 Gene3D G3DSA:4.10.430.10 93 133 1.3E-17 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 Gene3D G3DSA:1.10.287.1050 1 57 5.8E-24 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 SMART SM00528 87 134 9.5E-22 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 Pfam PF00816 H-NS histone family 33 128 3.8E-18 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CO704_RS25590 ee3a78481e6c4a17194ba79687f00c18 134 PIRSF PIRSF002096 1 134 1.9E-53 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CO704_RS08875 38e18c906ffa6c1bf210a94a2f69c206 250 Gene3D G3DSA:3.40.50.300 1 224 2.2E-55 T 28-03-2018 CO704_RS08875 38e18c906ffa6c1bf210a94a2f69c206 250 Pfam PF00005 ABC transporter 20 149 1.3E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS08875 38e18c906ffa6c1bf210a94a2f69c206 250 SUPERFAMILY SSF52540 4 224 1.72E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS08875 38e18c906ffa6c1bf210a94a2f69c206 250 SMART SM00382 29 199 7.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15330 100fa33ae452a123329551f24cfea219 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 36.811 T 28-03-2018 IPR022866 Heat shock protein HspQ CO704_RS15330 100fa33ae452a123329551f24cfea219 105 SUPERFAMILY SSF141255 4 95 1.31E-28 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CO704_RS15330 100fa33ae452a123329551f24cfea219 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 8.5E-33 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CO704_RS15330 100fa33ae452a123329551f24cfea219 105 Gene3D G3DSA:2.30.30.390 1 105 2.5E-19 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CO704_RS15330 100fa33ae452a123329551f24cfea219 105 SMART SM00992 3 102 9.9E-34 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CO704_RS15330 100fa33ae452a123329551f24cfea219 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 2.8E-20 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 155 1.5E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 Gene3D G3DSA:1.10.10.10 100 169 6.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 Gene3D G3DSA:1.10.1740.10 4 78 1.9E-14 T 28-03-2018 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 SUPERFAMILY SSF88659 99 156 1.72E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 Pfam PF08281 Sigma-70, region 4 103 153 2.9E-17 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 Pfam PF04542 Sigma-70 region 2 10 75 2.3E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS03760 6cfcb00e64d8620df3eb7e8603afdc50 170 SUPERFAMILY SSF88946 6 89 1.53E-15 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 Gene3D G3DSA:1.25.40.20 1 118 1.8E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SUPERFAMILY SSF48403 9 201 8.77E-46 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 Pfam PF13637 Ankyrin repeats (many copies) 13 59 9.2E-8 T 28-03-2018 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 Pfam PF12796 Ankyrin repeats (3 copies) 112 200 4.3E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 71 100 14.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 38 67 0.0021 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 138 172 1.4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 5 34 280.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 176 201 1300.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 SMART SM00248 107 134 2600.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CO704_RS17835 b77d120a58e307b02a5b860c9fb6d83b 201 Gene3D G3DSA:1.25.40.20 119 201 1.5E-22 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 SUPERFAMILY SSF56784 3 222 6.09E-48 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 2.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 2.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 Gene3D G3DSA:3.40.50.1000 86 224 3.5E-32 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 195 4.0E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 83 194 9.5E-21 T 28-03-2018 IPR023214 HAD-like domain CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 1.6E-75 T 28-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.8E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CO704_RS20145 c053e3109633f8777d91c11f528a41a3 225 Gene3D G3DSA:1.10.150.240 15 85 1.6E-17 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 SUPERFAMILY SSF50129 1 96 1.53E-30 T 28-03-2018 IPR011032 GroES-like CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 4.8E-29 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 SMART SM00883 2 95 4.3E-48 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 Gene3D G3DSA:2.30.33.40 1 96 1.1E-31 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.855 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CO704_RS21395 717d1bdda0e9184a5b28bec7b9629b2e 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CO704_RS24505 7457b2b61ec5cbd7432afc13d903672e 339 Gene3D G3DSA:1.10.3720.10 3 325 6.6E-47 T 28-03-2018 CO704_RS24505 7457b2b61ec5cbd7432afc13d903672e 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.7E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24505 7457b2b61ec5cbd7432afc13d903672e 339 SUPERFAMILY SSF161098 89 160 2.62E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24505 7457b2b61ec5cbd7432afc13d903672e 339 SUPERFAMILY SSF161098 200 322 2.62E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07245 30874a043a9b1a9fc9dbcaacf61a3fbb 138 Pfam PF03928 Haem-degrading 4 130 2.8E-27 T 28-03-2018 IPR005624 Haem-degrading CO704_RS07245 30874a043a9b1a9fc9dbcaacf61a3fbb 138 SUPERFAMILY SSF143744 5 133 5.49E-31 T 28-03-2018 CO704_RS21545 27499da2023d2ef788418300c8b8e882 259 Pfam PF12395 Protein of unknown function 155 246 1.7E-6 T 28-03-2018 IPR022123 Protein of unknown function DUF3658 CO704_RS21545 27499da2023d2ef788418300c8b8e882 259 Pfam PF08874 Domain of unknown function (DUF1835) 6 119 3.0E-13 T 28-03-2018 IPR014973 Protein of unknown function DUF1835 CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 Gene3D G3DSA:1.10.8.60 175 241 1.2E-12 T 28-03-2018 CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 SUPERFAMILY SSF52540 26 219 3.66E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 14 239 1.2E-82 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 13 241 59.384 T 28-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 Pfam PF00308 Bacterial dnaA protein 24 220 1.9E-15 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 139 166 7.0E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 51 71 7.0E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CO704_RS05180 55eea6123094913d2b6d83b491a2212c 241 Gene3D G3DSA:3.40.50.300 22 172 2.3E-8 T 28-03-2018 CO704_RS03775 376b0f9269596d1bdd39d4f58056bd73 223 Pfam PF12710 haloacid dehalogenase-like hydrolase 14 192 3.3E-23 T 28-03-2018 CO704_RS03775 376b0f9269596d1bdd39d4f58056bd73 223 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 13 195 1.2E-33 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CO704_RS03775 376b0f9269596d1bdd39d4f58056bd73 223 Gene3D G3DSA:3.40.50.1000 12 200 5.3E-7 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03775 376b0f9269596d1bdd39d4f58056bd73 223 SUPERFAMILY SSF56784 14 195 2.76E-15 T 28-03-2018 IPR023214 HAD-like domain CO704_RS03775 376b0f9269596d1bdd39d4f58056bd73 223 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 12 194 1.5E-24 T 28-03-2018 CO704_RS17055 83c929c2b14eb209948e7dd1865f6742 258 SUPERFAMILY SSF53474 14 253 8.5E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17055 83c929c2b14eb209948e7dd1865f6742 258 Gene3D G3DSA:3.40.50.1820 1 254 5.6E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17055 83c929c2b14eb209948e7dd1865f6742 258 Pfam PF12697 Alpha/beta hydrolase family 19 246 4.6E-20 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS16950 3d59067eb58385453dabde8f02168156 225 Pfam PF08873 Domain of unknown function (DUF1834) 1 195 1.2E-44 T 28-03-2018 IPR014972 Bacteriophage Mu, Gp37 CO704_RS16950 3d59067eb58385453dabde8f02168156 225 Gene3D G3DSA:3.30.2000.10 1 151 2.9E-25 T 28-03-2018 CO704_RS10100 3d59067eb58385453dabde8f02168156 225 Pfam PF08873 Domain of unknown function (DUF1834) 1 195 1.2E-44 T 28-03-2018 IPR014972 Bacteriophage Mu, Gp37 CO704_RS10100 3d59067eb58385453dabde8f02168156 225 Gene3D G3DSA:3.30.2000.10 1 151 2.9E-25 T 28-03-2018 CO704_RS13335 d929317ea27a1ae28ca47f88e03ee068 572 Pfam PF08479 POTRA domain, ShlB-type 68 142 3.1E-15 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CO704_RS13335 d929317ea27a1ae28ca47f88e03ee068 572 Gene3D G3DSA:2.40.160.50 173 568 3.8E-30 T 28-03-2018 CO704_RS13335 d929317ea27a1ae28ca47f88e03ee068 572 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 368 529 3.0E-13 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CO704_RS13335 d929317ea27a1ae28ca47f88e03ee068 572 Gene3D G3DSA:3.10.20.310 70 142 1.7E-10 T 28-03-2018 CO704_RS12940 342d6bd2c18ee35977524c11447e7de0 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 346 1.4E-86 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CO704_RS12940 342d6bd2c18ee35977524c11447e7de0 371 SUPERFAMILY SSF51395 4 368 1.81E-114 T 28-03-2018 CO704_RS12940 342d6bd2c18ee35977524c11447e7de0 371 Gene3D G3DSA:3.20.20.70 7 371 1.4E-121 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS05450 c1a5de83dae7d7a1bc51f0ba67dc69c0 405 SUPERFAMILY SSF103473 12 399 6.41E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS05450 c1a5de83dae7d7a1bc51f0ba67dc69c0 405 Gene3D G3DSA:1.20.1250.20 216 404 4.5E-25 T 28-03-2018 CO704_RS05450 c1a5de83dae7d7a1bc51f0ba67dc69c0 405 Gene3D G3DSA:1.20.1250.20 17 210 1.0E-20 T 28-03-2018 CO704_RS05450 c1a5de83dae7d7a1bc51f0ba67dc69c0 405 Pfam PF07690 Major Facilitator Superfamily 30 362 1.2E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS14075 f5a9ebfd9c8928e746ce00273e786df3 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 41.911 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 CO704_RS14075 f5a9ebfd9c8928e746ce00273e786df3 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 1.3E-184 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 CO704_RS03320 7656aa4856b83eeb3bbdf974d7300d3c 398 Pfam PF07690 Major Facilitator Superfamily 21 345 7.1E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03320 7656aa4856b83eeb3bbdf974d7300d3c 398 Gene3D G3DSA:1.20.1250.20 202 398 3.6E-6 T 28-03-2018 CO704_RS03320 7656aa4856b83eeb3bbdf974d7300d3c 398 Gene3D G3DSA:1.20.1250.20 7 194 2.7E-14 T 28-03-2018 CO704_RS03320 7656aa4856b83eeb3bbdf974d7300d3c 398 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.094 T 28-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 CO704_RS03320 7656aa4856b83eeb3bbdf974d7300d3c 398 SUPERFAMILY SSF103473 14 396 1.57E-24 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09755 b41e8226692f3b22629988e26e106f25 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 1.0E-80 T 28-03-2018 IPR023234 NarG-like domain CO704_RS09755 b41e8226692f3b22629988e26e106f25 225 SUPERFAMILY SSF103501 1 224 3.79E-70 T 28-03-2018 IPR023234 NarG-like domain CO704_RS09755 b41e8226692f3b22629988e26e106f25 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.5E-121 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CO704_RS09755 b41e8226692f3b22629988e26e106f25 225 Gene3D G3DSA:1.20.950.20 1 216 1.1E-43 T 28-03-2018 CO704_RS02870 f929c0e0338ac8a2514b6cd3e268faf6 161 SUPERFAMILY SSF52728 3 161 8.24E-45 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS02870 f929c0e0338ac8a2514b6cd3e268faf6 161 Gene3D G3DSA:3.40.35.10 3 159 5.4E-47 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS02870 f929c0e0338ac8a2514b6cd3e268faf6 161 Pfam PF03830 PTS system sorbose subfamily IIB component 4 150 3.1E-43 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CO704_RS03450 44dfcfd46b9c02956c98015200c6ac93 75 Gene3D G3DSA:2.30.30.100 22 73 1.3E-29 T 28-03-2018 CO704_RS03450 44dfcfd46b9c02956c98015200c6ac93 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 2.1E-23 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CO704_RS03450 44dfcfd46b9c02956c98015200c6ac93 75 SUPERFAMILY SSF50182 22 73 1.04E-18 T 28-03-2018 IPR010920 LSM domain CO704_RS24555 77f6358cd97eab7993ba0e78404f4562 64 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 59 8.5E-26 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CO704_RS24555 77f6358cd97eab7993ba0e78404f4562 64 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 58 3.1E-27 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CO704_RS24555 77f6358cd97eab7993ba0e78404f4562 64 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 62 2.0E-13 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CO704_RS22220 a6974de5c0dd3e17046c210d95b5e689 165 PIRSF PIRSF030840 1 162 1.8E-77 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like CO704_RS22220 a6974de5c0dd3e17046c210d95b5e689 165 Pfam PF06228 Haem utilisation ChuX/HutX 22 156 2.0E-30 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like CO704_RS22220 a6974de5c0dd3e17046c210d95b5e689 165 Gene3D G3DSA:3.40.1570.10 3 165 2.6E-34 T 28-03-2018 CO704_RS22220 a6974de5c0dd3e17046c210d95b5e689 165 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 6 156 6.8E-61 T 28-03-2018 IPR010413 Heme utilization carrier protein HutX-like CO704_RS22220 a6974de5c0dd3e17046c210d95b5e689 165 SUPERFAMILY SSF144064 7 158 1.31E-44 T 28-03-2018 CO704_RS07190 169af340f33f4e2943f2b8d7178ded4c 202 SMART SM00014 61 169 3.6E-23 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS07190 169af340f33f4e2943f2b8d7178ded4c 202 Pfam PF01569 PAP2 superfamily 65 168 2.5E-13 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS07190 169af340f33f4e2943f2b8d7178ded4c 202 SUPERFAMILY SSF48317 1 200 6.54E-39 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS07190 169af340f33f4e2943f2b8d7178ded4c 202 Gene3D G3DSA:1.20.144.10 11 187 3.7E-24 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS09485 ad73f52ac35d6505b86c5cfa0ae414ab 478 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 25 447 7.3E-47 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CO704_RS09485 ad73f52ac35d6505b86c5cfa0ae414ab 478 PIRSF PIRSF002744 1 471 2.5E-98 T 28-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CO704_RS10480 a1db446210b2e1286341ac74baff41cf 119 Pfam PF04024 PspC domain 8 65 1.6E-13 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CO704_RS10480 a1db446210b2e1286341ac74baff41cf 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 8 119 1.5E-38 T 28-03-2018 IPR014320 Phage shock protein, PspC CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Gene3D G3DSA:3.90.1150.10 343 442 4.1E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 SUPERFAMILY SSF53383 17 440 1.26E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Gene3D G3DSA:3.40.640.10 531 774 1.0E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Gene3D G3DSA:3.90.1150.10 775 907 5.2E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.406 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Gene3D G3DSA:3.40.640.10 96 342 2.3E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 SUPERFAMILY SSF53383 929 951 7.72E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 SUPERFAMILY SSF53383 457 889 7.72E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 2.3E-186 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CO704_RS03020 244c73e5dd1fb069d1804f84f52b64ce 957 Pfam PF02347 Glycine cleavage system P-protein 477 740 1.4E-7 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CO704_RS12630 6b5d1df7f51de7f7939dfb0d3e6b64af 212 Gene3D G3DSA:1.10.3720.10 2 212 1.6E-33 T 28-03-2018 CO704_RS12630 6b5d1df7f51de7f7939dfb0d3e6b64af 212 SUPERFAMILY SSF161098 13 204 1.31E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12630 6b5d1df7f51de7f7939dfb0d3e6b64af 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 205 6.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11885 9b0b7844d64a9a25f32fac19e84c6e66 107 Pfam PF07027 Protein of unknown function (DUF1318) 18 107 7.8E-29 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CO704_RS11885 9b0b7844d64a9a25f32fac19e84c6e66 107 PIRSF PIRSF025560 2 107 3.2E-37 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.2E-174 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.5E-129 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 64.399 T 28-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 Gene3D G3DSA:3.40.50.2000 212 356 5.1E-39 T 28-03-2018 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 SUPERFAMILY SSF53756 2 371 1.82E-140 T 28-03-2018 CO704_RS23340 9d44d0007ae8801178dda4328cf63b75 376 Gene3D G3DSA:3.40.50.2000 1 211 6.2E-79 T 28-03-2018 CO704_RS13115 a9d04381e020b60d9e6ebdafaa3e9590 197 Pfam PF03848 Tellurite resistance protein TehB 3 193 2.9E-101 T 28-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CO704_RS13115 a9d04381e020b60d9e6ebdafaa3e9590 197 Gene3D G3DSA:3.40.50.150 1 197 2.4E-32 T 28-03-2018 CO704_RS13115 a9d04381e020b60d9e6ebdafaa3e9590 197 SUPERFAMILY SSF53335 12 196 9.05E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS13115 a9d04381e020b60d9e6ebdafaa3e9590 197 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 4 196 6.8E-100 T 28-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 5.2E-96 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 Gene3D G3DSA:1.10.1060.10 107 242 1.7E-26 T 28-03-2018 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 SUPERFAMILY SSF54292 3 106 3.71E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 7.8E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 SUPERFAMILY SSF46548 107 229 2.09E-31 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 7.5E-31 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS21325 8b3e424ccc506b633cd9ebe6b83800e9 244 Gene3D G3DSA:3.10.20.30 1 105 4.9E-29 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS17620 757ac61265504951bbcbfae95a3126d0 96 Gene3D G3DSA:2.20.25.10 2 96 1.2E-5 T 28-03-2018 CO704_RS02105 757ac61265504951bbcbfae95a3126d0 96 Gene3D G3DSA:2.20.25.10 2 96 1.2E-5 T 28-03-2018 CO704_RS24065 1e0c60e8fbfe57a810a507bdf34150c0 497 Pfam PF12592 Protein of unknown function (DUF3763) 443 497 3.2E-20 T 28-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 CO704_RS24065 1e0c60e8fbfe57a810a507bdf34150c0 497 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 7.3E-25 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CO704_RS24065 1e0c60e8fbfe57a810a507bdf34150c0 497 SMART SM00382 38 187 3.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS24065 1e0c60e8fbfe57a810a507bdf34150c0 497 Gene3D G3DSA:3.40.50.300 3 217 5.2E-18 T 28-03-2018 CO704_RS24065 1e0c60e8fbfe57a810a507bdf34150c0 497 SUPERFAMILY SSF52540 22 287 5.65E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 SUPERFAMILY SSF53244 287 416 6.96E-29 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 Gene3D G3DSA:3.90.190.20 289 421 1.1E-24 T 28-03-2018 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 Gene3D G3DSA:3.40.1190.10 2 286 1.4E-64 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 53 76 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 Pfam PF08245 Mur ligase middle domain 55 266 1.1E-12 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 145 160 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 415 2.1E-92 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 333 1.3E-5 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 PIRSF PIRSF001563 9 422 4.1E-96 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CO704_RS16275 e2b7b242e4c5b93753d0645957931b4a 423 SUPERFAMILY SSF53623 13 285 5.23E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 SUPERFAMILY SSF111369 18 173 9.68E-22 T 28-03-2018 CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 Gene3D G3DSA:3.90.1170.30 2 67 0.57 T 28-03-2018 CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 2 325 2.0E-69 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 Gene3D G3DSA:1.10.287.470 68 117 6.5E-6 T 28-03-2018 CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 221 9.9E-11 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS04250 a58c112767d900c8854201b95c1ebc15 331 Gene3D G3DSA:2.40.50.100 118 313 1.1E-8 T 28-03-2018 CO704_RS18705 5421f0a327ea777bcc4ea1d8a330118b 379 SUPERFAMILY SSF52266 287 376 3.0E-6 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CO704_RS18705 5421f0a327ea777bcc4ea1d8a330118b 379 Gene3D G3DSA:3.40.50.1110 72 379 3.1E-12 T 28-03-2018 CO704_RS18705 5421f0a327ea777bcc4ea1d8a330118b 379 Pfam PF04914 DltD protein 59 375 1.1E-21 T 28-03-2018 IPR006998 DltD CO704_RS14160 7df8b76deb9660512274ea64a710fd75 246 SUPERFAMILY SSF53335 9 224 1.49E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS14160 7df8b76deb9660512274ea64a710fd75 246 Pfam PF13649 Methyltransferase domain 50 141 1.7E-18 T 28-03-2018 CO704_RS14160 7df8b76deb9660512274ea64a710fd75 246 Gene3D G3DSA:3.40.50.150 33 244 2.7E-40 T 28-03-2018 CO704_RS07045 30d927a44f0df9f16c0fa384c8918444 175 Pfam PF04449 CS1 type fimbrial major subunit 34 165 1.4E-9 T 28-03-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 CO704_RS07630 62197d70d62b6d3e56222ad939089536 376 Gene3D G3DSA:3.40.50.2000 1 214 9.7E-68 T 28-03-2018 CO704_RS07630 62197d70d62b6d3e56222ad939089536 376 Gene3D G3DSA:3.40.50.2000 283 376 9.7E-24 T 28-03-2018 CO704_RS07630 62197d70d62b6d3e56222ad939089536 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 361 2.8E-93 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CO704_RS07630 62197d70d62b6d3e56222ad939089536 376 SUPERFAMILY SSF53756 3 373 3.27E-114 T 28-03-2018 CO704_RS07630 62197d70d62b6d3e56222ad939089536 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 3.0E-70 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Pfam PF08442 ATP-grasp domain 2 203 1.4E-82 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.6E-183 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Gene3D G3DSA:3.30.1490.20 21 95 8.0E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.342 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Gene3D G3DSA:3.30.470.20 96 239 5.2E-52 T 28-03-2018 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Gene3D G3DSA:3.40.50.261 240 385 4.1E-42 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 PIRSF PIRSF001554 1 388 1.7E-154 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 Pfam PF00549 CoA-ligase 262 382 1.1E-24 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 SUPERFAMILY SSF52210 239 385 7.06E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CO704_RS16665 3b50d27224e94e1a8eb78fd4a34a64ae 388 SUPERFAMILY SSF56059 1 238 3.54E-81 T 28-03-2018 CO704_RS10415 602cb7595a84621ec2651b2074a23838 289 Gene3D G3DSA:3.90.226.10 6 223 7.8E-29 T 28-03-2018 CO704_RS10415 602cb7595a84621ec2651b2074a23838 289 SUPERFAMILY SSF52096 28 265 8.46E-29 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS10415 602cb7595a84621ec2651b2074a23838 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 119 207 6.7E-14 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.7E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.7E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.1E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 SUPERFAMILY SSF46689 11 88 2.39E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 Gene3D G3DSA:1.10.10.60 1 58 7.1E-19 T 28-03-2018 CO704_RS12835 21235bc1f70a656adf32c1b8125e3155 210 Gene3D G3DSA:1.10.10.60 59 137 1.2E-8 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:3.10.20.310 175 265 3.8E-21 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:3.10.20.310 266 346 6.2E-14 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 PIRSF PIRSF006076 1 801 7.2E-258 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 801 4.3E-287 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 801 26.072 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:2.40.160.50 389 801 3.3E-87 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:3.10.20.310 92 174 2.1E-11 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:3.10.20.310 21 91 3.2E-8 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Gene3D G3DSA:3.10.20.310 350 388 0.035 T 28-03-2018 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Pfam PF01103 Surface antigen 448 801 2.6E-100 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Pfam PF07244 Surface antigen variable number repeat 92 172 2.9E-10 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Pfam PF07244 Surface antigen variable number repeat 347 421 3.9E-14 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Pfam PF07244 Surface antigen variable number repeat 176 263 5.5E-16 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CO704_RS19270 71452c0082319f6f61eb8a739f12fcb9 801 Pfam PF07244 Surface antigen variable number repeat 266 344 5.5E-13 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 Gene3D G3DSA:3.40.605.10 5 269 1.5E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 27 473 1.8E-204 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 SUPERFAMILY SSF53720 8 477 8.12E-167 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 Pfam PF00171 Aldehyde dehydrogenase family 18 475 9.1E-170 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS03250 e7026ecc7fa70b3ab04467ffe08b002d 481 Gene3D G3DSA:3.40.309.10 270 461 1.1E-71 T 28-03-2018 CO704_RS03065 2e196d068daa61937237450d71fd4c8d 197 SUPERFAMILY SSF109604 8 186 2.92E-44 T 28-03-2018 CO704_RS03065 2e196d068daa61937237450d71fd4c8d 197 Pfam PF13023 HD domain 18 180 5.9E-47 T 28-03-2018 IPR006674 HD domain CO704_RS03065 2e196d068daa61937237450d71fd4c8d 197 Gene3D G3DSA:1.10.3210.10 1 197 8.4E-47 T 28-03-2018 CO704_RS23495 2fe4de316ca0bd69a865e51445732670 118 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 118 8.0E-42 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 CO704_RS23495 2fe4de316ca0bd69a865e51445732670 118 Pfam PF07226 Protein of unknown function (DUF1422) 3 113 5.4E-50 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 CO704_RS22685 31cc0283faaeced554898c82fedeefeb 439 Pfam PF02264 LamB porin 27 439 4.1E-140 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS22685 31cc0283faaeced554898c82fedeefeb 439 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 435 2.0E-151 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS22685 31cc0283faaeced554898c82fedeefeb 439 SUPERFAMILY SSF56935 25 439 1.04E-132 T 28-03-2018 CO704_RS22685 31cc0283faaeced554898c82fedeefeb 439 Gene3D G3DSA:2.40.170.10 25 439 9.8E-148 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 1.4E-169 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 239.059 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 SUPERFAMILY SSF53383 78 381 4.87E-43 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 Gene3D G3DSA:3.40.640.10 101 346 1.1E-30 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 Pfam PF12390 Selenocysteine synthase N terminal 8 47 1.3E-7 T 28-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS00200 9121e81a5c9100e6654ef697594a1879 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 453 4.1E-179 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CO704_RS21805 87e9fde08a9edcceeecaf428215e3daa 173 SUPERFAMILY SSF55729 2 169 4.72E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS21805 87e9fde08a9edcceeecaf428215e3daa 173 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.0E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS21805 87e9fde08a9edcceeecaf428215e3daa 173 Gene3D G3DSA:3.40.630.30 1 172 1.4E-23 T 28-03-2018 CO704_RS24715 d56041647d775cf9883f880841673500 132 Gene3D G3DSA:1.10.10.690 1 131 1.1E-40 T 28-03-2018 CO704_RS24715 d56041647d775cf9883f880841673500 132 Pfam PF06078 Bacterial protein of unknown function (DUF937) 5 107 6.4E-12 T 28-03-2018 IPR009282 Protein of unknown function DUF937 CO704_RS24715 d56041647d775cf9883f880841673500 132 SUPERFAMILY SSF140804 3 130 4.97E-34 T 28-03-2018 IPR027405 YidB-like CO704_RS16775 332900d70157a1c08496008ca017783d 85 Gene3D G3DSA:3.40.50.220 3 80 7.6E-22 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CO704_RS16775 332900d70157a1c08496008ca017783d 85 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 68 3.1E-10 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CO704_RS16775 332900d70157a1c08496008ca017783d 85 SUPERFAMILY SSF52172 1 70 6.46E-21 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS13295 241a7d35ebb9f307196b70520795209d 390 SUPERFAMILY SSF53383 1 386 9.44E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13295 241a7d35ebb9f307196b70520795209d 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 385 1.8E-116 T 28-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CO704_RS13295 241a7d35ebb9f307196b70520795209d 390 Gene3D G3DSA:3.90.1150.10 272 384 1.5E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS13295 241a7d35ebb9f307196b70520795209d 390 Pfam PF00155 Aminotransferase class I and II 30 382 1.6E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS13295 241a7d35ebb9f307196b70520795209d 390 Gene3D G3DSA:3.40.640.10 42 271 3.9E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS13415 b5022b5610bedcc65725bc297e4425e2 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 95 5.6E-18 T 28-03-2018 IPR018660 C-type lysozyme inhibitor CO704_RS13415 b5022b5610bedcc65725bc297e4425e2 107 SUPERFAMILY SSF141488 27 104 5.89E-24 T 28-03-2018 IPR018660 C-type lysozyme inhibitor CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 Pfam PF02300 Fumarate reductase subunit C 3 128 6.8E-55 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 114 5.0E-48 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.23 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 PIRSF PIRSF000180 2 130 8.2E-59 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 Gene3D G3DSA:1.20.1300.10 3 128 6.7E-56 T 28-03-2018 CO704_RS21330 ed97df41488acce7312237a73e5b9647 131 SUPERFAMILY SSF81343 2 131 2.4E-57 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CO704_RS00480 d900427ef48bb9a7d5ffb995a81de88d 123 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 4.4E-32 T 28-03-2018 IPR019635 Protein of unknown function DUF2500 CO704_RS09350 dcf2868b14c88155418c8d9c261bdfce 291 SMART SM00530 23 95 6.3E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS09350 dcf2868b14c88155418c8d9c261bdfce 291 SUPERFAMILY SSF47413 43 94 4.69E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS09350 dcf2868b14c88155418c8d9c261bdfce 291 Pfam PF13560 Helix-turn-helix domain 20 98 1.3E-14 T 28-03-2018 CO704_RS09350 dcf2868b14c88155418c8d9c261bdfce 291 Gene3D G3DSA:1.10.260.40 13 100 4.2E-13 T 28-03-2018 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 1.4E-114 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.032 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 2.4E-138 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 Gene3D G3DSA:1.10.1200.80 252 321 1.1E-20 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 PIRSF PIRSF006621 1 321 5.6E-99 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 SUPERFAMILY SSF51395 10 319 1.03E-87 T 28-03-2018 CO704_RS01370 2a4315c5052fe1b21f0d0431106b95ec 321 Gene3D G3DSA:3.20.20.70 6 246 2.3E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.2E-41 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 Gene3D G3DSA:3.30.360.10 130 238 1.5E-34 T 28-03-2018 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.054 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 SUPERFAMILY SSF51735 4 130 1.34E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 SUPERFAMILY SSF51735 240 272 1.34E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 3.2E-42 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 SUPERFAMILY SSF55347 131 240 3.71E-37 T 28-03-2018 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 Gene3D G3DSA:3.40.50.720 1 123 2.3E-29 T 28-03-2018 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 PIRSF PIRSF000161 4 272 2.9E-92 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS19845 596ab6ac09ce583f3e68de667021962b 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.6E-110 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CO704_RS13605 43ef56073837dc989355375ebe527838 310 Pfam PF07859 alpha/beta hydrolase fold 79 280 1.4E-48 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CO704_RS13605 43ef56073837dc989355375ebe527838 310 SUPERFAMILY SSF53474 27 305 9.96E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS13605 43ef56073837dc989355375ebe527838 310 Gene3D G3DSA:3.40.50.1820 3 308 2.1E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS06750 1700f94559fb02f4b43c55b8da942cf8 348 SUPERFAMILY SSF143631 32 343 4.45E-95 T 28-03-2018 IPR003374 ApbE-like domain CO704_RS06750 1700f94559fb02f4b43c55b8da942cf8 348 Gene3D G3DSA:3.10.520.10 20 333 8.9E-52 T 28-03-2018 CO704_RS06750 1700f94559fb02f4b43c55b8da942cf8 348 Pfam PF02424 ApbE family 39 322 7.7E-81 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CO704_RS06750 1700f94559fb02f4b43c55b8da942cf8 348 PIRSF PIRSF006268 4 345 2.2E-90 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CO704_RS10235 3620b0df28782fba6b3f409c6c1fa77c 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 21.488 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 CO704_RS10235 3620b0df28782fba6b3f409c6c1fa77c 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 6.8E-93 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 CO704_RS23855 3728c7e664ef037a8e44f7db18c14dc1 205 Pfam PF03458 UPF0126 domain 5 79 3.4E-19 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CO704_RS23855 3728c7e664ef037a8e44f7db18c14dc1 205 Pfam PF03458 UPF0126 domain 91 164 3.0E-21 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CO704_RS05740 51776f37f5e50e4cb10d3f3bcfcc21c8 347 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 3.3E-93 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.024 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 342 4.4E-39 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 164 3.2E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 Gene3D G3DSA:3.30.1330.10 31 161 8.5E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 SUPERFAMILY SSF55326 7 170 2.54E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 SUPERFAMILY SSF56042 171 342 4.34E-64 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 6.1E-153 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CO704_RS05165 c0c55df25a7fd0bba19802763aafcaf8 345 Gene3D G3DSA:3.90.650.10 171 345 8.0E-63 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CO704_RS24610 34e6c030e4970d56ece2234a3ae1dd4a 310 Gene3D G3DSA:3.40.1190.20 2 310 2.8E-57 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24610 34e6c030e4970d56ece2234a3ae1dd4a 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 259 272 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS24610 34e6c030e4970d56ece2234a3ae1dd4a 310 SUPERFAMILY SSF53613 2 305 1.03E-71 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24610 34e6c030e4970d56ece2234a3ae1dd4a 310 Pfam PF00294 pfkB family carbohydrate kinase 4 306 1.1E-67 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS25700 4cd1aae1781f300bb26cc1f2e444094d 194 Gene3D G3DSA:1.10.10.10 4 99 2.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25700 4cd1aae1781f300bb26cc1f2e444094d 194 SUPERFAMILY SSF46785 10 91 2.44E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24390 bb30c07d0087871d7abed60faf3242ce 95 SMART SM00530 36 90 3.0E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS24390 bb30c07d0087871d7abed60faf3242ce 95 Gene3D G3DSA:1.10.260.40 18 85 1.7E-8 T 28-03-2018 CO704_RS24390 bb30c07d0087871d7abed60faf3242ce 95 SUPERFAMILY SSF47413 39 86 2.31E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS24390 bb30c07d0087871d7abed60faf3242ce 95 Pfam PF01381 Helix-turn-helix 38 79 1.3E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS21310 19d6200dedf44f46be3b39c2ec31fef4 176 Pfam PF00583 Acetyltransferase (GNAT) family 20 125 2.2E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS21310 19d6200dedf44f46be3b39c2ec31fef4 176 Gene3D G3DSA:3.40.630.30 1 153 8.2E-18 T 28-03-2018 CO704_RS21310 19d6200dedf44f46be3b39c2ec31fef4 176 SUPERFAMILY SSF55729 15 133 1.12E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS09030 e7ec5c7eaf70d4417f8d47282f283bb4 877 Pfam PF02470 MlaD protein 46 137 1.2E-16 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS09030 e7ec5c7eaf70d4417f8d47282f283bb4 877 Pfam PF02470 MlaD protein 163 220 6.4E-7 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS09030 e7ec5c7eaf70d4417f8d47282f283bb4 877 Pfam PF02470 MlaD protein 635 724 1.4E-8 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS09030 e7ec5c7eaf70d4417f8d47282f283bb4 877 Pfam PF02470 MlaD protein 281 348 5.9E-6 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS09030 e7ec5c7eaf70d4417f8d47282f283bb4 877 Pfam PF02470 MlaD protein 747 809 1.2E-9 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS12930 a2fb331f4142418af8d4ba2ac6bd4030 271 Pfam PF03180 NLPA lipoprotein 27 269 1.6E-76 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS12930 a2fb331f4142418af8d4ba2ac6bd4030 271 Gene3D G3DSA:3.40.190.10 25 122 3.1E-26 T 28-03-2018 CO704_RS12930 a2fb331f4142418af8d4ba2ac6bd4030 271 Gene3D G3DSA:3.40.190.10 123 270 5.2E-41 T 28-03-2018 CO704_RS12930 a2fb331f4142418af8d4ba2ac6bd4030 271 SUPERFAMILY SSF53850 25 269 2.27E-70 T 28-03-2018 CO704_RS12930 a2fb331f4142418af8d4ba2ac6bd4030 271 PIRSF PIRSF002854 2 271 6.5E-89 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 416 2.0E-87 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 Gene3D G3DSA:1.20.5.50 127 212 0.0026 T 28-03-2018 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 Gene3D G3DSA:1.20.1330.10 390 608 2.8E-18 T 28-03-2018 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 Pfam PF00460 Flagella basal body rod protein 4 33 1.8E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 SUPERFAMILY SSF64518 130 327 9.02E-13 T 28-03-2018 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 2.1E-11 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 2.1E-11 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.1E-11 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 2.1E-11 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 2.1E-11 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 SUPERFAMILY SSF64518 391 649 3.01E-35 T 28-03-2018 CO704_RS17440 02b6b6a69834dbef981326a9d440ec71 650 Pfam PF00669 Bacterial flagellin N-terminal helical region 391 486 2.5E-9 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS21770 e880060d80f7ed8669e70b9ce10fa0a1 459 Gene3D G3DSA:1.20.1600.10 21 454 3.4E-78 T 28-03-2018 CO704_RS21770 e880060d80f7ed8669e70b9ce10fa0a1 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 451 4.8E-69 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CO704_RS21770 e880060d80f7ed8669e70b9ce10fa0a1 459 SUPERFAMILY SSF56954 6 452 3.53E-84 T 28-03-2018 CO704_RS21770 e880060d80f7ed8669e70b9ce10fa0a1 459 Pfam PF02321 Outer membrane efflux protein 275 443 6.7E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS21770 e880060d80f7ed8669e70b9ce10fa0a1 459 Pfam PF02321 Outer membrane efflux protein 59 243 9.6E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS02430 f71ed5d6099835f71b3f27739c6d9fc3 386 SUPERFAMILY SSF56059 1 168 5.74E-95 T 28-03-2018 CO704_RS02430 f71ed5d6099835f71b3f27739c6d9fc3 386 SUPERFAMILY SSF56059 266 383 5.74E-95 T 28-03-2018 CO704_RS02430 f71ed5d6099835f71b3f27739c6d9fc3 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 5.9E-162 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CO704_RS02430 f71ed5d6099835f71b3f27739c6d9fc3 386 SUPERFAMILY SSF52440 174 279 1.21E-38 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CO704_RS05490 e4b5cbc492959dd28097c39895249b7b 383 Gene3D G3DSA:3.40.50.150 105 372 2.7E-62 T 28-03-2018 CO704_RS05490 e4b5cbc492959dd28097c39895249b7b 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 5.6E-101 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS05490 e4b5cbc492959dd28097c39895249b7b 383 PIRSF PIRSF003085 3 378 1.5E-123 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CO704_RS05490 e4b5cbc492959dd28097c39895249b7b 383 SUPERFAMILY SSF53335 117 370 1.77E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS14615 cb459e0bef86330b3fba35e8bc268051 322 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 195 2.3E-62 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CO704_RS14615 cb459e0bef86330b3fba35e8bc268051 322 Gene3D G3DSA:1.20.1330.10 38 295 1.0E-25 T 28-03-2018 CO704_RS14615 cb459e0bef86330b3fba35e8bc268051 322 Pfam PF00700 Bacterial flagellin C-terminal helical region 240 318 3.8E-6 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS14615 cb459e0bef86330b3fba35e8bc268051 322 SUPERFAMILY SSF64518 1 319 3.53E-60 T 28-03-2018 CO704_RS14615 cb459e0bef86330b3fba35e8bc268051 322 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 142 6.7E-28 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS14660 40714c1a04908d6ed0dbd63db48f7e6d 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS14660 40714c1a04908d6ed0dbd63db48f7e6d 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 132 1.0E-11 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CO704_RS14660 40714c1a04908d6ed0dbd63db48f7e6d 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.5E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CO704_RS14660 40714c1a04908d6ed0dbd63db48f7e6d 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.3E-50 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 Gene3D G3DSA:3.80.30.20 137 379 1.3E-48 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.102 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 438 1.2E-109 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 Gene3D G3DSA:2.40.50.140 380 441 2.5E-22 T 28-03-2018 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 Pfam PF04055 Radical SAM superfamily 146 323 5.6E-31 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 SMART SM00729 140 365 7.2E-54 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 SUPERFAMILY SSF102114 110 371 1.57E-53 T 28-03-2018 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.1E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CO704_RS07160 d16c00acc19e45a41ccecf6431e2eb3b 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 2.2E-198 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CO704_RS02215 c153fc0630e93dfe6b43fa41b8d5b10c 265 Gene3D G3DSA:1.10.3100.10 1 106 7.0E-16 T 28-03-2018 IPR027910 YdiL-like domain CO704_RS02215 c153fc0630e93dfe6b43fa41b8d5b10c 265 SMART SM00530 5 60 6.1E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS02215 c153fc0630e93dfe6b43fa41b8d5b10c 265 Pfam PF01381 Helix-turn-helix 6 58 2.8E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS02215 c153fc0630e93dfe6b43fa41b8d5b10c 265 SUPERFAMILY SSF47413 3 70 2.82E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS06400 52443d4972b3f88e08879a432b4f88cc 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 5.2E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS06400 52443d4972b3f88e08879a432b4f88cc 237 SUPERFAMILY SSF161098 17 220 1.1E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06400 52443d4972b3f88e08879a432b4f88cc 237 Gene3D G3DSA:1.10.3720.10 6 231 1.4E-31 T 28-03-2018 CO704_RS06400 52443d4972b3f88e08879a432b4f88cc 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 220 3.8E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13380 3389284b859570ba8d978af9bedcd00d 228 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 1.5E-83 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CO704_RS13380 3389284b859570ba8d978af9bedcd00d 228 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 3.5E-62 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CO704_RS13380 3389284b859570ba8d978af9bedcd00d 228 PIRSF PIRSF006102 1 219 1.5E-77 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CO704_RS13380 3389284b859570ba8d978af9bedcd00d 228 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.576 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 28-03-2018 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS20320 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS11480 4a3496657d6623ea334bcd30cc8da342 168 Pfam PF02082 Transcriptional regulator 4 85 3.8E-23 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS11480 4a3496657d6623ea334bcd30cc8da342 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 1.7E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS11480 4a3496657d6623ea334bcd30cc8da342 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CO704_RS11480 4a3496657d6623ea334bcd30cc8da342 168 Gene3D G3DSA:1.10.10.10 1 155 4.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11480 4a3496657d6623ea334bcd30cc8da342 168 SUPERFAMILY SSF46785 5 146 3.9E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20190 37369400493739061ba3129a9df49470 263 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 88 263 1.5E-60 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 94 109 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 216 232 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 126 140 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 57 74 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 17 33 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 198 213 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 174 190 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 PRINTS PR01714 Ferric iron reductase signature 242 260 3.2E-54 T 28-03-2018 IPR008090 Ferric iron reductase CO704_RS20190 37369400493739061ba3129a9df49470 263 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 242 262 7.0E-7 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 CO704_RS20190 37369400493739061ba3129a9df49470 263 Pfam PF06276 Ferric iron reductase FhuF-like transporter 94 238 6.9E-27 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82714 721 790 1.44E-9 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Pfam PF00873 AcrB/AcrD/AcrF family 3 1012 9.9E-165 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82693 558 645 1.55E-5 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82693 40 135 1.78E-21 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:3.30.2090.10 716 791 7.5E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:3.30.70.1430 40 144 6.1E-31 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:3.30.2090.10 181 269 1.5E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82866 292 490 2.88E-37 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.8E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:1.20.1640.10 819 1014 2.9E-39 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82714 184 266 1.15E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82693 136 182 5.23E-18 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82693 270 325 5.23E-18 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:3.30.70.1430 559 693 4.2E-12 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 SUPERFAMILY SSF82866 794 1015 3.79E-44 T 28-03-2018 CO704_RS04245 47509e48e2a9a7000070d49214523c5a 1020 Gene3D G3DSA:1.20.1640.10 284 505 4.4E-36 T 28-03-2018 CO704_RS17485 c0ffdc209aec63ec76e09925a7a36fec 116 PIRSF PIRSF002889 1 58 1.9E-16 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CO704_RS17485 c0ffdc209aec63ec76e09925a7a36fec 116 PIRSF PIRSF002889 51 116 6.8E-16 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CO704_RS17485 c0ffdc209aec63ec76e09925a7a36fec 116 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.1E-53 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.349 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 SUPERFAMILY SSF47729 1 91 1.22E-29 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 Gene3D G3DSA:4.10.520.10 1 94 6.6E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 SMART SM00411 1 91 7.2E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS15580 d0cebe2c5153d3a4cecd4ac6580e607d 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 8.2E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CO704_RS00465 4b16f3438a6d41ca5ddcf089fe1e4890 356 Pfam PF01380 SIS domain 32 156 1.7E-12 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS00465 4b16f3438a6d41ca5ddcf089fe1e4890 356 Gene3D G3DSA:3.40.50.10490 203 336 6.3E-14 T 28-03-2018 CO704_RS00465 4b16f3438a6d41ca5ddcf089fe1e4890 356 SUPERFAMILY SSF53697 5 342 5.64E-49 T 28-03-2018 CO704_RS00465 4b16f3438a6d41ca5ddcf089fe1e4890 356 Gene3D G3DSA:3.40.50.10490 2 202 4.5E-27 T 28-03-2018 CO704_RS25945 92734b0816c8543877fc580f51414fa7 337 Gene3D G3DSA:1.10.10.10 191 334 3.3E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25945 92734b0816c8543877fc580f51414fa7 337 Gene3D G3DSA:1.10.10.10 68 190 0.0015 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25945 92734b0816c8543877fc580f51414fa7 337 Pfam PF01051 Initiator Replication protein 27 280 1.1E-29 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Gene3D G3DSA:3.30.450.20 12 131 2.6E-7 T 28-03-2018 CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 484 2.7E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Pfam PF08448 PAS fold 155 262 8.3E-6 T 28-03-2018 IPR013656 PAS fold-4 CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SMART SM00387 392 485 0.008 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Pfam PF13188 PAS domain 17 64 0.0013 T 28-03-2018 IPR000014 PAS domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SUPERFAMILY SSF55785 14 132 3.14E-5 T 28-03-2018 IPR000014 PAS domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SUPERFAMILY SSF55874 351 485 8.25E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Pfam PF07730 Histidine kinase 292 355 5.4E-13 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Gene3D G3DSA:3.30.565.10 341 491 1.4E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 Gene3D G3DSA:3.30.450.20 144 316 2.5E-14 T 28-03-2018 CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SUPERFAMILY SSF55785 142 231 1.01E-7 T 28-03-2018 IPR000014 PAS domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SMART SM00091 16 79 0.74 T 28-03-2018 IPR000014 PAS domain CO704_RS16070 8d7b167acdc43b8ac59671df2d40f22b 495 SMART SM00091 149 215 0.028 T 28-03-2018 IPR000014 PAS domain CO704_RS11585 b418558764bc8ebae712a2d1ef0b4af1 263 Pfam PF08787 Alginate lyase 84 260 7.4E-28 T 28-03-2018 IPR014895 Alginate lyase 2 CO704_RS11585 b418558764bc8ebae712a2d1ef0b4af1 263 SUPERFAMILY SSF49899 60 260 1.82E-25 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CO704_RS11585 b418558764bc8ebae712a2d1ef0b4af1 263 Gene3D G3DSA:2.60.120.200 39 263 2.2E-45 T 28-03-2018 CO704_RS14925 09a83431f12840383b75ec908e1b6774 253 Pfam PF04794 YdjC-like protein 5 241 1.1E-58 T 28-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like CO704_RS14925 09a83431f12840383b75ec908e1b6774 253 Gene3D G3DSA:3.20.20.370 1 253 3.3E-81 T 28-03-2018 CO704_RS14925 09a83431f12840383b75ec908e1b6774 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 38.724 T 28-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 CO704_RS14925 09a83431f12840383b75ec908e1b6774 253 SUPERFAMILY SSF88713 1 253 6.89E-75 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS09400 73a3c1c68af51804a0f2bedb308c8b30 365 Gene3D G3DSA:3.40.50.300 1 244 3.1E-68 T 28-03-2018 CO704_RS09400 73a3c1c68af51804a0f2bedb308c8b30 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS09400 73a3c1c68af51804a0f2bedb308c8b30 365 Pfam PF00005 ABC transporter 19 163 3.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS09400 73a3c1c68af51804a0f2bedb308c8b30 365 SMART SM00382 27 212 4.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09400 73a3c1c68af51804a0f2bedb308c8b30 365 SUPERFAMILY SSF52540 1 239 3.36E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05015 3ef24f909abe3b9b964551148c5a7122 436 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 396 6.5E-24 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 Gene3D G3DSA:3.40.190.10 177 265 1.4E-15 T 28-03-2018 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 SUPERFAMILY SSF53850 95 294 6.79E-32 T 28-03-2018 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 Pfam PF03466 LysR substrate binding domain 95 293 1.5E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 Gene3D G3DSA:3.40.190.10 85 176 4.1E-15 T 28-03-2018 CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 Gene3D G3DSA:1.10.10.10 4 84 1.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 SUPERFAMILY SSF46785 6 115 1.19E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03180 038d635ba4221df3567b0e58e7a614d0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS16755 55a81d05a1d34a1b5be7c5b3ddda4afd 191 Pfam PF02669 K+-transporting ATPase, c chain 5 186 1.6E-69 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CO704_RS16755 55a81d05a1d34a1b5be7c5b3ddda4afd 191 PIRSF PIRSF001296 1 191 1.7E-74 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CO704_RS16755 55a81d05a1d34a1b5be7c5b3ddda4afd 191 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 188 1.5E-82 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CO704_RS16755 55a81d05a1d34a1b5be7c5b3ddda4afd 191 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.785 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CO704_RS13690 cdb6ad10ae6d4209680238981416ce76 372 Pfam PF01594 AI-2E family transporter 15 344 1.3E-53 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CO704_RS17925 4864a72990aab51be7e70945af1f8bc7 127 Pfam PF13560 Helix-turn-helix domain 18 54 8.7E-7 T 28-03-2018 CO704_RS17925 4864a72990aab51be7e70945af1f8bc7 127 SMART SM00530 19 72 0.0064 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS17925 4864a72990aab51be7e70945af1f8bc7 127 Gene3D G3DSA:1.10.260.40 7 127 6.8E-12 T 28-03-2018 CO704_RS17925 4864a72990aab51be7e70945af1f8bc7 127 SUPERFAMILY SSF47413 10 66 4.83E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS11515 fc8149b9097169b1e05f1f56cdaa2f86 444 Pfam PF01546 Peptidase family M20/M25/M40 77 438 1.7E-18 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS11515 fc8149b9097169b1e05f1f56cdaa2f86 444 Gene3D G3DSA:3.40.630.10 1 444 3.1E-29 T 28-03-2018 CO704_RS11515 fc8149b9097169b1e05f1f56cdaa2f86 444 Pfam PF07687 Peptidase dimerisation domain 211 346 5.0E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS11515 fc8149b9097169b1e05f1f56cdaa2f86 444 SUPERFAMILY SSF53187 4 193 7.23E-32 T 28-03-2018 CO704_RS11515 fc8149b9097169b1e05f1f56cdaa2f86 444 SUPERFAMILY SSF53187 362 441 7.23E-32 T 28-03-2018 CO704_RS05915 ce593804ef08d9055187470c6cfca673 118 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 118 4.0E-21 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CO704_RS05915 ce593804ef08d9055187470c6cfca673 118 Gene3D G3DSA:1.10.10.10 20 68 8.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05915 ce593804ef08d9055187470c6cfca673 118 SUPERFAMILY SSF46955 3 50 2.01E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS05915 ce593804ef08d9055187470c6cfca673 118 Gene3D G3DSA:1.10.10.60 2 19 0.0018 T 28-03-2018 CO704_RS05915 ce593804ef08d9055187470c6cfca673 118 Pfam PF07037 Putative transcription regulator (DUF1323) 6 116 1.7E-35 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 138 1.6E-42 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 SUPERFAMILY SSF52788 1 142 7.33E-42 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 Gene3D G3DSA:3.40.50.2300 3 147 2.0E-40 T 28-03-2018 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 SMART SM00226 3 141 4.2E-60 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 5.1E-28 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 5.1E-28 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 5.1E-28 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 5.1E-28 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CO704_RS07440 6ed9a454f79132b9f803254c0188aa09 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 5.1E-28 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CO704_RS22445 08c8187d6eb61071adb78fda4062bda2 227 Gene3D G3DSA:2.60.120.10 57 218 2.1E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22445 08c8187d6eb61071adb78fda4062bda2 227 Pfam PF07385 D-lyxose isomerase 1 224 1.3E-97 T 28-03-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 CO704_RS06990 2fa29274f26857d3ce96429036ba5458 278 SUPERFAMILY SSF53474 1 276 3.08E-92 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS06990 2fa29274f26857d3ce96429036ba5458 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 1.0E-119 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CO704_RS06990 2fa29274f26857d3ce96429036ba5458 278 Pfam PF00756 Putative esterase 21 271 4.7E-69 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CO704_RS06990 2fa29274f26857d3ce96429036ba5458 278 Gene3D G3DSA:3.40.50.1820 1 277 2.3E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 Gene3D G3DSA:1.10.287.70 573 640 1.8E-17 T 28-03-2018 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 SUPERFAMILY SSF81442 43 560 2.09E-181 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 Gene3D G3DSA:1.20.210.10 43 561 9.4E-188 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.3E-95 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS18230 6f99dbcfee6eb62674fcc33324851190 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 3.5E-135 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 SUPERFAMILY SSF55811 63 186 7.31E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 Gene3D G3DSA:3.90.79.10 63 192 8.8E-26 T 28-03-2018 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 PRINTS PR00502 NUDIX hydrolase family signature 95 109 6.2E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 PRINTS PR00502 NUDIX hydrolase family signature 109 124 6.2E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 Pfam PF00293 NUDIX domain 73 180 2.1E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS06145 2481ef9250ce3050de024ae254131eb8 207 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 12 63 3.5E-18 T 28-03-2018 CO704_RS17830 1486ef21fd131c4779e00b9818c400d8 461 SUPERFAMILY SSF51338 83 126 6.62E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS17830 1486ef21fd131c4779e00b9818c400d8 461 Gene3D G3DSA:3.20.20.140 126 408 7.8E-25 T 28-03-2018 CO704_RS17830 1486ef21fd131c4779e00b9818c400d8 461 Pfam PF07969 Amidohydrolase family 175 407 2.6E-10 T 28-03-2018 IPR013108 Amidohydrolase 3 CO704_RS17830 1486ef21fd131c4779e00b9818c400d8 461 Gene3D G3DSA:2.30.40.10 51 125 2.7E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS17830 1486ef21fd131c4779e00b9818c400d8 461 SUPERFAMILY SSF51556 119 413 7.66E-70 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 Gene3D G3DSA:1.10.287.310 1 63 1.1E-22 T 28-03-2018 CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.719 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 Pfam PF00831 Ribosomal L29 protein 4 60 4.8E-23 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.9E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01135 7380920c745ae3fbf86a4ae0b0f98482 63 SUPERFAMILY SSF46561 1 61 7.46E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS19200 e697f53430adfccce47673e3414971ba 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 8.0E-19 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CO704_RS19200 e697f53430adfccce47673e3414971ba 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.143 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CO704_RS19200 e697f53430adfccce47673e3414971ba 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 2.6E-34 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PIRSF PIRSF002764 1 219 6.6E-83 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.1E-71 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 7.6E-94 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CO704_RS06190 20f2e9e44dbc69ce37bae8e8b9db2888 219 Pfam PF03379 CcmB protein 4 216 1.2E-89 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 5.4E-59 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 SUPERFAMILY SSF55174 1 85 4.71E-12 T 28-03-2018 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 Pfam PF00849 RNA pseudouridylate synthase 62 192 6.8E-19 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 Gene3D G3DSA:3.10.290.10 1 62 2.2E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 Pfam PF01479 S4 domain 1 47 7.3E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 SMART SM00363 1 60 4.1E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 Gene3D G3DSA:3.30.2350.10 63 230 1.0E-37 T 28-03-2018 CO704_RS06810 eaefa2d601a30cabca751406f197fbea 233 SUPERFAMILY SSF55120 61 227 8.64E-48 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS00065 c53423a0d8ea57c3484e6f4d7292fd51 256 Gene3D G3DSA:3.10.129.10 2 253 2.3E-8 T 28-03-2018 CO704_RS00065 c53423a0d8ea57c3484e6f4d7292fd51 256 Pfam PF01575 MaoC like domain 14 96 1.8E-9 T 28-03-2018 IPR002539 MaoC-like domain CO704_RS00065 c53423a0d8ea57c3484e6f4d7292fd51 256 SUPERFAMILY SSF54637 10 91 2.16E-11 T 28-03-2018 IPR029069 HotDog domain CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 295 5.1E-100 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 SUPERFAMILY SSF54675 15 129 1.77E-31 T 28-03-2018 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 SUPERFAMILY SSF51690 130 295 6.28E-58 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 Gene3D G3DSA:3.20.20.70 156 285 7.7E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 Gene3D G3DSA:3.90.1170.20 11 155 6.1E-43 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 4.9E-59 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 PIRSF PIRSF006250 17 296 5.8E-109 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CO704_RS19550 7385512e3d36c25868ad4080d3112bd4 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 128 3.5E-25 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CO704_RS23260 7988cbda6fcd542fcdc6e663d280a68b 394 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 36 364 5.0E-134 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CO704_RS23260 7988cbda6fcd542fcdc6e663d280a68b 394 Gene3D G3DSA:3.90.20.10 33 140 4.4E-4 T 28-03-2018 CO704_RS23725 89e2261340d5fe15f4bb7231abc02f24 420 Gene3D G3DSA:2.70.70.10 278 420 6.7E-34 T 28-03-2018 CO704_RS23725 89e2261340d5fe15f4bb7231abc02f24 420 SUPERFAMILY SSF51261 223 418 5.23E-48 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS23725 89e2261340d5fe15f4bb7231abc02f24 420 Gene3D G3DSA:1.20.120.330 31 132 3.5E-4 T 28-03-2018 CO704_RS23725 89e2261340d5fe15f4bb7231abc02f24 420 Pfam PF01551 Peptidase family M23 321 414 3.0E-27 T 28-03-2018 IPR016047 Peptidase M23 CO704_RS23725 89e2261340d5fe15f4bb7231abc02f24 420 Gene3D G3DSA:1.20.5.320 160 276 0.03 T 28-03-2018 CO704_RS20575 84acc8de077d8e544e4c1d0e91a5d2b4 240 SUPERFAMILY SSF52540 3 230 6.05E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS20575 84acc8de077d8e544e4c1d0e91a5d2b4 240 Gene3D G3DSA:3.40.50.300 1 236 6.3E-66 T 28-03-2018 CO704_RS20575 84acc8de077d8e544e4c1d0e91a5d2b4 240 SMART SM00382 32 220 9.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS20575 84acc8de077d8e544e4c1d0e91a5d2b4 240 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS20575 84acc8de077d8e544e4c1d0e91a5d2b4 240 Pfam PF00005 ABC transporter 25 171 1.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15625 5cba54636f534d753d1308a709b251c9 382 Gene3D G3DSA:1.20.1250.20 3 188 1.7E-23 T 28-03-2018 CO704_RS15625 5cba54636f534d753d1308a709b251c9 382 SUPERFAMILY SSF103473 6 372 2.49E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS15625 5cba54636f534d753d1308a709b251c9 382 Pfam PF07690 Major Facilitator Superfamily 11 228 3.5E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS15625 5cba54636f534d753d1308a709b251c9 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 36.033 T 28-03-2018 IPR023745 MSF-type transporter, YcaD CO704_RS15625 5cba54636f534d753d1308a709b251c9 382 Gene3D G3DSA:1.20.1250.20 189 378 7.0E-21 T 28-03-2018 CO704_RS15465 4c3086a76e94cf959011338ef6b0b43e 381 Gene3D G3DSA:3.20.20.30 1 354 7.6E-92 T 28-03-2018 CO704_RS15465 4c3086a76e94cf959011338ef6b0b43e 381 SUPERFAMILY SSF51679 3 349 2.09E-97 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS15465 4c3086a76e94cf959011338ef6b0b43e 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 5.7E-190 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CO704_RS15465 4c3086a76e94cf959011338ef6b0b43e 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 69.784 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CO704_RS15465 4c3086a76e94cf959011338ef6b0b43e 381 Pfam PF00296 Luciferase-like monooxygenase 4 326 1.2E-87 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 SUPERFAMILY SSF48208 48 543 1.22E-167 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 ProSitePatterns PS00928 Trehalase signature 2. 455 464 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 200 218 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 524 537 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 309 326 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 448 464 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 275 292 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 341 358 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 PRINTS PR00744 Glycosyl hydrolase family 37 signature 384 400 3.6E-44 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 Gene3D G3DSA:1.50.10.10 44 548 7.8E-150 T 28-03-2018 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 Pfam PF01204 Trehalase 64 539 9.7E-163 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS09315 d510452f7fb4eaf351e32bc6bbc332a0 584 ProSitePatterns PS00927 Trehalase signature 1. 158 171 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 Gene3D G3DSA:3.30.70.270 218 388 2.4E-22 T 28-03-2018 CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 SMART SM00052 395 635 1.1E-41 T 28-03-2018 IPR001633 EAL domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 SUPERFAMILY SSF141868 402 642 1.07E-32 T 28-03-2018 IPR001633 EAL domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 Pfam PF00563 EAL domain 404 628 1.5E-34 T 28-03-2018 IPR001633 EAL domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 Gene3D G3DSA:3.20.20.450 389 645 1.1E-39 T 28-03-2018 IPR001633 EAL domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 SMART SM00267 213 385 2.2E-28 T 28-03-2018 IPR000160 GGDEF domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 1.1E-25 T 28-03-2018 IPR000160 GGDEF domain CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 35 130 5.4E-24 T 28-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CO704_RS01425 e27d0c49c934cfe6d1b84b589a43fd9d 646 SUPERFAMILY SSF55073 230 387 6.36E-20 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS25730 464dc6edc5465081d1a85b53c9048a83 154 SUPERFAMILY SSF47413 6 73 3.66E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25730 464dc6edc5465081d1a85b53c9048a83 154 Gene3D G3DSA:1.10.260.40 1 74 2.0E-18 T 28-03-2018 CO704_RS25730 464dc6edc5465081d1a85b53c9048a83 154 SMART SM00530 12 67 2.3E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25730 464dc6edc5465081d1a85b53c9048a83 154 Pfam PF13560 Helix-turn-helix domain 9 64 3.8E-14 T 28-03-2018 CO704_RS16425 535d516d6981b98ed556a64daee342a3 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.64 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CO704_RS16425 535d516d6981b98ed556a64daee342a3 161 Gene3D G3DSA:3.30.70.640 2 158 1.9E-68 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CO704_RS16425 535d516d6981b98ed556a64daee342a3 161 Pfam PF01967 MoaC family 15 150 3.2E-55 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CO704_RS16425 535d516d6981b98ed556a64daee342a3 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 9.5E-73 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CO704_RS16425 535d516d6981b98ed556a64daee342a3 161 SUPERFAMILY SSF55040 11 155 8.63E-62 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.632 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 Pfam PF00436 Single-strand binding protein family 3 89 5.8E-13 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.0E-35 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 PIRSF PIRSF003135 1 101 3.3E-48 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 SUPERFAMILY SSF50249 1 103 2.5E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS20855 8a0a82895146a9e49dd59454a3e46513 104 Gene3D G3DSA:2.40.50.140 2 104 1.8E-12 T 28-03-2018 CO704_RS13720 f58752264f497f67441ef0c7edd141db 277 Gene3D G3DSA:3.40.50.300 192 275 0.017 T 28-03-2018 CO704_RS13720 f58752264f497f67441ef0c7edd141db 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.284 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CO704_RS13720 f58752264f497f67441ef0c7edd141db 277 Gene3D G3DSA:3.40.50.300 151 191 0.061 T 28-03-2018 CO704_RS13720 f58752264f497f67441ef0c7edd141db 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 1.3E-72 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CO704_RS16260 8f02bdeaa449722893beafbfc7f0deb4 191 SUPERFAMILY SSF101874 23 185 1.7E-25 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS16260 8f02bdeaa449722893beafbfc7f0deb4 191 Gene3D G3DSA:2.40.128.110 24 191 3.3E-25 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS16260 8f02bdeaa449722893beafbfc7f0deb4 191 Pfam PF04264 YceI-like domain 33 184 4.0E-19 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS16260 8f02bdeaa449722893beafbfc7f0deb4 191 SMART SM00867 24 186 5.8E-18 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS03840 b43379b395fd0462f5f1e4e80544e96c 169 Gene3D G3DSA:3.90.950.20 1 166 2.4E-60 T 28-03-2018 CO704_RS03840 b43379b395fd0462f5f1e4e80544e96c 169 SUPERFAMILY SSF142433 5 160 3.14E-57 T 28-03-2018 IPR008136 CinA, C-terminal CO704_RS03840 b43379b395fd0462f5f1e4e80544e96c 169 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 4.0E-56 T 28-03-2018 IPR008136 CinA, C-terminal CO704_RS03840 b43379b395fd0462f5f1e4e80544e96c 169 Pfam PF02464 Competence-damaged protein 8 159 3.6E-59 T 28-03-2018 IPR008136 CinA, C-terminal CO704_RS11105 5d5430574532cba2723e7859d23463f0 351 Pfam PF03060 Nitronate monooxygenase 5 347 1.3E-75 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CO704_RS11105 5d5430574532cba2723e7859d23463f0 351 SUPERFAMILY SSF51412 5 73 9.16E-61 T 28-03-2018 CO704_RS11105 5d5430574532cba2723e7859d23463f0 351 SUPERFAMILY SSF51412 103 348 9.16E-61 T 28-03-2018 CO704_RS11105 5d5430574532cba2723e7859d23463f0 351 Gene3D G3DSA:3.20.20.70 2 350 4.7E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS14680 c57dd9622dfef69d06cb66d4e5376fa9 141 Gene3D G3DSA:1.20.58.300 1 114 1.7E-17 T 28-03-2018 CO704_RS14680 c57dd9622dfef69d06cb66d4e5376fa9 141 Pfam PF05130 FlgN protein 3 129 2.6E-19 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CO704_RS14680 c57dd9622dfef69d06cb66d4e5376fa9 141 SUPERFAMILY SSF140566 2 113 1.12E-14 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CO704_RS15395 27f5ff5ab7afe44a71cc37c7738311cb 362 Pfam PF13343 Bacterial extracellular solute-binding protein 112 314 3.3E-14 T 28-03-2018 CO704_RS15395 27f5ff5ab7afe44a71cc37c7738311cb 362 Gene3D G3DSA:3.40.190.10 198 333 3.5E-13 T 28-03-2018 CO704_RS15395 27f5ff5ab7afe44a71cc37c7738311cb 362 Gene3D G3DSA:3.40.190.10 42 197 4.9E-17 T 28-03-2018 CO704_RS15395 27f5ff5ab7afe44a71cc37c7738311cb 362 SUPERFAMILY SSF53850 44 345 1.23E-52 T 28-03-2018 CO704_RS10835 1ab47b9dcda7674f25bc51206cee0866 311 SUPERFAMILY SSF51735 112 276 3.31E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS10835 1ab47b9dcda7674f25bc51206cee0866 311 Gene3D G3DSA:3.90.180.10 2 146 5.1E-24 T 28-03-2018 CO704_RS10835 1ab47b9dcda7674f25bc51206cee0866 311 Gene3D G3DSA:3.40.50.720 147 259 2.2E-12 T 28-03-2018 CO704_RS10835 1ab47b9dcda7674f25bc51206cee0866 311 SUPERFAMILY SSF50129 5 143 1.67E-22 T 28-03-2018 IPR011032 GroES-like CO704_RS23750 d91adc334e803f20c0e673696e7908e1 349 Gene3D G3DSA:3.40.50.2000 1 150 6.3E-33 T 28-03-2018 CO704_RS23750 d91adc334e803f20c0e673696e7908e1 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 4.7E-86 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CO704_RS23750 d91adc334e803f20c0e673696e7908e1 349 SUPERFAMILY SSF53756 1 344 2.98E-98 T 28-03-2018 CO704_RS23750 d91adc334e803f20c0e673696e7908e1 349 Gene3D G3DSA:3.40.50.2000 163 348 1.4E-43 T 28-03-2018 CO704_RS23750 d91adc334e803f20c0e673696e7908e1 349 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 1.7E-166 T 28-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CO704_RS18695 9d03128c4b124f01342304dfdf3f0a65 176 SUPERFAMILY SSF56024 26 171 1.08E-34 T 28-03-2018 CO704_RS18695 9d03128c4b124f01342304dfdf3f0a65 176 Gene3D G3DSA:3.30.870.10 23 175 2.4E-27 T 28-03-2018 CO704_RS18695 9d03128c4b124f01342304dfdf3f0a65 176 Pfam PF13091 PLD-like domain 41 166 1.5E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 Hamap MF_01151 Protein GrpE [grpE]. 4 200 20.658 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 Pfam PF01025 GrpE 41 200 7.0E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 SUPERFAMILY SSF51064 145 200 1.16E-16 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 PRINTS PR00773 GrpE protein signature 97 112 6.8E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 PRINTS PR00773 GrpE protein signature 152 167 6.8E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 PRINTS PR00773 GrpE protein signature 179 198 6.8E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 PRINTS PR00773 GrpE protein signature 69 85 6.8E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 SUPERFAMILY SSF58014 45 144 3.27E-26 T 28-03-2018 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 Gene3D G3DSA:2.30.22.10 144 200 2.7E-19 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CO704_RS04375 c23a9360a5af8d16b1477834320cb21b 201 Gene3D G3DSA:3.90.20.20 4 143 7.1E-27 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 SUPERFAMILY SSF56935 144 557 1.04E-90 T 28-03-2018 CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 Gene3D G3DSA:2.40.170.10 144 557 1.8E-91 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 Pfam PF11471 Maltoporin periplasmic N-terminal extension 7 56 1.6E-9 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 Gene3D G3DSA:1.10.287.510 30 105 6.3E-4 T 28-03-2018 CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 151 552 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS20440 9cc83e53134c442b86e57ebdce498ac0 557 Pfam PF02264 LamB porin 146 557 1.9E-74 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.6E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 5.6E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.6E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.6E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 Pfam PF01047 MarR family 33 91 1.7E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 Gene3D G3DSA:1.10.10.10 3 141 1.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 SMART SM00347 26 127 3.7E-30 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 5 147 39.611 T 28-03-2018 IPR023071 Transcriptional regulator, SlyA CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 SUPERFAMILY SSF46785 9 143 1.09E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13470 ad4ec1a77427f8235af627f61bd8b307 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CO704_RS18800 187d2c9ded0809c2c8c1faccbbf6095f 245 Gene3D G3DSA:2.60.40.10 26 160 3.4E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS23135 a27e0df44a66ff5ae1133a2dc1eed7d9 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CO704_RS23135 a27e0df44a66ff5ae1133a2dc1eed7d9 253 SUPERFAMILY SSF53167 3 252 1.7E-72 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS23135 a27e0df44a66ff5ae1133a2dc1eed7d9 253 Gene3D G3DSA:3.40.50.1580 3 253 9.0E-57 T 28-03-2018 CO704_RS23135 a27e0df44a66ff5ae1133a2dc1eed7d9 253 Pfam PF01048 Phosphorylase superfamily 21 243 6.5E-40 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CO704_RS23135 a27e0df44a66ff5ae1133a2dc1eed7d9 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.5E-127 T 28-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 SUPERFAMILY SSF53187 298 380 4.79E-75 T 28-03-2018 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 SUPERFAMILY SSF53187 2 197 4.79E-75 T 28-03-2018 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 PIRSF PIRSF005962 1 384 2.6E-115 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 SUPERFAMILY SSF55031 182 289 2.36E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 Gene3D G3DSA:3.40.630.10 216 384 1.1E-19 T 28-03-2018 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 Pfam PF01546 Peptidase family M20/M25/M40 73 376 5.1E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 Gene3D G3DSA:3.40.630.10 1 215 4.6E-45 T 28-03-2018 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 365 2.4E-108 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS02660 8eaf22c4a4e968a7baa7e9fe721972f1 384 Pfam PF07687 Peptidase dimerisation domain 182 281 4.2E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 Gene3D G3DSA:1.10.10.10 144 229 5.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 Pfam PF13545 Crp-like helix-turn-helix domain 160 226 2.3E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 SUPERFAMILY SSF51206 33 148 4.19E-26 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 SMART SM00419 171 219 4.2E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 SUPERFAMILY SSF46785 158 227 3.17E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 Pfam PF00027 Cyclic nucleotide-binding domain 41 124 7.7E-18 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 SMART SM00100 22 140 9.1E-18 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS02275 17608aa46ad099212554a99ca1afef9d 229 Gene3D G3DSA:2.60.120.10 12 143 2.5E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS22275 4ec0d7d4bf9c6f01cc29a95b6c074476 406 SMART SM01119 295 393 1.9E-31 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CO704_RS22275 4ec0d7d4bf9c6f01cc29a95b6c074476 406 Gene3D G3DSA:3.20.20.10 36 268 1.1E-36 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS22275 4ec0d7d4bf9c6f01cc29a95b6c074476 406 Pfam PF14031 Putative serine dehydratase domain 295 392 3.8E-14 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CO704_RS22275 4ec0d7d4bf9c6f01cc29a95b6c074476 406 SUPERFAMILY SSF51419 34 267 5.01E-33 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS22275 4ec0d7d4bf9c6f01cc29a95b6c074476 406 Pfam PF01168 Alanine racemase, N-terminal domain 34 199 7.2E-15 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS18000 367aadb146b881667d10b202cf1ecf97 100 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 3 95 1.1E-15 T 28-03-2018 IPR014057 Addiction module antidote protein, HI1420 CO704_RS18000 367aadb146b881667d10b202cf1ecf97 100 Gene3D G3DSA:1.10.260.40 39 100 1.6E-4 T 28-03-2018 CO704_RS18000 367aadb146b881667d10b202cf1ecf97 100 SUPERFAMILY SSF47413 44 98 1.52E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS10750 81b8f10cc54ba91532f24a70a834dc81 70 Pfam PF13999 MarB protein 5 67 1.9E-7 T 28-03-2018 IPR025732 MarB protein CO704_RS12000 988e8e63f2d659d093f417e6deec5fc9 151 Pfam PF05232 Chlorhexidine efflux transporter 74 136 7.6E-23 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter CO704_RS12000 988e8e63f2d659d093f417e6deec5fc9 151 Pfam PF05232 Chlorhexidine efflux transporter 7 68 1.6E-26 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 SMART SM00304 212 264 8.1E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 175 3.8E-15 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 479 2.4E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.9E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.9E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.9E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 10 35 1.9E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.9E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 Gene3D G3DSA:1.10.287.950 320 516 3.9E-46 T 28-03-2018 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 Gene3D G3DSA:1.10.287.950 55 319 2.3E-16 T 28-03-2018 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 SMART SM00283 265 512 8.1E-78 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 Pfam PF00672 HAMP domain 212 259 1.5E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS03205 f51c44aa4729741480cbcbef2ce070df 516 SUPERFAMILY SSF58104 232 513 1.83E-68 T 28-03-2018 CO704_RS24960 0bd33e865d293f11132c042b52136774 106 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 22 91 2.0E-11 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS24960 0bd33e865d293f11132c042b52136774 106 Gene3D G3DSA:3.10.450.160 20 100 5.1E-7 T 28-03-2018 CO704_RS24960 0bd33e865d293f11132c042b52136774 106 Pfam PF11776 Nickel/cobalt transporter regulator 43 92 5.3E-11 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CO704_RS11150 db98adc84df343b628e5a15dc5f2907b 324 SUPERFAMILY SSF53686 9 317 3.14E-98 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11150 db98adc84df343b628e5a15dc5f2907b 324 Gene3D G3DSA:3.40.50.1100 135 324 2.6E-45 T 28-03-2018 CO704_RS11150 db98adc84df343b628e5a15dc5f2907b 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 308 1.6E-79 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS11150 db98adc84df343b628e5a15dc5f2907b 324 Gene3D G3DSA:3.40.50.1100 33 134 4.2E-30 T 28-03-2018 CO704_RS04265 40bd970ee4327fb5907a0bf4c206a5c0 148 Gene3D G3DSA:2.40.160.20 2 91 7.5E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS19240 77aba03ca0d119f607927f349713edf9 198 SUPERFAMILY SSF53098 3 195 8.65E-70 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19240 77aba03ca0d119f607927f349713edf9 198 Pfam PF01351 Ribonuclease HII 13 188 9.6E-39 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain CO704_RS19240 77aba03ca0d119f607927f349713edf9 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.589 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 CO704_RS19240 77aba03ca0d119f607927f349713edf9 198 Gene3D G3DSA:3.30.420.10 3 196 2.1E-68 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS11905 f39ac058e1cf3ba318ea0f55fc923f98 143 Pfam PF03724 META domain 29 134 2.1E-21 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CO704_RS10960 16e51a548a805efdbc556fe1eab1e0b6 490 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 435 1.4E-99 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS10960 16e51a548a805efdbc556fe1eab1e0b6 490 Pfam PF00860 Permease family 26 405 6.8E-90 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS10960 16e51a548a805efdbc556fe1eab1e0b6 490 TIGRFAM TIGR03173 pbuX: xanthine permease 30 438 5.8E-138 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CO704_RS10960 16e51a548a805efdbc556fe1eab1e0b6 490 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 353 373 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Gene3D G3DSA:3.30.230.10 2 206 1.6E-58 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.3E-45 T 28-03-2018 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 1.3E-45 T 28-03-2018 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.3E-45 T 28-03-2018 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.3E-45 T 28-03-2018 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Pfam PF10509 Galactokinase galactose-binding signature 11 57 8.3E-21 T 28-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 1.3E-168 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PIRSF PIRSF000530 1 382 1.4E-124 T 28-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.204 T 28-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 SUPERFAMILY SSF54211 3 202 3.19E-63 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00473 Galactokinase signature 263 277 6.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00473 Galactokinase signature 27 45 6.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00473 Galactokinase signature 92 103 6.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 PRINTS PR00473 Galactokinase signature 112 130 6.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Gene3D G3DSA:3.30.70.890 207 381 3.7E-57 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 SUPERFAMILY SSF55060 205 380 1.57E-52 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.2E-14 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.3E-11 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CO704_RS16550 00b9501d2b80f876003c5b0aa0e9c96f 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 28-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CO704_RS02345 a3c928e5901b1b5283230bfd31bc24ad 184 SUPERFAMILY SSF49401 33 184 1.04E-37 T 28-03-2018 IPR008966 Adhesion domain CO704_RS02345 a3c928e5901b1b5283230bfd31bc24ad 184 Gene3D G3DSA:2.60.40.1090 32 184 4.2E-38 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS02345 a3c928e5901b1b5283230bfd31bc24ad 184 Pfam PF00419 Fimbrial protein 35 184 7.1E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 3.9E-9 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 SUPERFAMILY SSF51735 102 268 5.25E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.735 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 Gene3D G3DSA:3.40.50.10860 1 110 1.2E-36 T 28-03-2018 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 1.2E-99 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 Gene3D G3DSA:3.40.50.720 111 272 8.3E-31 T 28-03-2018 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 SUPERFAMILY SSF53223 2 101 1.21E-31 T 28-03-2018 CO704_RS01290 6f8036599f6d64095b7ffa0db51c3d16 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 5.2E-24 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.8E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 Gene3D G3DSA:1.10.3860.10 1 411 1.0E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 SUPERFAMILY SSF118215 7 404 6.28E-102 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS08720 d1694306ead35578aa38e5612999eda9 421 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 1.5E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 SUPERFAMILY SSF53822 60 332 6.85E-86 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 Gene3D G3DSA:1.10.260.40 2 55 1.3E-21 T 28-03-2018 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 SMART SM00354 1 71 1.6E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 Gene3D G3DSA:3.40.50.2300 174 310 4.3E-43 T 28-03-2018 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 SUPERFAMILY SSF47413 1 59 1.69E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.4E-37 T 28-03-2018 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS03310 705343196cac14f6e292bd26d403afb8 336 Gene3D G3DSA:3.40.50.2300 56 173 1.7E-30 T 28-03-2018 CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 Pfam PF03734 L,D-transpeptidase catalytic domain 373 540 1.9E-29 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 Pfam PF01471 Putative peptidoglycan binding domain 308 344 9.8E-5 T 28-03-2018 IPR002477 Peptidoglycan binding-like CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 Gene3D G3DSA:2.40.440.10 370 549 1.8E-22 T 28-03-2018 CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 SUPERFAMILY SSF47090 307 352 1.18E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 SUPERFAMILY SSF141523 371 424 7.46E-19 T 28-03-2018 CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 SUPERFAMILY SSF141523 481 530 7.46E-19 T 28-03-2018 CO704_RS15515 fb7192bb73601cc18fb6a1858bb0468a 612 Gene3D G3DSA:1.10.101.10 240 350 1.8E-18 T 28-03-2018 IPR002477 Peptidoglycan binding-like CO704_RS06865 09e19f4b6b59f5c303ce0821c6ff0c96 325 Gene3D G3DSA:3.40.50.300 1 195 7.3E-31 T 28-03-2018 CO704_RS06865 09e19f4b6b59f5c303ce0821c6ff0c96 325 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 1.2E-4 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS06865 09e19f4b6b59f5c303ce0821c6ff0c96 325 SUPERFAMILY SSF52540 6 172 2.94E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06865 09e19f4b6b59f5c303ce0821c6ff0c96 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 169 1.4E-41 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 SUPERFAMILY SSF46689 207 252 1.52E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 Gene3D G3DSA:1.10.10.60 147 206 7.9E-10 T 28-03-2018 CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 Gene3D G3DSA:2.60.120.10 2 105 8.2E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 Gene3D G3DSA:1.10.10.60 207 252 4.9E-7 T 28-03-2018 CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 Pfam PF02311 AraC-like ligand binding domain 29 132 1.9E-9 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 SUPERFAMILY SSF51182 13 173 1.07E-15 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 SMART SM00342 168 250 7.1E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS18630 362a9592c84347a9f0224b59f12c8261 254 Pfam PF12833 Helix-turn-helix domain 176 250 4.8E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 Pfam PF02685 Glucokinase 6 315 2.8E-120 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 Gene3D G3DSA:3.30.420.40 1 108 6.0E-15 T 28-03-2018 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 4.4E-138 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 Gene3D G3DSA:3.40.367.20 109 299 5.6E-27 T 28-03-2018 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 SUPERFAMILY SSF53067 4 318 3.32E-64 T 28-03-2018 CO704_RS05975 0381dd3dda979ece7cf3cd049c9ece78 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.168 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CO704_RS23110 c48404dfa51e1cd54d9f83c4461c6272 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 22.719 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CO704_RS23110 c48404dfa51e1cd54d9f83c4461c6272 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 47 2.9E-21 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CO704_RS23110 c48404dfa51e1cd54d9f83c4461c6272 84 Pfam PF02416 mttA/Hcf106 family 3 52 3.1E-15 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CO704_RS08815 fb7aa7fee34626e6a7f75ea2023b2b4f 323 SUPERFAMILY SSF53335 91 323 1.15E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08815 fb7aa7fee34626e6a7f75ea2023b2b4f 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 1.2E-145 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CO704_RS08815 fb7aa7fee34626e6a7f75ea2023b2b4f 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 53.619 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CO704_RS08815 fb7aa7fee34626e6a7f75ea2023b2b4f 323 Gene3D G3DSA:3.40.50.150 56 323 1.7E-21 T 28-03-2018 CO704_RS08815 fb7aa7fee34626e6a7f75ea2023b2b4f 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.7E-166 T 28-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CO704_RS19850 779e8e913d926787bc92d5ad91109e80 209 Gene3D G3DSA:3.30.980.10 158 209 1.4E-5 T 28-03-2018 CO704_RS19850 779e8e913d926787bc92d5ad91109e80 209 Gene3D G3DSA:3.30.980.10 85 157 5.4E-7 T 28-03-2018 CO704_RS19850 779e8e913d926787bc92d5ad91109e80 209 SUPERFAMILY SSF55186 85 201 2.49E-21 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CO704_RS19850 779e8e913d926787bc92d5ad91109e80 209 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 200 1.8E-5 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CO704_RS19850 779e8e913d926787bc92d5ad91109e80 209 SUPERFAMILY SSF50447 1 86 4.24E-15 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PIRSF PIRSF000126 1 261 5.2E-69 T 28-03-2018 CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 Gene3D G3DSA:3.40.50.720 3 253 1.0E-42 T 28-03-2018 CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 Pfam PF00106 short chain dehydrogenase 7 192 1.9E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS15055 47e7bb48fd165d9bfd8ab7cb9ee2452e 262 SUPERFAMILY SSF51735 5 236 8.95E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07840 274883c0976658c5ff3704aa8fff6147 311 Gene3D G3DSA:3.10.350.10 38 85 5.0E-5 T 28-03-2018 CO704_RS07840 274883c0976658c5ff3704aa8fff6147 311 Gene3D G3DSA:2.40.440.10 90 230 3.2E-29 T 28-03-2018 CO704_RS07840 274883c0976658c5ff3704aa8fff6147 311 SUPERFAMILY SSF141523 173 230 5.49E-27 T 28-03-2018 CO704_RS07840 274883c0976658c5ff3704aa8fff6147 311 SUPERFAMILY SSF141523 95 145 5.49E-27 T 28-03-2018 CO704_RS07840 274883c0976658c5ff3704aa8fff6147 311 Pfam PF03734 L,D-transpeptidase catalytic domain 96 228 4.9E-18 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS25380 f4f66ba6ebc3c47877ad88e4fbf48e33 1848 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1404 1488 1.4E-19 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS25380 f4f66ba6ebc3c47877ad88e4fbf48e33 1848 Pfam PF05593 RHS Repeat 858 894 2.9E-10 T 28-03-2018 IPR031325 RHS repeat CO704_RS25380 f4f66ba6ebc3c47877ad88e4fbf48e33 1848 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 858 897 6.6E-8 T 28-03-2018 IPR006530 YD repeat CO704_RS25380 f4f66ba6ebc3c47877ad88e4fbf48e33 1848 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1293 1320 0.0032 T 28-03-2018 IPR006530 YD repeat CO704_RS25380 f4f66ba6ebc3c47877ad88e4fbf48e33 1848 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 632 660 0.0034 T 28-03-2018 IPR006530 YD repeat CO704_RS10145 44d7d03c83eaaa593b587ac89602ad0f 220 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 208 3.1E-47 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS10145 44d7d03c83eaaa593b587ac89602ad0f 220 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 17 211 1.4E-22 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CO704_RS10145 44d7d03c83eaaa593b587ac89602ad0f 220 PIRSF PIRSF012337 3 220 1.3E-60 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 SUPERFAMILY SSF81338 2 227 5.23E-68 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.627 T 28-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 1.2E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 Gene3D G3DSA:1.20.1080.10 1 231 4.0E-71 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 6.3E-64 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS15745 1de2730f2737e6185985d2edea378b01 231 Pfam PF00230 Major intrinsic protein 2 223 7.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CO704_RS03825 1e0217119e94154eb0303e6d37d1d623 231 SMART SM00382 26 206 4.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS03825 1e0217119e94154eb0303e6d37d1d623 231 Pfam PF00005 ABC transporter 19 158 2.2E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS03825 1e0217119e94154eb0303e6d37d1d623 231 Gene3D G3DSA:3.40.50.300 1 231 1.5E-47 T 28-03-2018 CO704_RS03825 1e0217119e94154eb0303e6d37d1d623 231 SUPERFAMILY SSF52540 1 207 7.56E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03825 1e0217119e94154eb0303e6d37d1d623 231 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 SUPERFAMILY SSF50249 3 69 2.57E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 PIRSF PIRSF002599 1 70 2.1E-25 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 Gene3D G3DSA:2.40.50.140 1 70 6.1E-28 T 28-03-2018 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.1E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS20485 681a1f30b273ec62e5d4ee20b59bba7d 70 SMART SM00357 6 70 6.2E-30 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 Pfam PF01371 Trp repressor protein 18 103 6.9E-28 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 12 101 3.0E-30 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 PIRSF PIRSF003196 2 109 8.6E-39 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 TIGRFAM TIGR01321 TrpR: trp operon repressor 13 104 5.5E-36 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 SUPERFAMILY SSF48295 7 104 2.3E-28 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 Gene3D G3DSA:1.10.1270.10 8 108 8.0E-24 T 28-03-2018 CO704_RS20045 a44a45bfd65065fbc6427187401cc668 112 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.062 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CO704_RS15560 5baeb420e3dfa1747af4b86b83cfea5b 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 1.2E-79 T 28-03-2018 IPR009351 Protein of unknown function DUF1006 CO704_RS13020 cb544b6c8e1fcdf10e7b69aa18b56826 107 SUPERFAMILY SSF103481 7 103 7.32E-14 T 28-03-2018 CO704_RS13020 cb544b6c8e1fcdf10e7b69aa18b56826 107 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 107 29.665 T 28-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CO704_RS13020 cb544b6c8e1fcdf10e7b69aa18b56826 107 Pfam PF00892 EamA-like transporter family 7 102 3.4E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS04350 12655f9755529c22b5372ff32be72b4d 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-32 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CO704_RS04350 12655f9755529c22b5372ff32be72b4d 145 SUPERFAMILY SSF55961 1 142 7.13E-36 T 28-03-2018 CO704_RS04350 12655f9755529c22b5372ff32be72b4d 145 Gene3D G3DSA:3.30.530.20 1 144 6.7E-33 T 28-03-2018 IPR023393 START-like domain CO704_RS13320 b8136285ecc46ffa01ee85ec045060c9 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 4.0E-103 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CO704_RS13320 b8136285ecc46ffa01ee85ec045060c9 332 PIRSF PIRSF026166 1 332 3.8E-132 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 SMART SM00825 Beta-ketoacyl synthase 6 412 1.7E-8 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 SUPERFAMILY SSF53901 217 411 4.09E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 8.1E-37 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 Gene3D G3DSA:3.40.47.10 1 258 1.1E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 Gene3D G3DSA:3.40.47.10 263 412 2.3E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.1E-30 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 SUPERFAMILY SSF53901 4 254 4.51E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CO704_RS00070 6b13980dd91c1b832cc4bf3d4d027917 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 Pfam PF07687 Peptidase dimerisation domain 184 279 1.1E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 PIRSF PIRSF005962 2 388 1.8E-131 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 SUPERFAMILY SSF55031 182 295 6.67E-31 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 Gene3D G3DSA:3.40.630.10 1 267 5.1E-68 T 28-03-2018 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 Gene3D G3DSA:3.40.630.10 268 388 3.4E-21 T 28-03-2018 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 SUPERFAMILY SSF53187 297 387 3.04E-88 T 28-03-2018 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 SUPERFAMILY SSF53187 3 196 3.04E-88 T 28-03-2018 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 375 9.8E-110 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CO704_RS02410 88f6c6fe186768f9a35a624f35982f08 388 Pfam PF01546 Peptidase family M20/M25/M40 72 383 2.9E-35 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 Gene3D G3DSA:3.40.190.10 181 268 1.6E-26 T 28-03-2018 CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 SUPERFAMILY SSF46785 7 117 3.87E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.8E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 SUPERFAMILY SSF53850 93 305 3.08E-41 T 28-03-2018 CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 Pfam PF03466 LysR substrate binding domain 93 301 3.5E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 Gene3D G3DSA:3.40.190.10 94 180 5.2E-11 T 28-03-2018 CO704_RS04070 864887db99872d4c8b568c6691fa65f4 310 Gene3D G3DSA:1.10.10.10 3 89 1.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 SMART SM00257 120 164 1.2E-9 T 28-03-2018 IPR018392 LysM domain CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 Gene3D G3DSA:3.10.350.10 109 245 3.9E-11 T 28-03-2018 CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 Gene3D G3DSA:2.70.70.10 246 376 2.1E-35 T 28-03-2018 CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 Pfam PF01551 Peptidase family M23 277 370 1.2E-30 T 28-03-2018 IPR016047 Peptidase M23 CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 Pfam PF01476 LysM domain 121 163 2.2E-9 T 28-03-2018 IPR018392 LysM domain CO704_RS03725 de2d13e3aa773de4fc260187df2775aa 377 SUPERFAMILY SSF51261 120 374 2.3E-50 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 Pfam PF01343 Peptidase family S49 390 541 4.3E-51 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 Pfam PF01343 Peptidase family S49 139 287 4.9E-38 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 5.1E-53 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 SUPERFAMILY SSF52096 466 528 2.37E-42 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 SUPERFAMILY SSF52096 322 438 2.37E-42 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 Gene3D G3DSA:3.90.226.10 317 610 8.9E-49 T 28-03-2018 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 3.9E-241 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 Gene3D G3DSA:3.40.1750.10 187 292 2.8E-23 T 28-03-2018 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 PIRSF PIRSF001217 8 616 1.1E-218 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 SUPERFAMILY SSF52096 35 179 8.95E-28 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS14025 b62f7dbeda199d4273b2d0448df8db78 616 SUPERFAMILY SSF52096 210 285 8.95E-28 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS20200 01a83cce56b468776434e8b41fb6b30c 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 4.8E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS20200 01a83cce56b468776434e8b41fb6b30c 101 Gene3D G3DSA:3.40.50.2300 2 101 6.5E-37 T 28-03-2018 CO704_RS20200 01a83cce56b468776434e8b41fb6b30c 101 SUPERFAMILY SSF52794 1 100 3.92E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 Gene3D G3DSA:3.40.50.720 1 141 1.1E-38 T 28-03-2018 CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 7.8E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 SUPERFAMILY SSF51735 2 158 1.12E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 208 5.9E-6 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 Gene3D G3DSA:3.30.360.10 142 374 2.1E-48 T 28-03-2018 CO704_RS02635 55356d4ebcf351b851bb28fc011eed99 377 SUPERFAMILY SSF55347 135 307 2.13E-36 T 28-03-2018 CO704_RS17615 d3f2e83f2090de9787d356c9e1a7a3e5 403 SUPERFAMILY SSF56349 98 380 3.83E-67 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS17615 d3f2e83f2090de9787d356c9e1a7a3e5 403 Pfam PF13356 Arm DNA-binding domain 3 88 4.0E-20 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS17615 d3f2e83f2090de9787d356c9e1a7a3e5 403 Gene3D G3DSA:1.10.150.130 88 205 7.1E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS17615 d3f2e83f2090de9787d356c9e1a7a3e5 403 Pfam PF00589 Phage integrase family 207 370 9.4E-28 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS17615 d3f2e83f2090de9787d356c9e1a7a3e5 403 Gene3D G3DSA:1.10.443.10 206 385 2.7E-30 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 4.7E-12 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 SUPERFAMILY SSF52833 1 194 3.43E-65 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 Gene3D G3DSA:3.40.30.10 3 161 3.5E-39 T 28-03-2018 CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 Gene3D G3DSA:3.30.1020.10 162 199 6.4E-15 T 28-03-2018 CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 Pfam PF00578 AhpC/TSA family 5 139 2.3E-33 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS18370 62adf4e123a706d2af6e02920bd508c7 200 PIRSF PIRSF000239 1 199 4.2E-59 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CO704_RS20385 27c6dbcea620acb8ecb810b8d253b50e 324 Gene3D G3DSA:3.40.50.2300 24 141 6.0E-27 T 28-03-2018 CO704_RS20385 27c6dbcea620acb8ecb810b8d253b50e 324 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 279 7.7E-37 T 28-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 CO704_RS20385 27c6dbcea620acb8ecb810b8d253b50e 324 SUPERFAMILY SSF53822 27 232 6.64E-13 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS20385 27c6dbcea620acb8ecb810b8d253b50e 324 Gene3D G3DSA:3.40.50.2300 142 322 1.6E-23 T 28-03-2018 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 212 6.0E-11 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 Gene3D G3DSA:2.60.40.10 137 220 3.3E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 SUPERFAMILY SSF49354 16 135 1.15E-40 T 28-03-2018 IPR008962 PapD-like CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 SUPERFAMILY SSF49584 130 215 1.7E-21 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 90 107 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 Gene3D G3DSA:2.60.40.10 17 133 1.5E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 16 135 6.5E-38 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 PRINTS PR00969 Pili chaperone signature 91 108 1.5E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 PRINTS PR00969 Pili chaperone signature 152 167 1.5E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 PRINTS PR00969 Pili chaperone signature 17 26 1.5E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 PRINTS PR00969 Pili chaperone signature 117 132 1.5E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS18750 581182035f53d8025de6abeb40b27c55 220 PRINTS PR00969 Pili chaperone signature 62 83 1.5E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS03080 aa4b32927ecebc20d7652d56ebfb42da 88 SUPERFAMILY SSF109910 1 78 8.37E-27 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CO704_RS03080 aa4b32927ecebc20d7652d56ebfb42da 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.6E-25 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CO704_RS03080 aa4b32927ecebc20d7652d56ebfb42da 88 Gene3D G3DSA:1.10.150.250 1 85 2.9E-26 T 28-03-2018 CO704_RS18590 663939ad1b73a7bc1e6b1f184c5767a2 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 316 4.6E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18590 663939ad1b73a7bc1e6b1f184c5767a2 319 SUPERFAMILY SSF161098 88 299 4.8E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18590 663939ad1b73a7bc1e6b1f184c5767a2 319 Gene3D G3DSA:1.10.3720.10 1 305 8.1E-43 T 28-03-2018 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 PIRSF PIRSF002401 1 376 4.5E-140 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.321 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 Pfam PF01018 GTP1/OBG 4 157 5.7E-59 T 28-03-2018 IPR006169 GTP1/OBG domain CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 6.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 6.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 Gene3D G3DSA:3.40.50.300 159 374 3.3E-31 T 28-03-2018 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 Gene3D G3DSA:2.70.210.12 2 156 2.3E-58 T 28-03-2018 IPR006169 GTP1/OBG domain CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.5E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 SUPERFAMILY SSF52540 152 334 3.6E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 SUPERFAMILY SSF82051 2 157 1.14E-56 T 28-03-2018 IPR006169 GTP1/OBG domain CO704_RS01730 168737da853e1c3ecd4e67f2746cde95 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 8.9E-149 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CO704_RS07735 7149304929a429cc96ed6377f078aea9 154 SUPERFAMILY SSF55136 1 153 6.98E-32 T 28-03-2018 CO704_RS07735 7149304929a429cc96ed6377f078aea9 154 Gene3D G3DSA:3.20.80.10 1 154 3.2E-22 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain CO704_RS07735 7149304929a429cc96ed6377f078aea9 154 SMART SM00871 1 152 1.9E-26 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding CO704_RS07735 7149304929a429cc96ed6377f078aea9 154 Pfam PF06445 GyrI-like small molecule binding domain 1 151 3.1E-22 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain CO704_RS07735 7149304929a429cc96ed6377f078aea9 154 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 154 36.104 T 28-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 CO704_RS17345 15d3c6a9a571cd52293d6944acea93f7 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 16 455 3.6E-109 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS17345 15d3c6a9a571cd52293d6944acea93f7 458 PIRSF PIRSF002746 9 458 8.2E-144 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS17345 15d3c6a9a571cd52293d6944acea93f7 458 Pfam PF02447 GntP family permease 16 456 6.1E-121 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 Pfam PF05746 DALR anticodon binding domain 582 679 1.4E-7 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 6.3E-214 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 Gene3D G3DSA:1.10.730.10 574 684 2.6E-10 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.913 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 SUPERFAMILY SSF109604 339 538 6.59E-17 T 28-03-2018 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 4.2E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.2E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 4.2E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 4.2E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24380 e4bce8f34a363bf47eea150f229129c7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.2E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS15390 f0e9f25505bdd7d05a2477b44674b33a 172 Gene3D G3DSA:3.10.129.10 1 172 6.6E-51 T 28-03-2018 CO704_RS15390 f0e9f25505bdd7d05a2477b44674b33a 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.7E-97 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS15390 f0e9f25505bdd7d05a2477b44674b33a 172 SUPERFAMILY SSF54637 3 169 1.76E-56 T 28-03-2018 IPR029069 HotDog domain CO704_RS15390 f0e9f25505bdd7d05a2477b44674b33a 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 52.014 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS15390 f0e9f25505bdd7d05a2477b44674b33a 172 Pfam PF07977 FabA-like domain 29 158 4.5E-54 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS02925 c7eb2130a2dadf112fe6e6eb136a6134 332 SUPERFAMILY SSF53686 10 321 1.13E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS02925 c7eb2130a2dadf112fe6e6eb136a6134 332 Gene3D G3DSA:3.40.50.1100 113 329 1.1E-50 T 28-03-2018 CO704_RS02925 c7eb2130a2dadf112fe6e6eb136a6134 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 2.0E-79 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS02925 c7eb2130a2dadf112fe6e6eb136a6134 332 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 4.0E-115 T 28-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CO704_RS02925 c7eb2130a2dadf112fe6e6eb136a6134 332 Gene3D G3DSA:3.40.50.1100 57 112 1.1E-20 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Gene3D G3DSA:3.30.420.40 1 116 5.6E-22 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Gene3D G3DSA:3.30.420.40 117 213 3.3E-17 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 PIRSF PIRSF000538 3 116 9.8E-18 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 PIRSF PIRSF000538 110 472 4.2E-54 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 SUPERFAMILY SSF53067 4 216 4.35E-38 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Gene3D G3DSA:3.30.420.40 214 469 5.9E-44 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 122 216 3.0E-8 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 110 1.0E-12 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 SUPERFAMILY SSF53067 218 463 9.42E-44 T 28-03-2018 CO704_RS03590 99c65f020a54430bc8e90df6762dbc4e 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 225 418 1.0E-23 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 SMART SM00065 18 164 2.3E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 Gene3D G3DSA:3.30.70.270 175 340 5.2E-41 T 28-03-2018 CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 335 7.8E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 SUPERFAMILY SSF55073 179 337 1.57E-33 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 Gene3D G3DSA:3.30.450.40 2 174 1.7E-21 T 28-03-2018 IPR029016 GAF domain-like CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 SUPERFAMILY SSF55781 20 164 7.46E-18 T 28-03-2018 IPR029016 GAF domain-like CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 339 1.1E-32 T 28-03-2018 IPR000160 GGDEF domain CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 SMART SM00267 163 340 3.0E-34 T 28-03-2018 IPR000160 GGDEF domain CO704_RS18565 fb3d003f1e5a13ca5984d9494e788efb 340 Pfam PF13492 GAF domain 19 156 6.1E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 CO704_RS12700 d5030bf8e15c24c47685c4cc2c39115c 124 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.6E-25 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS12700 d5030bf8e15c24c47685c4cc2c39115c 124 SUPERFAMILY SSF103481 7 106 2.09E-17 T 28-03-2018 CO704_RS10290 b554128dd7f5bc32d9861a886bbf007e 452 SUPERFAMILY SSF103473 21 415 4.45E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10290 b554128dd7f5bc32d9861a886bbf007e 452 Pfam PF13347 MFS/sugar transport protein 21 434 1.1E-87 T 28-03-2018 CO704_RS10290 b554128dd7f5bc32d9861a886bbf007e 452 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 445 2.3E-108 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CO704_RS10290 b554128dd7f5bc32d9861a886bbf007e 452 Gene3D G3DSA:1.20.1250.20 20 221 2.6E-16 T 28-03-2018 CO704_RS10290 b554128dd7f5bc32d9861a886bbf007e 452 Gene3D G3DSA:1.20.1250.20 222 438 1.7E-17 T 28-03-2018 CO704_RS16265 7e37fe1adea89b4b19f833b1846da598 287 SUPERFAMILY SSF49482 2 285 4.19E-86 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CO704_RS16265 7e37fe1adea89b4b19f833b1846da598 287 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 129 157 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CO704_RS16265 7e37fe1adea89b4b19f833b1846da598 287 Pfam PF00775 Dioxygenase 100 284 9.2E-44 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CO704_RS16265 7e37fe1adea89b4b19f833b1846da598 287 Gene3D G3DSA:2.60.130.10 2 286 1.5E-78 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CO704_RS16265 7e37fe1adea89b4b19f833b1846da598 287 Pfam PF04444 Catechol dioxygenase N terminus 22 94 4.6E-29 T 28-03-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 CO704_RS00040 b6f61972f2d25248e0ee2a0d39cb65c8 203 Gene3D G3DSA:2.40.50.140 21 117 2.8E-7 T 28-03-2018 CO704_RS09000 c424c1437696292a28d261623c726e3e 498 Gene3D G3DSA:3.30.750.24 403 495 1.4E-14 T 28-03-2018 IPR002645 STAS domain CO704_RS09000 c424c1437696292a28d261623c726e3e 498 SUPERFAMILY SSF52091 413 488 1.65E-10 T 28-03-2018 IPR002645 STAS domain CO704_RS09000 c424c1437696292a28d261623c726e3e 498 Pfam PF01740 STAS domain 417 486 1.4E-7 T 28-03-2018 IPR002645 STAS domain CO704_RS09000 c424c1437696292a28d261623c726e3e 498 Pfam PF00916 Sulfate permease family 177 347 1.6E-23 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CO704_RS09000 c424c1437696292a28d261623c726e3e 498 Pfam PF00916 Sulfate permease family 29 156 1.5E-15 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 Pfam PF03466 LysR substrate binding domain 89 282 2.2E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 Gene3D G3DSA:3.40.190.10 178 268 7.1E-17 T 28-03-2018 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 SUPERFAMILY SSF53850 91 295 1.15E-34 T 28-03-2018 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 Gene3D G3DSA:3.40.190.10 88 177 3.9E-20 T 28-03-2018 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 Gene3D G3DSA:1.10.10.10 1 84 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 SUPERFAMILY SSF46785 1 109 1.25E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS20380 b1b173b7cbfc582de0a2d9a2f6cfc2ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13860 36a5ef66f54a03920199bc79e2d0de12 178 Pfam PF14002 YniB-like protein 15 177 2.0E-76 T 28-03-2018 IPR025229 YniB-like protein CO704_RS13860 36a5ef66f54a03920199bc79e2d0de12 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 4.0E-62 T 28-03-2018 CO704_RS20875 c452daf4e522de9f918fa1cdb347d358 289 SUPERFAMILY SSF51658 21 278 4.32E-54 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS20875 c452daf4e522de9f918fa1cdb347d358 289 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 5 280 4.3E-142 T 28-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CO704_RS20875 c452daf4e522de9f918fa1cdb347d358 289 Pfam PF01261 Xylose isomerase-like TIM barrel 26 229 8.1E-32 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS20875 c452daf4e522de9f918fa1cdb347d358 289 Gene3D G3DSA:3.20.20.150 1 283 5.1E-56 T 28-03-2018 CO704_RS17495 3b45cf45a2eb6c68d745d477c102a284 90 SUPERFAMILY SSF101498 21 88 2.62E-7 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CO704_RS17495 3b45cf45a2eb6c68d745d477c102a284 90 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 88 5.2E-11 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CO704_RS17495 3b45cf45a2eb6c68d745d477c102a284 90 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 82 1.7E-5 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 Gene3D G3DSA:3.30.70.100 180 273 3.8E-29 T 28-03-2018 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 SUPERFAMILY SSF82861 27 112 7.19E-18 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 SUPERFAMILY SSF50182 114 179 7.85E-17 T 28-03-2018 IPR010920 LSM domain CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 Gene3D G3DSA:2.30.30.60 129 179 4.9E-15 T 28-03-2018 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 SUPERFAMILY SSF82689 181 278 2.35E-33 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 Pfam PF00924 Mechanosensitive ion channel 72 268 1.5E-58 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS02945 5f84bab68f68d46c4945986fe38ba47a 286 Pfam PF05552 Conserved TM helix 16 64 3.1E-14 T 28-03-2018 IPR008910 Conserved TM helix CO704_RS15000 374163a68bdc78150d7876a9fd59169b 311 Pfam PF00892 EamA-like transporter family 156 285 1.0E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS15000 374163a68bdc78150d7876a9fd59169b 311 Pfam PF00892 EamA-like transporter family 17 143 1.2E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS15000 374163a68bdc78150d7876a9fd59169b 311 SUPERFAMILY SSF103481 192 286 2.35E-9 T 28-03-2018 CO704_RS15000 374163a68bdc78150d7876a9fd59169b 311 SUPERFAMILY SSF103481 49 147 3.92E-11 T 28-03-2018 CO704_RS17920 2bcb6e61111e7d9a3c6bb2dd266ce778 435 Pfam PF13657 HipA N-terminal domain 7 117 1.2E-20 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CO704_RS17920 2bcb6e61111e7d9a3c6bb2dd266ce778 435 Pfam PF07804 HipA-like C-terminal domain 168 410 5.6E-46 T 28-03-2018 IPR012893 HipA-like, C-terminal CO704_RS19145 81081e6085eba8048e37f894215946b3 188 SUPERFAMILY SSF56784 3 185 2.07E-51 T 28-03-2018 IPR023214 HAD-like domain CO704_RS19145 81081e6085eba8048e37f894215946b3 188 Gene3D G3DSA:3.40.50.1000 4 188 2.0E-30 T 28-03-2018 IPR023214 HAD-like domain CO704_RS19145 81081e6085eba8048e37f894215946b3 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 149 7.3E-38 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CO704_RS19145 81081e6085eba8048e37f894215946b3 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 7.1E-92 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CO704_RS19145 81081e6085eba8048e37f894215946b3 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 147 9.1E-35 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CO704_RS19145 81081e6085eba8048e37f894215946b3 188 PIRSF PIRSF004682 1 188 1.9E-68 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CO704_RS19145 81081e6085eba8048e37f894215946b3 188 Pfam PF13242 HAD-hyrolase-like 109 179 1.6E-10 T 28-03-2018 CO704_RS16395 6fcca8e1a881b4b1da9cf497a8cd07db 379 Gene3D G3DSA:3.40.1710.10 47 198 1.1E-24 T 28-03-2018 CO704_RS16395 6fcca8e1a881b4b1da9cf497a8cd07db 379 Pfam PF12698 ABC-2 family transporter protein 31 371 2.8E-40 T 28-03-2018 CO704_RS22145 516b7a46c53ec00e2179e74ac4af7711 515 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 91 511 7.5E-169 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CO704_RS22145 516b7a46c53ec00e2179e74ac4af7711 515 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 47 511 7.2E-203 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.66 T 28-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 SUPERFAMILY SSF46785 2 131 7.21E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 6.3E-36 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 Pfam PF02082 Transcriptional regulator 2 82 4.0E-24 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS20940 211494a13ee36d9e6261178c6fcc9e74 141 Gene3D G3DSA:1.10.10.10 1 136 4.0E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11740 0596f4999266cfcd6d93b27f2b6908cc 314 SUPERFAMILY SSF161098 93 292 2.49E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11740 0596f4999266cfcd6d93b27f2b6908cc 314 Gene3D G3DSA:1.10.3720.10 1 296 3.4E-29 T 28-03-2018 CO704_RS11740 0596f4999266cfcd6d93b27f2b6908cc 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 4.6E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 9.2E-107 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 SUPERFAMILY SSF102114 23 216 9.42E-24 T 28-03-2018 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 1.7E-17 T 28-03-2018 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 Gene3D G3DSA:3.80.30.10 68 246 3.2E-40 T 28-03-2018 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 PIRSF PIRSF000371 44 246 3.7E-47 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 PIRSF PIRSF000371 1 47 3.7E-10 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CO704_RS15620 7660487843e06c743e31cc617c2aed1c 246 Pfam PF04055 Radical SAM superfamily 24 178 1.7E-31 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS06130 75f9c3efb57dce82f358aaf84043fcc3 396 Gene3D G3DSA:1.20.1250.20 202 388 5.9E-8 T 28-03-2018 CO704_RS06130 75f9c3efb57dce82f358aaf84043fcc3 396 SUPERFAMILY SSF103473 8 384 2.35E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06130 75f9c3efb57dce82f358aaf84043fcc3 396 Gene3D G3DSA:1.20.1250.20 1 201 1.9E-27 T 28-03-2018 CO704_RS06130 75f9c3efb57dce82f358aaf84043fcc3 396 Pfam PF07690 Major Facilitator Superfamily 21 202 3.6E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS05100 f91f977686b9386e263f51c242f4dbca 354 Pfam PF00005 ABC transporter 20 165 2.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05100 f91f977686b9386e263f51c242f4dbca 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05100 f91f977686b9386e263f51c242f4dbca 354 SMART SM00382 28 213 3.5E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05100 f91f977686b9386e263f51c242f4dbca 354 SUPERFAMILY SSF52540 1 241 1.09E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05100 f91f977686b9386e263f51c242f4dbca 354 Gene3D G3DSA:3.40.50.300 1 247 1.9E-71 T 28-03-2018 CO704_RS08075 c5bac497fce1059efe714999a528c46c 90 Gene3D G3DSA:1.10.287.1050 10 72 1.2E-15 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CO704_RS08075 c5bac497fce1059efe714999a528c46c 90 SUPERFAMILY SSF81273 16 63 2.94E-5 T 28-03-2018 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 Gene3D G3DSA:3.40.190.10 179 270 3.9E-25 T 28-03-2018 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 Gene3D G3DSA:1.10.10.10 1 85 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 Pfam PF03466 LysR substrate binding domain 88 295 6.9E-46 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 SUPERFAMILY SSF53850 89 295 2.79E-42 T 28-03-2018 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 SUPERFAMILY SSF46785 4 89 2.07E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12655 c56ea49f15aaf9fd26968cd09fb943f7 300 Gene3D G3DSA:3.40.190.10 90 178 5.8E-22 T 28-03-2018 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 SUPERFAMILY SSF55920 3 255 7.07E-93 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 Gene3D G3DSA:3.90.230.10 1 262 8.4E-89 T 28-03-2018 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 Pfam PF00557 Metallopeptidase family M24 12 242 8.3E-55 T 28-03-2018 IPR000994 Peptidase M24 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.909 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 6.8E-110 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS19315 502cddbbca2342017e055ac1bf640d32 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CO704_RS25340 d3d4ed30eda843597984cb4641a5cc20 727 Gene3D G3DSA:2.120.10.30 7 190 1.6E-5 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CO704_RS25340 d3d4ed30eda843597984cb4641a5cc20 727 SUPERFAMILY SSF75011 85 369 2.48E-8 T 28-03-2018 CO704_RS25340 d3d4ed30eda843597984cb4641a5cc20 727 Gene3D G3DSA:2.130.10.10 191 400 2.4E-7 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS10660 d4398531f1176338f34db9ad09e4821e 353 Pfam PF11168 Protein of unknown function (DUF2955) 26 163 1.2E-35 T 28-03-2018 IPR022604 Protein of unknown function DUF2955 CO704_RS10660 d4398531f1176338f34db9ad09e4821e 353 Pfam PF13515 Fusaric acid resistance protein-like 204 332 3.2E-6 T 28-03-2018 CO704_RS10660 d4398531f1176338f34db9ad09e4821e 353 PIRSF PIRSF029594 18 353 1.8E-98 T 28-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 CO704_RS15505 50f1269ba04446034d6da94cbe4764ef 215 SMART SM00849 12 192 1.1E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15505 50f1269ba04446034d6da94cbe4764ef 215 SUPERFAMILY SSF56281 3 209 3.14E-60 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15505 50f1269ba04446034d6da94cbe4764ef 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.2E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS15505 50f1269ba04446034d6da94cbe4764ef 215 Gene3D G3DSA:3.60.15.10 1 214 1.1E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 SUPERFAMILY SSF55486 3 151 6.35E-50 T 28-03-2018 CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.0E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 Gene3D G3DSA:3.40.390.30 1 155 2.7E-55 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 5.6E-39 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CO704_RS17170 7283c588b9fc67b8a4278f6e83d8ce66 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.693 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 2.7E-107 T 28-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 Gene3D G3DSA:1.20.1560.10 1 303 2.7E-23 T 28-03-2018 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 Gene3D G3DSA:3.40.50.300 312 547 4.0E-41 T 28-03-2018 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 SMART SM00382 348 526 1.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 SUPERFAMILY SSF90123 7 299 7.46E-28 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 Pfam PF00005 ABC transporter 342 477 8.9E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06765 28441f6cb5cd7d3318f74e8ce65c4d13 548 SUPERFAMILY SSF52540 322 531 1.4E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03935 0772d8e81f906e23fa6b7838ea484f4e 392 Pfam PF07690 Major Facilitator Superfamily 18 191 2.2E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03935 0772d8e81f906e23fa6b7838ea484f4e 392 Pfam PF07690 Major Facilitator Superfamily 218 385 1.7E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03935 0772d8e81f906e23fa6b7838ea484f4e 392 Gene3D G3DSA:1.20.1250.20 198 392 1.8E-15 T 28-03-2018 CO704_RS03935 0772d8e81f906e23fa6b7838ea484f4e 392 SUPERFAMILY SSF103473 8 387 1.24E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03935 0772d8e81f906e23fa6b7838ea484f4e 392 Gene3D G3DSA:1.20.1250.20 4 196 8.8E-27 T 28-03-2018 CO704_RS15290 1b6a82842c82de088ca8be2a3d45f2be 636 Gene3D G3DSA:1.25.10.10 55 521 7.7E-5 T 28-03-2018 IPR011989 Armadillo-like helical CO704_RS11985 92d6cbaa415c4f501549ae7a887d02d9 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 41.193 T 28-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS11985 92d6cbaa415c4f501549ae7a887d02d9 252 SUPERFAMILY SSF53335 21 238 9.45E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS11985 92d6cbaa415c4f501549ae7a887d02d9 252 Pfam PF13847 Methyltransferase domain 33 148 5.0E-14 T 28-03-2018 IPR025714 Methyltransferase domain CO704_RS11985 92d6cbaa415c4f501549ae7a887d02d9 252 Gene3D G3DSA:3.40.50.150 2 177 5.7E-25 T 28-03-2018 CO704_RS11985 92d6cbaa415c4f501549ae7a887d02d9 252 Gene3D G3DSA:1.10.150.290 178 230 8.6E-28 T 28-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 Gene3D G3DSA:3.40.1160.10 2 241 8.7E-43 T 28-03-2018 CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 Pfam PF00696 Amino acid kinase family 10 219 3.9E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 5.5E-103 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 PIRSF PIRSF005650 4 241 3.9E-88 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.207 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CO704_RS19300 400f1ed3e11500939a45ac7e1837ec19 241 SUPERFAMILY SSF53633 7 240 3.14E-71 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CO704_RS25365 caba3f46c1e2bbe67a8dc26415e1c364 340 Gene3D G3DSA:1.10.340.30 81 235 1.5E-4 T 28-03-2018 CO704_RS25365 caba3f46c1e2bbe67a8dc26415e1c364 340 Pfam PF01548 Transposase 6 143 2.4E-15 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CO704_RS25365 caba3f46c1e2bbe67a8dc26415e1c364 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 2.6E-23 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 PIRSF PIRSF006444 1 435 3.2E-203 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 Gene3D G3DSA:3.40.50.980 6 96 0.41 T 28-03-2018 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 Gene3D G3DSA:3.30.300.30 327 436 5.5E-8 T 28-03-2018 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 12 433 7.5E-228 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 Pfam PF14535 AMP-binding enzyme C-terminal domain 337 433 1.5E-25 T 28-03-2018 IPR028154 AMP-dependent ligase, C-terminal CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 SUPERFAMILY SSF56801 20 387 8.63E-62 T 28-03-2018 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 Pfam PF00501 AMP-binding enzyme 79 290 4.3E-17 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS11770 c204645c7cb649acdeac03b5879559da 438 Gene3D G3DSA:3.40.50.980 97 259 1.1E-22 T 28-03-2018 CO704_RS18905 c10693d31a9612998bbbe328a93dbe23 89 Pfam PF13693 Winged helix-turn-helix DNA-binding 18 85 3.1E-28 T 28-03-2018 CO704_RS18905 c10693d31a9612998bbbe328a93dbe23 89 SUPERFAMILY SSF47413 14 81 1.86E-25 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS18905 c10693d31a9612998bbbe328a93dbe23 89 Gene3D G3DSA:1.10.260.40 11 84 2.8E-14 T 28-03-2018 CO704_RS09950 96fbe38ecfb71ccbecff8b07889166bf 208 Pfam PF11363 Protein of unknown function (DUF3164) 14 206 2.1E-76 T 28-03-2018 IPR021505 Bacteriophage B3, Orf6 CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 42 179 2.6E-23 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 Gene3D G3DSA:1.10.101.10 193 276 1.1E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 SUPERFAMILY SSF47090 198 273 3.3E-20 T 28-03-2018 IPR002477 Peptidoglycan binding-like CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 SUPERFAMILY SSF55846 24 194 4.32E-50 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 Gene3D G3DSA:3.40.80.10 42 192 1.4E-39 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS15790 ac1840f584c52930d52378bb71c440cb 276 SMART SM00644 32 178 1.0E-31 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS13680 972077dfa51c0523d971db7330c03b2a 136 Pfam PF03061 Thioesterase superfamily 50 127 2.4E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS13680 972077dfa51c0523d971db7330c03b2a 136 Gene3D G3DSA:3.10.129.10 1 136 3.5E-30 T 28-03-2018 CO704_RS13680 972077dfa51c0523d971db7330c03b2a 136 SUPERFAMILY SSF54637 1 135 1.92E-32 T 28-03-2018 IPR029069 HotDog domain CO704_RS13680 972077dfa51c0523d971db7330c03b2a 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 1.1E-44 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CO704_RS13680 972077dfa51c0523d971db7330c03b2a 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 42.542 T 28-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 3.9E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 Gene3D G3DSA:3.30.70.20 47 79 1.1E-13 T 28-03-2018 CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 SUPERFAMILY SSF54862 18 118 1.51E-22 T 28-03-2018 CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 Gene3D G3DSA:3.30.70.20 80 161 2.5E-7 T 28-03-2018 CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 Gene3D G3DSA:3.30.70.20 15 46 5.6E-7 T 28-03-2018 CO704_RS24265 33a7416abcbecdc82701657df41ce71f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS07660 5e424184ceea7f169b6f02ce3c6c8cf7 330 Gene3D G3DSA:3.30.1890.10 117 179 4.8E-10 T 28-03-2018 CO704_RS07660 5e424184ceea7f169b6f02ce3c6c8cf7 330 Gene3D G3DSA:3.30.1890.10 44 115 1.0E-9 T 28-03-2018 CO704_RS07660 5e424184ceea7f169b6f02ce3c6c8cf7 330 SUPERFAMILY SSF160355 55 296 4.84E-53 T 28-03-2018 CO704_RS07660 5e424184ceea7f169b6f02ce3c6c8cf7 330 Pfam PF02706 Chain length determinant protein 17 98 5.4E-18 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CO704_RS07660 5e424184ceea7f169b6f02ce3c6c8cf7 330 Gene3D G3DSA:1.10.287.210 180 273 6.9E-22 T 28-03-2018 CO704_RS22535 3f6356f1c380144cacff5dd6f127b2dd 234 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 8 231 2.4E-19 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CO704_RS22535 3f6356f1c380144cacff5dd6f127b2dd 234 SUPERFAMILY SSF53850 3 233 3.13E-35 T 28-03-2018 CO704_RS22535 3f6356f1c380144cacff5dd6f127b2dd 234 Pfam PF13531 Bacterial extracellular solute-binding protein 3 232 2.5E-39 T 28-03-2018 CO704_RS22535 3f6356f1c380144cacff5dd6f127b2dd 234 Gene3D G3DSA:3.40.190.10 104 234 5.5E-6 T 28-03-2018 CO704_RS22535 3f6356f1c380144cacff5dd6f127b2dd 234 Gene3D G3DSA:3.40.190.10 2 103 8.7E-12 T 28-03-2018 CO704_RS03265 d010d71a49f7326d0303137dc57bd4ea 453 Pfam PF00083 Sugar (and other) transporter 30 435 1.0E-51 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS03265 d010d71a49f7326d0303137dc57bd4ea 453 Gene3D G3DSA:1.20.1250.20 229 451 9.8E-27 T 28-03-2018 CO704_RS03265 d010d71a49f7326d0303137dc57bd4ea 453 SUPERFAMILY SSF103473 11 433 2.49E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03265 d010d71a49f7326d0303137dc57bd4ea 453 Gene3D G3DSA:1.20.1250.20 14 216 2.2E-32 T 28-03-2018 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 PIRSF PIRSF000538 5 504 8.2E-179 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 Gene3D G3DSA:3.30.420.40 251 504 3.1E-80 T 28-03-2018 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 SUPERFAMILY SSF53067 257 498 9.93E-87 T 28-03-2018 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 1.6E-61 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 Hamap MF_00186 Glycerol kinase [glpK]. 5 499 60.186 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 498 4.5E-231 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 SUPERFAMILY SSF53067 6 257 1.64E-96 T 28-03-2018 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 Gene3D G3DSA:3.30.420.40 1 250 1.5E-88 T 28-03-2018 CO704_RS23625 7019bc5fa6887e16a4f8830cec17bcde 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 8.9E-93 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CO704_RS12990 e5b3f64640d27d32f24bd85bd850195c 175 SUPERFAMILY SSF49401 28 175 3.33E-36 T 28-03-2018 IPR008966 Adhesion domain CO704_RS12990 e5b3f64640d27d32f24bd85bd850195c 175 Pfam PF00419 Fimbrial protein 29 174 1.3E-19 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS12990 e5b3f64640d27d32f24bd85bd850195c 175 Gene3D G3DSA:2.60.40.1090 27 175 1.8E-39 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 60 358 1.5E-91 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 Pfam PF02378 Phosphotransferase system, EIIC 10 346 1.6E-71 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 SUPERFAMILY SSF55604 451 524 1.96E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 Gene3D G3DSA:3.30.1360.60 448 524 4.8E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 Pfam PF00367 phosphotransferase system, EIIB 455 482 7.0E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 510 5.9E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS24790 b7dcd18153f3d0029c2c94b307e51adb 540 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 524 1.3E-268 T 28-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 CO704_RS18405 deaa9f6ee5d9aaffb465d26d9efe36d4 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.3E-161 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CO704_RS18405 deaa9f6ee5d9aaffb465d26d9efe36d4 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 2.3E-158 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CO704_RS00555 0e261a1ca5b38348af455b37b46401a1 426 Pfam PF11862 Domain of unknown function (DUF3382) 9 103 1.0E-22 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CO704_RS00555 0e261a1ca5b38348af455b37b46401a1 426 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 4.8E-61 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS00555 0e261a1ca5b38348af455b37b46401a1 426 Gene3D G3DSA:1.10.3470.10 4 402 3.4E-45 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS04295 ec5843280f99ce900f052ee5a34a1d73 61 Pfam PF07638 ECF sigma factor 15 56 1.9E-5 T 28-03-2018 IPR011517 RNA polymerase sigma-70 ECF-like CO704_RS04295 ec5843280f99ce900f052ee5a34a1d73 61 Gene3D G3DSA:1.10.10.60 13 56 5.5E-7 T 28-03-2018 CO704_RS01850 b3597b757a4670ef4303303abe1d3592 298 Pfam PF01136 Peptidase family U32 100 241 4.8E-11 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS20185 101f9b9eda6b474140c50208bd5c127c 354 SUPERFAMILY SSF55073 194 346 8.63E-45 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS20185 101f9b9eda6b474140c50208bd5c127c 354 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 347 1.1E-45 T 28-03-2018 IPR000160 GGDEF domain CO704_RS20185 101f9b9eda6b474140c50208bd5c127c 354 SMART SM00267 178 348 3.8E-57 T 28-03-2018 IPR000160 GGDEF domain CO704_RS20185 101f9b9eda6b474140c50208bd5c127c 354 Gene3D G3DSA:3.30.70.270 172 349 3.7E-50 T 28-03-2018 CO704_RS20185 101f9b9eda6b474140c50208bd5c127c 354 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 343 9.8E-46 T 28-03-2018 IPR000160 GGDEF domain CO704_RS08365 68b029f103ffb85d58951da2a6b3f325 89 Hamap MF_01549 Protein DsrB [dsrB]. 28 89 27.97 T 28-03-2018 IPR019717 Dextransucrase DSRB CO704_RS08365 68b029f103ffb85d58951da2a6b3f325 89 Pfam PF10781 Dextransucrase DSRB 28 87 8.8E-36 T 28-03-2018 IPR019717 Dextransucrase DSRB CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.7E-284 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 5.4E-95 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 5.8E-57 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 Pfam PF01578 Cytochrome C assembly protein 89 296 2.8E-52 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CO704_RS06210 d22ab87f97d7f49410e373b5af4086c7 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.9E-131 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CO704_RS05025 942660d56df18470cce3b7da4e7a54b6 73 Pfam PF07191 zinc-ribbons 4 68 3.1E-28 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 CO704_RS05025 942660d56df18470cce3b7da4e7a54b6 73 Gene3D G3DSA:2.10.290.10 1 71 2.0E-4 T 28-03-2018 CO704_RS05025 942660d56df18470cce3b7da4e7a54b6 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 69 5.0E-23 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 CO704_RS05025 942660d56df18470cce3b7da4e7a54b6 73 SUPERFAMILY SSF161187 2 69 1.83E-27 T 28-03-2018 IPR029037 YfgJ-like CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 SMART SM00283 277 524 8.8E-86 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 SUPERFAMILY SSF58104 255 525 6.67E-68 T 28-03-2018 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 492 9.3E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 Gene3D G3DSA:1.10.287.950 334 528 1.7E-45 T 28-03-2018 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 Gene3D G3DSA:1.10.287.950 58 333 6.3E-18 T 28-03-2018 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 176 1.8E-11 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 4.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 4.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 4.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 17 42 4.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20365 e58053a93aec72d6cc4b867b0a991855 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 4.1E-52 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 Pfam PF00202 Aminotransferase class-III 83 458 5.4E-101 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 Hamap MF_01276 Putrescine aminotransferase [patA]. 10 468 81.522 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 SUPERFAMILY SSF53383 83 458 1.02E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 PIRSF PIRSF000521 63 185 4.2E-5 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 PIRSF PIRSF000521 174 217 1.0 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 PIRSF PIRSF000521 222 461 1.3E-38 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 Gene3D G3DSA:3.40.640.10 100 348 2.3E-84 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 Gene3D G3DSA:3.90.1150.10 349 471 6.2E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS20585 f118ecf889d73018bec024cf67f9affc 474 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 17 458 1.0E-275 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 SMART SM00636 27 405 2.7E-71 T 28-03-2018 IPR011583 Chitinase II GO:0008061 CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 Gene3D G3DSA:3.20.20.80 8 424 5.9E-81 T 28-03-2018 CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 ProSitePatterns PS01095 Chitinases family 18 active site. 149 157 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 SUPERFAMILY SSF51445 25 280 1.65E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 SUPERFAMILY SSF51445 377 409 1.65E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS14040 bdd74ed69b11b5a0c5833ec73b5aadf8 424 Pfam PF00704 Glycosyl hydrolases family 18 30 405 5.2E-66 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CO704_RS13855 3c6c4bfadb1e4aceb30a88177d6ad5bf 286 SUPERFAMILY SSF56112 3 280 1.41E-37 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS13855 3c6c4bfadb1e4aceb30a88177d6ad5bf 286 Gene3D G3DSA:3.90.1200.10 94 279 6.3E-16 T 28-03-2018 CO704_RS13855 3c6c4bfadb1e4aceb30a88177d6ad5bf 286 PIRSF PIRSF006221 1 286 1.8E-94 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CO704_RS13855 3c6c4bfadb1e4aceb30a88177d6ad5bf 286 Pfam PF03881 Fructosamine kinase 1 285 2.0E-115 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CO704_RS13855 3c6c4bfadb1e4aceb30a88177d6ad5bf 286 Gene3D G3DSA:3.30.200.20 1 91 2.6E-19 T 28-03-2018 CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 Gene3D G3DSA:3.40.50.720 1 259 2.7E-57 T 28-03-2018 CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 9.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.3E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 SUPERFAMILY SSF51735 8 255 3.12E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 254 2.1E-42 T 28-03-2018 CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS00015 ed84432b30f79d505b78c617f1f0a2d5 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.5E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS08905 a3f0340352f55b78af04e6a9cf775a8e 331 SUPERFAMILY SSF81345 4 328 5.89E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS08905 a3f0340352f55b78af04e6a9cf775a8e 331 Gene3D G3DSA:1.10.3470.10 2 330 3.6E-67 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS08905 a3f0340352f55b78af04e6a9cf775a8e 331 Pfam PF01032 FecCD transport family 14 327 3.1E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS00425 7b5c2c00e55dae71e40f3cd130319936 349 Pfam PF01594 AI-2E family transporter 14 327 3.1E-76 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 7.1E-15 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 9.8E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 SUPERFAMILY SSF52833 1 79 1.83E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 Gene3D G3DSA:1.20.1050.10 98 199 1.3E-24 T 28-03-2018 CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 Gene3D G3DSA:3.40.30.10 1 97 1.4E-22 T 28-03-2018 CO704_RS13395 cd5d391c8ed20a57ecede099223f96d8 200 SUPERFAMILY SSF47616 83 198 6.55E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 Gene3D G3DSA:3.40.30.10 3 83 2.0E-27 T 28-03-2018 CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 Pfam PF00462 Glutaredoxin 4 63 2.7E-24 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 6.8E-37 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 SUPERFAMILY SSF52833 1 82 8.3E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 PRINTS PR00160 Glutaredoxin signature 4 22 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 PRINTS PR00160 Glutaredoxin signature 46 59 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 PRINTS PR00160 Glutaredoxin signature 60 73 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS23710 0eae3caf559ec14b82183d132e2d1483 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CO704_RS11335 252b055e965cffc5c3ca0e685a1e9efb 205 SUPERFAMILY SSF47616 81 201 9.95E-14 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS11335 252b055e965cffc5c3ca0e685a1e9efb 205 SUPERFAMILY SSF52833 2 80 6.28E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS11335 252b055e965cffc5c3ca0e685a1e9efb 205 Gene3D G3DSA:3.40.30.10 1 100 4.0E-13 T 28-03-2018 CO704_RS11335 252b055e965cffc5c3ca0e685a1e9efb 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 19 79 2.8E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS11335 252b055e965cffc5c3ca0e685a1e9efb 205 Gene3D G3DSA:1.20.1050.10 101 204 1.8E-9 T 28-03-2018 CO704_RS15930 0c5f3c9e102df64f2e038458c3c40910 146 Gene3D G3DSA:3.40.630.30 1 146 4.8E-28 T 28-03-2018 CO704_RS15930 0c5f3c9e102df64f2e038458c3c40910 146 SUPERFAMILY SSF55729 1 139 3.32E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS15930 0c5f3c9e102df64f2e038458c3c40910 146 Pfam PF13673 Acetyltransferase (GNAT) domain 48 129 5.0E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 SUPERFAMILY SSF54211 347 538 2.01E-34 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 Gene3D G3DSA:3.30.230.10 324 564 1.5E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 433 533 9.9E-11 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 430 449 3.3E-11 T 28-03-2018 CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 490 508 3.3E-11 T 28-03-2018 CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 460 479 3.3E-11 T 28-03-2018 CO704_RS15385 e6b5faaae628564165d4198cdf66205e 584 Pfam PF13654 AAA domain 119 300 7.2E-18 T 28-03-2018 CO704_RS20815 d3238a13b6d5c53a7fb3c0594f00da68 321 SUPERFAMILY SSF103481 43 143 4.45E-10 T 28-03-2018 CO704_RS20815 d3238a13b6d5c53a7fb3c0594f00da68 321 Pfam PF00892 EamA-like transporter family 158 306 1.7E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS20815 d3238a13b6d5c53a7fb3c0594f00da68 321 Pfam PF00892 EamA-like transporter family 3 122 5.5E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS15695 8e12463b3f6f51e406d4e2d62aed3829 231 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 2.6E-71 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CO704_RS15695 8e12463b3f6f51e406d4e2d62aed3829 231 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 214 4.6E-84 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CO704_RS15695 8e12463b3f6f51e406d4e2d62aed3829 231 SUPERFAMILY SSF55729 2 227 4.66E-93 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS15695 8e12463b3f6f51e406d4e2d62aed3829 231 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 231 98.286 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CO704_RS11730 4eb5751a797100a23470310a4f48e9e2 79 Pfam PF10829 Protein of unknown function (DUF2554) 11 79 6.7E-22 T 28-03-2018 IPR020117 Uncharacterised protein family YncJ CO704_RS11730 4eb5751a797100a23470310a4f48e9e2 79 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 16 74 5.0E-12 T 28-03-2018 IPR020117 Uncharacterised protein family YncJ CO704_RS03630 9b8a7358d280fa69323c73825b63e6d7 90 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 35 84 7.5E-5 T 28-03-2018 CO704_RS03630 9b8a7358d280fa69323c73825b63e6d7 90 PIRSF PIRSF036548 1 90 3.1E-27 T 28-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 CO704_RS03630 9b8a7358d280fa69323c73825b63e6d7 90 SUPERFAMILY SSF54862 35 74 1.31E-9 T 28-03-2018 CO704_RS03630 9b8a7358d280fa69323c73825b63e6d7 90 Gene3D G3DSA:3.30.70.20 33 80 3.9E-6 T 28-03-2018 CO704_RS00290 b338de8415f17592bd41e8b1eb246525 152 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 4 151 2.3E-57 T 28-03-2018 IPR010351 Protein of unknown function DUF943 CO704_RS16410 5aaea326940192e1564966a91d6a6be8 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 232 1.0E-58 T 28-03-2018 IPR006214 Bax inhibitor 1-related CO704_RS21185 acd3fe95f6a461c31ff366248f6c355f 246 Gene3D G3DSA:3.20.20.70 4 245 6.1E-121 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS21185 acd3fe95f6a461c31ff366248f6c355f 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 3.2E-124 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS21185 acd3fe95f6a461c31ff366248f6c355f 246 Pfam PF07071 KDGP aldolase 8 225 3.9E-113 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS21185 acd3fe95f6a461c31ff366248f6c355f 246 SUPERFAMILY SSF51569 53 205 3.42E-7 T 28-03-2018 CO704_RS14470 3fe896b28caf514428db1168355c9750 178 Pfam PF05433 Glycine zipper 2TM domain 73 113 7.5E-11 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CO704_RS25555 cab42e53a07ffccbf9305febc832198c 133 Gene3D G3DSA:1.10.10.450 3 56 1.2E-20 T 28-03-2018 CO704_RS25555 cab42e53a07ffccbf9305febc832198c 133 SUPERFAMILY SSF140581 71 131 2.48E-7 T 28-03-2018 CO704_RS25555 cab42e53a07ffccbf9305febc832198c 133 Pfam PF05261 TraM protein, DNA-binding 1 131 3.0E-27 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CO704_RS25555 cab42e53a07ffccbf9305febc832198c 133 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 129 3.0E-12 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CO704_RS25555 cab42e53a07ffccbf9305febc832198c 133 SUPERFAMILY SSF47729 2 56 4.47E-12 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 Pfam PF01595 Domain of unknown function DUF21 6 197 4.1E-38 T 28-03-2018 IPR002550 Domain of unknown function DUF21 CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 Pfam PF03471 Transporter associated domain 347 425 2.7E-22 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 SUPERFAMILY SSF54631 200 335 3.42E-21 T 28-03-2018 CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 SMART SM01091 346 426 2.2E-29 T 28-03-2018 IPR005170 Transporter-associated domain CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 Gene3D G3DSA:3.30.465.10 345 426 1.2E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 Gene3D G3DSA:3.10.580.10 193 344 2.6E-20 T 28-03-2018 CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 Pfam PF00571 CBS domain 285 333 0.0026 T 28-03-2018 IPR000644 CBS domain CO704_RS20775 1cd43eb3e6cea7c65e21ab2f27f1d0e7 445 SUPERFAMILY SSF56176 344 427 7.91E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 SMART SM00421 146 203 4.5E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 Gene3D G3DSA:1.10.10.10 127 213 6.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 SUPERFAMILY SSF52172 3 151 2.85E-32 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 SUPERFAMILY SSF46894 135 210 1.02E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-35 T 28-03-2018 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 SMART SM00448 2 115 3.5E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS08565 2c0427d1669199b4860c872cbce48e9a 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 3.7E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS22135 8821b9d4e7c8d9468a6a99886c968715 217 Pfam PF09850 Type VI secretion system protein DotU 10 203 8.0E-43 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS22135 8821b9d4e7c8d9468a6a99886c968715 217 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 207 4.0E-45 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 SUPERFAMILY SSF56925 27 169 3.66E-30 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 Pfam PF13505 Outer membrane protein beta-barrel domain 9 169 1.9E-22 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 161 169 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 6.5E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 157 168 6.5E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 130 151 6.5E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 83 106 6.5E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 Gene3D G3DSA:2.40.160.20 22 169 3.9E-20 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS15960 8de2bae1bf56c57925c2165f7b4cdb29 169 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CO704_RS22595 4d9fe3a50bd0d5ab86ec73bc4ee8f363 117 SUPERFAMILY SSF142906 1 115 1.83E-33 T 28-03-2018 CO704_RS22595 4d9fe3a50bd0d5ab86ec73bc4ee8f363 117 Pfam PF04237 YjbR 12 101 5.7E-18 T 28-03-2018 IPR007351 Uncharacterised protein YjbR CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.1E-40 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.1E-40 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.1E-40 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.1E-40 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 Gene3D G3DSA:1.20.5.1030 68 119 1.6E-18 T 28-03-2018 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS22970 58d80c6b8943c82bd112f53f01aa7b1e 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CO704_RS00470 9c3cfeb4ab7b4281cead372afdb0fcea 458 Pfam PF00367 phosphotransferase system, EIIB 11 44 2.9E-16 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS00470 9c3cfeb4ab7b4281cead372afdb0fcea 458 Pfam PF02378 Phosphotransferase system, EIIC 108 383 1.1E-24 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS00470 9c3cfeb4ab7b4281cead372afdb0fcea 458 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS00470 9c3cfeb4ab7b4281cead372afdb0fcea 458 SUPERFAMILY SSF55604 9 83 1.7E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS00470 9c3cfeb4ab7b4281cead372afdb0fcea 458 Gene3D G3DSA:3.30.1360.60 7 83 1.9E-28 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS03660 940810f7dbf89e0dd8c16c2623d84fcf 442 Pfam PF03573 outer membrane porin, OprD family 13 411 7.8E-16 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CO704_RS03660 940810f7dbf89e0dd8c16c2623d84fcf 442 Gene3D G3DSA:2.40.160.10 1 442 3.7E-66 T 28-03-2018 CO704_RS20805 1ee127307caf17f5090fe8c8d939a5b3 282 Pfam PF13460 NAD(P)H-binding 6 183 3.3E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS20805 1ee127307caf17f5090fe8c8d939a5b3 282 Gene3D G3DSA:3.40.50.720 1 63 1.7E-11 T 28-03-2018 CO704_RS20805 1ee127307caf17f5090fe8c8d939a5b3 282 Gene3D G3DSA:3.40.50.720 64 222 2.2E-10 T 28-03-2018 CO704_RS20805 1ee127307caf17f5090fe8c8d939a5b3 282 SUPERFAMILY SSF51735 2 250 1.17E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS08805 29e449fc16613110c3c37495ff38336d 249 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 39.685 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CO704_RS08805 29e449fc16613110c3c37495ff38336d 249 Pfam PF03932 CutC family 3 199 2.6E-77 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CO704_RS08805 29e449fc16613110c3c37495ff38336d 249 SUPERFAMILY SSF110395 3 242 4.45E-77 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CO704_RS08805 29e449fc16613110c3c37495ff38336d 249 Gene3D G3DSA:3.20.20.380 1 248 2.7E-92 T 28-03-2018 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 Pfam PF07883 Cupin domain 32 80 1.2E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 Gene3D G3DSA:2.60.120.10 5 144 5.8E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 SMART SM00342 188 271 2.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 Gene3D G3DSA:1.10.10.60 229 276 2.0E-10 T 28-03-2018 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 Pfam PF12833 Helix-turn-helix domain 196 272 3.4E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 SUPERFAMILY SSF51182 32 124 2.57E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 Gene3D G3DSA:1.10.10.60 178 228 4.7E-5 T 28-03-2018 CO704_RS14935 fe7ca891be5372a939733a58d9767556 278 SUPERFAMILY SSF46689 224 275 6.72E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS20835 eb161e6f7fb39cd4d42d9b1e668fefa0 206 Gene3D G3DSA:1.10.287.460 1 89 2.0E-19 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CO704_RS20835 eb161e6f7fb39cd4d42d9b1e668fefa0 206 Gene3D G3DSA:3.10.50.40 90 206 1.5E-40 T 28-03-2018 CO704_RS20835 eb161e6f7fb39cd4d42d9b1e668fefa0 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.1E-22 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CO704_RS20835 eb161e6f7fb39cd4d42d9b1e668fefa0 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 8.8E-27 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CO704_RS20835 eb161e6f7fb39cd4d42d9b1e668fefa0 206 SUPERFAMILY SSF54534 8 205 7.07E-56 T 28-03-2018 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 Pfam PF00083 Sugar (and other) transporter 16 460 3.3E-112 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 PRINTS PR00171 Sugar transporter signature 108 127 5.0E-21 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 PRINTS PR00171 Sugar transporter signature 363 384 5.0E-21 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 PRINTS PR00171 Sugar transporter signature 278 288 5.0E-21 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 PRINTS PR00171 Sugar transporter signature 24 34 5.0E-21 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 PRINTS PR00171 Sugar transporter signature 386 398 5.0E-21 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 Gene3D G3DSA:1.20.1250.20 241 472 8.7E-35 T 28-03-2018 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 SUPERFAMILY SSF103473 6 459 3.79E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 Gene3D G3DSA:1.20.1250.20 6 225 1.2E-37 T 28-03-2018 CO704_RS04865 8d16ebc8fb486bc56d1ab4b91dd79766 479 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 4 457 2.7E-109 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 Gene3D G3DSA:3.20.20.100 1 315 2.7E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 Pfam PF00248 Aldo/keto reductase family 15 307 3.2E-66 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 SUPERFAMILY SSF51430 1 313 6.29E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 PRINTS PR00069 Aldo-keto reductase signature 45 69 2.5E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 PRINTS PR00069 Aldo-keto reductase signature 142 159 2.5E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS03255 0ba5fed15e70ce8e243f2b8d410e589a 347 PRINTS PR00069 Aldo-keto reductase signature 111 129 2.5E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 SUPERFAMILY SSF56327 169 432 1.44E-88 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 Gene3D G3DSA:3.90.110.10 156 432 2.8E-92 T 28-03-2018 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 SUPERFAMILY SSF51735 1 166 1.36E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS13090 643a284715254a3e822139ccecb27b44 433 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 193 408 1.9E-50 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 Gene3D G3DSA:3.40.50.720 1 155 3.3E-25 T 28-03-2018 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 Pfam PF02056 Family 4 glycosyl hydrolase 2 183 2.9E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 189 201 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 163 174 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS13090 643a284715254a3e822139ccecb27b44 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 1.8E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CO704_RS02470 e4aa5b33d6d03282dad1b88c8ec45e19 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 86 7.2E-22 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CO704_RS02470 e4aa5b33d6d03282dad1b88c8ec45e19 105 SUPERFAMILY SSF54909 1 99 1.07E-27 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS02470 e4aa5b33d6d03282dad1b88c8ec45e19 105 Gene3D G3DSA:3.30.70.100 1 102 1.5E-19 T 28-03-2018 CO704_RS10730 0ac68f0a886706edec6d1b84f1686d24 232 Gene3D G3DSA:3.40.50.300 1 227 3.5E-55 T 28-03-2018 CO704_RS10730 0ac68f0a886706edec6d1b84f1686d24 232 SMART SM00382 26 211 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS10730 0ac68f0a886706edec6d1b84f1686d24 232 Pfam PF00005 ABC transporter 17 161 4.2E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS10730 0ac68f0a886706edec6d1b84f1686d24 232 SUPERFAMILY SSF52540 2 219 4.14E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS10730 0ac68f0a886706edec6d1b84f1686d24 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 5.1E-107 T 28-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 79 7.2E-33 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 Pfam PF01455 HupF/HypC family 1 66 1.7E-28 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 SUPERFAMILY SSF159127 1 81 6.02E-28 T 28-03-2018 CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 1.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 1.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS24225 93a9cf2fe7ec71aa78b6050457a4449a 86 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.5E-24 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 Gene3D G3DSA:1.10.10.10 132 197 2.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 SUPERFAMILY SSF46894 134 194 1.02E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 193 3.5E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 SMART SM00421 140 197 3.2E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 Pfam PF00072 Response regulator receiver domain 5 115 2.3E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 SUPERFAMILY SSF52172 4 154 1.57E-29 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 SMART SM00448 3 116 1.0E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 Gene3D G3DSA:3.40.50.2300 1 131 7.3E-24 T 28-03-2018 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 6.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 6.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS18670 a4202459002aeeffc9b644b2c2134799 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 6.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS23420 e750cc2f52e414e4205f7417f24b52e5 85 Pfam PF13710 ACT domain 13 73 6.0E-26 T 28-03-2018 CO704_RS23420 e750cc2f52e414e4205f7417f24b52e5 85 Gene3D G3DSA:3.30.70.260 1 79 3.8E-9 T 28-03-2018 CO704_RS23420 e750cc2f52e414e4205f7417f24b52e5 85 SUPERFAMILY SSF55021 3 75 4.0E-13 T 28-03-2018 CO704_RS00315 cbb7978c8e3b7ddf90973e58a267699a 297 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 25 296 6.4E-114 T 28-03-2018 IPR021266 Kdo hydroxylase CO704_RS22645 9be39f2e6b74b8ef1087768a8dc9b7b3 69 PIRSF PIRSF039008 1 66 1.3E-32 T 28-03-2018 IPR026042 Stress response protein YjbJ CO704_RS22645 9be39f2e6b74b8ef1087768a8dc9b7b3 69 SUPERFAMILY SSF69047 1 69 9.29E-28 T 28-03-2018 IPR008462 CsbD-like domain CO704_RS22645 9be39f2e6b74b8ef1087768a8dc9b7b3 69 Gene3D G3DSA:1.10.1470.10 1 69 1.9E-24 T 28-03-2018 IPR008462 CsbD-like domain CO704_RS22645 9be39f2e6b74b8ef1087768a8dc9b7b3 69 Pfam PF05532 CsbD-like 4 56 3.3E-23 T 28-03-2018 IPR008462 CsbD-like domain CO704_RS24980 8ef9f20fb3759e621da6920bb2243b46 186 Pfam PF16931 Putative phage holin 82 172 4.0E-19 T 28-03-2018 IPR032637 Putative phage holin-like CO704_RS08635 14f36d514a8c540f11f77a14c2744892 424 SUPERFAMILY SSF103473 11 398 5.1E-18 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS08635 14f36d514a8c540f11f77a14c2744892 424 Gene3D G3DSA:1.20.1250.20 221 396 5.4E-8 T 28-03-2018 CO704_RS08635 14f36d514a8c540f11f77a14c2744892 424 Gene3D G3DSA:1.20.1250.20 6 203 1.8E-8 T 28-03-2018 CO704_RS08900 d21cfa6b92495163f0285741f80277f3 585 Gene3D G3DSA:2.60.120.260 439 584 6.1E-43 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS08900 d21cfa6b92495163f0285741f80277f3 585 Gene3D G3DSA:3.40.30.10 239 436 3.2E-27 T 28-03-2018 CO704_RS08900 d21cfa6b92495163f0285741f80277f3 585 SUPERFAMILY SSF52833 270 408 2.04E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS08900 d21cfa6b92495163f0285741f80277f3 585 Pfam PF08534 Redoxin 285 395 1.4E-11 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CO704_RS08900 d21cfa6b92495163f0285741f80277f3 585 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 197 1.5E-11 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 Gene3D G3DSA:3.40.190.10 201 300 2.1E-15 T 28-03-2018 CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 Gene3D G3DSA:3.40.190.10 81 200 1.2E-37 T 28-03-2018 CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 SUPERFAMILY SSF46785 30 76 3.0E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 Gene3D G3DSA:1.10.10.10 6 80 4.6E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 SUPERFAMILY SSF53850 74 301 1.52E-82 T 28-03-2018 CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 Pfam PF14503 YhfZ C-terminal domain 75 301 8.8E-86 T 28-03-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain CO704_RS00870 6ba6bd03cf498433bbf180788f909bb0 301 Pfam PF14502 Helix-turn-helix domain 24 71 2.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09015 e72d60b3ae0de518be935e7a647e8da3 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 3.0E-32 T 28-03-2018 IPR009954 Protein of unknown function DUF1482 CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 Pfam PF00563 EAL domain 201 432 3.3E-41 T 28-03-2018 IPR001633 EAL domain CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 Gene3D G3DSA:3.20.20.450 197 450 3.2E-42 T 28-03-2018 IPR001633 EAL domain CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 SUPERFAMILY SSF46894 118 168 2.72E-5 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 SMART SM00052 195 437 3.8E-31 T 28-03-2018 IPR001633 EAL domain CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 Gene3D G3DSA:1.10.10.10 105 184 0.0018 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18725 c7a0a1663d4b6c1b849dc888711dc03a 455 SUPERFAMILY SSF141868 200 444 2.75E-43 T 28-03-2018 IPR001633 EAL domain CO704_RS18555 93d2e4fec5916962525b4be7de335c55 308 PIRSF PIRSF026649 2 305 2.5E-92 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS18555 93d2e4fec5916962525b4be7de335c55 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 3.4E-133 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CO704_RS18555 93d2e4fec5916962525b4be7de335c55 308 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 66.36 T 28-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 CO704_RS18555 93d2e4fec5916962525b4be7de335c55 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 49.044 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CO704_RS18555 93d2e4fec5916962525b4be7de335c55 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 297 2.4E-99 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CO704_RS14955 db9e504f1a20e718798b5b0a63259c2c 355 Pfam PF02562 PhoH-like protein 150 355 1.5E-76 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 CO704_RS14955 db9e504f1a20e718798b5b0a63259c2c 355 Gene3D G3DSA:3.40.50.300 146 355 2.3E-22 T 28-03-2018 CO704_RS14955 db9e504f1a20e718798b5b0a63259c2c 355 SUPERFAMILY SSF52540 149 330 9.81E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 Gene3D G3DSA:3.40.50.2300 1 118 1.6E-33 T 28-03-2018 CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 6.3E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 SMART SM00448 1 112 5.4E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 SUPERFAMILY SSF52172 1 172 8.68E-39 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 Gene3D G3DSA:1.10.10.10 119 223 1.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14285 77063d51b22e3b1cbf6b99ff63661101 223 SMART SM00862 145 220 1.7E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS12070 e57ec07d5d8706bb160811b45b530f78 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 3.3E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12070 e57ec07d5d8706bb160811b45b530f78 163 Gene3D G3DSA:2.30.110.20 1 163 7.5E-52 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12070 e57ec07d5d8706bb160811b45b530f78 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 158 6.5E-48 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12070 e57ec07d5d8706bb160811b45b530f78 163 SUPERFAMILY SSF141452 2 159 4.58E-44 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.744 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.9E-300 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 Gene3D G3DSA:1.10.10.10 537 629 0.0078 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 SUPERFAMILY SSF51905 97 261 3.84E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 SUPERFAMILY SSF51905 7 66 3.84E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 SMART SM01228 546 617 5.0E-45 T 28-03-2018 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 Gene3D G3DSA:3.50.50.60 5 264 1.3E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.8E-169 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 Pfam PF13932 GidA associated domain 403 616 3.8E-77 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CO704_RS24090 b2f3085b23e57efe2e97ac72860d684f 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 SUPERFAMILY SSF53850 21 326 1.38E-95 T 28-03-2018 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 3.8E-188 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 28-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 Pfam PF13531 Bacterial extracellular solute-binding protein 30 280 5.1E-47 T 28-03-2018 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 Gene3D G3DSA:3.40.190.10 126 246 8.2E-28 T 28-03-2018 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 Gene3D G3DSA:3.40.190.10 247 329 5.3E-28 T 28-03-2018 CO704_RS23660 466c7157c57e1f6498ecd15a96c883da 329 Gene3D G3DSA:3.40.190.10 20 125 6.0E-26 T 28-03-2018 CO704_RS15270 417ccaf83b5264348b8a6687dc7f60b8 90 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 18 67 1.2E-19 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CO704_RS15270 417ccaf83b5264348b8a6687dc7f60b8 90 Gene3D G3DSA:1.10.10.10 20 77 4.1E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 Pfam PF00085 Thioredoxin 5 106 2.4E-34 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 SUPERFAMILY SSF52833 2 108 2.0E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 28-03-2018 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 28-03-2018 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 28-03-2018 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 Gene3D G3DSA:3.40.30.10 1 109 3.0E-35 T 28-03-2018 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.7E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CO704_RS23360 d90258773068ae7507170ceea2e5e7e3 109 PIRSF PIRSF000077 2 108 2.0E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.5E-27 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 6.5E-27 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 6.5E-27 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 6.5E-27 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 6.5E-27 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 SUPERFAMILY SSF51905 1 322 7.5E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 69.069 T 28-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Gene3D G3DSA:3.40.50.720 171 334 1.3E-28 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Gene3D G3DSA:3.30.390.30 335 463 2.3E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.8E-50 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Gene3D G3DSA:3.50.50.60 3 164 4.3E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 7.3E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 PIRSF PIRSF000350 2 463 7.2E-69 T 28-03-2018 CO704_RS23505 54e14f833136d4afb569ba1065bdce6b 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 5.8E-30 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 Gene3D G3DSA:1.20.1250.20 3 194 8.6E-30 T 28-03-2018 CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 Gene3D G3DSA:1.20.1250.20 248 501 1.4E-26 T 28-03-2018 CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 SUPERFAMILY SSF103473 464 493 1.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 SUPERFAMILY SSF103473 4 191 1.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 SUPERFAMILY SSF103473 244 414 1.19E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS12715 12be86b6ea918babc0b54679a778d8cd 501 Pfam PF07690 Major Facilitator Superfamily 15 404 2.9E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 342 1.3E-16 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Pfam PF00175 Oxidoreductase NAD-binding domain 118 226 6.2E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Gene3D G3DSA:3.10.20.30 238 355 5.8E-30 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 SUPERFAMILY SSF54292 237 349 3.37E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 1.7E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 1.7E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 1.7E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 1.7E-5 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 351 2.0E-150 T 28-03-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 4.4E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 4.4E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 4.4E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 4.4E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Pfam PF00970 Oxidoreductase FAD-binding domain 9 105 9.9E-11 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 SUPERFAMILY SSF52343 94 242 2.75E-32 T 28-03-2018 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Gene3D G3DSA:2.40.30.10 1 94 2.1E-18 T 28-03-2018 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 SUPERFAMILY SSF63380 2 103 5.02E-22 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 299 307 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS11800 a7285a64bd0c5eebc38d39c0c6d06834 355 Gene3D G3DSA:3.40.50.80 95 237 1.1E-29 T 28-03-2018 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.306 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 SMART SM01409 8 61 4.4E-16 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 Pfam PF01192 RNA polymerase Rpb6 10 60 1.3E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 3.5E-30 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 Gene3D G3DSA:3.90.940.10 1 91 3.9E-28 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CO704_RS23870 e29ace2c00a46fdc2566d3af544d36fa 91 SUPERFAMILY SSF63562 1 79 4.36E-25 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CO704_RS03085 c1fbd0683e449b28c82176ec62147c6d 140 PIRSF PIRSF020653 1 138 1.7E-62 T 28-03-2018 IPR009883 Inner membrane protein YgfX CO704_RS03085 c1fbd0683e449b28c82176ec62147c6d 140 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 1.5E-50 T 28-03-2018 IPR009883 Inner membrane protein YgfX CO704_RS03085 c1fbd0683e449b28c82176ec62147c6d 140 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 32 132 1.0E-35 T 28-03-2018 IPR009883 Inner membrane protein YgfX CO704_RS06695 d6ddfa77a1db13376c9ac6cbc0d80f9a 354 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 346 1.6E-76 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CO704_RS06695 d6ddfa77a1db13376c9ac6cbc0d80f9a 354 Gene3D G3DSA:3.20.20.190 26 352 1.3E-65 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CO704_RS06695 d6ddfa77a1db13376c9ac6cbc0d80f9a 354 SUPERFAMILY SSF51695 28 352 6.54E-95 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CO704_RS14965 b4fe7a1c206edbe939d891ccf2761a66 428 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 414 6.2E-104 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CO704_RS14965 b4fe7a1c206edbe939d891ccf2761a66 428 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 7 427 2.2E-175 T 28-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 CO704_RS14965 b4fe7a1c206edbe939d891ccf2761a66 428 Pfam PF04261 Dyp-type peroxidase family 66 414 1.1E-116 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CO704_RS14965 b4fe7a1c206edbe939d891ccf2761a66 428 SUPERFAMILY SSF54909 59 421 5.9E-96 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.581 T 28-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 Gene3D G3DSA:3.20.20.70 1 242 3.0E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 PIRSF PIRSF006621 1 311 7.7E-79 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 Pfam PF01207 Dihydrouridine synthase (Dus) 5 281 1.1E-87 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CO704_RS16370 c223c148dc1347b08c47e90c84de15ff 311 SUPERFAMILY SSF51395 1 308 1.26E-70 T 28-03-2018 CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.74 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 Pfam PF01327 Polypeptide deformylase 4 152 3.6E-51 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.9E-38 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-38 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.9E-38 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.9E-38 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 Gene3D G3DSA:3.90.45.10 1 169 1.9E-61 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 7.1E-66 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 SUPERFAMILY SSF56420 2 164 3.66E-61 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS01265 a27dc7917cb1e416362d89f594aa4f83 169 PIRSF PIRSF004749 1 169 1.2E-55 T 28-03-2018 IPR023635 Peptide deformylase CO704_RS02525 8cc9a011aed82ff222890c4f7a32e176 290 SUPERFAMILY SSF161098 91 278 3.01E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02525 8cc9a011aed82ff222890c4f7a32e176 290 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 285 6.5E-84 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CO704_RS02525 8cc9a011aed82ff222890c4f7a32e176 290 Gene3D G3DSA:1.10.3720.10 23 290 4.3E-23 T 28-03-2018 CO704_RS02525 8cc9a011aed82ff222890c4f7a32e176 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 285 1.6E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PRINTS PR01009 Flagellar M-ring protein signature 150 164 2.3E-23 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.3E-23 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PRINTS PR01009 Flagellar M-ring protein signature 118 136 2.3E-23 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PRINTS PR01009 Flagellar M-ring protein signature 349 373 2.3E-23 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PRINTS PR01009 Flagellar M-ring protein signature 194 212 2.3E-23 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 20 549 1.8E-60 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 Pfam PF01514 Secretory protein of YscJ/FliF family 27 218 3.3E-58 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 Gene3D G3DSA:3.30.70.1530 49 109 2.5E-4 T 28-03-2018 CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 Pfam PF08345 Flagellar M-ring protein C-terminal 252 418 1.1E-31 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal CO704_RS17535 3e9701d9691e2697f5b83d14bf21163a 558 PIRSF PIRSF004862 1 551 8.7E-106 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 PIRSF PIRSF037565 1 374 1.8E-160 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 49.752 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 Gene3D G3DSA:3.40.50.150 183 377 6.9E-35 T 28-03-2018 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 Pfam PF05175 Methyltransferase small domain 198 370 1.5E-56 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CO704_RS20630 32ae2022dd9a21203edec98bb244d51b 378 SUPERFAMILY SSF53335 194 373 3.14E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.9E-54 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.462 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 Gene3D G3DSA:2.40.150.20 1 123 1.1E-52 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 SUPERFAMILY SSF50193 2 122 5.63E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 SMART SM01374 1 123 2.1E-85 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CO704_RS01145 7f04d99533e7b23fcd6dd5831ab1c2af 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.1E-59 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CO704_RS22850 a67e29debdc46f5eb12c76e6b264db7a 230 Pfam PF07356 Protein of unknown function (DUF1481) 41 226 1.2E-71 T 28-03-2018 IPR010858 Protein of unknown function DUF1481 CO704_RS11080 4c26d02e5901e158cca2f3958b768922 441 Gene3D G3DSA:3.20.20.80 73 420 1.8E-45 T 28-03-2018 CO704_RS11080 4c26d02e5901e158cca2f3958b768922 441 SUPERFAMILY SSF51445 86 389 2.53E-31 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS11080 4c26d02e5901e158cca2f3958b768922 441 Pfam PF02638 Glycosyl hydrolase-like 10 57 391 7.0E-124 T 28-03-2018 IPR003790 Glycosyl hydrolase-like 10 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 Gene3D G3DSA:1.10.10.10 3 84 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 Gene3D G3DSA:3.40.190.10 174 257 6.1E-21 T 28-03-2018 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 Gene3D G3DSA:3.40.190.10 88 173 2.9E-11 T 28-03-2018 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 SUPERFAMILY SSF46785 4 84 9.91E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 SUPERFAMILY SSF53850 90 291 2.35E-40 T 28-03-2018 CO704_RS00930 6c566c9a8e09693478a9a0bc7591f89d 296 Pfam PF03466 LysR substrate binding domain 89 288 8.7E-38 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS25175 8416b620746658c5c7681f77b7053621 448 SUPERFAMILY SSF53098 128 289 6.68E-21 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS25175 8416b620746658c5c7681f77b7053621 448 SUPERFAMILY SSF46689 8 111 4.3E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS25175 8416b620746658c5c7681f77b7053621 448 Gene3D G3DSA:3.30.420.10 120 319 3.0E-25 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS25175 8416b620746658c5c7681f77b7053621 448 Pfam PF00665 Integrase core domain 136 256 8.3E-8 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CO704_RS25175 8416b620746658c5c7681f77b7053621 448 Pfam PF13565 Homeodomain-like domain 37 108 2.2E-9 T 28-03-2018 CO704_RS17600 79f18e5ceff10ae59cb92a5fbf90fc03 70 Pfam PF13275 S4 domain 9 68 5.5E-25 T 28-03-2018 CO704_RS17600 79f18e5ceff10ae59cb92a5fbf90fc03 70 Gene3D G3DSA:3.10.290.10 1 69 2.4E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS17600 79f18e5ceff10ae59cb92a5fbf90fc03 70 SUPERFAMILY SSF55174 7 67 5.76E-20 T 28-03-2018 CO704_RS07800 18adbdef7c8dda0720c6539c4bed3071 222 Gene3D G3DSA:2.60.120.10 4 134 4.8E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS07800 18adbdef7c8dda0720c6539c4bed3071 222 SUPERFAMILY SSF51206 23 138 1.83E-15 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CO704_RS07800 18adbdef7c8dda0720c6539c4bed3071 222 Gene3D G3DSA:1.10.10.10 135 221 4.9E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07800 18adbdef7c8dda0720c6539c4bed3071 222 Pfam PF00027 Cyclic nucleotide-binding domain 28 114 2.2E-9 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CO704_RS14775 799329ae588b9ebd31cb114314326244 76 Pfam PF07119 Protein of unknown function (DUF1375) 8 70 5.8E-9 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 CO704_RS05075 512dc1fa22c732aefb32f9dcadb92ff1 205 Pfam PF01810 LysE type translocator 16 202 3.8E-35 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS05075 512dc1fa22c732aefb32f9dcadb92ff1 205 PIRSF PIRSF006324 1 205 1.3E-45 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS07080 3e016717a6eb69076e2217b9bf04495d 302 SUPERFAMILY SSF141523 173 229 4.84E-27 T 28-03-2018 CO704_RS07080 3e016717a6eb69076e2217b9bf04495d 302 SUPERFAMILY SSF141523 95 144 4.84E-27 T 28-03-2018 CO704_RS07080 3e016717a6eb69076e2217b9bf04495d 302 Gene3D G3DSA:3.10.350.10 36 85 2.1E-4 T 28-03-2018 CO704_RS07080 3e016717a6eb69076e2217b9bf04495d 302 Pfam PF03734 L,D-transpeptidase catalytic domain 97 227 4.4E-17 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS07080 3e016717a6eb69076e2217b9bf04495d 302 Gene3D G3DSA:2.40.440.10 90 229 2.0E-28 T 28-03-2018 CO704_RS09295 979bb6f1418a6a1a2144e895ef214aac 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CO704_RS09295 979bb6f1418a6a1a2144e895ef214aac 203 SUPERFAMILY SSF53955 5 199 2.06E-26 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS09295 979bb6f1418a6a1a2144e895ef214aac 203 Pfam PF01464 Transglycosylase SLT domain 47 168 6.0E-25 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS09295 979bb6f1418a6a1a2144e895ef214aac 203 Gene3D G3DSA:1.10.530.10 22 203 1.4E-25 T 28-03-2018 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 Pfam PF08402 TOBE domain 295 375 3.4E-21 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 SUPERFAMILY SSF52540 19 256 3.46E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 SUPERFAMILY SSF50331 253 375 1.22E-18 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 SMART SM00382 44 227 4.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 Gene3D G3DSA:3.40.50.300 16 289 4.4E-77 T 28-03-2018 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 Pfam PF00005 ABC transporter 36 177 6.7E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 Gene3D G3DSA:2.40.50.140 298 368 1.6E-7 T 28-03-2018 CO704_RS15865 4b4963b95a44c52cdf9dd9d492088f4f 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.5E-150 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 1.9E-50 T 28-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 PRINTS PR00160 Glutaredoxin signature 52 65 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 PRINTS PR00160 Glutaredoxin signature 3 21 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 PRINTS PR00160 Glutaredoxin signature 66 79 1.6E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 SUPERFAMILY SSF52833 4 81 2.04E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 Gene3D G3DSA:3.40.30.10 1 84 6.5E-21 T 28-03-2018 CO704_RS15900 c1862dd39de2d8787662c632c6004293 90 Pfam PF00462 Glutaredoxin 4 69 6.8E-16 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CO704_RS16915 8404b70fff15db4dc72fd3c09354a951 525 Pfam PF06074 Protein of unknown function (DUF935) 34 521 7.4E-155 T 28-03-2018 IPR009279 Protein of unknown function DUF935 CO704_RS17185 93d41989f0957d7aa5250742017fa781 326 SUPERFAMILY SSF53850 30 298 6.22E-65 T 28-03-2018 CO704_RS17185 93d41989f0957d7aa5250742017fa781 326 Gene3D G3DSA:3.40.190.10 194 326 4.2E-19 T 28-03-2018 CO704_RS17185 93d41989f0957d7aa5250742017fa781 326 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 295 2.2E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS17185 93d41989f0957d7aa5250742017fa781 326 Gene3D G3DSA:3.40.190.10 23 193 3.3E-34 T 28-03-2018 CO704_RS17185 93d41989f0957d7aa5250742017fa781 326 SMART SM00062 65 297 3.3E-69 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS10160 900fc812adbb4a2d315766454cfd78cc 177 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 10 174 3.2E-40 T 28-03-2018 IPR018755 Bacteriophage Mu-like, Gp48 CO704_RS12435 900fc812adbb4a2d315766454cfd78cc 177 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 10 174 3.2E-40 T 28-03-2018 IPR018755 Bacteriophage Mu-like, Gp48 CO704_RS17010 900fc812adbb4a2d315766454cfd78cc 177 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 10 174 3.2E-40 T 28-03-2018 IPR018755 Bacteriophage Mu-like, Gp48 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 Gene3D G3DSA:3.30.70.20 21 70 1.2E-6 T 28-03-2018 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 Gene3D G3DSA:3.30.70.20 104 170 4.8E-8 T 28-03-2018 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 SUPERFAMILY SSF54862 33 153 4.6E-29 T 28-03-2018 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 Gene3D G3DSA:3.30.70.20 71 103 3.6E-14 T 28-03-2018 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.3E-51 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 2.2E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS06580 aed9f5895d76d29a9b60b436a92c4347 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 163 26.953 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS03830 6c3f64d9a139819008d8e90afb8ca893 294 Gene3D G3DSA:1.10.3470.10 11 280 3.2E-19 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS03830 6c3f64d9a139819008d8e90afb8ca893 294 Pfam PF00950 ABC 3 transport family 13 272 2.0E-50 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CO704_RS03830 6c3f64d9a139819008d8e90afb8ca893 294 SUPERFAMILY SSF81345 10 269 8.5E-19 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS02930 201d10801c155953de719ef32707de11 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 1.9E-168 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS02930 201d10801c155953de719ef32707de11 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 53.888 T 28-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 CO704_RS02930 201d10801c155953de719ef32707de11 443 Pfam PF01490 Transmembrane amino acid transporter protein 25 441 4.4E-7 T 28-03-2018 IPR013057 Amino acid transporter, transmembrane domain CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 Gene3D G3DSA:1.10.4100.10 261 444 2.0E-32 T 28-03-2018 CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.6E-95 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 Gene3D G3DSA:3.30.1330.90 10 158 4.3E-51 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.3E-228 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 SUPERFAMILY SSF143548 16 158 1.41E-46 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CO704_RS09160 4ea30f803c06544cc6388c533e3d9f3c 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.7E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CO704_RS13070 2d40a97bf1082900a8ecb58a59105458 299 SUPERFAMILY SSF103481 35 137 1.83E-14 T 28-03-2018 CO704_RS13070 2d40a97bf1082900a8ecb58a59105458 299 SUPERFAMILY SSF103481 192 287 8.11E-9 T 28-03-2018 CO704_RS13070 2d40a97bf1082900a8ecb58a59105458 299 Pfam PF00892 EamA-like transporter family 3 134 1.3E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS13070 2d40a97bf1082900a8ecb58a59105458 299 Pfam PF00892 EamA-like transporter family 149 285 5.0E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 Gene3D G3DSA:3.40.50.10490 96 281 3.2E-25 T 28-03-2018 CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 SUPERFAMILY SSF46689 9 85 3.76E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 SUPERFAMILY SSF53697 107 272 1.11E-27 T 28-03-2018 CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 Gene3D G3DSA:1.10.10.10 4 88 2.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 1.7E-10 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS02600 dcdf7a729cc85aa022243088d85fcffb 283 Pfam PF01380 SIS domain 140 266 6.3E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS16525 e9e46096c27cf832d92ab0b282f57734 50 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 47 2.1E-31 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CO704_RS16525 e9e46096c27cf832d92ab0b282f57734 50 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.767 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CO704_RS06200 a2ef385a7796af4e8805aad049feedf0 70 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 8.5E-20 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CO704_RS06200 a2ef385a7796af4e8805aad049feedf0 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 9.8E-20 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CO704_RS06235 a9413c3c60fae129b566a05169e501da 337 SUPERFAMILY SSF117892 86 230 1.09E-12 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06235 a9413c3c60fae129b566a05169e501da 337 PIRSF PIRSF005651 29 334 9.7E-81 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CO704_RS06235 a9413c3c60fae129b566a05169e501da 337 SMART SM00244 51 225 3.4E-5 T 28-03-2018 IPR001107 Band 7 domain CO704_RS06235 a9413c3c60fae129b566a05169e501da 337 Gene3D G3DSA:3.40.1620.10 50 156 0.0091 T 28-03-2018 CO704_RS06235 a9413c3c60fae129b566a05169e501da 337 Pfam PF01145 SPFH domain / Band 7 family 55 241 1.8E-28 T 28-03-2018 IPR001107 Band 7 domain CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 SUPERFAMILY SSF51419 1 227 1.7E-79 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 3.1E-93 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 Gene3D G3DSA:3.20.20.10 1 234 3.1E-69 T 28-03-2018 IPR029066 PLP-binding barrel CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 PIRSF PIRSF004848 1 234 5.5E-73 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CO704_RS02785 9e7efefcb501a5b1a602cb0e75bdbc7e 234 Pfam PF01168 Alanine racemase, N-terminal domain 8 229 2.5E-28 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 2.0E-71 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 1.3E-64 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 Gene3D G3DSA:2.10.260.10 81 129 6.3E-4 T 28-03-2018 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 Gene3D G3DSA:2.10.260.10 3 39 0.018 T 28-03-2018 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 SUPERFAMILY SSF89447 1 135 1.47E-45 T 28-03-2018 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.937 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 137 1.7E-21 T 28-03-2018 IPR020603 MraZ domain CO704_RS19685 58e0786eb79aa27319de974dda0430c4 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.9E-23 T 28-03-2018 IPR020603 MraZ domain CO704_RS19785 825c7def2daad96a55e37229a04612f8 787 Pfam PF03968 OstA-like protein 54 194 3.7E-28 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CO704_RS19785 825c7def2daad96a55e37229a04612f8 787 Pfam PF04453 Organic solvent tolerance protein 311 702 4.6E-105 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CO704_RS19785 825c7def2daad96a55e37229a04612f8 787 Gene3D G3DSA:2.60.450.10 43 208 2.6E-15 T 28-03-2018 CO704_RS19785 825c7def2daad96a55e37229a04612f8 787 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 766 20.974 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CO704_RS08830 0721fb9e3abcbd093422b22b7f46efd2 272 SUPERFAMILY SSF117396 1 253 1.44E-61 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CO704_RS08830 0721fb9e3abcbd093422b22b7f46efd2 272 Gene3D G3DSA:3.20.20.410 1 272 1.3E-56 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CO704_RS08830 0721fb9e3abcbd093422b22b7f46efd2 272 Pfam PF01904 Protein of unknown function DUF72 21 248 6.5E-47 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CO704_RS11070 9640f33580538b110dea59c068831cdc 204 Gene3D G3DSA:3.20.19.10 1 174 2.6E-43 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS11070 9640f33580538b110dea59c068831cdc 204 Pfam PF00694 Aconitase C-terminal domain 1 123 3.2E-29 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CO704_RS11070 9640f33580538b110dea59c068831cdc 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 200 37.489 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CO704_RS11070 9640f33580538b110dea59c068831cdc 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 3.3E-58 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CO704_RS11070 9640f33580538b110dea59c068831cdc 204 SUPERFAMILY SSF52016 1 190 2.75E-52 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CO704_RS15125 53478f47e279966e6b9c600706438187 326 Gene3D G3DSA:3.40.50.2300 145 290 4.6E-23 T 28-03-2018 CO704_RS15125 53478f47e279966e6b9c600706438187 326 SUPERFAMILY SSF53822 32 305 2.2E-49 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS15125 53478f47e279966e6b9c600706438187 326 Pfam PF13407 Periplasmic binding protein domain 35 295 3.8E-47 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS15125 53478f47e279966e6b9c600706438187 326 Gene3D G3DSA:3.40.50.2300 16 144 5.7E-19 T 28-03-2018 CO704_RS22760 18c8fbbbf9df6acd8609093e5ed7b3db 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 5 90 5.0E-22 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD CO704_RS22760 18c8fbbbf9df6acd8609093e5ed7b3db 90 Pfam PF11656 YjbD family (DUF3811) 5 90 7.3E-38 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 Gene3D G3DSA:1.20.1250.20 9 207 3.2E-38 T 28-03-2018 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 6.9E-144 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 Pfam PF07690 Major Facilitator Superfamily 21 389 7.6E-59 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 22 405 3.1E-128 T 28-03-2018 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 Gene3D G3DSA:1.20.1250.20 217 426 4.9E-26 T 28-03-2018 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 PIRSF PIRSF002808 2 429 4.0E-35 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS24745 344786846e8c2b056b551506d981d5e8 430 SUPERFAMILY SSF103473 8 423 1.18E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02315 fcc975ca980f32668bd4e7063bc80253 483 Pfam PF02378 Phosphotransferase system, EIIC 128 410 1.4E-33 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS02315 fcc975ca980f32668bd4e7063bc80253 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS02315 fcc975ca980f32668bd4e7063bc80253 483 Pfam PF00367 phosphotransferase system, EIIB 11 42 9.9E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS02315 fcc975ca980f32668bd4e7063bc80253 483 Gene3D G3DSA:3.30.1360.60 7 83 8.7E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS02315 fcc975ca980f32668bd4e7063bc80253 483 SUPERFAMILY SSF55604 8 81 1.96E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 Gene3D G3DSA:3.40.50.2300 171 346 1.6E-20 T 28-03-2018 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 Pfam PF13458 Periplasmic binding protein 24 344 1.9E-56 T 28-03-2018 IPR028081 Leucine-binding protein domain CO704_RS00535 5bf048833197fa68049450566fbf8936 365 Gene3D G3DSA:3.40.50.2300 20 170 4.8E-37 T 28-03-2018 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 SUPERFAMILY SSF53822 22 357 1.14E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 275 288 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 252 270 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 325 340 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS00535 5bf048833197fa68049450566fbf8936 365 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 1.2E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CO704_RS20525 a4f3352ffdbd6788b91b2c9c163cd078 289 Gene3D G3DSA:3.90.850.10 23 284 1.4E-69 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS20525 a4f3352ffdbd6788b91b2c9c163cd078 289 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 275 7.7E-57 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS20525 a4f3352ffdbd6788b91b2c9c163cd078 289 SUPERFAMILY SSF56529 62 277 6.67E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 SUPERFAMILY SSF89360 18 111 5.89E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 9.5E-32 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 1.0E-17 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 Gene3D G3DSA:2.60.300.12 18 122 1.3E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CO704_RS13660 49f41af0e67650042de00fcfa9e97ade 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 1.0E-45 T 28-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 CO704_RS04005 3956ab3a2bc03a2052099db631336fab 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 91 1.0E-32 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 CO704_RS04005 3956ab3a2bc03a2052099db631336fab 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 93 8.5E-41 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 Gene3D G3DSA:3.40.50.1980 173 292 1.7E-36 T 28-03-2018 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 Gene3D G3DSA:3.40.50.1980 12 172 4.4E-48 T 28-03-2018 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 23 41 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 54 67 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 67 84 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 257 276 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 178 199 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00690 Adhesin family signature 231 249 6.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 SUPERFAMILY SSF53807 19 292 1.42E-84 T 28-03-2018 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 227 244 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 23 44 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 67 86 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 270 288 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 48 66 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 PRINTS PR00691 Adhesin B signature 178 195 4.4E-21 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CO704_RS03835 2ce65cba0fe56454f4a4162b37f46d39 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 1.9E-77 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 Gene3D G3DSA:3.40.190.10 136 275 7.7E-33 T 28-03-2018 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 Gene3D G3DSA:3.40.190.10 17 135 0.0035 T 28-03-2018 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 294 3.8E-20 T 28-03-2018 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 SUPERFAMILY SSF53850 22 323 1.27E-64 T 28-03-2018 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 7 327 5.7E-175 T 28-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CO704_RS19745 d05bcf1ba2e95c085ebcf9f79617401a 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 4.9E-146 T 28-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 CO704_RS20420 8487a50f2eb213283faf47b762647e0c 297 Pfam PF00480 ROK family 5 286 7.3E-45 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS20420 8487a50f2eb213283faf47b762647e0c 297 Gene3D G3DSA:3.30.420.40 114 293 5.0E-46 T 28-03-2018 CO704_RS20420 8487a50f2eb213283faf47b762647e0c 297 SUPERFAMILY SSF53067 1 290 6.87E-56 T 28-03-2018 CO704_RS20420 8487a50f2eb213283faf47b762647e0c 297 Gene3D G3DSA:3.30.420.40 2 113 6.3E-23 T 28-03-2018 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 7.8E-43 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.4E-22 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 9.0E-44 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 SUPERFAMILY SSF75471 1 94 3.01E-31 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 SMART SM01103 3 86 2.1E-40 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CO704_RS01755 146ac2ed382d3db8dd6a628c798e1f31 97 Gene3D G3DSA:3.30.110.60 2 97 1.0E-28 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CO704_RS20590 5a50df9edc02c1df445e6a049d6aad63 96 Gene3D G3DSA:3.30.70.100 2 91 7.7E-23 T 28-03-2018 CO704_RS20590 5a50df9edc02c1df445e6a049d6aad63 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 75 1.5E-18 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CO704_RS20590 5a50df9edc02c1df445e6a049d6aad63 96 SUPERFAMILY SSF54909 1 91 3.01E-25 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS20590 5a50df9edc02c1df445e6a049d6aad63 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.254 T 28-03-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 CO704_RS11645 7bbdd882ee52cb339ca2aeee01729399 379 Gene3D G3DSA:3.40.190.10 19 137 3.5E-6 T 28-03-2018 CO704_RS11645 7bbdd882ee52cb339ca2aeee01729399 379 Pfam PF13416 Bacterial extracellular solute-binding protein 46 327 1.2E-26 T 28-03-2018 CO704_RS11645 7bbdd882ee52cb339ca2aeee01729399 379 SUPERFAMILY SSF53850 20 343 4.35E-37 T 28-03-2018 CO704_RS11645 7bbdd882ee52cb339ca2aeee01729399 379 Gene3D G3DSA:3.40.190.10 144 320 1.2E-26 T 28-03-2018 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 Gene3D G3DSA:3.20.20.20 2 281 2.6E-109 T 28-03-2018 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.8E-103 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 SUPERFAMILY SSF51717 7 274 1.03E-105 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 Pfam PF00809 Pterin binding enzyme 18 257 7.2E-90 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS01770 22dd47c14235f9be63d69e4ccbe27d23 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CO704_RS21930 066bff560acef7a6922b9d652459408e 80 Pfam PF11660 Protein of unknown function (DUF3262) 3 79 7.5E-27 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 CO704_RS21930 066bff560acef7a6922b9d652459408e 80 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 80 2.5E-24 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 CO704_RS12185 43ea20727b8da98ac350cb96b77b6b86 1094 Pfam PF06761 Intracellular multiplication and human macrophage-killing 369 686 2.6E-72 T 28-03-2018 IPR009612 ImcF-related CO704_RS12185 43ea20727b8da98ac350cb96b77b6b86 1094 Pfam PF06744 Type VI secretion protein IcmF C-terminal 820 1017 7.2E-55 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CO704_RS06710 942e1bc4141f515028d896798683ca37 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.3E-119 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 Gene3D G3DSA:3.20.70.20 122 739 1.2E-146 T 28-03-2018 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 5.2E-12 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 5.0E-40 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 SUPERFAMILY SSF48168 10 221 1.57E-73 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.3E-179 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 Pfam PF03477 ATP cone domain 6 92 2.2E-15 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CO704_RS06710 942e1bc4141f515028d896798683ca37 761 SUPERFAMILY SSF51998 222 740 3.36E-168 T 28-03-2018 CO704_RS17655 68cea130cdff3ac068dd485fb1729b74 407 Gene3D G3DSA:3.60.15.10 125 393 3.2E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS17655 68cea130cdff3ac068dd485fb1729b74 407 SUPERFAMILY SSF56281 165 388 9.3E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 SUPERFAMILY SSF53067 1 300 7.41E-60 T 28-03-2018 CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 Gene3D G3DSA:3.30.420.40 1 111 2.4E-23 T 28-03-2018 CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 63.407 T 28-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 Pfam PF00480 ROK family 2 300 9.2E-72 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CO704_RS14385 e6e852d8743dca1e5bcb2d6a97474794 303 Gene3D G3DSA:3.30.420.40 112 303 2.0E-47 T 28-03-2018 CO704_RS02895 59754ec1d30d03c8bf3f020fa805f93d 252 Pfam PF01435 Peptidase family M48 72 245 3.3E-26 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CO704_RS02895 59754ec1d30d03c8bf3f020fa805f93d 252 Gene3D G3DSA:3.30.2010.10 59 147 8.9E-19 T 28-03-2018 CO704_RS02060 f6865e22e01f716a2384dca57e4f93a0 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.5E-116 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CO704_RS02060 f6865e22e01f716a2384dca57e4f93a0 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.6E-66 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CO704_RS18320 0fd32d128d9cead0ec3eabc366100f27 186 Gene3D G3DSA:2.60.40.1620 43 175 1.9E-56 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 CO704_RS18320 0fd32d128d9cead0ec3eabc366100f27 186 Pfam PF11622 Protein of unknown function (DUF3251) 20 180 1.4E-77 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 CO704_RS01900 ecf7f79ab9a6d9d19bcfef67e87d7865 117 Pfam PF01638 HxlR-like helix-turn-helix 24 111 9.3E-28 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CO704_RS01900 ecf7f79ab9a6d9d19bcfef67e87d7865 117 SUPERFAMILY SSF46785 17 114 2.65E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01900 ecf7f79ab9a6d9d19bcfef67e87d7865 117 Gene3D G3DSA:1.10.10.10 22 117 3.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 SUPERFAMILY SSF54211 230 485 1.06E-101 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 Gene3D G3DSA:3.30.565.10 29 222 2.9E-55 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 SUPERFAMILY SSF55874 4 213 9.56E-67 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 SUPERFAMILY SSF110942 510 623 5.75E-36 T 28-03-2018 CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 SMART SM00387 27 184 7.4E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.0E-64 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 5.1E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 PIRSF PIRSF002583 1 624 3.3E-221 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.205 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CO704_RS05420 0df5a33363581a0f14310099f6323aa7 624 Pfam PF00183 Hsp90 protein 211 622 3.6E-127 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CO704_RS04900 19de747d3b5c9059c87b5a49a35bb118 245 PIRSF PIRSF004808 1 244 5.4E-77 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS04900 19de747d3b5c9059c87b5a49a35bb118 245 Gene3D G3DSA:3.40.1280.10 1 164 1.4E-43 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS04900 19de747d3b5c9059c87b5a49a35bb118 245 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 1.9E-89 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CO704_RS04900 19de747d3b5c9059c87b5a49a35bb118 245 Pfam PF00588 SpoU rRNA Methylase family 5 154 5.3E-34 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS04900 19de747d3b5c9059c87b5a49a35bb118 245 SUPERFAMILY SSF75217 4 164 6.08E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS18005 39e41911da4495671b94856d19892b0f 98 SUPERFAMILY SSF55021 12 82 2.15E-15 T 28-03-2018 CO704_RS18005 39e41911da4495671b94856d19892b0f 98 Gene3D G3DSA:3.30.70.260 2 98 2.8E-19 T 28-03-2018 CO704_RS18005 39e41911da4495671b94856d19892b0f 98 Pfam PF13710 ACT domain 20 80 1.3E-9 T 28-03-2018 CO704_RS18005 39e41911da4495671b94856d19892b0f 98 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 17 80 2.0E-14 T 28-03-2018 CO704_RS21180 24ae4f0a909b2c645b239cdb7c756831 383 Pfam PF10282 Lactonase, 7-bladed beta-propeller 26 379 3.3E-105 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CO704_RS21180 24ae4f0a909b2c645b239cdb7c756831 383 Gene3D G3DSA:2.130.10.10 274 382 7.7E-18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS21180 24ae4f0a909b2c645b239cdb7c756831 383 Gene3D G3DSA:2.130.10.10 159 273 1.9E-10 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS21180 24ae4f0a909b2c645b239cdb7c756831 383 Gene3D G3DSA:2.130.10.10 15 158 6.2E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS21180 24ae4f0a909b2c645b239cdb7c756831 383 SUPERFAMILY SSF51004 41 379 4.18E-40 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 PRINTS PR00969 Pili chaperone signature 122 137 1.3E-38 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 PRINTS PR00969 Pili chaperone signature 24 33 1.3E-38 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 PRINTS PR00969 Pili chaperone signature 158 173 1.3E-38 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 PRINTS PR00969 Pili chaperone signature 97 114 1.3E-38 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 PRINTS PR00969 Pili chaperone signature 69 90 1.3E-38 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 141 1.2E-44 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 Gene3D G3DSA:2.60.40.10 143 227 8.0E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 SUPERFAMILY SSF49354 19 140 7.06E-43 T 28-03-2018 IPR008962 PapD-like CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 Gene3D G3DSA:2.60.40.10 23 141 6.1E-40 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 1.1E-15 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS12985 d09fffcc2a4c20e190ef01db457dfd65 227 SUPERFAMILY SSF49584 144 219 1.7E-21 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CO704_RS19460 828d192a0d2c0b8e27f86c1520007721 143 Pfam PF03610 PTS system fructose IIA component 3 114 9.4E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS19460 828d192a0d2c0b8e27f86c1520007721 143 SUPERFAMILY SSF53062 1 126 2.09E-28 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS19460 828d192a0d2c0b8e27f86c1520007721 143 Gene3D G3DSA:3.40.50.510 1 136 5.2E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CO704_RS07325 378ff5c68851826e5843b7c6f80466d7 430 Gene3D G3DSA:1.20.1250.20 206 415 6.4E-21 T 28-03-2018 CO704_RS07325 378ff5c68851826e5843b7c6f80466d7 430 Gene3D G3DSA:1.20.1250.20 4 198 2.5E-15 T 28-03-2018 CO704_RS07325 378ff5c68851826e5843b7c6f80466d7 430 TIGRFAM TIGR00889 2A0110: nucleoside transporter 9 413 2.1E-177 T 28-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CO704_RS07325 378ff5c68851826e5843b7c6f80466d7 430 Pfam PF03825 Nucleoside H+ symporter 9 410 2.4E-169 T 28-03-2018 CO704_RS07325 378ff5c68851826e5843b7c6f80466d7 430 SUPERFAMILY SSF103473 7 410 7.59E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 SUPERFAMILY SSF51735 113 274 1.78E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 Gene3D G3DSA:3.40.50.720 138 293 1.5E-27 T 28-03-2018 CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 Gene3D G3DSA:3.90.180.10 3 137 8.5E-33 T 28-03-2018 CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 SMART SM00829 11 325 4.5E-26 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 6.4E-29 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 SUPERFAMILY SSF50129 5 142 1.42E-33 T 28-03-2018 IPR011032 GroES-like CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CO704_RS22620 ce8e8e53086063a2072b1e930692e38c 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 9.7E-11 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CO704_RS05305 c231ab86d2b4e041fd7be74982d82ed8 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05305 c231ab86d2b4e041fd7be74982d82ed8 263 Gene3D G3DSA:3.40.50.300 1 254 5.2E-73 T 28-03-2018 CO704_RS05305 c231ab86d2b4e041fd7be74982d82ed8 263 SUPERFAMILY SSF52540 1 234 9.23E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05305 c231ab86d2b4e041fd7be74982d82ed8 263 Pfam PF00005 ABC transporter 19 167 9.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05305 c231ab86d2b4e041fd7be74982d82ed8 263 SMART SM00382 28 224 4.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS18305 266b440a58ba4ff456c7a52a3e83ef28 156 SUPERFAMILY SSF52121 5 154 3.79E-59 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS18305 266b440a58ba4ff456c7a52a3e83ef28 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.2E-58 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS18305 266b440a58ba4ff456c7a52a3e83ef28 156 Gene3D G3DSA:3.40.50.960 1 155 1.2E-64 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS18305 266b440a58ba4ff456c7a52a3e83ef28 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.6E-56 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS18305 266b440a58ba4ff456c7a52a3e83ef28 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.675 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CO704_RS15730 493b80a2cd76bb4b7ddacb7e6718ac25 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 362 1.7E-55 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS15730 493b80a2cd76bb4b7ddacb7e6718ac25 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 6.4E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS15730 493b80a2cd76bb4b7ddacb7e6718ac25 371 Gene3D G3DSA:1.20.1600.10 26 303 5.3E-33 T 28-03-2018 CO704_RS15730 493b80a2cd76bb4b7ddacb7e6718ac25 371 SUPERFAMILY SSF111369 52 301 3.92E-27 T 28-03-2018 CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 Gene3D G3DSA:3.40.50.720 1 235 4.0E-59 T 28-03-2018 CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 Pfam PF00106 short chain dehydrogenase 2 187 1.2E-55 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 SUPERFAMILY SSF51735 2 231 2.18E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.0E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS12035 46ecab148dfde46ccea92afce89522b4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.6E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS08910 494d2fd8980b6657c00b4db4377de287 251 SUPERFAMILY SSF53335 6 234 3.04E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS08910 494d2fd8980b6657c00b4db4377de287 251 Pfam PF13649 Methyltransferase domain 46 145 1.2E-13 T 28-03-2018 CO704_RS08910 494d2fd8980b6657c00b4db4377de287 251 Gene3D G3DSA:3.40.50.150 5 239 2.8E-30 T 28-03-2018 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 SUPERFAMILY SSF88659 110 173 1.57E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 173 4.5E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 Gene3D G3DSA:1.10.1740.10 17 92 1.8E-12 T 28-03-2018 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 SUPERFAMILY SSF88946 23 105 9.81E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 Pfam PF08281 Sigma-70, region 4 118 169 1.5E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 Pfam PF04542 Sigma-70 region 2 24 87 1.9E-7 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS20465 dc4c52a7b198823bef243738a04cb799 182 Gene3D G3DSA:1.10.10.10 102 181 1.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07670 1587afa76ebd805e1f681cb7a9d01fe0 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.2E-117 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CO704_RS07670 1587afa76ebd805e1f681cb7a9d01fe0 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.791 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CO704_RS07670 1587afa76ebd805e1f681cb7a9d01fe0 258 Gene3D G3DSA:3.20.20.70 4 252 1.6E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS07670 1587afa76ebd805e1f681cb7a9d01fe0 258 SUPERFAMILY SSF51366 1 257 2.2E-73 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS07670 1587afa76ebd805e1f681cb7a9d01fe0 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.3E-78 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 363 35.716 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 Pfam PF02119 Flagellar P-ring protein 22 362 2.6E-130 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 20 35 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS17450 ed4c4c51abca6daa1fd5e57d4b782b81 363 PRINTS PR01010 Flagellar P-ring protein signature 35 50 4.5E-72 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CO704_RS22630 7e58a8f66a51c50860bf04acc57f8835 435 Pfam PF13729 F plasmid transfer operon, TraF, protein 50 353 1.3E-82 T 28-03-2018 IPR032811 Putative conjugal transfer protein TraF-related CO704_RS22630 7e58a8f66a51c50860bf04acc57f8835 435 SUPERFAMILY SSF56925 258 405 2.43E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS22630 7e58a8f66a51c50860bf04acc57f8835 435 Gene3D G3DSA:2.40.160.60 25 428 5.7E-35 T 28-03-2018 CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 Gene3D G3DSA:3.30.200.20 1 112 5.5E-36 T 28-03-2018 CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 Gene3D G3DSA:3.90.1200.10 113 378 4.9E-11 T 28-03-2018 CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 Pfam PF01636 Phosphotransferase enzyme family 31 263 1.0E-9 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 SUPERFAMILY SSF56112 1 396 4.23E-90 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 PIRSF PIRSF031134 1 399 2.4E-161 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 205.5 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CO704_RS05205 c9e7b24213a57793a1f8b2b5a60ecfc7 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 32 395 9.6E-170 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CO704_RS06605 253e222f7d9830c9e12ce8fd47a5cdae 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 7.8E-88 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06605 253e222f7d9830c9e12ce8fd47a5cdae 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.843 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CO704_RS06605 253e222f7d9830c9e12ce8fd47a5cdae 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 4.5E-143 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CO704_RS04625 4406c7cc268e14a732fed3f074cb5e23 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.655 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CO704_RS04625 4406c7cc268e14a732fed3f074cb5e23 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 8.2E-106 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CO704_RS04625 4406c7cc268e14a732fed3f074cb5e23 243 Gene3D G3DSA:3.20.20.70 4 238 4.7E-107 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS04625 4406c7cc268e14a732fed3f074cb5e23 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 4.2E-111 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CO704_RS04625 4406c7cc268e14a732fed3f074cb5e23 243 SUPERFAMILY SSF63892 4 242 8.37E-103 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CO704_RS11450 09d48a3ec8158908b31421ec9247856c 191 SUPERFAMILY SSF46785 48 164 2.78E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11450 09d48a3ec8158908b31421ec9247856c 191 Gene3D G3DSA:1.10.10.10 30 132 3.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11450 09d48a3ec8158908b31421ec9247856c 191 Gene3D G3DSA:1.10.10.10 133 185 0.24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11450 09d48a3ec8158908b31421ec9247856c 191 Pfam PF03551 Transcriptional regulator PadR-like family 52 121 3.0E-16 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal CO704_RS00025 6e7bd6ab12c11b14be99d0d52f0e12b7 260 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 210 1.4E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CO704_RS00025 6e7bd6ab12c11b14be99d0d52f0e12b7 260 Gene3D G3DSA:3.60.21.10 6 251 2.0E-39 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS00025 6e7bd6ab12c11b14be99d0d52f0e12b7 260 SUPERFAMILY SSF56300 9 247 1.44E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS00025 6e7bd6ab12c11b14be99d0d52f0e12b7 260 PIRSF PIRSF000883 8 253 2.8E-56 T 28-03-2018 IPR011152 Phosphoesterase MJ0912 CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 2.7E-82 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 227 42.517 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 226 5.5E-72 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 SUPERFAMILY SSF53448 8 227 2.01E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS03700 af7217f7a57c284e3946e53a2d9f14c1 236 Gene3D G3DSA:3.90.550.10 1 236 2.9E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS23380 9fc6cd917c1d239d59c84022c8aef1bc 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 2.1E-20 T 28-03-2018 CO704_RS23380 9fc6cd917c1d239d59c84022c8aef1bc 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CO704_RS23380 9fc6cd917c1d239d59c84022c8aef1bc 93 Gene3D G3DSA:3.10.50.40 1 93 1.9E-28 T 28-03-2018 CO704_RS23380 9fc6cd917c1d239d59c84022c8aef1bc 93 SUPERFAMILY SSF54534 6 91 3.79E-27 T 28-03-2018 CO704_RS20375 49aecbbdc10b0e8dbedd0d3367b51422 272 SUPERFAMILY SSF102215 8 256 3.66E-65 T 28-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CO704_RS20375 49aecbbdc10b0e8dbedd0d3367b51422 272 Gene3D G3DSA:3.40.50.10310 1 260 3.9E-71 T 28-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CO704_RS20375 49aecbbdc10b0e8dbedd0d3367b51422 272 Pfam PF02633 Creatinine amidohydrolase 11 253 1.2E-58 T 28-03-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CO704_RS20425 124b59de569af97518edde321588b474 235 SMART SM00345 6 65 4.2E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.8E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 Pfam PF07702 UTRA domain 87 220 5.5E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 Gene3D G3DSA:3.40.1410.10 68 233 8.4E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS20425 124b59de569af97518edde321588b474 235 SMART SM00866 86 225 7.2E-33 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 SUPERFAMILY SSF46785 3 69 1.19E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20425 124b59de569af97518edde321588b474 235 Gene3D G3DSA:1.10.10.10 2 67 7.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20425 124b59de569af97518edde321588b474 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 4.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 4.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CO704_RS20425 124b59de569af97518edde321588b474 235 SUPERFAMILY SSF64288 54 231 7.54E-46 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CO704_RS10580 af61a5dc0c3b96adcd1c8f9b267dad27 176 Pfam PF08808 RES domain 31 156 1.8E-9 T 28-03-2018 IPR014914 RES domain CO704_RS10580 af61a5dc0c3b96adcd1c8f9b267dad27 176 SMART SM00953 27 160 0.0041 T 28-03-2018 IPR014914 RES domain CO704_RS24515 e9996381b635c5bdec560495fd3337c7 560 Gene3D G3DSA:3.40.720.10 246 544 3.1E-23 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS24515 e9996381b635c5bdec560495fd3337c7 560 Pfam PF08019 Domain of unknown function (DUF1705) 57 171 4.0E-18 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CO704_RS24515 e9996381b635c5bdec560495fd3337c7 560 Pfam PF00884 Sulfatase 250 538 1.2E-44 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS24515 e9996381b635c5bdec560495fd3337c7 560 SUPERFAMILY SSF53649 250 542 2.8E-20 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS11270 e02ffea87acb0431e39e981da4f3db41 369 SUPERFAMILY SSF53807 27 356 1.22E-49 T 28-03-2018 CO704_RS11270 e02ffea87acb0431e39e981da4f3db41 369 Pfam PF01497 Periplasmic binding protein 78 311 8.2E-28 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CO704_RS11270 e02ffea87acb0431e39e981da4f3db41 369 Gene3D G3DSA:3.40.50.1980 161 341 1.4E-39 T 28-03-2018 CO704_RS11270 e02ffea87acb0431e39e981da4f3db41 369 Gene3D G3DSA:3.40.50.1980 16 160 1.2E-20 T 28-03-2018 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Gene3D G3DSA:3.40.50.1100 37 148 1.8E-29 T 28-03-2018 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Gene3D G3DSA:3.40.1020.10 338 513 1.1E-71 T 28-03-2018 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 1.3E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 2.2E-27 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.0E-28 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 SUPERFAMILY SSF55021 336 423 4.35E-28 T 28-03-2018 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 SUPERFAMILY SSF55021 420 512 1.03E-25 T 28-03-2018 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 2.5E-264 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 SUPERFAMILY SSF53686 14 365 1.57E-100 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CO704_RS23405 ca70e45307cddc80a258c7a7bfef2e7e 514 Gene3D G3DSA:3.40.50.1100 149 330 3.7E-46 T 28-03-2018 CO704_RS21965 6b0cc870f83786b098fc5ce565d50572 186 SUPERFAMILY SSF53955 31 72 3.5E-15 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS21965 6b0cc870f83786b098fc5ce565d50572 186 SUPERFAMILY SSF53955 100 173 3.5E-15 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS21965 6b0cc870f83786b098fc5ce565d50572 186 Gene3D G3DSA:1.10.530.10 16 177 3.0E-14 T 28-03-2018 CO704_RS15355 8d5ef1fb2cf08057538524a7f4684b37 148 Pfam PF03733 Inner membrane component domain 77 127 2.6E-17 T 28-03-2018 IPR005185 Inner membrane component domain CO704_RS15355 8d5ef1fb2cf08057538524a7f4684b37 148 Pfam PF03733 Inner membrane component domain 4 53 1.0E-8 T 28-03-2018 IPR005185 Inner membrane component domain CO704_RS15355 8d5ef1fb2cf08057538524a7f4684b37 148 PIRSF PIRSF028777 1 139 3.3E-53 T 28-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 8.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 8.2E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 Gene3D G3DSA:1.10.10.60 4 49 3.7E-17 T 28-03-2018 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS14885 cecfd034436739831560add8da67a3a6 189 SUPERFAMILY SSF46689 3 74 1.5E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS14885 cecfd034436739831560add8da67a3a6 189 Gene3D G3DSA:1.10.10.60 50 127 3.7E-8 T 28-03-2018 CO704_RS23345 58507c242a52d1d1aa5519f569dc8e61 348 SUPERFAMILY SSF160355 53 317 4.19E-84 T 28-03-2018 CO704_RS23345 58507c242a52d1d1aa5519f569dc8e61 348 Pfam PF02706 Chain length determinant protein 14 86 5.8E-15 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CO704_RS23345 58507c242a52d1d1aa5519f569dc8e61 348 Gene3D G3DSA:3.30.1890.10 53 317 2.5E-75 T 28-03-2018 CO704_RS23345 58507c242a52d1d1aa5519f569dc8e61 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 7 346 57.31 T 28-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 SUPERFAMILY SSF52980 821 1121 7.51E-91 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.042 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 SUPERFAMILY SSF52540 369 812 4.78E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 SUPERFAMILY SSF52540 1 347 1.54E-127 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 PIRSF PIRSF000980 1 1123 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 0.0 T 28-03-2018 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 Gene3D G3DSA:1.10.486.10 442 650 9.9E-73 T 28-03-2018 CO704_RS03385 80046e2a5f6bb35496166471b9a46584 1123 Gene3D G3DSA:1.10.10.160 86 185 1.6E-30 T 28-03-2018 CO704_RS06975 7809c297f9b430743d36e5440b854fd1 358 Pfam PF01032 FecCD transport family 39 353 6.1E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS06975 7809c297f9b430743d36e5440b854fd1 358 Gene3D G3DSA:1.10.3470.10 23 357 1.0E-70 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS06975 7809c297f9b430743d36e5440b854fd1 358 SUPERFAMILY SSF81345 22 353 5.36E-79 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 Pfam PF12833 Helix-turn-helix domain 240 319 9.9E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 SMART SM00342 234 317 2.0E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 Pfam PF01965 DJ-1/PfpI family 33 178 1.3E-20 T 28-03-2018 IPR002818 DJ-1/PfpI CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 Gene3D G3DSA:1.10.10.60 274 325 2.0E-9 T 28-03-2018 CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 SUPERFAMILY SSF46689 219 267 4.17E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 SUPERFAMILY SSF52317 1 199 4.06E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 SUPERFAMILY SSF46689 271 321 1.25E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 Gene3D G3DSA:3.40.50.880 1 234 5.0E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CO704_RS09380 5f694afa8b44863b732c6ff81e275084 326 Gene3D G3DSA:1.10.10.60 235 273 7.0E-14 T 28-03-2018 CO704_RS14655 e2c8d85952eaae8010b90f80ce32ddbe 232 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 81 8.3E-22 T 28-03-2018 IPR005648 Flagellar hook capping protein CO704_RS14655 e2c8d85952eaae8010b90f80ce32ddbe 232 Pfam PF13860 FlgD Ig-like domain 119 190 1.7E-24 T 28-03-2018 IPR025965 FlgD Ig-like domain CO704_RS14655 e2c8d85952eaae8010b90f80ce32ddbe 232 Pfam PF13861 FlgD Tudor-like domain 89 229 1.1E-14 T 28-03-2018 IPR025963 FlgD Tudor-like domain CO704_RS10375 589faebe3cbc62f96f384c46c7fb384f 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 1.7E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CO704_RS10375 589faebe3cbc62f96f384c46c7fb384f 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 50 1.0E-6 T 28-03-2018 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 SUPERFAMILY SSF46689 8 73 4.34E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 Gene3D G3DSA:1.10.357.10 62 184 5.3E-17 T 28-03-2018 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.8E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.8E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.4E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 Gene3D G3DSA:1.10.10.60 7 61 4.8E-16 T 28-03-2018 CO704_RS16315 b627aeb95c7573a735c3c95767ef28a7 188 SUPERFAMILY SSF48498 83 183 1.41E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS06790 ad8a6951f2218ca42f640b71a130b7d9 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 325 1.9E-96 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CO704_RS06790 ad8a6951f2218ca42f640b71a130b7d9 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 331 46.188 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CO704_RS10515 2dcabd12ec4d82b28a258792f91937b6 235 SUPERFAMILY SSF53187 134 227 1.19E-32 T 28-03-2018 CO704_RS10515 2dcabd12ec4d82b28a258792f91937b6 235 SUPERFAMILY SSF53187 19 107 1.19E-32 T 28-03-2018 CO704_RS10515 2dcabd12ec4d82b28a258792f91937b6 235 Gene3D G3DSA:3.40.630.10 35 233 3.0E-26 T 28-03-2018 CO704_RS10515 2dcabd12ec4d82b28a258792f91937b6 235 Pfam PF00246 Zinc carboxypeptidase 72 158 1.0E-11 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 SUPERFAMILY SSF118215 29 442 3.4E-96 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 4.6E-103 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 4.7E-28 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS13875 4b74b720be5f8e781334e320ff7a756b 463 Gene3D G3DSA:1.10.3860.10 18 450 1.1E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS12710 2d9302560362ab9dcc278c788ca6f02a 204 Gene3D G3DSA:3.40.50.1820 1 200 2.5E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS12710 2d9302560362ab9dcc278c788ca6f02a 204 SUPERFAMILY SSF53474 3 198 3.37E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS12710 2d9302560362ab9dcc278c788ca6f02a 204 Pfam PF02230 Phospholipase/Carboxylesterase 2 195 6.1E-29 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CO704_RS23895 21f9639afdde6c6ddf8dacfadfdcd870 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 5.7E-138 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS23895 21f9639afdde6c6ddf8dacfadfdcd870 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CO704_RS23895 21f9639afdde6c6ddf8dacfadfdcd870 463 Pfam PF00860 Permease family 34 426 1.3E-107 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS01495 7f98e190e62ffcd94f671a73317c8d26 90 SUPERFAMILY SSF52038 1 88 2.75E-24 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CO704_RS01495 7f98e190e62ffcd94f671a73317c8d26 90 Pfam PF01337 Barstar (barnase inhibitor) 7 80 6.0E-5 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CO704_RS01495 7f98e190e62ffcd94f671a73317c8d26 90 Gene3D G3DSA:3.30.370.10 1 90 3.7E-18 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CO704_RS10745 adf2a10f73614de4ca2334462eaea0dc 300 SUPERFAMILY SSF103481 184 287 9.15E-9 T 28-03-2018 CO704_RS10745 adf2a10f73614de4ca2334462eaea0dc 300 Pfam PF00892 EamA-like transporter family 7 130 1.3E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS10745 adf2a10f73614de4ca2334462eaea0dc 300 Pfam PF00892 EamA-like transporter family 143 286 1.2E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS10745 adf2a10f73614de4ca2334462eaea0dc 300 SUPERFAMILY SSF103481 41 134 2.35E-12 T 28-03-2018 CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 SUPERFAMILY SSF51735 102 310 1.46E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 338 1.1E-20 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 Gene3D G3DSA:3.40.50.720 114 313 1.0E-53 T 28-03-2018 CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 SUPERFAMILY SSF52283 34 133 2.55E-25 T 28-03-2018 CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 310 5.0E-54 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CO704_RS15100 f830fd12669ad853c907510b4ab870ed 342 Gene3D G3DSA:3.40.50.720 1 113 6.7E-27 T 28-03-2018 CO704_RS17320 f3859e736fe2664b88ecc86ea8a0dc33 417 Gene3D G3DSA:1.20.1600.10 16 414 1.3E-45 T 28-03-2018 CO704_RS17320 f3859e736fe2664b88ecc86ea8a0dc33 417 SUPERFAMILY SSF56954 5 412 5.62E-52 T 28-03-2018 CO704_RS17320 f3859e736fe2664b88ecc86ea8a0dc33 417 Pfam PF02321 Outer membrane efflux protein 237 412 2.7E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS17320 f3859e736fe2664b88ecc86ea8a0dc33 417 Pfam PF02321 Outer membrane efflux protein 31 214 5.9E-8 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS13985 bca04b8cc6f71f35c15c4d5dc5849922 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CO704_RS13985 bca04b8cc6f71f35c15c4d5dc5849922 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.4E-10 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 652 0.0 T 28-03-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 Pfam PF12696 TraM recognition site of TraD and TraG 502 631 1.2E-11 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 SUPERFAMILY SSF52540 141 343 1.31E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 SUPERFAMILY SSF52540 395 654 1.31E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 178 225 1.2E-4 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 Gene3D G3DSA:3.40.50.300 147 658 7.9E-28 T 28-03-2018 CO704_RS21950 127846a0b2174024aad8d893050d4e21 715 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 652 4.4E-265 T 28-03-2018 IPR022458 Conjugative coupling factor TraG/TraD CO704_RS21295 3aff0aea88028b0c452f393d2765ecac 450 Gene3D G3DSA:3.30.2290.10 10 236 2.2E-60 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CO704_RS21295 3aff0aea88028b0c452f393d2765ecac 450 SUPERFAMILY SSF111283 16 449 1.2E-132 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CO704_RS21295 3aff0aea88028b0c452f393d2765ecac 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 1.4E-61 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CO704_RS10765 2442c290808f457ecd96a9bac7b101cf 222 Pfam PF01914 MarC family integral membrane protein 7 217 1.7E-65 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS10765 2442c290808f457ecd96a9bac7b101cf 222 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 213 2.8E-36 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS06025 2434d98b70d44b6de83b4a5b202fffaa 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 44.729 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CO704_RS06025 2434d98b70d44b6de83b4a5b202fffaa 256 Gene3D G3DSA:3.20.20.370 4 251 3.8E-105 T 28-03-2018 CO704_RS06025 2434d98b70d44b6de83b4a5b202fffaa 256 Pfam PF03746 LamB/YcsF family 5 242 8.0E-100 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CO704_RS06025 2434d98b70d44b6de83b4a5b202fffaa 256 SUPERFAMILY SSF88713 4 252 4.3E-97 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 SMART SM00342 25 108 2.6E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 Pfam PF12833 Helix-turn-helix domain 32 108 8.6E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 Gene3D G3DSA:1.10.10.60 1 62 4.1E-17 T 28-03-2018 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 SUPERFAMILY SSF46689 11 59 1.48E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 Gene3D G3DSA:1.10.10.60 63 127 5.5E-12 T 28-03-2018 CO704_RS10755 b3e5f9105262611ffa49857befd323ef 130 SUPERFAMILY SSF46689 62 109 2.96E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 Pfam PF00691 OmpA family 57 152 5.8E-19 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 SUPERFAMILY SSF103088 46 158 7.98E-29 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 PRINTS PR01021 OMPA domain signature 57 79 1.4E-11 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 PRINTS PR01021 OMPA domain signature 87 102 1.4E-11 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 PRINTS PR01021 OMPA domain signature 102 118 1.4E-11 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CO704_RS04415 70db6d230ecead0939a6218e99ce8252 161 Gene3D G3DSA:3.30.1330.60 27 161 1.7E-29 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS17425 7b31858f908f81c04c6a16c1356bb68b 64 Pfam PF11692 Protein of unknown function (DUF3289) 2 57 2.2E-26 T 28-03-2018 IPR017483 Conserved hypothetical protein CHP03034 CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 SUPERFAMILY SSF51556 84 396 1.54E-88 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 Gene3D G3DSA:3.20.20.140 96 395 1.1E-61 T 28-03-2018 CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 Pfam PF01979 Amidohydrolase family 81 452 2.8E-59 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 Gene3D G3DSA:2.30.40.10 19 95 4.7E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 SUPERFAMILY SSF51338 42 103 2.47E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS25030 f1f3da13131cdfc6ec9ac4e5ad36e9e7 453 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 42 449 6.2E-164 T 28-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CO704_RS00580 2b1db0df4dd8886e2844869bfe099825 281 Gene3D G3DSA:1.10.3720.10 3 270 2.2E-32 T 28-03-2018 CO704_RS00580 2b1db0df4dd8886e2844869bfe099825 281 SUPERFAMILY SSF161098 4 277 7.85E-59 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS00580 2b1db0df4dd8886e2844869bfe099825 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 1.2E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS25235 90b37c517cedc94ae2fff21bc0d68b4d 209 Pfam PF13387 Domain of unknown function (DUF4105) 51 189 5.4E-34 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 CO704_RS23995 4e9f35b5728651de4b9f0ee60e5f4ce5 174 SUPERFAMILY SSF52540 8 172 1.89E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23995 4e9f35b5728651de4b9f0ee60e5f4ce5 174 Gene3D G3DSA:3.40.50.300 3 174 6.3E-31 T 28-03-2018 CO704_RS23995 4e9f35b5728651de4b9f0ee60e5f4ce5 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 11 170 1.2E-49 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CO704_RS23995 4e9f35b5728651de4b9f0ee60e5f4ce5 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 11 144 7.7E-47 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CO704_RS06905 de6b9836682892aecccc3d549008b860 319 Gene3D G3DSA:1.10.10.10 3 86 2.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06905 de6b9836682892aecccc3d549008b860 319 SUPERFAMILY SSF53850 92 296 8.87E-38 T 28-03-2018 CO704_RS06905 de6b9836682892aecccc3d549008b860 319 SUPERFAMILY SSF46785 5 114 2.54E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06905 de6b9836682892aecccc3d549008b860 319 Gene3D G3DSA:3.40.190.10 178 267 1.3E-20 T 28-03-2018 CO704_RS06905 de6b9836682892aecccc3d549008b860 319 Pfam PF03466 LysR substrate binding domain 91 295 1.4E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS06905 de6b9836682892aecccc3d549008b860 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06905 de6b9836682892aecccc3d549008b860 319 Gene3D G3DSA:3.40.190.10 95 177 8.6E-15 T 28-03-2018 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.189 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.9E-276 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 5.4E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 SUPERFAMILY SSF55681 407 478 2.11E-107 T 28-03-2018 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 SUPERFAMILY SSF55681 10 237 2.11E-107 T 28-03-2018 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Gene3D G3DSA:3.30.930.10 11 460 1.4E-101 T 28-03-2018 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 SUPERFAMILY SSF52954 462 571 1.96E-33 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Pfam PF03129 Anticodon binding domain 475 567 2.7E-21 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Gene3D G3DSA:3.40.50.800 461 572 9.0E-32 T 28-03-2018 IPR004154 Anticodon-binding CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 6.6E-50 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 SUPERFAMILY SSF55826 219 390 9.42E-31 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS19175 67bf9ce053013dc40f620b7e6e769ee4 572 PIRSF PIRSF001535 1 572 1.6E-276 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CO704_RS09005 7e7fb007481aaba4285c9af77b12e494 415 Gene3D G3DSA:1.20.1250.20 220 415 1.6E-15 T 28-03-2018 CO704_RS09005 7e7fb007481aaba4285c9af77b12e494 415 Gene3D G3DSA:1.20.1250.20 14 216 4.1E-27 T 28-03-2018 CO704_RS09005 7e7fb007481aaba4285c9af77b12e494 415 SUPERFAMILY SSF103473 25 405 2.35E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS09005 7e7fb007481aaba4285c9af77b12e494 415 Pfam PF07690 Major Facilitator Superfamily 29 361 1.5E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS09005 7e7fb007481aaba4285c9af77b12e494 415 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CO704_RS24770 d610cae939ae9459c81fffce3e085ce5 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 1.5E-22 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CO704_RS24770 d610cae939ae9459c81fffce3e085ce5 137 Gene3D G3DSA:2.60.40.790 5 137 2.4E-20 T 28-03-2018 IPR008978 HSP20-like chaperone CO704_RS24770 d610cae939ae9459c81fffce3e085ce5 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 48.804 T 28-03-2018 IPR023728 Small heat shock protein IbpA CO704_RS24770 d610cae939ae9459c81fffce3e085ce5 137 SUPERFAMILY SSF49764 30 137 4.53E-20 T 28-03-2018 IPR008978 HSP20-like chaperone CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 276 1.4E-29 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 142 3.7E-45 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 Gene3D G3DSA:1.20.1330.10 39 249 1.3E-72 T 28-03-2018 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 PRINTS PR00207 Flagellin signature 36 53 1.4E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 PRINTS PR00207 Flagellin signature 110 133 1.4E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 PRINTS PR00207 Flagellin signature 75 94 1.4E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CO704_RS08490 c1d2012ec70fa363bb042a85bd0c7412 277 SUPERFAMILY SSF64518 1 277 2.09E-94 T 28-03-2018 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Gene3D G3DSA:3.40.190.10 181 256 2.9E-23 T 28-03-2018 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Gene3D G3DSA:3.40.190.10 257 324 0.025 T 28-03-2018 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Gene3D G3DSA:1.10.10.10 1 85 4.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Gene3D G3DSA:3.40.190.10 91 180 1.8E-20 T 28-03-2018 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Pfam PF03466 LysR substrate binding domain 92 292 3.4E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 SUPERFAMILY SSF53850 91 322 3.71E-45 T 28-03-2018 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS10330 6941c623f8213d2d3b47469a1bf4cf08 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS23140 c89950cadcadb6f090800660c82204db 275 Pfam PF01738 Dienelactone hydrolase family 48 271 5.4E-76 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CO704_RS23140 c89950cadcadb6f090800660c82204db 275 Gene3D G3DSA:3.40.50.1820 31 271 2.8E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS23140 c89950cadcadb6f090800660c82204db 275 SUPERFAMILY SSF53474 39 271 1.38E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS03530 419c857b42590678eecdf7d66655d762 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.0E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03530 419c857b42590678eecdf7d66655d762 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.8E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03530 419c857b42590678eecdf7d66655d762 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.8E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS03530 419c857b42590678eecdf7d66655d762 190 SUPERFAMILY SSF46689 3 79 1.15E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS03530 419c857b42590678eecdf7d66655d762 190 Gene3D G3DSA:1.10.357.10 1 190 1.3E-27 T 28-03-2018 CO704_RS21220 1197cb436627c231b6463050b4e690c5 100 Gene3D G3DSA:1.10.1790.10 2 100 2.2E-11 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21220 1197cb436627c231b6463050b4e690c5 100 SUPERFAMILY SSF63520 6 97 6.02E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS21220 1197cb436627c231b6463050b4e690c5 100 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 4 99 9.0E-38 T 28-03-2018 IPR020044 PRD domain protein, EF0829/AHA3910 CO704_RS24235 1ee3e9b40a402af04092a4a59e2a6de0 120 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CO704_RS24235 1ee3e9b40a402af04092a4a59e2a6de0 120 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 1.4E-40 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CO704_RS24235 1ee3e9b40a402af04092a4a59e2a6de0 120 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 23.34 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CO704_RS24235 1ee3e9b40a402af04092a4a59e2a6de0 120 PIRSF PIRSF004761 1 117 3.9E-35 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CO704_RS24235 1ee3e9b40a402af04092a4a59e2a6de0 120 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 8.0E-30 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CO704_RS04880 94656ac2efd8572c51aa0a61e6d453e5 426 Pfam PF00874 PRD domain 242 329 3.6E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS04880 94656ac2efd8572c51aa0a61e6d453e5 426 Pfam PF00874 PRD domain 133 217 1.5E-4 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS04880 94656ac2efd8572c51aa0a61e6d453e5 426 Gene3D G3DSA:1.10.1790.10 228 334 7.5E-17 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS04880 94656ac2efd8572c51aa0a61e6d453e5 426 Gene3D G3DSA:1.10.1790.10 125 223 0.014 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS04880 94656ac2efd8572c51aa0a61e6d453e5 426 SUPERFAMILY SSF63520 233 333 2.49E-17 T 28-03-2018 IPR011608 PRD domain GO:0006355 CO704_RS13025 2db286f418c1786693efd4dd66b4f1e8 553 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 552 44.194 T 28-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 CO704_RS13025 2db286f418c1786693efd4dd66b4f1e8 553 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 5 237 8.9E-45 T 28-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CO704_RS15035 69e73cce6dc81bb26045df5fddce0961 414 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site CO704_RS15035 69e73cce6dc81bb26045df5fddce0961 414 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 306 322 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site CO704_RS15035 69e73cce6dc81bb26045df5fddce0961 414 SUPERFAMILY SSF53254 24 412 8.07E-78 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS15035 69e73cce6dc81bb26045df5fddce0961 414 Gene3D G3DSA:3.40.50.1240 5 414 1.3E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS15035 69e73cce6dc81bb26045df5fddce0961 414 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 4.2E-17 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 Gene3D G3DSA:3.50.50.60 1 421 1.7E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 53.172 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 SUPERFAMILY SSF54373 269 359 7.98E-17 T 28-03-2018 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 SUPERFAMILY SSF51905 107 271 7.25E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 SUPERFAMILY SSF51905 1 54 7.25E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 SUPERFAMILY SSF51905 359 418 7.25E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS09275 a4e76db0cd11866dafa566f9974bcd66 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.6E-74 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS07920 d09306e197e8efc697749082288f7e82 217 Gene3D G3DSA:3.40.109.10 1 217 2.6E-34 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS07920 d09306e197e8efc697749082288f7e82 217 SUPERFAMILY SSF55469 1 216 1.57E-60 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS07920 d09306e197e8efc697749082288f7e82 217 Pfam PF00881 Nitroreductase family 8 193 3.3E-25 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CO704_RS15510 4c144bed49b30eedb845397053fe78c5 182 SUPERFAMILY SSF55166 66 182 1.18E-32 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS15510 4c144bed49b30eedb845397053fe78c5 182 Gene3D G3DSA:3.30.1380.10 59 182 5.6E-23 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS15510 4c144bed49b30eedb845397053fe78c5 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.1E-61 T 28-03-2018 IPR010275 Protein of unknown function DUF882 CO704_RS00805 9b3edafbafe7f3b8ca585266a9cbaf8d 271 Gene3D G3DSA:3.30.420.40 5 167 3.5E-9 T 28-03-2018 CO704_RS23775 969ed23b30f5b81ecb3811d68351f006 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 5.9E-59 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 CO704_RS23775 969ed23b30f5b81ecb3811d68351f006 265 PIRSF PIRSF037318 1 265 5.0E-134 T 28-03-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 CO704_RS23775 969ed23b30f5b81ecb3811d68351f006 265 SUPERFAMILY SSF56112 32 192 9.48E-5 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS13005 5354f64220995ec4ec214c13db1f3251 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 73 1.4E-17 T 28-03-2018 IPR018680 Protein of unknown function DUF2164 CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 Gene3D G3DSA:3.40.50.300 1 241 5.2E-72 T 28-03-2018 CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 SUPERFAMILY SSF52540 1 235 1.65E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 PIRSF PIRSF039085 1 241 7.2E-106 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 SMART SM00382 26 213 1.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS17200 f2ea9ef54ab82a2069d3a458da975552 241 Pfam PF00005 ABC transporter 18 165 3.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS08325 e81a1eab3056ffc407ebd7fb6eb24a42 231 SUPERFAMILY SSF109604 3 215 9.99E-60 T 28-03-2018 CO704_RS08325 e81a1eab3056ffc407ebd7fb6eb24a42 231 Gene3D G3DSA:1.10.3210.10 3 230 1.5E-19 T 28-03-2018 CO704_RS08325 e81a1eab3056ffc407ebd7fb6eb24a42 231 SMART SM00471 22 141 2.1E-7 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS08325 e81a1eab3056ffc407ebd7fb6eb24a42 231 Pfam PF01966 HD domain 28 130 1.8E-13 T 28-03-2018 IPR006674 HD domain CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 Gene3D G3DSA:3.40.718.10 1 341 1.1E-117 T 28-03-2018 CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 145.307 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 SUPERFAMILY SSF53659 4 340 2.14E-104 T 28-03-2018 CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 3.4E-145 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 Pfam PF02504 Fatty acid synthesis protein 5 331 4.1E-127 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CO704_RS14565 4a985497e7e1aa28a5a3e011a8012f8b 344 PIRSF PIRSF002465 2 344 8.3E-128 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CO704_RS06530 36dd491c65dca5a93b5119663a22fd04 404 Gene3D G3DSA:3.40.640.10 53 280 1.7E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS06530 36dd491c65dca5a93b5119663a22fd04 404 Gene3D G3DSA:3.90.1150.10 281 404 8.1E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS06530 36dd491c65dca5a93b5119663a22fd04 404 Pfam PF00155 Aminotransferase class I and II 35 387 4.3E-45 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS06530 36dd491c65dca5a93b5119663a22fd04 404 SUPERFAMILY SSF53383 7 401 1.02E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 Pfam PF00520 Ion transport protein 27 243 4.7E-28 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 Gene3D G3DSA:1.10.287.70 157 205 1.2E-11 T 28-03-2018 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 157 180 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 64 87 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 128 154 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 186 208 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 215 241 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 PRINTS PR00169 Potassium channel signature 90 110 3.0E-28 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 SUPERFAMILY SSF81324 26 242 1.79E-44 T 28-03-2018 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 Gene3D G3DSA:1.20.5.110 207 243 1.3E-14 T 28-03-2018 CO704_RS09885 cd4820540068fb59f13d40b08a62474a 281 Gene3D G3DSA:1.20.120.350 20 156 9.6E-23 T 28-03-2018 CO704_RS24810 b6a29e106c5e3a4993eb35fc88d3045a 254 Gene3D G3DSA:1.10.3720.10 2 254 1.7E-44 T 28-03-2018 CO704_RS24810 b6a29e106c5e3a4993eb35fc88d3045a 254 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 93 1.7E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS24810 b6a29e106c5e3a4993eb35fc88d3045a 254 SUPERFAMILY SSF161098 14 234 3.14E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24810 b6a29e106c5e3a4993eb35fc88d3045a 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 249 2.1E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.4E-123 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 SUPERFAMILY SSF51395 6 376 3.72E-99 T 28-03-2018 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.336 T 28-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 PIRSF PIRSF000138 2 380 3.5E-121 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 CO704_RS17995 70c703757e7b92d23e14a7950799cd42 380 Gene3D G3DSA:3.20.20.70 2 380 1.6E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS13215 a1042d065e5f3336d43bb45a3ab749c2 460 Pfam PF13520 Amino acid permease 5 430 7.0E-78 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS13215 a1042d065e5f3336d43bb45a3ab749c2 460 PIRSF PIRSF006060 1 459 2.0E-48 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS13215 a1042d065e5f3336d43bb45a3ab749c2 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 3.0E-178 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CO704_RS02455 c27c14d18dde4fbf9d4a8516d2bf829d 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 41.912 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CO704_RS02455 c27c14d18dde4fbf9d4a8516d2bf829d 275 SUPERFAMILY SSF56300 15 269 4.24E-62 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS02455 c27c14d18dde4fbf9d4a8516d2bf829d 275 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 3.3E-20 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS02455 c27c14d18dde4fbf9d4a8516d2bf829d 275 Gene3D G3DSA:3.60.21.10 5 270 3.0E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS02455 c27c14d18dde4fbf9d4a8516d2bf829d 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-21 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CO704_RS07955 432b3408730c54357a74681a9333ba31 167 Pfam PF08534 Redoxin 42 149 7.0E-17 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CO704_RS07955 432b3408730c54357a74681a9333ba31 167 Gene3D G3DSA:3.40.30.10 30 159 2.8E-23 T 28-03-2018 CO704_RS07955 432b3408730c54357a74681a9333ba31 167 SUPERFAMILY SSF52833 10 156 6.18E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS04360 31a5c42066964ab9b770fb97032aae62 114 Gene3D G3DSA:3.30.1450.10 37 107 5.0E-9 T 28-03-2018 CO704_RS04360 31a5c42066964ab9b770fb97032aae62 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.158 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE CO704_RS04360 31a5c42066964ab9b770fb97032aae62 114 Pfam PF04355 SmpA / OmlA family 35 104 2.5E-27 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 4.3E-131 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 Gene3D G3DSA:1.10.230.10 282 380 8.9E-37 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 Gene3D G3DSA:1.10.580.10 28 281 1.9E-87 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 SUPERFAMILY SSF48256 9 423 1.96E-166 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 219 234 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 165 178 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 360 376 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 241 269 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 380 394 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PRINTS PR00143 Citrate synthase signature 296 316 2.6E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 PIRSF PIRSF001369 38 428 5.8E-174 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CO704_RS16705 0889747daec1e8def3466877090ab0ff 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 422 8.1E-242 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.791 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 Pfam PF01252 Signal peptidase (SPase) II 16 157 1.0E-36 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 TIGRFAM TIGR00077 lspA: signal peptidase II 3 162 4.6E-57 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS19875 b4896e4fea55000d62f6362e1293b849 168 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 Gene3D G3DSA:3.60.21.10 66 280 2.6E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 Gene3D G3DSA:3.60.21.10 1 65 1.3E-17 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 281 377 1.3E-21 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 6.4E-81 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 Pfam PF00149 Calcineurin-like phosphoesterase 1 229 7.6E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS18420 05792cd21141baa8e447c22b42e195c1 405 SUPERFAMILY SSF56300 1 339 5.26E-60 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS02620 ead5c373ac05f23ce9bb32f5f8980a26 309 Gene3D G3DSA:3.40.50.2300 17 126 8.6E-22 T 28-03-2018 CO704_RS02620 ead5c373ac05f23ce9bb32f5f8980a26 309 SUPERFAMILY SSF53822 22 300 4.08E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS02620 ead5c373ac05f23ce9bb32f5f8980a26 309 Pfam PF13407 Periplasmic binding protein domain 24 280 3.0E-56 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS02620 ead5c373ac05f23ce9bb32f5f8980a26 309 Gene3D G3DSA:3.40.50.2300 127 307 2.7E-38 T 28-03-2018 CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 PRINTS PR00069 Aldo-keto reductase signature 110 128 3.5E-12 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 PRINTS PR00069 Aldo-keto reductase signature 141 158 3.5E-12 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 PRINTS PR00069 Aldo-keto reductase signature 45 69 3.5E-12 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 141 158 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 Gene3D G3DSA:3.20.20.100 4 320 4.2E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 SUPERFAMILY SSF51430 4 321 1.96E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS07235 cb06b5b1dc947b96a7fd7ddb160557bd 333 Pfam PF00248 Aldo/keto reductase family 17 310 8.0E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS18510 4e570013566fc7bce6d81ccaac1cfffe 112 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 106 6.0E-26 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CO704_RS18510 4e570013566fc7bce6d81ccaac1cfffe 112 Pfam PF10954 Protein of unknown function (DUF2755) 3 106 1.7E-35 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CO704_RS21775 f9b7b2f9545be46cbdce051997be6093 42 Pfam PF13683 Integrase core domain 2 24 2.1E-8 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CO704_RS25800 aea356742e24e906dd0171d99ef90526 225 Gene3D G3DSA:3.10.450.40 8 110 2.4E-15 T 28-03-2018 CO704_RS25800 aea356742e24e906dd0171d99ef90526 225 Pfam PF11523 Protein of unknown function (DUF3223) 34 103 9.6E-11 T 28-03-2018 CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 Pfam PF12706 Beta-lactamase superfamily domain 129 323 1.4E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 PIRSF PIRSF038896 10 364 1.4E-89 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 SUPERFAMILY SSF56281 215 363 6.16E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 SUPERFAMILY SSF56281 113 188 6.16E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 SMART SM00849 117 323 4.9E-6 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS03525 7172ec270b525a8d95942be34830b77d 375 Gene3D G3DSA:3.60.15.10 98 375 6.0E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS02800 d53b0be91f5a0964097d6e508b8bbc0d 151 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 11 137 4.3E-21 T 28-03-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system CO704_RS02800 d53b0be91f5a0964097d6e508b8bbc0d 151 Gene3D G3DSA:1.10.1220.10 101 143 2.3E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS05860 fb7c452567c73c7af018713200f3a86f 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 4.5E-31 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CO704_RS05860 fb7c452567c73c7af018713200f3a86f 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 6.0E-21 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CO704_RS23805 6ae0036b5380ae78680706e990e471fe 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS23805 6ae0036b5380ae78680706e990e471fe 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.819 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23805 6ae0036b5380ae78680706e990e471fe 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.2E-27 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23805 6ae0036b5380ae78680706e990e471fe 55 Pfam PF00471 Ribosomal protein L33 7 53 1.2E-18 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS23805 6ae0036b5380ae78680706e990e471fe 55 SUPERFAMILY SSF57829 1 53 5.01E-20 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CO704_RS15085 960adc6d32addf4827ca96018f838e8d 309 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 12 303 31.051 T 28-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CO704_RS15085 960adc6d32addf4827ca96018f838e8d 309 Pfam PF02649 Type I GTP cyclohydrolase folE2 12 298 1.3E-63 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 CO704_RS15085 960adc6d32addf4827ca96018f838e8d 309 Gene3D G3DSA:3.10.270.10 11 301 3.4E-76 T 28-03-2018 CO704_RS07850 5d931a8b459316eff7239c91198e1606 145 Gene3D G3DSA:3.10.129.10 5 144 2.5E-22 T 28-03-2018 CO704_RS07850 5d931a8b459316eff7239c91198e1606 145 SUPERFAMILY SSF54637 17 140 8.17E-24 T 28-03-2018 IPR029069 HotDog domain CO704_RS07850 5d931a8b459316eff7239c91198e1606 145 Pfam PF03061 Thioesterase superfamily 51 126 8.6E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS07850 5d931a8b459316eff7239c91198e1606 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 134 3.9E-20 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CO704_RS14065 b25706e84169dd3eaab26e3b23934922 248 Pfam PF06629 MltA-interacting protein MipA 28 248 1.8E-53 T 28-03-2018 IPR010583 MltA-interacting MipA CO704_RS14065 b25706e84169dd3eaab26e3b23934922 248 Gene3D G3DSA:2.40.160.20 8 248 3.6E-13 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS17365 af06f6315faac2ef5d8a58c75b408831 287 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 238 3.5E-11 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CO704_RS17365 af06f6315faac2ef5d8a58c75b408831 287 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.9E-110 T 28-03-2018 IPR022522 Flagellar motor stator, MotA CO704_RS17365 af06f6315faac2ef5d8a58c75b408831 287 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 SUPERFAMILY SSF51735 7 245 2.64E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.7E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.3E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 Gene3D G3DSA:3.40.50.720 5 273 1.4E-60 T 28-03-2018 CO704_RS03210 4f37f8ce2545975f08e82e0c7a4c1241 283 Pfam PF00106 short chain dehydrogenase 9 189 6.2E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 Pfam PF00297 Ribosomal protein L3 45 182 4.4E-14 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.551 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 Gene3D G3DSA:4.10.960.10 57 165 5.7E-35 T 28-03-2018 CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 7.3E-92 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01095 12e93addb63648a7382ebb1a2fbf52d0 209 SUPERFAMILY SSF50447 1 208 5.56E-80 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CO704_RS07990 a5c87ba2360e8546845e998d4fd60424 253 SUPERFAMILY SSF161098 51 241 1.96E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS07990 a5c87ba2360e8546845e998d4fd60424 253 Gene3D G3DSA:1.10.3720.10 42 246 9.9E-22 T 28-03-2018 CO704_RS07990 a5c87ba2360e8546845e998d4fd60424 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 244 1.2E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS10430 ea458f2b8ec5b36cb186819868c8a585 391 SUPERFAMILY SSF69118 212 385 5.52E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS10430 ea458f2b8ec5b36cb186819868c8a585 391 SUPERFAMILY SSF69118 79 183 3.17E-12 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS10430 ea458f2b8ec5b36cb186819868c8a585 391 Gene3D G3DSA:1.20.1290.10 41 189 3.6E-7 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS10430 ea458f2b8ec5b36cb186819868c8a585 391 Gene3D G3DSA:1.20.1290.10 230 388 2.6E-17 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CO704_RS11045 e25438b60b62ffa15e7edeb307a7dd7b 266 SUPERFAMILY SSF54197 27 252 2.46E-57 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS11045 e25438b60b62ffa15e7edeb307a7dd7b 266 Gene3D G3DSA:3.30.428.30 25 252 9.6E-68 T 28-03-2018 CO704_RS11045 e25438b60b62ffa15e7edeb307a7dd7b 266 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 27 252 2.0E-69 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Gene3D G3DSA:1.20.1270.20 1 144 4.8E-35 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Gene3D G3DSA:3.40.50.2030 376 550 6.8E-60 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 1.2E-154 T 28-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.182 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Gene3D G3DSA:1.20.1270.20 150 232 6.7E-19 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 SUPERFAMILY SSF56821 1 547 2.22E-189 T 28-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 Gene3D G3DSA:3.40.50.2030 235 375 3.4E-63 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 5.1E-232 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS15755 e26fda11574dd00fb418290041511c6c 550 PIRSF PIRSF000076 1 550 1.8E-237 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CO704_RS18675 052563ad8d47ec05352e7541837681df 165 Pfam PF03928 Haem-degrading 30 155 1.1E-26 T 28-03-2018 IPR005624 Haem-degrading CO704_RS18675 052563ad8d47ec05352e7541837681df 165 SUPERFAMILY SSF143744 24 158 1.57E-33 T 28-03-2018 CO704_RS08465 2234f1ea8fc7f9ad156809ad26e772ec 138 Pfam PF13987 YedD-like protein 25 129 3.3E-50 T 28-03-2018 IPR025596 YedD-like protein CO704_RS23760 c2a353725eae8717fa927b77b0e64db0 371 SUPERFAMILY SSF53756 44 367 1.16E-57 T 28-03-2018 CO704_RS23760 c2a353725eae8717fa927b77b0e64db0 371 Gene3D G3DSA:3.40.50.2000 35 196 1.2E-22 T 28-03-2018 CO704_RS23760 c2a353725eae8717fa927b77b0e64db0 371 Gene3D G3DSA:3.40.50.2000 197 371 1.9E-31 T 28-03-2018 CO704_RS23760 c2a353725eae8717fa927b77b0e64db0 371 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 162 333 7.6E-27 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CO704_RS11745 e54dcbd1432234f771d90da886541878 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 284 3.4E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11745 e54dcbd1432234f771d90da886541878 286 Gene3D G3DSA:1.10.3720.10 11 279 1.0E-42 T 28-03-2018 CO704_RS11745 e54dcbd1432234f771d90da886541878 286 SUPERFAMILY SSF161098 85 274 6.8E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02630 e3918b9aa685009245235a7173250dfa 342 Gene3D G3DSA:1.10.3470.10 27 331 5.6E-35 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS02630 e3918b9aa685009245235a7173250dfa 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 7.5E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS00640 7525b0113a482f773ff4c5a4138288bd 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 1.7E-30 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS00640 7525b0113a482f773ff4c5a4138288bd 197 Pfam PF01914 MarC family integral membrane protein 2 195 7.3E-63 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS25345 29ecc91e05ee2e2baca86367eec2d1a7 362 SUPERFAMILY SSF49373 148 231 4.32E-9 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CO704_RS25345 29ecc91e05ee2e2baca86367eec2d1a7 362 Gene3D G3DSA:2.60.40.10 13 137 0.014 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS25345 29ecc91e05ee2e2baca86367eec2d1a7 362 Gene3D G3DSA:2.60.40.10 138 238 6.9E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS21215 cffef350d8b5a845d679adbd28394f6e 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 3.4E-66 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CO704_RS21215 cffef350d8b5a845d679adbd28394f6e 120 Pfam PF14272 Glycine-rich SFCGS 4 117 8.5E-59 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CO704_RS10555 23e9784ea895dc7850656a2650cd7ba9 132 SUPERFAMILY SSF55021 3 66 1.28E-12 T 28-03-2018 CO704_RS10555 23e9784ea895dc7850656a2650cd7ba9 132 Pfam PF13840 ACT domain 70 126 1.5E-13 T 28-03-2018 IPR027795 GATS-like ACT domain CO704_RS10555 23e9784ea895dc7850656a2650cd7ba9 132 Gene3D G3DSA:3.30.2130.10 1 131 7.0E-28 T 28-03-2018 CO704_RS10555 23e9784ea895dc7850656a2650cd7ba9 132 Pfam PF10000 ACT domain 2 69 1.2E-21 T 28-03-2018 IPR018717 Domain of unknown function DUF2241 CO704_RS10555 23e9784ea895dc7850656a2650cd7ba9 132 SUPERFAMILY SSF55021 70 128 1.68E-18 T 28-03-2018 CO704_RS03595 68440636ea1a82fe5360243fd78b26a1 432 SUPERFAMILY SSF103473 4 418 2.62E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03595 68440636ea1a82fe5360243fd78b26a1 432 Gene3D G3DSA:1.20.1250.20 2 208 4.6E-22 T 28-03-2018 CO704_RS03595 68440636ea1a82fe5360243fd78b26a1 432 Pfam PF07690 Major Facilitator Superfamily 24 367 5.5E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS03595 68440636ea1a82fe5360243fd78b26a1 432 Gene3D G3DSA:1.20.1250.20 213 425 6.1E-15 T 28-03-2018 CO704_RS23350 cb41c71a9a7eb8410f7662b4d18d61d9 363 Pfam PF00953 Glycosyl transferase family 4 75 232 1.3E-28 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CO704_RS23350 cb41c71a9a7eb8410f7662b4d18d61d9 363 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 1.0E-165 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CO704_RS23350 cb41c71a9a7eb8410f7662b4d18d61d9 363 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.184 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 Gene3D G3DSA:3.40.190.10 187 274 3.4E-23 T 28-03-2018 CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 Gene3D G3DSA:1.10.10.10 2 98 3.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 SUPERFAMILY SSF53850 100 305 1.99E-41 T 28-03-2018 CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 Pfam PF03466 LysR substrate binding domain 100 305 1.4E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 73 3.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 SUPERFAMILY SSF46785 9 123 1.22E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS13610 e1ad9d422f0432e61fd20b23daba01fa 307 Gene3D G3DSA:3.40.190.10 99 186 1.0E-8 T 28-03-2018 CO704_RS08690 30166d2f59cb57a77e970df40a8161dc 119 SUPERFAMILY SSF63592 4 101 6.8E-38 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CO704_RS08690 30166d2f59cb57a77e970df40a8161dc 119 Gene3D G3DSA:1.10.4000.10 6 105 6.6E-45 T 28-03-2018 CO704_RS08690 30166d2f59cb57a77e970df40a8161dc 119 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 101 2.0E-41 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CO704_RS08690 30166d2f59cb57a77e970df40a8161dc 119 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 4 107 27.933 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CO704_RS08690 30166d2f59cb57a77e970df40a8161dc 119 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 3.3E-40 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CO704_RS13565 49839bcfd89dc502756bbcb57e5ecee9 382 SUPERFAMILY SSF53335 117 373 8.83E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS13565 49839bcfd89dc502756bbcb57e5ecee9 382 PIRSF PIRSF003085 3 381 2.0E-126 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CO704_RS13565 49839bcfd89dc502756bbcb57e5ecee9 382 Gene3D G3DSA:3.40.50.150 105 372 1.3E-64 T 28-03-2018 CO704_RS13565 49839bcfd89dc502756bbcb57e5ecee9 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 7.3E-102 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS07485 6ec3846d2ff66560eec5f30542ec2e83 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 48.573 T 28-03-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 CO704_RS07485 6ec3846d2ff66560eec5f30542ec2e83 321 SUPERFAMILY SSF51735 1 318 5.55E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS07485 6ec3846d2ff66560eec5f30542ec2e83 321 Gene3D G3DSA:3.40.50.720 1 159 2.0E-10 T 28-03-2018 CO704_RS07485 6ec3846d2ff66560eec5f30542ec2e83 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 1.7E-71 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS07485 6ec3846d2ff66560eec5f30542ec2e83 321 Gene3D G3DSA:3.90.25.10 160 321 1.5E-44 T 28-03-2018 CO704_RS04835 4a4699b55d5c326f3f66183740ed2aea 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 2.1E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS04835 4a4699b55d5c326f3f66183740ed2aea 329 Gene3D G3DSA:1.10.3470.10 34 319 1.2E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 Gene3D G3DSA:3.40.30.10 2 95 4.6E-26 T 28-03-2018 CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 SUPERFAMILY SSF52833 1 85 1.01E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 118 197 3.5E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 Gene3D G3DSA:1.20.1050.10 96 207 3.6E-24 T 28-03-2018 CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 SUPERFAMILY SSF47616 82 204 6.69E-26 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS07175 23f1c9f0c4e0f8fdfb0f3ab947d4749f 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 1.2E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS21280 9a7b2ba1fb728fd62704321b5082c86f 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 146 2.2E-12 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS21280 9a7b2ba1fb728fd62704321b5082c86f 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 120 148 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS21280 9a7b2ba1fb728fd62704321b5082c86f 210 Gene3D G3DSA:2.160.10.10 1 209 4.3E-42 T 28-03-2018 CO704_RS21280 9a7b2ba1fb728fd62704321b5082c86f 210 SUPERFAMILY SSF51161 51 203 9.43E-42 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS20840 76f4f565723db8c454d9d867ac940c89 197 Gene3D G3DSA:3.10.350.10 109 168 4.9E-4 T 28-03-2018 CO704_RS20840 76f4f565723db8c454d9d867ac940c89 197 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 49 1.1E-5 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal CO704_RS20840 76f4f565723db8c454d9d867ac940c89 197 Pfam PF04225 Opacity-associated protein A LysM-like domain 112 196 4.3E-32 T 28-03-2018 IPR007340 Opacity-associated protein A CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 Gene3D G3DSA:3.40.1190.20 1 309 1.1E-84 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 PRINTS PR00990 Ribokinase signature 36 55 2.7E-37 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 PRINTS PR00990 Ribokinase signature 220 231 2.7E-37 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 PRINTS PR00990 Ribokinase signature 9 30 2.7E-37 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 PRINTS PR00990 Ribokinase signature 176 191 2.7E-37 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 PRINTS PR00990 Ribokinase signature 108 121 2.7E-37 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 SUPERFAMILY SSF53613 6 305 3.43E-85 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 3.7E-76 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 5.5E-112 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CO704_RS24035 32a45ac72a5d44259ebe388ea75a075f 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 26.313 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CO704_RS22055 4ac1675cca6b0230624daed8baa4e6c8 587 Pfam PF05947 Type VI secretion system, TssF 6 581 1.5E-186 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS22055 4ac1675cca6b0230624daed8baa4e6c8 587 PIRSF PIRSF028304 1 586 1.6E-162 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS22055 4ac1675cca6b0230624daed8baa4e6c8 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 2.7E-169 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CO704_RS09500 0be51ad3ebe999b97c84e50bead2fdba 217 Gene3D G3DSA:3.50.30.40 13 188 7.4E-53 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS09500 0be51ad3ebe999b97c84e50bead2fdba 217 SUPERFAMILY SSF89562 17 175 5.62E-47 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS09500 0be51ad3ebe999b97c84e50bead2fdba 217 Pfam PF03737 Aldolase/RraA 21 168 2.0E-41 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CO704_RS17810 97e74eb7fe503a52e705fef9a62fcad8 428 Gene3D G3DSA:1.10.357.10 202 277 0.54 T 28-03-2018 CO704_RS17810 97e74eb7fe503a52e705fef9a62fcad8 428 Gene3D G3DSA:1.10.357.10 21 201 0.09 T 28-03-2018 CO704_RS17810 97e74eb7fe503a52e705fef9a62fcad8 428 Pfam PF04286 Protein of unknown function (DUF445) 45 417 2.8E-105 T 28-03-2018 IPR007383 Protein of unknown function DUF445 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 SUPERFAMILY SSF118215 17 400 1.7E-94 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 35.673 T 28-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 Pfam PF00375 Sodium:dicarboxylate symporter family 17 399 6.6E-65 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 Gene3D G3DSA:1.10.3860.10 6 406 7.4E-76 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS20650 5f1a87a688f41dabb18865e36df695a6 414 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 1.2E-16 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CO704_RS23310 fab7311b27b36064aca9d16beaa58e9d 453 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 440 5.5E-257 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CO704_RS23310 fab7311b27b36064aca9d16beaa58e9d 453 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 39.672 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CO704_RS15545 c504bbbbf00e495cce9fcd55de0decb5 297 Gene3D G3DSA:3.90.1200.10 39 292 2.0E-4 T 28-03-2018 CO704_RS15545 c504bbbbf00e495cce9fcd55de0decb5 297 Pfam PF01636 Phosphotransferase enzyme family 64 237 1.5E-6 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CO704_RS15545 c504bbbbf00e495cce9fcd55de0decb5 297 SUPERFAMILY SSF56112 5 270 1.7E-24 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS07255 b430e86ce61edacb54887de31ff81614 486 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS07255 b430e86ce61edacb54887de31ff81614 486 Pfam PF02378 Phosphotransferase system, EIIC 114 397 3.1E-39 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS07255 b430e86ce61edacb54887de31ff81614 486 Pfam PF00367 phosphotransferase system, EIIB 10 42 8.7E-15 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS07255 b430e86ce61edacb54887de31ff81614 486 SUPERFAMILY SSF55604 9 82 4.45E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS07255 b430e86ce61edacb54887de31ff81614 486 Gene3D G3DSA:3.30.1360.60 6 82 2.4E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS12510 2d6afbffd4106c3c6e48191ed5f28061 570 Gene3D G3DSA:3.30.1330.60 414 551 2.7E-33 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS12510 2d6afbffd4106c3c6e48191ed5f28061 570 SUPERFAMILY SSF103088 418 540 8.37E-32 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS12510 2d6afbffd4106c3c6e48191ed5f28061 570 Pfam PF00691 OmpA family 439 535 3.7E-16 T 28-03-2018 IPR006665 OmpA-like domain CO704_RS01530 91323f61aa3ea22688b689c05b8aecd7 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 1.3E-47 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 CO704_RS01530 91323f61aa3ea22688b689c05b8aecd7 132 PIRSF PIRSF006318 1 132 2.8E-50 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 PIRSF PIRSF038996 1 172 3.6E-70 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 SUPERFAMILY SSF52218 4 170 1.12E-52 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 Gene3D G3DSA:3.40.50.360 4 170 1.1E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.1E-76 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CO704_RS17065 6b2f595138d95d7b309fd58656a65e3c 176 Pfam PF00258 Flavodoxin 6 160 1.0E-32 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CO704_RS15750 b3d0c60cd75659e26ab72c734971eaa2 299 Pfam PF03956 Lysine exporter LysO 113 297 5.0E-56 T 28-03-2018 IPR005642 Lysine exporter LysO CO704_RS15750 b3d0c60cd75659e26ab72c734971eaa2 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 1.0E-60 T 28-03-2018 IPR005642 Lysine exporter LysO CO704_RS10845 256d2ccfce0965cb8840c28729d27ee3 160 Gene3D G3DSA:3.40.630.30 1 160 4.8E-27 T 28-03-2018 CO704_RS10845 256d2ccfce0965cb8840c28729d27ee3 160 Pfam PF13673 Acetyltransferase (GNAT) domain 31 135 1.8E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS10845 256d2ccfce0965cb8840c28729d27ee3 160 SUPERFAMILY SSF55729 1 155 6.69E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS22485 0cd69d30ba0c1b6edb30a780369b9a03 141 Pfam PF03788 LrgA family 31 122 8.6E-26 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 Gene3D G3DSA:3.40.640.10 28 268 2.8E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 Gene3D G3DSA:3.90.1150.10 269 380 1.1E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 PIRSF PIRSF000390 15 380 7.3E-83 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 7.2E-79 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 SUPERFAMILY SSF53383 19 378 2.56E-90 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS07545 198630f935bc546f0a1f1d797e564472 382 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 377 3.6E-160 T 28-03-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 PIRSF PIRSF006092 1 158 8.5E-56 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.2E-31 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.3 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 4.9E-59 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 Gene3D G3DSA:1.10.287.180 3 76 7.7E-33 T 28-03-2018 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 SUPERFAMILY SSF54534 81 157 2.49E-24 T 28-03-2018 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 SUPERFAMILY SSF46557 3 76 4.58E-29 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 4.4E-28 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS01750 a0b476d6a7910429ca7358d4a14d685a 158 Gene3D G3DSA:3.10.50.30 77 158 1.2E-26 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CO704_RS13440 d5ab754d534411c4e507c2d9405194a7 308 Gene3D G3DSA:1.10.3720.10 15 279 1.2E-43 T 28-03-2018 CO704_RS13440 d5ab754d534411c4e507c2d9405194a7 308 SUPERFAMILY SSF161098 52 265 2.35E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13440 d5ab754d534411c4e507c2d9405194a7 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 8.8E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS13440 d5ab754d534411c4e507c2d9405194a7 308 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 168 1.3E-14 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS24635 432599f0a576f056e89d21d4cdb1daea 352 PIRSF PIRSF035875 53 343 2.2E-25 T 28-03-2018 IPR017039 Virulence factor BrkB CO704_RS24635 432599f0a576f056e89d21d4cdb1daea 352 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 67 341 8.9E-125 T 28-03-2018 IPR005274 Inner membrane protein YhjD CO704_RS24635 432599f0a576f056e89d21d4cdb1daea 352 Pfam PF03631 Virulence factor BrkB 81 340 2.5E-50 T 28-03-2018 IPR017039 Virulence factor BrkB CO704_RS21250 df0a7a27f1aac4565a8d1d1de22ed7ec 319 Pfam PF03547 Membrane transport protein 5 162 5.1E-34 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CO704_RS21250 df0a7a27f1aac4565a8d1d1de22ed7ec 319 Pfam PF03547 Membrane transport protein 164 313 1.8E-24 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Gene3D G3DSA:3.40.640.10 101 412 4.7E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Gene3D G3DSA:3.90.100.10 593 711 1.9E-34 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 1.3E-47 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 SUPERFAMILY SSF52172 1 100 4.42E-26 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 SUPERFAMILY SSF55904 563 711 5.89E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 3.2E-198 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 PIRSF PIRSF009393 1 711 1.8E-289 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Gene3D G3DSA:3.90.1150.10 413 592 5.2E-56 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 66 1.0E-13 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 Gene3D G3DSA:3.40.50.220 3 100 3.8E-28 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CO704_RS02730 edf051650fee251d6e1861e417f1a811 711 SUPERFAMILY SSF53383 101 559 2.07E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS08715 75147da1bf0bbcc0a7beee7e4d8eb4c9 164 SMART SM00260 14 151 6.5E-47 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS08715 75147da1bf0bbcc0a7beee7e4d8eb4c9 164 Gene3D G3DSA:2.30.30.40 100 145 8.8E-17 T 28-03-2018 CO704_RS08715 75147da1bf0bbcc0a7beee7e4d8eb4c9 164 SUPERFAMILY SSF50341 17 157 1.44E-39 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS08715 75147da1bf0bbcc0a7beee7e4d8eb4c9 164 Gene3D G3DSA:2.40.50.180 35 99 4.1E-19 T 28-03-2018 CO704_RS08715 75147da1bf0bbcc0a7beee7e4d8eb4c9 164 Pfam PF01584 CheW-like domain 18 154 2.4E-37 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.9E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.9E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.9E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 Gene3D G3DSA:3.40.50.2300 2 123 3.8E-26 T 28-03-2018 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 SUPERFAMILY SSF52172 2 133 1.22E-26 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 SUPERFAMILY SSF46894 139 207 7.14E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 Gene3D G3DSA:1.10.10.10 124 208 1.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 SMART SM00448 2 115 2.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 200 2.3E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12965 e0bc6b956844ca5b403aa94b22c235b1 208 SMART SM00421 145 202 4.6E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS07830 1f2c8c1cc48dc09d3c1b26b57699531c 484 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 441 2.4E-66 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS07830 1f2c8c1cc48dc09d3c1b26b57699531c 484 PIRSF PIRSF006603 19 471 6.6E-71 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS07830 1f2c8c1cc48dc09d3c1b26b57699531c 484 Pfam PF01554 MatE 267 428 1.8E-22 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS07830 1f2c8c1cc48dc09d3c1b26b57699531c 484 Pfam PF01554 MatE 37 197 1.2E-32 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 Pfam PF13360 PQQ-like domain 78 320 3.9E-52 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 392 2.4E-139 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 Gene3D G3DSA:2.140.10.10 26 192 9.4E-31 T 28-03-2018 CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SUPERFAMILY SSF50998 31 390 1.73E-80 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 Gene3D G3DSA:2.140.10.10 237 364 1.1E-20 T 28-03-2018 CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 156 187 1.9E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 290 321 100.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 201 232 110.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 115 147 0.0013 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 64 96 7.5E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 330 362 0.26 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 SMART SM00564 252 283 3.1E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CO704_RS05000 a4c72e1384f3f5e7597b4294f947e261 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 41.143 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB CO704_RS25455 2234f16aaf61d88443feac6ffb56ac9e 126 Pfam PF05717 IS66 Orf2 like protein 6 103 3.2E-35 T 28-03-2018 IPR008878 Transposase IS66, Orf2 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 5.7E-248 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 Gene3D G3DSA:3.20.20.360 81 413 2.2E-106 T 28-03-2018 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 Gene3D G3DSA:1.20.1220.12 414 531 6.5E-48 T 28-03-2018 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 PIRSF PIRSF001363 1 532 2.0E-246 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 SUPERFAMILY SSF51645 10 531 4.97E-186 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 Pfam PF01274 Malate synthase 12 531 6.9E-207 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CO704_RS22805 a48bf12f27e39b47dd86f56d55abd381 532 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 28-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CO704_RS11570 dc91ab3ea1406a513a9676622c9e12dd 148 Pfam PF01476 LysM domain 98 146 2.5E-12 T 28-03-2018 IPR018392 LysM domain CO704_RS11570 dc91ab3ea1406a513a9676622c9e12dd 148 SUPERFAMILY SSF54106 95 146 2.22E-8 T 28-03-2018 IPR018392 LysM domain CO704_RS11570 dc91ab3ea1406a513a9676622c9e12dd 148 SMART SM00257 97 146 8.9E-12 T 28-03-2018 IPR018392 LysM domain CO704_RS11570 dc91ab3ea1406a513a9676622c9e12dd 148 Gene3D G3DSA:3.10.350.10 91 148 5.7E-16 T 28-03-2018 CO704_RS11570 dc91ab3ea1406a513a9676622c9e12dd 148 Pfam PF04972 BON domain 27 88 2.5E-9 T 28-03-2018 IPR007055 BON domain CO704_RS19925 48555ae7dd6a0b06d5d9364a100fbb5c 436 Gene3D G3DSA:1.20.1250.20 239 432 3.3E-19 T 28-03-2018 CO704_RS19925 48555ae7dd6a0b06d5d9364a100fbb5c 436 Gene3D G3DSA:1.20.1250.20 15 229 2.6E-27 T 28-03-2018 CO704_RS19925 48555ae7dd6a0b06d5d9364a100fbb5c 436 Pfam PF07690 Major Facilitator Superfamily 60 363 1.2E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS19925 48555ae7dd6a0b06d5d9364a100fbb5c 436 SUPERFAMILY SSF103473 12 426 1.7E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS16420 aa009b62a9768d12e0fcd3d6b5f10609 81 Pfam PF02597 ThiS family 4 81 4.4E-20 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CO704_RS16420 aa009b62a9768d12e0fcd3d6b5f10609 81 SUPERFAMILY SSF54285 1 81 6.35E-22 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CO704_RS16420 aa009b62a9768d12e0fcd3d6b5f10609 81 Gene3D G3DSA:3.10.20.30 1 81 3.4E-19 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS16420 aa009b62a9768d12e0fcd3d6b5f10609 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 81 6.7E-22 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CO704_RS18790 1594b9d4eafedac949f2788e6685b505 104 Gene3D G3DSA:3.40.50.2300 2 103 2.2E-18 T 28-03-2018 CO704_RS18790 1594b9d4eafedac949f2788e6685b505 104 SUPERFAMILY SSF52794 1 99 5.23E-20 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS18790 1594b9d4eafedac949f2788e6685b505 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 92 5.8E-6 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS11050 495c7aac8cc7385208643e63a3369bd5 281 Gene3D G3DSA:3.90.850.10 35 281 6.4E-81 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS11050 495c7aac8cc7385208643e63a3369bd5 281 SUPERFAMILY SSF56529 62 279 8.9E-80 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS11050 495c7aac8cc7385208643e63a3369bd5 281 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 278 3.7E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CO704_RS11705 a354af37be7aaacac560788fa7fea4d7 742 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 521 615 1.2E-13 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CO704_RS11705 a354af37be7aaacac560788fa7fea4d7 742 SUPERFAMILY SSF53448 71 373 2.25E-13 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS11705 a354af37be7aaacac560788fa7fea4d7 742 Pfam PF13632 Glycosyl transferase family group 2 165 378 2.1E-37 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS11705 a354af37be7aaacac560788fa7fea4d7 742 Gene3D G3DSA:3.90.550.10 36 363 7.1E-11 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS11705 a354af37be7aaacac560788fa7fea4d7 742 SUPERFAMILY SSF160246 484 623 2.04E-23 T 28-03-2018 CO704_RS07075 957be0a85009d117c80dd75699f66797 133 Pfam PF03788 LrgA family 23 113 1.6E-28 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 CO704_RS07075 957be0a85009d117c80dd75699f66797 133 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 24.022 T 28-03-2018 IPR022957 Uncharacterised protein family UPF0299 CO704_RS25045 b3fd62334d7d9fcaae8f55a23717e910 204 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 21 72 3.4E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25045 b3fd62334d7d9fcaae8f55a23717e910 204 Gene3D G3DSA:1.10.260.40 4 192 1.7E-9 T 28-03-2018 CO704_RS25045 b3fd62334d7d9fcaae8f55a23717e910 204 SUPERFAMILY SSF47413 13 72 3.56E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS06380 7352b5a4eb401d022a7514ae02a66c48 190 Pfam PF02441 Flavoprotein 2 165 8.1E-22 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS06380 7352b5a4eb401d022a7514ae02a66c48 190 Gene3D G3DSA:3.40.50.1950 2 190 5.1E-53 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS06380 7352b5a4eb401d022a7514ae02a66c48 190 SUPERFAMILY SSF52507 2 187 7.19E-59 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CO704_RS06380 7352b5a4eb401d022a7514ae02a66c48 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.662 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CO704_RS06380 7352b5a4eb401d022a7514ae02a66c48 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.2E-68 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CO704_RS13120 f080ea3de50c13a260cd2e0e8fdaeca1 330 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 12 315 2.3E-92 T 28-03-2018 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 CO704_RS13120 f080ea3de50c13a260cd2e0e8fdaeca1 330 Pfam PF03595 Voltage-dependent anion channel 11 308 5.5E-36 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CO704_RS22600 ce7f9ff142267783dd490167becd0889 237 PIRSF PIRSF017818 1 237 7.3E-117 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS22600 ce7f9ff142267783dd490167becd0889 237 Gene3D G3DSA:3.40.50.1000 27 237 3.3E-39 T 28-03-2018 IPR023214 HAD-like domain CO704_RS22600 ce7f9ff142267783dd490167becd0889 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.4E-113 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CO704_RS22600 ce7f9ff142267783dd490167becd0889 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 17 220 2.6E-41 T 28-03-2018 IPR005519 Acid phosphatase, class B-like CO704_RS22600 ce7f9ff142267783dd490167becd0889 237 SUPERFAMILY SSF56784 30 237 2.61E-72 T 28-03-2018 IPR023214 HAD-like domain CO704_RS13455 182e4309471f191660f8985417f6fd46 437 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 424 6.6E-165 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS13455 182e4309471f191660f8985417f6fd46 437 SUPERFAMILY SSF51679 4 431 2.22E-128 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS13455 182e4309471f191660f8985417f6fd46 437 Pfam PF00296 Luciferase-like monooxygenase 20 378 9.2E-62 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS13455 182e4309471f191660f8985417f6fd46 437 PIRSF PIRSF000337 3 437 1.6E-139 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CO704_RS13455 182e4309471f191660f8985417f6fd46 437 Gene3D G3DSA:3.20.20.30 1 437 2.1E-97 T 28-03-2018 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 Pfam PF00005 ABC transporter 280 434 8.3E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 Pfam PF00005 ABC transporter 29 178 2.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 Gene3D G3DSA:3.40.50.300 263 504 3.8E-32 T 28-03-2018 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 SUPERFAMILY SSF52540 12 236 5.95E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 SMART SM00382 38 233 3.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 SMART SM00382 288 483 0.78 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 Gene3D G3DSA:3.40.50.300 2 240 3.7E-52 T 28-03-2018 CO704_RS07015 6e92c4f9d18349b35c68a7a70db1f5d1 506 SUPERFAMILY SSF52540 253 490 3.9E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 SUPERFAMILY SSF55729 314 464 9.36E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 SMART SM00563 77 194 1.5E-6 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 Pfam PF01553 Acyltransferase 67 190 5.1E-9 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 Gene3D G3DSA:3.40.1130.10 29 279 4.0E-32 T 28-03-2018 CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 Pfam PF13444 Acetyltransferase (GNAT) domain 323 423 2.1E-23 T 28-03-2018 CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 SUPERFAMILY SSF69593 54 261 1.57E-13 T 28-03-2018 CO704_RS03150 7eddb7fd19ddc6a0c144f76872c91a2a 571 Gene3D G3DSA:3.40.630.30 301 481 1.4E-24 T 28-03-2018 CO704_RS18020 6f6daee5ca3751e6a70e2d7ccd5a51a7 701 Pfam PF02554 Carbon starvation protein CstA 32 403 1.9E-168 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CO704_RS18020 6f6daee5ca3751e6a70e2d7ccd5a51a7 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 5.4E-35 T 28-03-2018 IPR025299 CstA, C-terminal domain CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Gene3D G3DSA:3.90.55.10 4 90 1.4E-9 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Gene3D G3DSA:3.90.55.10 472 547 1.5E-24 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Gene3D G3DSA:3.40.228.10 548 605 7.5E-6 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Gene3D G3DSA:3.40.228.10 160 456 1.7E-55 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 663 690 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 SUPERFAMILY SSF53706 11 625 2.3E-148 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Gene3D G3DSA:2.40.40.20 606 761 8.6E-32 T 28-03-2018 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 SUPERFAMILY SSF50692 617 766 1.06E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Pfam PF00384 Molybdopterin oxidoreductase 52 508 3.0E-58 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS15130 74a77ee800d32e8ec5b07c07c3113f58 768 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 2.9E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 Gene3D G3DSA:3.40.190.10 93 175 3.8E-13 T 28-03-2018 CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 Gene3D G3DSA:3.40.190.10 176 264 1.9E-24 T 28-03-2018 CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 Gene3D G3DSA:1.10.10.10 3 84 3.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 SUPERFAMILY SSF53850 90 296 3.8E-43 T 28-03-2018 CO704_RS12950 ee30225071941511e845bee42e8e7fef 307 SUPERFAMILY SSF46785 4 87 2.06E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS23960 c88152064e70d2e75e64066bbfce7311 211 SUPERFAMILY SSF52540 16 197 1.71E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS23960 c88152064e70d2e75e64066bbfce7311 211 Gene3D G3DSA:3.40.50.300 6 207 6.7E-27 T 28-03-2018 CO704_RS23960 c88152064e70d2e75e64066bbfce7311 211 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 1.2E-73 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CO704_RS23960 c88152064e70d2e75e64066bbfce7311 211 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 27.894 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CO704_RS23960 c88152064e70d2e75e64066bbfce7311 211 Pfam PF01926 50S ribosome-binding GTPase 28 146 2.0E-19 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS04225 de37563c3c812380a422d8322b3e9667 289 Gene3D G3DSA:3.40.50.300 51 226 2.4E-23 T 28-03-2018 CO704_RS04225 de37563c3c812380a422d8322b3e9667 289 Pfam PF01926 50S ribosome-binding GTPase 39 152 5.4E-14 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CO704_RS04225 de37563c3c812380a422d8322b3e9667 289 Gene3D G3DSA:3.40.50.300 31 50 0.0012 T 28-03-2018 CO704_RS04225 de37563c3c812380a422d8322b3e9667 289 SUPERFAMILY SSF52540 22 245 1.3E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 Gene3D G3DSA:3.40.50.300 16 335 5.1E-73 T 28-03-2018 CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 1.2E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 SMART SM00382 48 254 4.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 Pfam PF00005 ABC transporter 40 196 3.8E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 SUPERFAMILY SSF52540 49 316 1.22E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 3.9E-24 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CO704_RS09875 a9fea55dc3e88fe1082101b7ae4c595f 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 PIRSF PIRSF006281 1 511 2.7E-237 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 SUPERFAMILY SSF81296 397 510 1.4E-33 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 SUPERFAMILY SSF74650 23 394 5.96E-164 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 62.573 T 28-03-2018 IPR023704 Glucan biosynthesis protein G CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 Gene3D G3DSA:2.70.98.10 23 392 4.4E-167 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 3.1E-198 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CO704_RS14785 64f133c9d9c04f6d4ebff4c61fd68baf 511 Gene3D G3DSA:2.60.40.10 398 511 2.3E-43 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS25060 dd3df38ba8ef018ec80c1f21415c819a 478 Gene3D G3DSA:2.60.120.260 370 468 4.7E-6 T 28-03-2018 IPR008979 Galactose-binding domain-like CO704_RS20000 5e74ee5de548ce10002ab07b94d7e577 276 Gene3D G3DSA:1.10.3720.10 2 267 3.6E-31 T 28-03-2018 CO704_RS20000 5e74ee5de548ce10002ab07b94d7e577 276 SUPERFAMILY SSF161098 67 254 5.23E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS20000 5e74ee5de548ce10002ab07b94d7e577 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 265 7.7E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 SUPERFAMILY SSF51998 11 762 4.81E-277 T 28-03-2018 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 2.7E-191 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 Gene3D G3DSA:3.20.70.20 6 764 2.3E-274 T 28-03-2018 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 Pfam PF01228 Glycine radical 634 745 3.3E-40 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CO704_RS02940 9598e63651a20df32e4db3c6f586a981 764 PIRSF PIRSF000379 12 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 SMART SM00646 249 403 5.1E-67 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 Gene3D G3DSA:3.40.630.40 186 408 3.2E-58 T 28-03-2018 CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 Pfam PF11741 AMIN domain 39 142 4.3E-26 T 28-03-2018 IPR021731 AMIN domain CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 SUPERFAMILY SSF53187 330 406 4.08E-54 T 28-03-2018 CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 SUPERFAMILY SSF53187 187 283 4.08E-54 T 28-03-2018 CO704_RS03410 9491e8db97c19f9ca5e8397bdcc5602d 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 189 403 6.1E-52 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS24255 a0b81856830ab8b909323bc6ea0d849a 308 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 195 208 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24255 a0b81856830ab8b909323bc6ea0d849a 308 Pfam PF00146 NADH dehydrogenase 9 303 9.7E-47 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS00250 b99ae84843f1079fec4bad357c3bb7ef 175 Gene3D G3DSA:3.40.630.30 1 175 1.6E-34 T 28-03-2018 CO704_RS00250 b99ae84843f1079fec4bad357c3bb7ef 175 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 2.6E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS00250 b99ae84843f1079fec4bad357c3bb7ef 175 SUPERFAMILY SSF55729 1 170 1.15E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS11615 93f5dbf5cc3fb744785fa9f17ef760bd 274 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 3.2E-17 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CO704_RS11615 93f5dbf5cc3fb744785fa9f17ef760bd 274 Gene3D G3DSA:3.60.21.10 1 258 1.6E-35 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS11615 93f5dbf5cc3fb744785fa9f17ef760bd 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 254 35.447 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CO704_RS11615 93f5dbf5cc3fb744785fa9f17ef760bd 274 SUPERFAMILY SSF56300 1 256 4.21E-54 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CO704_RS18070 b070585819f99a9420f0f1b49d98859a 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 2.7E-79 T 28-03-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CO704_RS18070 b070585819f99a9420f0f1b49d98859a 383 Gene3D G3DSA:3.40.50.2300 4 378 0.018 T 28-03-2018 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.8E-10 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.8E-10 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 PRINTS PR01401 Mutator MutT protein signature 77 90 2.8E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 PRINTS PR01401 Mutator MutT protein signature 2 23 2.8E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 Gene3D G3DSA:3.90.79.10 1 129 2.4E-32 T 28-03-2018 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 SUPERFAMILY SSF55811 1 126 9.75E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 7.0E-60 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CO704_RS19590 386027bc48b4cd0f871730f1ebbe1bfc 129 Pfam PF00293 NUDIX domain 7 123 2.4E-22 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS01270 473778ae8eb25ca278ecab0a2c456d3d 374 Pfam PF02481 DNA recombination-mediator protein A 67 273 6.8E-74 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CO704_RS01270 473778ae8eb25ca278ecab0a2c456d3d 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 8.8E-81 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CO704_RS01270 473778ae8eb25ca278ecab0a2c456d3d 374 SUPERFAMILY SSF102405 76 283 4.12E-42 T 28-03-2018 CO704_RS01270 473778ae8eb25ca278ecab0a2c456d3d 374 Gene3D G3DSA:3.40.50.450 106 258 8.5E-38 T 28-03-2018 CO704_RS01270 473778ae8eb25ca278ecab0a2c456d3d 374 Gene3D G3DSA:1.10.10.10 267 362 8.0E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10190 f52c760085dedac57f4fc197fc114fa6 254 SUPERFAMILY SSF141868 21 249 3.79E-48 T 28-03-2018 IPR001633 EAL domain CO704_RS10190 f52c760085dedac57f4fc197fc114fa6 254 Gene3D G3DSA:3.20.20.450 8 254 8.0E-48 T 28-03-2018 IPR001633 EAL domain CO704_RS10190 f52c760085dedac57f4fc197fc114fa6 254 Pfam PF00563 EAL domain 21 238 1.9E-37 T 28-03-2018 IPR001633 EAL domain CO704_RS10190 f52c760085dedac57f4fc197fc114fa6 254 SMART SM00052 9 243 2.2E-31 T 28-03-2018 IPR001633 EAL domain CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.4E-86 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 PIRSF PIRSF039093 1 175 7.5E-87 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 Gene3D G3DSA:3.60.20.10 2 172 6.9E-32 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 Pfam PF00227 Proteasome subunit 2 167 6.2E-24 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.542 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CO704_RS23595 23737ec9e4880b9d22d498ddc809e027 176 SUPERFAMILY SSF56235 2 172 2.44E-59 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CO704_RS05185 4edc3f1d0f39798e6147581204f85489 386 Gene3D G3DSA:3.90.1150.10 272 386 5.3E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS05185 4edc3f1d0f39798e6147581204f85489 386 SUPERFAMILY SSF53383 10 386 7.31E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS05185 4edc3f1d0f39798e6147581204f85489 386 Gene3D G3DSA:3.40.640.10 45 271 3.3E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS05185 4edc3f1d0f39798e6147581204f85489 386 Pfam PF00155 Aminotransferase class I and II 31 383 1.4E-60 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 2.7E-37 T 28-03-2018 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 SUPERFAMILY SSF53822 10 298 2.75E-45 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Gene3D G3DSA:1.10.10.60 281 340 1.2E-8 T 28-03-2018 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Pfam PF12833 Helix-turn-helix domain 309 386 2.7E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 SMART SM00342 301 384 4.9E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Gene3D G3DSA:3.40.50.2300 1 107 4.6E-9 T 28-03-2018 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 5.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 5.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Gene3D G3DSA:1.10.10.60 341 388 4.4E-11 T 28-03-2018 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 Gene3D G3DSA:3.40.50.2300 108 280 7.9E-31 T 28-03-2018 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 SUPERFAMILY SSF46689 338 387 6.09E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS24325 121d475ba47da6d472ec5cafcbf8ad5e 392 SUPERFAMILY SSF46689 284 332 8.96E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS12890 e426d55021664dbc9ac3781aa04a1d0d 258 SUPERFAMILY SSF49354 35 162 1.54E-6 T 28-03-2018 IPR008962 PapD-like CO704_RS12890 e426d55021664dbc9ac3781aa04a1d0d 258 Gene3D G3DSA:2.60.40.10 35 177 2.9E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 Pfam PF01522 Polysaccharide deacetylase 103 270 7.6E-28 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 SUPERFAMILY SSF88713 66 196 1.11E-36 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 SUPERFAMILY SSF88713 224 324 1.11E-36 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 644 8.5E-144 T 28-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 664 4.6E-268 T 28-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 CO704_RS12855 e8cc166e834585e48b1025be92ed1944 671 Gene3D G3DSA:3.20.20.370 69 491 2.2E-47 T 28-03-2018 CO704_RS14730 40e17fb5852c003aa26f8c9a3171faa8 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 6.0E-36 T 28-03-2018 IPR025730 Biofilm regulator BssS CO704_RS14730 40e17fb5852c003aa26f8c9a3171faa8 84 Pfam PF13991 BssS protein family 11 81 2.2E-36 T 28-03-2018 IPR025730 Biofilm regulator BssS CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 Gene3D G3DSA:1.10.10.10 25 102 1.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 SUPERFAMILY SSF46785 41 147 3.13E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 5.8E-10 T 28-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 SMART SM00529 56 152 9.5E-34 T 28-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 148 2.3E-13 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CO704_RS15945 a06a8e4f150bae38058327a2180dccf9 155 Gene3D G3DSA:1.10.60.10 103 149 3.9E-20 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 SMART SM00487 28 234 1.4E-50 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 Gene3D G3DSA:3.40.50.300 233 421 9.6E-44 T 28-03-2018 CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.6E-44 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.4E-28 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 SMART SM00490 270 351 1.7E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 Gene3D G3DSA:3.40.50.300 3 232 1.2E-49 T 28-03-2018 CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.518 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CO704_RS23365 55a0563104d5a5bcde07f88e7e748f25 422 SUPERFAMILY SSF52540 84 363 6.05E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 SUPERFAMILY SSF50685 25 353 6.63E-113 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 PIRSF PIRSF019422 1 364 3.1E-89 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 SMART SM00925 125 257 1.2E-69 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 Gene3D G3DSA:2.40.240.50 58 259 1.2E-62 T 28-03-2018 CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 Pfam PF06725 3D domain 277 354 4.7E-24 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CO704_RS03430 6c95ff64729b9d5b3e9c7391b169906a 365 Pfam PF03562 MltA specific insert domain 95 257 9.6E-41 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CO704_RS00680 984138bc247bb19b30ba1a95fc6361e5 273 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 1.1E-27 T 28-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CO704_RS00680 984138bc247bb19b30ba1a95fc6361e5 273 Pfam PF01694 Rhomboid family 130 264 1.7E-28 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS00680 984138bc247bb19b30ba1a95fc6361e5 273 Gene3D G3DSA:1.20.1540.10 91 265 9.6E-32 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS00680 984138bc247bb19b30ba1a95fc6361e5 273 SUPERFAMILY SSF144091 92 271 3.01E-37 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CO704_RS00680 984138bc247bb19b30ba1a95fc6361e5 273 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 266 1.2E-99 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CO704_RS04830 25fcdd1d7709a955be96fcb1876636ae 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 1.4E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS04830 25fcdd1d7709a955be96fcb1876636ae 317 Gene3D G3DSA:1.10.3470.10 16 316 1.2E-24 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS14450 3a885845ed10e389ed4f9703b513e1cd 577 Pfam PF04183 IucA / IucC family 130 372 1.5E-68 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CO704_RS14450 3a885845ed10e389ed4f9703b513e1cd 577 Pfam PF06276 Ferric iron reductase FhuF-like transporter 394 553 4.1E-35 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain CO704_RS24340 c2258ad624e61db67bb876333f010e9b 330 Gene3D G3DSA:3.40.50.2300 131 329 2.2E-35 T 28-03-2018 CO704_RS24340 c2258ad624e61db67bb876333f010e9b 330 SUPERFAMILY SSF53822 24 317 6.48E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS24340 c2258ad624e61db67bb876333f010e9b 330 Gene3D G3DSA:3.40.50.2300 26 130 3.1E-19 T 28-03-2018 CO704_RS24340 c2258ad624e61db67bb876333f010e9b 330 Pfam PF13407 Periplasmic binding protein domain 38 285 1.4E-61 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS24340 c2258ad624e61db67bb876333f010e9b 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.4E-165 T 28-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 CO704_RS00275 8ff0712ccc398399c015c1b628c49aef 141 Pfam PF00293 NUDIX domain 1 130 6.9E-20 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS00275 8ff0712ccc398399c015c1b628c49aef 141 SUPERFAMILY SSF55811 2 131 6.91E-25 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS00275 8ff0712ccc398399c015c1b628c49aef 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS00275 8ff0712ccc398399c015c1b628c49aef 141 Gene3D G3DSA:3.90.79.10 1 140 2.2E-26 T 28-03-2018 CO704_RS04585 9769cbd8966a198c1f4bdd1670a74f92 321 Pfam PF03888 MucB/RseB N-terminal domain 29 208 2.3E-61 T 28-03-2018 IPR033434 MucB/RseB, N-terminal CO704_RS04585 9769cbd8966a198c1f4bdd1670a74f92 321 Pfam PF17188 MucB/RseB C-terminal domain 218 315 1.0E-27 T 28-03-2018 IPR033436 MucB/RseB, C-terminal CO704_RS04585 9769cbd8966a198c1f4bdd1670a74f92 321 PIRSF PIRSF005427 1 321 3.8E-95 T 28-03-2018 IPR005588 MucB/RseB CO704_RS04585 9769cbd8966a198c1f4bdd1670a74f92 321 Gene3D G3DSA:2.50.20.10 20 231 9.9E-22 T 28-03-2018 CO704_RS16010 b37733a4b2628fa54a04585838e09428 435 Pfam PF02378 Phosphotransferase system, EIIC 29 349 3.0E-55 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS16010 b37733a4b2628fa54a04585838e09428 435 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 422 3.3E-136 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS16010 b37733a4b2628fa54a04585838e09428 435 PIRSF PIRSF006351 1 432 4.0E-136 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS16010 b37733a4b2628fa54a04585838e09428 435 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 422 3.3E-136 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 SUPERFAMILY SSF53850 33 271 2.72E-84 T 28-03-2018 CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 Gene3D G3DSA:3.40.190.10 32 126 3.6E-22 T 28-03-2018 CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 Pfam PF03180 NLPA lipoprotein 33 271 1.1E-100 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 Gene3D G3DSA:3.40.190.10 127 271 1.7E-49 T 28-03-2018 CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 PIRSF PIRSF002854 1 271 5.4E-107 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS19160 b124075d517df2792f17cddc73eb138b 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 2.9E-148 T 28-03-2018 IPR004872 Lipoprotein NlpA family CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 Gene3D G3DSA:3.40.250.10 124 244 4.6E-29 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 Pfam PF00581 Rhodanese-like domain 138 232 5.0E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 SMART SM00450 136 237 2.4E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.423 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 SUPERFAMILY SSF52821 114 267 1.7E-32 T 28-03-2018 IPR001763 Rhodanese-like domain CO704_RS14755 f72e292645f1c9a4ee17bf5d7b0e49a8 350 Pfam PF12368 Rhodanase C-terminal 246 308 1.9E-19 T 28-03-2018 IPR022111 Rhodanase, C-terminal CO704_RS13485 e98f7aff612d0d1b15927bdd974b7129 675 Pfam PF04632 Fusaric acid resistance protein family 20 663 5.1E-176 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CO704_RS13485 e98f7aff612d0d1b15927bdd974b7129 675 Gene3D G3DSA:1.25.10.10 237 667 0.0024 T 28-03-2018 IPR011989 Armadillo-like helical CO704_RS06225 d3a78eab6bd002e82bd27dfab41cb07c 252 Pfam PF04333 MlaA lipoprotein 30 223 4.1E-65 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CO704_RS06225 d3a78eab6bd002e82bd27dfab41cb07c 252 PRINTS PR01805 VacJ lipoprotein signature 139 156 4.8E-33 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CO704_RS06225 d3a78eab6bd002e82bd27dfab41cb07c 252 PRINTS PR01805 VacJ lipoprotein signature 49 65 4.8E-33 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CO704_RS06225 d3a78eab6bd002e82bd27dfab41cb07c 252 PRINTS PR01805 VacJ lipoprotein signature 31 44 4.8E-33 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CO704_RS06225 d3a78eab6bd002e82bd27dfab41cb07c 252 PRINTS PR01805 VacJ lipoprotein signature 100 117 4.8E-33 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CO704_RS11810 27a93a3335e40c0c6c1232a28f1a77b5 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 13 251 6.5E-99 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CO704_RS11810 27a93a3335e40c0c6c1232a28f1a77b5 251 SUPERFAMILY SSF47240 8 245 2.08E-79 T 28-03-2018 IPR009078 Ferritin-like superfamily CO704_RS11810 27a93a3335e40c0c6c1232a28f1a77b5 251 Pfam PF05138 Phenylacetic acid catabolic protein 6 251 1.4E-93 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CO704_RS11810 27a93a3335e40c0c6c1232a28f1a77b5 251 PIRSF PIRSF037834 2 251 1.1E-97 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CO704_RS11810 27a93a3335e40c0c6c1232a28f1a77b5 251 Gene3D G3DSA:1.20.1260.10 3 251 2.7E-73 T 28-03-2018 IPR012347 Ferritin-related CO704_RS08615 9cd16113dfb5536a8b03d2e8b730cef0 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 181 2.2E-38 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS08615 9cd16113dfb5536a8b03d2e8b730cef0 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 182 4.8E-33 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS08615 9cd16113dfb5536a8b03d2e8b730cef0 191 SUPERFAMILY SSF101327 22 181 2.09E-20 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CO704_RS04120 3662dbf95c125736cab3c4de54771cf9 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 297 5.2E-17 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS04120 3662dbf95c125736cab3c4de54771cf9 392 SUPERFAMILY SSF111369 57 302 9.55E-73 T 28-03-2018 CO704_RS04120 3662dbf95c125736cab3c4de54771cf9 392 Gene3D G3DSA:2.40.50.100 166 362 1.1E-5 T 28-03-2018 CO704_RS04120 3662dbf95c125736cab3c4de54771cf9 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 1.1E-81 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS04120 3662dbf95c125736cab3c4de54771cf9 392 Gene3D G3DSA:2.40.50.100 66 138 3.0E-20 T 28-03-2018 CO704_RS04155 48f1922104027893bd6a83bd68af65ab 363 Pfam PF00899 ThiF family 119 355 3.7E-37 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS04155 48f1922104027893bd6a83bd68af65ab 363 SUPERFAMILY SSF69572 118 360 7.59E-51 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS04155 48f1922104027893bd6a83bd68af65ab 363 Gene3D G3DSA:3.40.50.720 115 362 2.4E-49 T 28-03-2018 CO704_RS00995 ff4923f5fcf11e68e33cdfcb70e584a2 200 Pfam PF01810 LysE type translocator 16 190 1.9E-15 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS12065 4ae9123c52eff1b99500644342a93599 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 1.1E-19 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CO704_RS09240 6cfb99f09916cb5088a1387c70cff253 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 42.424 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CO704_RS09240 6cfb99f09916cb5088a1387c70cff253 148 PIRSF PIRSF006173 1 145 5.7E-69 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CO704_RS09240 6cfb99f09916cb5088a1387c70cff253 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 1.9E-8 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CO704_RS09635 2bbc8dfc634ce105fa3d058785f8738f 69 Gene3D G3DSA:3.30.429.10 2 66 2.4E-25 T 28-03-2018 CO704_RS09635 2bbc8dfc634ce105fa3d058785f8738f 69 SUPERFAMILY SSF55331 2 65 1.83E-20 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily CO704_RS09635 2bbc8dfc634ce105fa3d058785f8738f 69 Pfam PF01361 Tautomerase enzyme 2 62 4.5E-20 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CO704_RS09635 2bbc8dfc634ce105fa3d058785f8738f 69 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 2.0E-22 T 28-03-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CO704_RS05335 04990d945bb5b3ccb59bf7357dc0f7be 158 Pfam PF10777 Inner membrane protein YlaC 1 152 2.9E-65 T 28-03-2018 IPR019713 Inner membrane protein YlaC CO704_RS01295 95b5ab58eca63e77de27a00dc871ec70 85 SUPERFAMILY SSF160272 2 85 1.05E-30 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CO704_RS01295 95b5ab58eca63e77de27a00dc871ec70 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 4.3E-28 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CO704_RS01295 95b5ab58eca63e77de27a00dc871ec70 85 Gene3D G3DSA:3.30.160.140 5 83 1.2E-31 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CO704_RS18560 35a2c570aca9ce2836d0393f3b6f2128 376 Pfam PF00144 Beta-lactamase 37 348 1.3E-64 T 28-03-2018 IPR001466 Beta-lactamase-related CO704_RS18560 35a2c570aca9ce2836d0393f3b6f2128 376 SUPERFAMILY SSF56601 23 352 2.58E-69 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CO704_RS18560 35a2c570aca9ce2836d0393f3b6f2128 376 Gene3D G3DSA:3.40.710.10 18 366 2.1E-71 T 28-03-2018 CO704_RS00245 af0f73097bb7cabff6fb51ef8095a1c7 81 Gene3D G3DSA:3.30.1660.10 20 81 6.6E-18 T 28-03-2018 IPR025543 Dodecin-like CO704_RS00245 af0f73097bb7cabff6fb51ef8095a1c7 81 SUPERFAMILY SSF159871 2 81 9.02E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS00245 af0f73097bb7cabff6fb51ef8095a1c7 81 Pfam PF07338 Protein of unknown function (DUF1471) 30 81 3.2E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS13445 6be713c1cee7d2a99366117769e20cf7 169 Gene3D G3DSA:3.40.630.30 6 156 1.1E-20 T 28-03-2018 CO704_RS13445 6be713c1cee7d2a99366117769e20cf7 169 SUPERFAMILY SSF55729 5 134 5.32E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS13445 6be713c1cee7d2a99366117769e20cf7 169 Pfam PF00583 Acetyltransferase (GNAT) family 35 127 1.6E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS11620 12459407a2e2f6daa26b87f85c8e147c 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 283 3.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS11620 12459407a2e2f6daa26b87f85c8e147c 295 Gene3D G3DSA:1.10.3720.10 21 283 2.5E-36 T 28-03-2018 CO704_RS11620 12459407a2e2f6daa26b87f85c8e147c 295 SUPERFAMILY SSF161098 28 295 9.29E-60 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 SUPERFAMILY SSF52343 112 227 4.19E-24 T 28-03-2018 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 SUPERFAMILY SSF54292 220 321 1.97E-23 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Gene3D G3DSA:3.40.50.80 112 204 5.3E-16 T 28-03-2018 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 249 315 5.3E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 211 2.0E-6 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 SUPERFAMILY SSF63380 8 104 3.06E-20 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Gene3D G3DSA:2.40.30.10 8 103 5.1E-16 T 28-03-2018 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 1.1E-5 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.1E-5 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 1.1E-5 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Pfam PF00970 Oxidoreductase FAD-binding domain 36 104 1.2E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CO704_RS15760 34160c1ef1413c235b48872275d28806 322 Gene3D G3DSA:3.10.20.30 205 322 2.7E-19 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 Pfam PF00294 pfkB family carbohydrate kinase 19 307 1.7E-48 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 Gene3D G3DSA:3.40.1190.20 15 325 2.0E-45 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 PRINTS PR00990 Ribokinase signature 235 246 5.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 PRINTS PR00990 Ribokinase signature 191 206 5.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 PRINTS PR00990 Ribokinase signature 48 67 5.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 PRINTS PR00990 Ribokinase signature 21 42 5.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 SUPERFAMILY SSF53613 17 306 1.48E-51 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS07315 32dd6df15f07bbfca1621b4fbb04273e 326 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 369 8.5E-71 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 SMART SM00382 172 353 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 27 449 6.6E-184 T 28-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 449 4.5E-156 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 SUPERFAMILY SSF52540 100 375 1.54E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 360 369 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS16095 dee1aaa32f252af5c9e22ed9e6a1a809 454 Gene3D G3DSA:3.40.50.300 63 369 6.9E-80 T 28-03-2018 CO704_RS03435 a9f5e14dbe037fa49dbd3153451102c9 269 SUPERFAMILY SSF69572 6 259 3.14E-63 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS03435 a9f5e14dbe037fa49dbd3153451102c9 269 Pfam PF00899 ThiF family 21 260 2.6E-36 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS03435 a9f5e14dbe037fa49dbd3153451102c9 269 Gene3D G3DSA:3.40.50.720 3 268 1.5E-53 T 28-03-2018 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 SUPERFAMILY SSF51182 30 183 3.56E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 SMART SM00342 174 256 4.6E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 Pfam PF12833 Helix-turn-helix domain 180 256 1.9E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 Gene3D G3DSA:1.10.10.60 216 262 1.1E-7 T 28-03-2018 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 Gene3D G3DSA:2.60.120.10 7 98 8.2E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 Pfam PF02311 AraC-like ligand binding domain 31 91 1.4E-6 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 Gene3D G3DSA:1.10.10.60 123 215 2.5E-6 T 28-03-2018 CO704_RS06115 0db2ba52ac3aea5be98cdce6926bd29d 264 SUPERFAMILY SSF46689 214 256 9.86E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS08005 4c791222a1b0563d46dad5d8b3e9c300 340 SUPERFAMILY SSF51679 7 333 1.19E-53 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS08005 4c791222a1b0563d46dad5d8b3e9c300 340 Gene3D G3DSA:3.20.20.30 1 338 1.3E-55 T 28-03-2018 CO704_RS08005 4c791222a1b0563d46dad5d8b3e9c300 340 Pfam PF00296 Luciferase-like monooxygenase 8 250 5.5E-24 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS07550 3bb60779d67ab6acbeaf592c513e6b8a 383 Gene3D G3DSA:3.40.50.2000 1 207 6.6E-47 T 28-03-2018 CO704_RS07550 3bb60779d67ab6acbeaf592c513e6b8a 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 369 4.4E-94 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CO704_RS07550 3bb60779d67ab6acbeaf592c513e6b8a 383 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 368 8.8E-147 T 28-03-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-4085001 CO704_RS07550 3bb60779d67ab6acbeaf592c513e6b8a 383 SUPERFAMILY SSF53756 1 372 3.56E-97 T 28-03-2018 CO704_RS07550 3bb60779d67ab6acbeaf592c513e6b8a 383 Gene3D G3DSA:3.40.50.2000 208 350 6.6E-27 T 28-03-2018 CO704_RS10470 56c47b1c5497842f5647ec09e90e3f19 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 8.9E-92 T 28-03-2018 IPR014319 Phage shock protein, PspA CO704_RS10470 56c47b1c5497842f5647ec09e90e3f19 222 Pfam PF04012 PspA/IM30 family 2 216 4.8E-48 T 28-03-2018 IPR007157 PspA/IM30 CO704_RS10470 56c47b1c5497842f5647ec09e90e3f19 222 Gene3D G3DSA:1.20.1270.70 32 174 0.07 T 28-03-2018 CO704_RS10470 56c47b1c5497842f5647ec09e90e3f19 222 Gene3D G3DSA:1.20.5.110 175 222 5.0E-4 T 28-03-2018 CO704_RS14485 235d9096ae319860fc0284a5bb47a2c4 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 300 7.5E-98 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS14485 235d9096ae319860fc0284a5bb47a2c4 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.474 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CO704_RS14485 235d9096ae319860fc0284a5bb47a2c4 341 SUPERFAMILY SSF51445 3 303 4.0E-87 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS14485 235d9096ae319860fc0284a5bb47a2c4 341 Gene3D G3DSA:3.20.20.300 1 340 2.8E-82 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CO704_RS14485 235d9096ae319860fc0284a5bb47a2c4 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CO704_RS10405 5749ca551d001903b4d71eb05609d950 371 Pfam PF03824 High-affinity nickel-transport protein 13 367 8.5E-51 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CO704_RS21490 96dedcd08b34467a9641795e630efa8d 222 SUPERFAMILY SSF53335 45 198 3.21E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS21490 96dedcd08b34467a9641795e630efa8d 222 Gene3D G3DSA:3.40.50.150 100 205 3.0E-9 T 28-03-2018 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 Pfam PF00849 RNA pseudouridylate synthase 41 186 1.5E-13 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 Gene3D G3DSA:3.30.70.1560 120 202 2.8E-24 T 28-03-2018 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 Gene3D G3DSA:3.30.70.580 37 119 1.0E-14 T 28-03-2018 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 215 4.4E-59 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CO704_RS14260 a3247636637a3c9d1247c5504c492506 220 SUPERFAMILY SSF55120 40 216 7.04E-42 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CO704_RS10195 67cc817bb565ff5ac026f332adb87532 98 Pfam PF03795 YCII-related domain 2 95 2.1E-28 T 28-03-2018 IPR005545 YCII-related CO704_RS10195 67cc817bb565ff5ac026f332adb87532 98 Gene3D G3DSA:3.30.70.1060 1 98 3.0E-29 T 28-03-2018 CO704_RS10195 67cc817bb565ff5ac026f332adb87532 98 SUPERFAMILY SSF54909 2 98 6.44E-32 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CO704_RS04470 71dbbc70d8298528a410bb36db5aee6c 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.3E-75 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CO704_RS04470 71dbbc70d8298528a410bb36db5aee6c 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.2E-80 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CO704_RS04470 71dbbc70d8298528a410bb36db5aee6c 243 SUPERFAMILY SSF64438 4 242 4.03E-87 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CO704_RS04470 71dbbc70d8298528a410bb36db5aee6c 243 Gene3D G3DSA:3.60.140.10 1 243 1.2E-94 T 28-03-2018 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 SUPERFAMILY SSF46955 3 88 4.26E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 6.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 6.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 Gene3D G3DSA:1.10.1660.10 1 197 3.0E-25 T 28-03-2018 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 Pfam PF13411 MerR HTH family regulatory protein 4 71 9.2E-20 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 SMART SM00422 4 73 4.1E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS14080 4dc9c81ef8a3d622817b16542d402c7b 242 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS00360 746dadbb10c9090c84697112e0b27ab3 498 Pfam PF01384 Phosphate transporter family 30 487 2.0E-87 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CO704_RS22660 5d0a261993e2d2ef52bbc62218a3a7fb 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CO704_RS22660 5d0a261993e2d2ef52bbc62218a3a7fb 122 Gene3D G3DSA:1.10.3830.10 7 119 3.2E-43 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CO704_RS22660 5d0a261993e2d2ef52bbc62218a3a7fb 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 4.8E-36 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 1.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 1.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 1.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 1.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 1.7E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 252 2.2E-45 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 Gene3D G3DSA:3.40.50.620 1 143 3.3E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 Gene3D G3DSA:3.40.50.620 145 292 3.3E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 270 4.1E-113 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 40.897 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CO704_RS19425 2b015af1f915f90a09a01e3337d2897b 294 SUPERFAMILY SSF52374 6 285 6.97E-89 T 28-03-2018 CO704_RS18930 89623e81961612b7a678c9db75a4d999 749 SUPERFAMILY SSF56281 23 173 1.04E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS18930 89623e81961612b7a678c9db75a4d999 749 SUPERFAMILY SSF56281 273 367 1.04E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS18930 89623e81961612b7a678c9db75a4d999 749 Gene3D G3DSA:3.60.15.10 2 427 1.1E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS18930 89623e81961612b7a678c9db75a4d999 749 Pfam PF00753 Metallo-beta-lactamase superfamily 46 156 5.5E-5 T 28-03-2018 IPR001279 Metallo-beta-lactamase CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 SUPERFAMILY SSF118001 1 70 3.4E-29 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 PIRSF PIRSF006169 1 72 2.1E-37 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 1.0E-29 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 Gene3D G3DSA:1.10.10.610 1 71 4.1E-36 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.4E-35 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS00985 ee62cfb62204978e56fb4db3fc3de116 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.281 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 28-03-2018 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CO704_RS01365 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CO704_RS05545 11a4c7a6eddab473857400014b9be1c5 219 Gene3D G3DSA:1.10.3720.10 1 216 2.3E-35 T 28-03-2018 CO704_RS05545 11a4c7a6eddab473857400014b9be1c5 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 213 2.1E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05545 11a4c7a6eddab473857400014b9be1c5 219 SUPERFAMILY SSF161098 9 201 1.01E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 Pfam PF02049 Flagellar hook-basal body complex protein FliE 39 119 4.2E-22 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 45 118 1.3E-14 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 11 120 13.467 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 100 4.1E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 105 118 4.1E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS17540 6b544a8842758e2a4f75281784efb281 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 50 66 4.1E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CO704_RS05010 aec3fe3016a8559e7738200ebb37df6a 235 SUPERFAMILY SSF52499 7 226 3.66E-58 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS05010 aec3fe3016a8559e7738200ebb37df6a 235 Pfam PF00857 Isochorismatase family 24 215 7.6E-46 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS05010 aec3fe3016a8559e7738200ebb37df6a 235 Gene3D G3DSA:3.40.50.850 18 233 2.2E-56 T 28-03-2018 CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 33.502 T 28-03-2018 IPR007432 Protein of unknown function DUF480 CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 SUPERFAMILY SSF46785 2 84 1.54E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 Gene3D G3DSA:1.10.10.10 2 87 2.7E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 SUPERFAMILY SSF46785 90 173 2.44E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 2.7E-60 T 28-03-2018 IPR007432 Protein of unknown function DUF480 CO704_RS14700 3f37fc4434fa201e1052513732f39c72 215 Gene3D G3DSA:1.10.10.10 97 171 4.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21055 1d372d38f3a633c3e5617cb3a93e7c1c 482 Pfam PF04055 Radical SAM superfamily 80 252 8.7E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS21055 1d372d38f3a633c3e5617cb3a93e7c1c 482 SMART SM00729 72 300 9.9E-23 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CO704_RS21055 1d372d38f3a633c3e5617cb3a93e7c1c 482 SUPERFAMILY SSF102114 44 470 1.57E-63 T 28-03-2018 CO704_RS21055 1d372d38f3a633c3e5617cb3a93e7c1c 482 Gene3D G3DSA:3.20.20.70 58 408 1.1E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS13750 3b0e12002c999e154b14e145e0c7cac6 319 Gene3D G3DSA:1.10.3470.10 1 319 3.2E-68 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS13750 3b0e12002c999e154b14e145e0c7cac6 319 Pfam PF01032 FecCD transport family 5 313 4.8E-91 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS13750 3b0e12002c999e154b14e145e0c7cac6 319 SUPERFAMILY SSF81345 3 313 1.57E-82 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 Gene3D G3DSA:3.40.1370.10 141 199 1.2E-11 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 Gene3D G3DSA:3.40.1370.10 4 140 7.7E-48 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 9.0E-75 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 SUPERFAMILY SSF52166 10 200 2.35E-72 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.2E-64 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CO704_RS01100 de19eb4be3c35a5328430c562c9f2d38 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.843 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS22125 203dcb1f43db363b9f5123b05f4d2c6e 163 SUPERFAMILY SSF141452 2 160 2.48E-44 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS22125 203dcb1f43db363b9f5123b05f4d2c6e 163 Gene3D G3DSA:2.30.110.20 1 163 1.3E-51 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS22125 203dcb1f43db363b9f5123b05f4d2c6e 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.2E-49 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS22125 203dcb1f43db363b9f5123b05f4d2c6e 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 5.8E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 PRINTS PR00446 Hydrogen uptake protein signature 33 50 1.3E-10 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.3E-10 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.3E-10 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.3E-10 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.3E-10 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 142 5.0E-35 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 SUPERFAMILY SSF53163 1 144 1.28E-34 T 28-03-2018 IPR023430 Peptidase HybD-like domain CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 4 144 9.2E-63 T 28-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 Gene3D G3DSA:3.40.50.1450 2 155 5.9E-34 T 28-03-2018 IPR023430 Peptidase HybD-like domain CO704_RS24280 a8e230e3367b907835e03b9c0fa7e777 159 Pfam PF01750 Hydrogenase maturation protease 22 140 2.3E-27 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CO704_RS13510 bb3efd4d5e57be7274262cb4db4c3b1b 365 Gene3D G3DSA:3.20.20.70 5 365 6.0E-123 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS13510 bb3efd4d5e57be7274262cb4db4c3b1b 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 8.4E-92 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CO704_RS13510 bb3efd4d5e57be7274262cb4db4c3b1b 365 SUPERFAMILY SSF51395 3 363 1.65E-119 T 28-03-2018 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 Gene3D G3DSA:3.20.20.100 1 263 2.4E-83 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PIRSF PIRSF000097 1 266 1.5E-64 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 Pfam PF00248 Aldo/keto reductase family 8 250 5.1E-51 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 SUPERFAMILY SSF51430 2 257 3.14E-82 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.4E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.4E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.4E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.4E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS19115 fdd91c2829ffdbc2778c916f32d1a408 268 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.4E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS12040 5e662bc0eb0f457e86f3d8abdb448fe4 108 SUPERFAMILY SSF103481 8 105 3.4E-6 T 28-03-2018 CO704_RS12040 5e662bc0eb0f457e86f3d8abdb448fe4 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.187 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CO704_RS12040 5e662bc0eb0f457e86f3d8abdb448fe4 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 7.6E-45 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CO704_RS18360 598776b81872d556867571a195e84c86 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.2E-166 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CO704_RS18360 598776b81872d556867571a195e84c86 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.702 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CO704_RS18360 598776b81872d556867571a195e84c86 356 SUPERFAMILY SSF111337 1 343 1.26E-138 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CO704_RS18360 598776b81872d556867571a195e84c86 356 Gene3D G3DSA:3.40.1780.10 1 129 1.0E-30 T 28-03-2018 CO704_RS18360 598776b81872d556867571a195e84c86 356 Gene3D G3DSA:3.40.1780.10 175 344 1.1E-65 T 28-03-2018 CO704_RS18360 598776b81872d556867571a195e84c86 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 1.7E-132 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CO704_RS25510 5ab331b023b2cb67a7fb87255b5496a5 110 Pfam PF05513 TraA 1 88 1.1E-13 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CO704_RS25050 9dab7349cfc7013e5b0cc9d87d174b12 202 Gene3D G3DSA:1.10.10.10 38 194 2.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25050 9dab7349cfc7013e5b0cc9d87d174b12 202 SUPERFAMILY SSF46785 27 99 4.79E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 SMART SM00997 151 309 5.3E-55 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 SMART SM00996 1 350 2.7E-9 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 SUPERFAMILY SSF51735 151 309 9.09E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 SUPERFAMILY SSF52283 310 347 3.57E-22 T 28-03-2018 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 SUPERFAMILY SSF52283 7 150 3.57E-22 T 28-03-2018 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 111 2.6E-10 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 165 306 4.2E-33 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 Gene3D G3DSA:3.40.50.1480 1 130 8.2E-18 T 28-03-2018 CO704_RS20450 fce704e8c11fbcd711152b9e7b399ec5 352 Gene3D G3DSA:3.40.50.1480 170 350 4.4E-26 T 28-03-2018 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 2.6E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 SUPERFAMILY SSF46894 149 212 3.4E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 Gene3D G3DSA:1.10.10.10 118 214 9.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS14840 368ae7b11101040cbd160eb9752f6ee3 216 SMART SM00421 153 210 1.4E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS13890 a23a0304aa9973de96c5bddf445b0d6c 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 275 5.4E-80 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CO704_RS13890 a23a0304aa9973de96c5bddf445b0d6c 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.785 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 CO704_RS13890 a23a0304aa9973de96c5bddf445b0d6c 275 Gene3D G3DSA:3.40.50.620 2 274 1.9E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS13890 a23a0304aa9973de96c5bddf445b0d6c 275 Pfam PF02540 NAD synthase 23 265 3.5E-75 T 28-03-2018 IPR022310 NAD/GMP synthase CO704_RS13890 a23a0304aa9973de96c5bddf445b0d6c 275 SUPERFAMILY SSF52402 3 273 1.59E-83 T 28-03-2018 CO704_RS25075 8bb8eb0f6099ac62b0e347297f4c77cb 454 SUPERFAMILY SSF56112 297 424 3.12E-8 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS25075 8bb8eb0f6099ac62b0e347297f4c77cb 454 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 20 104 2.9E-20 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS25075 8bb8eb0f6099ac62b0e347297f4c77cb 454 SUPERFAMILY SSF56399 66 101 5.75E-5 T 28-03-2018 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 Pfam PF01420 Type I restriction modification DNA specificity domain 225 399 7.1E-8 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 Pfam PF01420 Type I restriction modification DNA specificity domain 64 192 6.3E-9 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 SUPERFAMILY SSF116734 2 219 5.4E-34 T 28-03-2018 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 Gene3D G3DSA:3.90.220.20 192 396 7.6E-26 T 28-03-2018 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 Gene3D G3DSA:3.90.220.20 3 191 8.8E-24 T 28-03-2018 CO704_RS02135 52e9ed9e9f0f45036fcfbad986b4ad29 411 SUPERFAMILY SSF116734 224 410 7.19E-29 T 28-03-2018 CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 72 8.0E-10 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 Gene3D G3DSA:1.10.10.10 1 76 1.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 Pfam PF01380 SIS domain 124 249 4.3E-7 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 Gene3D G3DSA:3.40.50.10490 87 279 1.7E-17 T 28-03-2018 CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 SUPERFAMILY SSF53697 94 253 4.89E-12 T 28-03-2018 CO704_RS19015 cd3563b856bf286ee2944befc613cd37 279 SUPERFAMILY SSF46689 2 79 1.45E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS14790 09aef63dcdcb1acf8008b4f304d9bc00 386 Pfam PF01757 Acyltransferase family 11 357 1.1E-29 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS14790 09aef63dcdcb1acf8008b4f304d9bc00 386 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 2 375 37.413 T 28-03-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 CO704_RS14435 053a9cd094118d47bfa9996cd9317f5b 403 Pfam PF07690 Major Facilitator Superfamily 19 336 1.2E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS14435 053a9cd094118d47bfa9996cd9317f5b 403 Gene3D G3DSA:1.20.1250.20 11 215 7.0E-17 T 28-03-2018 CO704_RS14435 053a9cd094118d47bfa9996cd9317f5b 403 Gene3D G3DSA:1.20.1250.20 216 403 9.1E-8 T 28-03-2018 CO704_RS14435 053a9cd094118d47bfa9996cd9317f5b 403 SUPERFAMILY SSF103473 12 399 1.11E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS20410 42ea4f27775f8900ecf9004515505449 254 SUPERFAMILY SSF52499 42 253 7.06E-51 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS20410 42ea4f27775f8900ecf9004515505449 254 Gene3D G3DSA:3.40.50.850 25 254 5.8E-55 T 28-03-2018 CO704_RS20410 42ea4f27775f8900ecf9004515505449 254 Pfam PF00857 Isochorismatase family 49 247 1.0E-42 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS06780 71a145305c12d1c5639a307b11d75df5 587 Gene3D G3DSA:3.40.720.10 259 555 6.6E-32 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS06780 71a145305c12d1c5639a307b11d75df5 587 SUPERFAMILY SSF53649 261 577 2.76E-49 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS06780 71a145305c12d1c5639a307b11d75df5 587 Pfam PF11893 Domain of unknown function (DUF3413) 6 253 4.1E-104 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal CO704_RS06780 71a145305c12d1c5639a307b11d75df5 587 PIRSF PIRSF004950 6 587 1.9E-215 T 28-03-2018 IPR012159 Inner membrane protein YejM CO704_RS06780 71a145305c12d1c5639a307b11d75df5 587 Pfam PF00884 Sulfatase 261 501 7.8E-29 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS23320 77e95dd522b5b8fe4e885807e0a903d2 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.3E-8 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CO704_RS23320 77e95dd522b5b8fe4e885807e0a903d2 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 41.315 T 28-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 PIRSF PIRSF002070 2 160 8.5E-41 T 28-03-2018 CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 1.3E-62 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.357 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 Gene3D G3DSA:2.40.50.140 1 118 5.3E-46 T 28-03-2018 CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 SUPERFAMILY SSF50249 4 176 5.83E-62 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS22585 29f4740bfea7601c29d35ac75eb93ed4 176 Pfam PF00436 Single-strand binding protein family 6 112 1.4E-42 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CO704_RS18830 7cd1bb64723ae5961e8653be2053cea9 163 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 163 83.235 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CO704_RS18830 7cd1bb64723ae5961e8653be2053cea9 163 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 1.6E-67 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CO704_RS18830 7cd1bb64723ae5961e8653be2053cea9 163 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.3E-32 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 CO704_RS23915 dd0a0b79a9e7b59d6369b29f05b9e7cf 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 281 23.392 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CO704_RS23915 dd0a0b79a9e7b59d6369b29f05b9e7cf 290 Pfam PF03631 Virulence factor BrkB 29 273 1.6E-55 T 28-03-2018 IPR017039 Virulence factor BrkB CO704_RS23915 dd0a0b79a9e7b59d6369b29f05b9e7cf 290 PIRSF PIRSF035875 4 290 1.6E-69 T 28-03-2018 IPR017039 Virulence factor BrkB CO704_RS23915 dd0a0b79a9e7b59d6369b29f05b9e7cf 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 274 1.9E-100 T 28-03-2018 IPR017039 Virulence factor BrkB CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 Pfam PF01476 LysM domain 42 85 3.5E-10 T 28-03-2018 IPR018392 LysM domain CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 Gene3D G3DSA:3.10.350.10 38 87 9.8E-10 T 28-03-2018 CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 SUPERFAMILY SSF141523 94 232 4.05E-30 T 28-03-2018 CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 Gene3D G3DSA:2.40.440.10 92 234 1.2E-30 T 28-03-2018 CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 SUPERFAMILY SSF54106 40 85 6.54E-5 T 28-03-2018 IPR018392 LysM domain CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 SMART SM00257 41 85 1.4E-8 T 28-03-2018 IPR018392 LysM domain CO704_RS13630 05a1c8aa33c261dc6847361516f55f15 332 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 3.7E-22 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 SUPERFAMILY SSF51283 1 150 3.53E-54 T 28-03-2018 IPR029054 dUTPase-like CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.097 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 Pfam PF00692 dUTPase 16 149 1.2E-43 T 28-03-2018 IPR029054 dUTPase-like CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 Gene3D G3DSA:2.70.40.10 2 115 1.6E-39 T 28-03-2018 CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 Gene3D G3DSA:2.70.40.10 116 150 6.5E-16 T 28-03-2018 CO704_RS23825 ae88fee009d6ea85d40d7bddebb07e57 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.4E-49 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 Gene3D G3DSA:1.10.1740.10 7 78 6.7E-14 T 28-03-2018 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 Pfam PF04542 Sigma-70 region 2 15 77 1.1E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 SUPERFAMILY SSF88946 12 77 1.41E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 Pfam PF08281 Sigma-70, region 4 104 156 3.1E-7 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 Gene3D G3DSA:1.10.10.10 98 172 2.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 SUPERFAMILY SSF88659 100 160 2.24E-8 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS09790 761ad4c8da2ffe2183c7121229f2afef 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 160 4.4E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS15920 0ef39c0111f95506b1447ef727fa17f2 401 SUPERFAMILY SSF103473 7 389 3.53E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS15920 0ef39c0111f95506b1447ef727fa17f2 401 Pfam PF07690 Major Facilitator Superfamily 221 393 2.5E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS15920 0ef39c0111f95506b1447ef727fa17f2 401 Gene3D G3DSA:1.20.1250.20 204 392 1.9E-24 T 28-03-2018 CO704_RS15920 0ef39c0111f95506b1447ef727fa17f2 401 Gene3D G3DSA:1.20.1250.20 6 203 7.8E-17 T 28-03-2018 CO704_RS07615 f24fc307ceba3604ca980d75fe9031e2 263 Pfam PF00977 Histidine biosynthesis protein 5 237 3.1E-60 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CO704_RS07615 f24fc307ceba3604ca980d75fe9031e2 263 SUPERFAMILY SSF51366 1 235 1.41E-57 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS07615 f24fc307ceba3604ca980d75fe9031e2 263 Gene3D G3DSA:3.20.20.70 4 241 2.2E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 Pfam PF03466 LysR substrate binding domain 97 281 1.0E-26 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS06535 15681f34085715da60d6df7764d54da8 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 SUPERFAMILY SSF53850 96 286 1.14E-26 T 28-03-2018 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 Gene3D G3DSA:3.40.190.10 183 262 6.1E-15 T 28-03-2018 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 Gene3D G3DSA:3.40.190.10 99 182 6.2E-13 T 28-03-2018 CO704_RS06535 15681f34085715da60d6df7764d54da8 311 SUPERFAMILY SSF46785 10 90 2.22E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06535 15681f34085715da60d6df7764d54da8 311 Gene3D G3DSA:1.10.10.10 9 93 2.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12515 2eaea7e80d6edc1fde78ad166a1e9cbb 229 Pfam PF09850 Type VI secretion system protein DotU 14 215 4.6E-37 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS12515 2eaea7e80d6edc1fde78ad166a1e9cbb 229 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 1.3E-30 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 Gene3D G3DSA:3.40.50.1360 1 137 3.7E-41 T 28-03-2018 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 SUPERFAMILY SSF100950 1 146 7.91E-48 T 28-03-2018 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 SUPERFAMILY SSF75445 127 198 2.09E-23 T 28-03-2018 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.3E-70 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 9.5E-59 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 Gene3D G3DSA:3.30.70.260 138 196 3.0E-22 T 28-03-2018 CO704_RS02965 3cd0aa034c82ba490c0551632754f7f0 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.639 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CO704_RS01590 2ae14687177e90db0403b0244aff8162 242 SUPERFAMILY SSF53955 56 231 1.97E-61 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS01590 2ae14687177e90db0403b0244aff8162 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 44.108 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CO704_RS01590 2ae14687177e90db0403b0244aff8162 242 Pfam PF00912 Transglycosylase 60 227 1.6E-52 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS01590 2ae14687177e90db0403b0244aff8162 242 Gene3D G3DSA:1.10.3810.10 52 239 7.7E-58 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CO704_RS01590 2ae14687177e90db0403b0244aff8162 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 11 231 3.4E-87 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CO704_RS02695 9719bb96e66c81d0e4acc8e82a26f680 298 Gene3D G3DSA:3.40.190.10 179 284 8.4E-10 T 28-03-2018 CO704_RS02695 9719bb96e66c81d0e4acc8e82a26f680 298 SUPERFAMILY SSF53850 9 281 9.31E-47 T 28-03-2018 CO704_RS02695 9719bb96e66c81d0e4acc8e82a26f680 298 Gene3D G3DSA:3.40.190.10 7 178 3.4E-27 T 28-03-2018 CO704_RS02695 9719bb96e66c81d0e4acc8e82a26f680 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 281 3.2E-41 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS02695 9719bb96e66c81d0e4acc8e82a26f680 298 SMART SM00062 53 283 6.8E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS19435 4715e238b93d8de2f8cae60705af84e2 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.0E-35 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CO704_RS19435 4715e238b93d8de2f8cae60705af84e2 159 Gene3D G3DSA:3.30.70.560 1 158 3.4E-56 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CO704_RS19435 4715e238b93d8de2f8cae60705af84e2 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CO704_RS19435 4715e238b93d8de2f8cae60705af84e2 159 SUPERFAMILY SSF55083 1 158 8.5E-54 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CO704_RS19435 4715e238b93d8de2f8cae60705af84e2 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.0E-44 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CO704_RS18080 e6d95ff710e9732d8f554f7e92067e73 85 Pfam PF11823 Protein of unknown function (DUF3343) 5 51 5.1E-10 T 28-03-2018 IPR021778 Domain of unknown function DUF3343 CO704_RS23880 139ed607cfb6a6ebd5fc6e33374b4d6b 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 6.9E-37 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CO704_RS23880 139ed607cfb6a6ebd5fc6e33374b4d6b 229 Gene3D G3DSA:3.40.1280.10 1 190 1.6E-47 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS23880 139ed607cfb6a6ebd5fc6e33374b4d6b 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.2E-24 T 28-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CO704_RS23880 139ed607cfb6a6ebd5fc6e33374b4d6b 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 37.426 T 28-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CO704_RS23880 139ed607cfb6a6ebd5fc6e33374b4d6b 229 SUPERFAMILY SSF75217 4 177 3.73E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS24840 125f10a31fdead5a2b00239ac1f05628 445 PIRSF PIRSF002746 2 445 4.1E-140 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS24840 125f10a31fdead5a2b00239ac1f05628 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 4.3E-160 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS24840 125f10a31fdead5a2b00239ac1f05628 445 Pfam PF02447 GntP family permease 9 444 5.9E-155 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS22865 2828199490de8c4b25e12a63195ce147 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.32 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CO704_RS22865 2828199490de8c4b25e12a63195ce147 223 Pfam PF04493 Endonuclease V 12 206 4.0E-74 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CO704_RS05540 8155e062365938cb8600cf0216311232 338 Gene3D G3DSA:3.30.70.260 248 338 2.4E-20 T 28-03-2018 CO704_RS05540 8155e062365938cb8600cf0216311232 338 Pfam PF09383 NIL domain 262 335 2.6E-16 T 28-03-2018 IPR018449 NIL domain CO704_RS05540 8155e062365938cb8600cf0216311232 338 SMART SM00382 31 219 1.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS05540 8155e062365938cb8600cf0216311232 338 SUPERFAMILY SSF55021 252 337 4.92E-17 T 28-03-2018 CO704_RS05540 8155e062365938cb8600cf0216311232 338 SMART SM00930 259 336 1.2E-20 T 28-03-2018 IPR018449 NIL domain CO704_RS05540 8155e062365938cb8600cf0216311232 338 SUPERFAMILY SSF52540 1 241 8.35E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05540 8155e062365938cb8600cf0216311232 338 Pfam PF00005 ABC transporter 23 170 6.9E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS05540 8155e062365938cb8600cf0216311232 338 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS05540 8155e062365938cb8600cf0216311232 338 Gene3D G3DSA:3.40.50.300 1 247 1.4E-77 T 28-03-2018 CO704_RS09035 d3c6e9968ed4f39659e2ca7eedf2e61a 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 404 2.1E-178 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CO704_RS09035 d3c6e9968ed4f39659e2ca7eedf2e61a 414 SUPERFAMILY SSF48695 198 242 9.91E-5 T 28-03-2018 IPR011031 Multihaem cytochrome CO704_RS09035 d3c6e9968ed4f39659e2ca7eedf2e61a 414 Gene3D G3DSA:2.10.230.10 11 241 0.0066 T 28-03-2018 CO704_RS09035 d3c6e9968ed4f39659e2ca7eedf2e61a 414 Pfam PF04403 Paraquat-inducible protein A 250 405 2.7E-44 T 28-03-2018 IPR007498 Paraquat-inducible protein A CO704_RS09035 d3c6e9968ed4f39659e2ca7eedf2e61a 414 Pfam PF04403 Paraquat-inducible protein A 54 204 6.6E-39 T 28-03-2018 IPR007498 Paraquat-inducible protein A CO704_RS09150 787e1ea192b4321a2294ce13df688159 337 Pfam PF00795 Carbon-nitrogen hydrolase 6 193 1.8E-29 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS09150 787e1ea192b4321a2294ce13df688159 337 Pfam PF00795 Carbon-nitrogen hydrolase 218 281 1.0E-9 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS09150 787e1ea192b4321a2294ce13df688159 337 Gene3D G3DSA:3.60.110.10 2 305 9.4E-59 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS09150 787e1ea192b4321a2294ce13df688159 337 SUPERFAMILY SSF56317 3 177 9.03E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS09150 787e1ea192b4321a2294ce13df688159 337 SUPERFAMILY SSF56317 212 302 9.03E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CO704_RS07305 2d9582fc5f51886ee98045867e140744 266 SUPERFAMILY SSF53613 5 266 1.71E-79 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS07305 2d9582fc5f51886ee98045867e140744 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 7.0E-106 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS07305 2d9582fc5f51886ee98045867e140744 266 Gene3D G3DSA:3.40.1190.20 1 266 1.6E-64 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS07305 2d9582fc5f51886ee98045867e140744 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 5.5E-94 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CO704_RS20300 d564774772814cf2c2990a89baa453e4 206 SMART SM01207 10 185 4.8E-85 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CO704_RS20300 d564774772814cf2c2990a89baa453e4 206 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 1.4E-82 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CO704_RS20300 d564774772814cf2c2990a89baa453e4 206 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 2.9E-50 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CO704_RS20300 d564774772814cf2c2990a89baa453e4 206 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.732 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.3E-22 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 2.4E-20 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 SUPERFAMILY SSF160113 3 61 1.23E-18 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 Gene3D G3DSA:3.30.160.160 54 99 2.4E-13 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 Gene3D G3DSA:3.30.160.160 4 48 4.1E-16 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS02280 294233e1aae423d13c60ec01874b7ac8 110 SUPERFAMILY SSF160113 62 109 5.89E-17 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CO704_RS04840 545768175b1c1739204741dc47228033 499 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS04840 545768175b1c1739204741dc47228033 499 SMART SM00382 32 222 1.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04840 545768175b1c1739204741dc47228033 499 SMART SM00382 283 478 6.6E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS04840 545768175b1c1739204741dc47228033 499 SUPERFAMILY SSF52540 263 487 2.25E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04840 545768175b1c1739204741dc47228033 499 SUPERFAMILY SSF52540 7 235 7.48E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS04840 545768175b1c1739204741dc47228033 499 Pfam PF00005 ABC transporter 275 429 3.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS04840 545768175b1c1739204741dc47228033 499 Pfam PF00005 ABC transporter 23 174 3.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS04840 545768175b1c1739204741dc47228033 499 Gene3D G3DSA:3.40.50.300 4 243 1.3E-50 T 28-03-2018 CO704_RS04840 545768175b1c1739204741dc47228033 499 Gene3D G3DSA:3.40.50.300 256 494 1.8E-37 T 28-03-2018 CO704_RS02490 ba656b635cbd07401dff5d7bcff49e74 133 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 131 1.1E-45 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 CO704_RS02490 ba656b635cbd07401dff5d7bcff49e74 133 SUPERFAMILY SSF101756 36 131 1.83E-32 T 28-03-2018 IPR005220 Bacterial OB-fold CO704_RS02490 ba656b635cbd07401dff5d7bcff49e74 133 Pfam PF04076 Bacterial OB fold (BOF) protein 38 131 1.7E-36 T 28-03-2018 IPR005220 Bacterial OB-fold CO704_RS02490 ba656b635cbd07401dff5d7bcff49e74 133 Gene3D G3DSA:2.40.50.200 22 133 1.5E-37 T 28-03-2018 CO704_RS05280 c21b4ba5b07f51f05efb27ff44c4b05c 466 Pfam PF02378 Phosphotransferase system, EIIC 110 396 6.0E-32 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS05280 c21b4ba5b07f51f05efb27ff44c4b05c 466 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.8E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS05280 c21b4ba5b07f51f05efb27ff44c4b05c 466 SUPERFAMILY SSF55604 7 80 4.05E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS05280 c21b4ba5b07f51f05efb27ff44c4b05c 466 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CO704_RS05280 c21b4ba5b07f51f05efb27ff44c4b05c 466 Gene3D G3DSA:3.30.1360.60 4 80 3.8E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CO704_RS06180 40ddfd53719205b8c44b0df9eafd9634 313 Gene3D G3DSA:1.20.1080.10 34 294 3.3E-48 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS06180 40ddfd53719205b8c44b0df9eafd9634 313 Pfam PF01226 Formate/nitrite transporter 42 278 2.0E-38 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CO704_RS01505 5eaef12623723f68f7b2e305b78d0d57 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 1.2E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS01505 5eaef12623723f68f7b2e305b78d0d57 87 SUPERFAMILY SSF159871 3 87 1.31E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS01505 5eaef12623723f68f7b2e305b78d0d57 87 Gene3D G3DSA:3.30.1660.10 21 87 4.7E-24 T 28-03-2018 IPR025543 Dodecin-like CO704_RS04315 91fa2ecfbb87651b7cbf2678f97cb3fe 413 Pfam PF00589 Phage integrase family 214 377 8.0E-32 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS04315 91fa2ecfbb87651b7cbf2678f97cb3fe 413 SUPERFAMILY SSF56349 105 387 5.3E-55 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CO704_RS04315 91fa2ecfbb87651b7cbf2678f97cb3fe 413 Gene3D G3DSA:1.10.150.130 95 210 8.5E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CO704_RS04315 91fa2ecfbb87651b7cbf2678f97cb3fe 413 Pfam PF13356 Arm DNA-binding domain 8 94 3.0E-18 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CO704_RS04315 91fa2ecfbb87651b7cbf2678f97cb3fe 413 Gene3D G3DSA:1.10.443.10 211 392 4.5E-25 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CO704_RS12530 3a98533ffe636f50c13d4999b986cb64 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.4E-46 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CO704_RS12530 3a98533ffe636f50c13d4999b986cb64 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 157 4.5E-50 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CO704_RS19470 4d434fd816cf9f7c13f955dbd68969d8 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS19470 4d434fd816cf9f7c13f955dbd68969d8 308 SUPERFAMILY SSF52540 3 232 4.8E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS19470 4d434fd816cf9f7c13f955dbd68969d8 308 SMART SM00382 30 213 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS19470 4d434fd816cf9f7c13f955dbd68969d8 308 Pfam PF00005 ABC transporter 21 165 7.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS19470 4d434fd816cf9f7c13f955dbd68969d8 308 Gene3D G3DSA:3.40.50.300 1 288 1.2E-64 T 28-03-2018 CO704_RS21850 411c4e7ddeed6cd9cf4c9e268168ee0f 482 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 54 476 5.9E-164 T 28-03-2018 IPR021204 Integrating conjugative element protein, PFL4711 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 SMART SM00342 21 104 8.7E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 Pfam PF12833 Helix-turn-helix domain 28 106 7.7E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 Gene3D G3DSA:1.10.10.60 58 114 2.7E-12 T 28-03-2018 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 Gene3D G3DSA:1.10.10.60 1 57 9.8E-14 T 28-03-2018 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 SUPERFAMILY SSF46689 6 55 8.96E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS04125 521008aa26a6fc10befd2e27a80010a2 116 SUPERFAMILY SSF46689 58 108 1.25E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS08880 5ed1a47cafed0dfdbb5edfb6197fb498 314 SUPERFAMILY SSF53807 27 312 2.55E-78 T 28-03-2018 CO704_RS08880 5ed1a47cafed0dfdbb5edfb6197fb498 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 310 1.3E-57 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CO704_RS08880 5ed1a47cafed0dfdbb5edfb6197fb498 314 Gene3D G3DSA:3.40.50.1980 194 312 1.1E-26 T 28-03-2018 CO704_RS08880 5ed1a47cafed0dfdbb5edfb6197fb498 314 Gene3D G3DSA:3.40.50.1980 27 193 2.4E-46 T 28-03-2018 CO704_RS19185 367d3311e3c51553ad42f387a3f6f15e 229 Pfam PF04170 NlpE N-terminal domain 44 125 2.0E-26 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE CO704_RS19185 367d3311e3c51553ad42f387a3f6f15e 229 Pfam PF17185 NlpE C-terminal OB domain 139 228 1.7E-33 T 28-03-2018 IPR033450 NlpE, C-terminal OB domain CO704_RS07335 590d1c0d72b49f305a25ae3290b6f63b 350 SMART SM01133 68 326 2.7E-40 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS07335 590d1c0d72b49f305a25ae3290b6f63b 350 Gene3D G3DSA:3.20.20.70 52 347 2.0E-65 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS07335 590d1c0d72b49f305a25ae3290b6f63b 350 SUPERFAMILY SSF51569 270 343 4.88E-65 T 28-03-2018 CO704_RS07335 590d1c0d72b49f305a25ae3290b6f63b 350 SUPERFAMILY SSF51569 56 242 4.88E-65 T 28-03-2018 CO704_RS07335 590d1c0d72b49f305a25ae3290b6f63b 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 1.5E-72 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 SUPERFAMILY SSF51905 381 452 7.38E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 SUPERFAMILY SSF51905 596 632 7.38E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 SUPERFAMILY SSF51905 81 350 7.38E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 Pfam PF13450 NAD(P)-binding Rossmann-like domain 86 150 2.4E-12 T 28-03-2018 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 Gene3D G3DSA:3.50.50.60 78 633 4.6E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 SUPERFAMILY SSF51905 357 446 1.59E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06070 08d65997b54df0b5de18e9e0378c31ad 634 SUPERFAMILY SSF51905 72 169 1.59E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 4.3E-206 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 Gene3D G3DSA:3.20.20.70 4 294 2.2E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 PIRSF PIRSF009264 1 428 1.2E-199 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 Pfam PF08013 Tagatose 6 phosphate kinase 5 423 1.2E-199 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 Gene3D G3DSA:1.10.400.20 295 408 3.8E-46 T 28-03-2018 CO704_RS21100 2eec444d584a6fe7a270e0e8a5cbfcd2 430 SUPERFAMILY SSF51569 6 424 2.93E-169 T 28-03-2018 CO704_RS02195 5e4af9b689e80e1fa6ff21847d85d4eb 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 7.7E-39 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CO704_RS02195 5e4af9b689e80e1fa6ff21847d85d4eb 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-26 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CO704_RS00405 0c51150a8e17ab3eab9997af6e014496 309 SUPERFAMILY SSF103481 195 299 8.5E-8 T 28-03-2018 CO704_RS00405 0c51150a8e17ab3eab9997af6e014496 309 Pfam PF00892 EamA-like transporter family 162 290 7.0E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS00405 0c51150a8e17ab3eab9997af6e014496 309 Pfam PF00892 EamA-like transporter family 19 144 7.3E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS00405 0c51150a8e17ab3eab9997af6e014496 309 SUPERFAMILY SSF103481 54 148 1.31E-6 T 28-03-2018 CO704_RS06945 5a5d5bcde4f28b1ae4eadcd169479099 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 7.3E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06945 5a5d5bcde4f28b1ae4eadcd169479099 261 Gene3D G3DSA:3.40.190.10 18 140 1.1E-27 T 28-03-2018 CO704_RS06945 5a5d5bcde4f28b1ae4eadcd169479099 261 Gene3D G3DSA:3.40.190.10 141 211 1.0E-11 T 28-03-2018 CO704_RS06945 5a5d5bcde4f28b1ae4eadcd169479099 261 SMART SM00062 34 254 3.4E-39 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS06945 5a5d5bcde4f28b1ae4eadcd169479099 261 SUPERFAMILY SSF53850 1 253 7.67E-54 T 28-03-2018 CO704_RS21825 ba5c37a803fc37aff0ca0ac133460196 768 Gene3D G3DSA:3.40.50.200 204 576 2.6E-27 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CO704_RS21825 ba5c37a803fc37aff0ca0ac133460196 768 Pfam PF00082 Subtilase family 223 553 5.6E-36 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CO704_RS21825 ba5c37a803fc37aff0ca0ac133460196 768 SUPERFAMILY SSF52743 222 417 1.44E-35 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CO704_RS21825 ba5c37a803fc37aff0ca0ac133460196 768 SUPERFAMILY SSF52743 450 567 1.44E-35 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 Gene3D G3DSA:2.30.130.30 1 102 7.8E-16 T 28-03-2018 CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 SMART SM01022 5 103 2.4E-29 T 28-03-2018 IPR007374 ASCH domain CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 PIRSF PIRSF029143 1 104 1.8E-44 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 30.425 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 SUPERFAMILY SSF88697 2 102 4.14E-31 T 28-03-2018 IPR015947 PUA-like domain CO704_RS11470 86216679fe6e63094d181a54b440a58f 105 Pfam PF04266 ASCH domain 6 93 1.0E-14 T 28-03-2018 IPR007374 ASCH domain CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 SMART SM00833 224 318 1.2E-11 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 316 2.0E-18 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 SUPERFAMILY SSF90002 224 316 1.44E-23 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 Gene3D G3DSA:3.40.50.300 1 202 2.6E-41 T 28-03-2018 CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 SUPERFAMILY SSF52540 3 183 5.72E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 Gene3D G3DSA:3.30.1220.10 208 319 3.3E-19 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CO704_RS12905 a3ebf9b333cafda4dd76addc09f1b5de 321 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 183 1.4E-48 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CO704_RS00780 3f8eaa618d10bb7f17f6053b9e313981 133 Gene3D G3DSA:3.10.290.10 2 105 4.8E-27 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS00780 3f8eaa618d10bb7f17f6053b9e313981 133 Pfam PF01479 S4 domain 9 54 3.9E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS00780 3f8eaa618d10bb7f17f6053b9e313981 133 SUPERFAMILY SSF55174 9 103 6.28E-30 T 28-03-2018 CO704_RS00780 3f8eaa618d10bb7f17f6053b9e313981 133 SMART SM00363 9 70 1.2E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CO704_RS00780 3f8eaa618d10bb7f17f6053b9e313981 133 PIRSF PIRSF016821 6 133 1.3E-40 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CO704_RS25040 3f70b2cd509672403b96ddcb0520924a 287 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 89 279 5.5E-25 T 28-03-2018 IPR003744 Queuosine precursor transporter CO704_RS25040 3f70b2cd509672403b96ddcb0520924a 287 Pfam PF02592 Putative vitamin uptake transporter 116 272 3.8E-38 T 28-03-2018 IPR003744 Queuosine precursor transporter CO704_RS13050 97476cf289d03be0c06c3c73d534e52a 654 Pfam PF01136 Peptidase family U32 79 304 3.3E-71 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS13050 97476cf289d03be0c06c3c73d534e52a 654 Gene3D G3DSA:3.20.20.70 8 277 6.1E-8 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS13050 97476cf289d03be0c06c3c73d534e52a 654 Pfam PF12392 Collagenase 391 505 1.1E-18 T 28-03-2018 IPR020988 Peptidase U32, collagenase CO704_RS13050 97476cf289d03be0c06c3c73d534e52a 654 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 Pfam PF02040 Arsenical pump membrane protein 4 423 2.1E-158 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 2 426 5.6E-215 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS09765 670ad13c3145f292a6e7b23c6c857591 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 1.6E-122 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CO704_RS01855 b22cf99e35eef7fb14e948d028ea4fa4 331 Pfam PF01136 Peptidase family U32 77 330 2.8E-67 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS01855 b22cf99e35eef7fb14e948d028ea4fa4 331 Gene3D G3DSA:3.20.20.150 9 324 4.4E-17 T 28-03-2018 CO704_RS01855 b22cf99e35eef7fb14e948d028ea4fa4 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS01855 b22cf99e35eef7fb14e948d028ea4fa4 331 SUPERFAMILY SSF51391 11 162 5.23E-6 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CO704_RS12170 91fa2776118d5932a07b11362dc93f49 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 320 2.9E-69 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS12170 91fa2776118d5932a07b11362dc93f49 361 Pfam PF06996 Type VI secretion, TssG 21 320 1.1E-74 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS12200 6f3c4974109cb4606b43f79881b678bf 197 Gene3D G3DSA:1.10.260.40 19 128 2.3E-7 T 28-03-2018 CO704_RS24750 a511b821e94fe58f24b076d4327a2864 373 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 39 370 7.8E-97 T 28-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CO704_RS24750 a511b821e94fe58f24b076d4327a2864 373 SUPERFAMILY SSF55909 33 371 1.09E-107 T 28-03-2018 CO704_RS24750 a511b821e94fe58f24b076d4327a2864 373 Gene3D G3DSA:3.75.10.10 28 373 5.8E-110 T 28-03-2018 CO704_RS14575 cf5450b5e2dce5c8769067b142775172 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 5.8E-17 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 SUPERFAMILY SSF46785 2 104 3.69E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 Gene3D G3DSA:3.40.190.10 170 257 1.0E-16 T 28-03-2018 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 SUPERFAMILY SSF53850 83 290 6.52E-39 T 28-03-2018 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 Gene3D G3DSA:3.40.190.10 85 169 1.3E-16 T 28-03-2018 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 8.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 Gene3D G3DSA:1.10.10.10 1 78 2.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15135 2cb6b41f0562ca212096c5145fa33c48 295 Pfam PF03466 LysR substrate binding domain 83 286 4.2E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 Gene3D G3DSA:3.30.70.20 1 20 1.5E-4 T 28-03-2018 CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 Gene3D G3DSA:3.30.70.20 21 43 2.8E-8 T 28-03-2018 CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 Gene3D G3DSA:3.30.70.20 44 76 0.085 T 28-03-2018 CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 SUPERFAMILY SSF54862 5 64 1.23E-17 T 28-03-2018 CO704_RS04635 e3e3482322a92a32e22fd531ca85e9ac 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 2.5E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CO704_RS12045 bf511ac86e46598c59803c9e742d9a50 132 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 16 132 7.0E-26 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CO704_RS12045 bf511ac86e46598c59803c9e742d9a50 132 Pfam PF06932 Protein of unknown function (DUF1283) 45 86 1.0E-10 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CO704_RS12045 bf511ac86e46598c59803c9e742d9a50 132 Pfam PF06932 Protein of unknown function (DUF1283) 85 132 6.8E-20 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 PIRSF PIRSF002741 16 531 4.2E-116 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 Gene3D G3DSA:3.40.190.10 163 300 1.3E-43 T 28-03-2018 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 SUPERFAMILY SSF53850 25 528 3.26E-155 T 28-03-2018 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 Gene3D G3DSA:3.10.105.10 301 502 8.9E-62 T 28-03-2018 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 Gene3D G3DSA:3.90.76.10 50 162 1.6E-28 T 28-03-2018 CO704_RS13105 3f8618fef2a6a8672bd36870deefb0f6 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 6.6E-104 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS20705 d6c34f36481f193d008d478170de329d 130 Pfam PF07681 DoxX 9 87 2.7E-17 T 28-03-2018 IPR032808 DoxX family CO704_RS12880 0f888e1188ecddb6d5eeffeb8fde30f5 797 Pfam PF16967 E-set like domain 235 299 1.7E-19 T 28-03-2018 IPR032636 Pilus assembly protein, E-set like domain CO704_RS12880 0f888e1188ecddb6d5eeffeb8fde30f5 797 Pfam PF15976 CS1-pili formation C-terminal 683 775 1.6E-19 T 28-03-2018 IPR031917 Pilus assembly protein, C-terminal domain CO704_RS24180 2520471a197fad13e645fb924e7bafaa 225 SUPERFAMILY SSF50800 4 224 1.26E-74 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CO704_RS24180 2520471a197fad13e645fb924e7bafaa 225 Pfam PF03473 MOSC domain 48 160 3.0E-20 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CO704_RS24180 2520471a197fad13e645fb924e7bafaa 225 Gene3D G3DSA:2.40.33.20 1 225 4.6E-52 T 28-03-2018 CO704_RS24180 2520471a197fad13e645fb924e7bafaa 225 Pfam PF03475 3-alpha domain 170 210 1.4E-13 T 28-03-2018 IPR005163 3-alpha domain CO704_RS00060 5e3cbe04d9fd90e680cace0158108235 78 SUPERFAMILY SSF47336 5 60 5.37E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS00060 5e3cbe04d9fd90e680cace0158108235 78 Gene3D G3DSA:1.10.1200.10 3 76 8.0E-12 T 28-03-2018 CO704_RS00060 5e3cbe04d9fd90e680cace0158108235 78 Pfam PF00550 Phosphopantetheine attachment site 8 58 1.3E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 273 2.9E-78 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 11 308 1.6E-91 T 28-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 36 297 8.1E-50 T 28-03-2018 CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 SUPERFAMILY SSF53850 49 304 3.26E-47 T 28-03-2018 CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 Gene3D G3DSA:3.40.190.10 137 248 2.2E-28 T 28-03-2018 CO704_RS02530 6c750612767ac5b306cbcdeed08000d5 313 Gene3D G3DSA:3.40.190.10 52 136 1.9E-4 T 28-03-2018 CO704_RS13765 ffd8092d4b25f4ec36e183751b36bda3 243 Pfam PF00563 EAL domain 12 223 3.2E-10 T 28-03-2018 IPR001633 EAL domain CO704_RS13765 ffd8092d4b25f4ec36e183751b36bda3 243 Gene3D G3DSA:3.20.20.450 11 240 1.7E-8 T 28-03-2018 IPR001633 EAL domain CO704_RS13765 ffd8092d4b25f4ec36e183751b36bda3 243 SUPERFAMILY SSF141868 12 223 3.4E-9 T 28-03-2018 IPR001633 EAL domain CO704_RS11560 b75cb4ce78f6857b836f92c25786cf32 57 Pfam PF10753 Toxin GhoT_OrtT 4 57 3.0E-26 T 28-03-2018 IPR019689 Toxin GhoT/OrtT CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 Gene3D G3DSA:1.20.1050.10 89 209 3.9E-17 T 28-03-2018 CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 6.0E-19 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 Gene3D G3DSA:3.40.30.10 1 88 4.2E-24 T 28-03-2018 CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.6E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 SUPERFAMILY SSF52833 7 90 1.46E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS01550 2e238461d38ab8d0d34c9deaa643b1a2 213 SUPERFAMILY SSF47616 82 208 1.24E-26 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CO704_RS01710 c5d866bc053b33780d10b097be452d3a 323 Gene3D G3DSA:1.10.600.10 1 323 2.0E-104 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS01710 c5d866bc053b33780d10b097be452d3a 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CO704_RS01710 c5d866bc053b33780d10b097be452d3a 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CO704_RS01710 c5d866bc053b33780d10b097be452d3a 323 SUPERFAMILY SSF48576 6 322 1.39E-101 T 28-03-2018 IPR008949 Isoprenoid synthase domain CO704_RS01710 c5d866bc053b33780d10b097be452d3a 323 Pfam PF00348 Polyprenyl synthetase 30 263 5.4E-78 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 321 147.281 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 PIRSF PIRSF017020 1 321 1.0E-116 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 43 319 3.1E-67 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 2.8E-133 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 Gene3D G3DSA:3.40.630.10 34 298 2.5E-33 T 28-03-2018 CO704_RS13920 9eb2e6761891f920b3f02a60e125626d 321 SUPERFAMILY SSF53187 1 319 6.95E-90 T 28-03-2018 CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 SMART SM00855 3 157 2.3E-20 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 Gene3D G3DSA:3.40.50.1240 1 214 4.0E-52 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 SUPERFAMILY SSF53254 1 208 1.28E-55 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 8.0E-56 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 57.171 T 28-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 PIRSF PIRSF000709 2 133 1.3E-8 T 28-03-2018 CO704_RS20035 f4185cb4388d841ed8fa609461dc37db 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CO704_RS18685 33c3394f458e6c014681e3d5d60235ed 214 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 36 214 3.4E-80 T 28-03-2018 IPR015304 ZinT domain GO:0008270 CO704_RS18685 33c3394f458e6c014681e3d5d60235ed 214 Gene3D G3DSA:2.40.128.20 28 214 3.8E-66 T 28-03-2018 IPR012674 Calycin CO704_RS18685 33c3394f458e6c014681e3d5d60235ed 214 SUPERFAMILY SSF50814 30 214 8.03E-73 T 28-03-2018 IPR012674 Calycin CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 Gene3D G3DSA:3.30.420.10 9 214 1.2E-29 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 118.598 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 4.3E-107 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 SMART SM00479 18 203 1.7E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 SUPERFAMILY SSF53098 12 207 3.96E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS13520 a2acbc180b944c95fa8b4c6158c3e556 217 Pfam PF00929 Exonuclease 20 194 4.7E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS03990 64e6f331370351f03a6aed638e71473b 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 108 3.7E-28 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CO704_RS03990 64e6f331370351f03a6aed638e71473b 109 Gene3D G3DSA:1.20.120.20 3 92 1.0E-6 T 28-03-2018 CO704_RS09715 59b3d1c30586b40c2e40e94659b846ec 117 Pfam PF02635 DsrE/DsrF-like family 2 117 1.7E-21 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CO704_RS09715 59b3d1c30586b40c2e40e94659b846ec 117 SUPERFAMILY SSF75169 1 117 3.01E-33 T 28-03-2018 IPR027396 DsrEFH-like CO704_RS09715 59b3d1c30586b40c2e40e94659b846ec 117 Gene3D G3DSA:3.40.1260.10 1 117 1.3E-27 T 28-03-2018 CO704_RS09305 e2c095d3f00f287ec4fcbbb0a188c9e2 83 Pfam PF04226 Transglycosylase associated protein 34 83 1.8E-15 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CO704_RS22565 39e8dc073075a0b1cf6fb1b5dfb53f1b 331 SUPERFAMILY SSF53474 90 327 3.13E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS22565 39e8dc073075a0b1cf6fb1b5dfb53f1b 331 Pfam PF07859 alpha/beta hydrolase fold 106 305 2.0E-48 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CO704_RS22565 39e8dc073075a0b1cf6fb1b5dfb53f1b 331 Gene3D G3DSA:3.40.50.1820 19 331 6.9E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS08295 020a0c6c2892724afe5a7d15ca53fbd0 104 Gene3D G3DSA:3.40.50.2300 2 101 2.8E-36 T 28-03-2018 CO704_RS08295 020a0c6c2892724afe5a7d15ca53fbd0 104 SUPERFAMILY SSF52794 3 99 5.93E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS08295 020a0c6c2892724afe5a7d15ca53fbd0 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.3E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS08295 020a0c6c2892724afe5a7d15ca53fbd0 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 1.4E-30 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CO704_RS00475 ac436f92048a158c6b328334ee03d157 208 Pfam PF07947 YhhN family 26 205 5.8E-38 T 28-03-2018 IPR012506 YhhN-like GO:0016021 CO704_RS12180 9b05d914a32db3278f13f85f1ce1c83c 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 490 1.7E-107 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CO704_RS12180 9b05d914a32db3278f13f85f1ce1c83c 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 2.6E-22 T 28-03-2018 IPR010657 ImpA, N-terminal CO704_RS12180 9b05d914a32db3278f13f85f1ce1c83c 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 230 490 1.1E-77 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CO704_RS20180 6def08e5de28348e80a02632dbdda369 79 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 75 1.0E-13 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 CO704_RS20180 6def08e5de28348e80a02632dbdda369 79 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 8.0E-30 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 CO704_RS10490 6f91b8f2001a0d6b3d4b9f9c34b48424 465 Pfam PF04317 YcjX-like family, DUF463 20 464 6.1E-185 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CO704_RS10490 6f91b8f2001a0d6b3d4b9f9c34b48424 465 Gene3D G3DSA:3.40.50.300 1 366 7.4E-15 T 28-03-2018 CO704_RS10490 6f91b8f2001a0d6b3d4b9f9c34b48424 465 PIRSF PIRSF019381 1 465 1.4E-216 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CO704_RS16055 28cd6ed225e3b67f36a9a95a691d295c 211 Pfam PF14891 Effector protein 26 208 7.6E-26 T 28-03-2018 IPR028208 Effector protein NleD-like CO704_RS16055 28cd6ed225e3b67f36a9a95a691d295c 211 Gene3D G3DSA:3.90.1240.10 20 210 8.1E-23 T 28-03-2018 CO704_RS12300 2480ed66fb08ef3c33b803da693590e6 129 Gene3D G3DSA:3.30.1380.10 1 122 1.9E-19 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS12300 2480ed66fb08ef3c33b803da693590e6 129 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 56 122 6.8E-14 T 28-03-2018 CO704_RS12300 2480ed66fb08ef3c33b803da693590e6 129 SUPERFAMILY SSF55166 6 122 7.06E-24 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CO704_RS21730 60970d9ef2ce5477f7bccc76b9e0798f 247 SUPERFAMILY SSF46894 22 100 3.97E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS21730 60970d9ef2ce5477f7bccc76b9e0798f 247 Gene3D G3DSA:1.10.10.10 6 111 5.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS21730 60970d9ef2ce5477f7bccc76b9e0798f 247 SMART SM00862 23 100 6.0E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS21730 60970d9ef2ce5477f7bccc76b9e0798f 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 5.2E-10 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS06155 d12d1d3d266e4bec592aab18dc702401 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 6 215 7.3E-11 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS06155 d12d1d3d266e4bec592aab18dc702401 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 213 7.0E-4 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 Gene3D G3DSA:1.10.10.10 4 89 1.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 2.0E-14 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 Gene3D G3DSA:3.90.76.10 129 256 1.1E-17 T 28-03-2018 CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 3.0E-43 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 SUPERFAMILY SSF53850 121 547 4.16E-60 T 28-03-2018 CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 SUPERFAMILY SSF46785 22 83 3.07E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19740 f779723eb60e085c10d4795afcd11e55 552 Gene3D G3DSA:3.40.190.10 257 312 1.7E-7 T 28-03-2018 CO704_RS12145 77edee658cadf98ea20641e6416f027e 91 Pfam PF09905 DNA-binding protein VF530 4 65 6.8E-34 T 28-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CO704_RS12145 77edee658cadf98ea20641e6416f027e 91 Gene3D G3DSA:1.10.720.30 11 67 5.1E-31 T 28-03-2018 IPR003034 SAP domain CO704_RS15740 3f33714e1afd51216b743645e598f5e8 551 Gene3D G3DSA:3.40.50.300 1 346 4.1E-14 T 28-03-2018 CO704_RS15740 3f33714e1afd51216b743645e598f5e8 551 SUPERFAMILY SSF52540 233 338 6.23E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15740 3f33714e1afd51216b743645e598f5e8 551 SUPERFAMILY SSF52540 1 162 6.23E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15740 3f33714e1afd51216b743645e598f5e8 551 Pfam PF11398 Protein of unknown function (DUF2813) 1 374 1.7E-151 T 28-03-2018 IPR022602 Protein of unknown function DUF2813 CO704_RS10605 4cede7495661b01697c7f438f853d780 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 1.2E-59 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CO704_RS04845 d3bf4a54056bf058c23a527ec798e9a3 327 Gene3D G3DSA:3.40.50.2300 26 143 1.8E-19 T 28-03-2018 CO704_RS04845 d3bf4a54056bf058c23a527ec798e9a3 327 Gene3D G3DSA:3.40.50.2300 144 299 1.6E-13 T 28-03-2018 CO704_RS04845 d3bf4a54056bf058c23a527ec798e9a3 327 SUPERFAMILY SSF53822 27 325 2.83E-64 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS04845 d3bf4a54056bf058c23a527ec798e9a3 327 Pfam PF13407 Periplasmic binding protein domain 30 286 2.2E-53 T 28-03-2018 IPR025997 Periplasmic binding protein CO704_RS11435 94151809196be7139b998d061f2d4455 715 Gene3D G3DSA:2.40.170.20 175 711 1.2E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS11435 94151809196be7139b998d061f2d4455 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 164 1.2E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11435 94151809196be7139b998d061f2d4455 715 Gene3D G3DSA:2.170.130.10 30 174 2.4E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS11435 94151809196be7139b998d061f2d4455 715 Pfam PF00593 TonB dependent receptor 256 711 3.6E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS11435 94151809196be7139b998d061f2d4455 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 710 3.8E-67 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS11435 94151809196be7139b998d061f2d4455 715 SUPERFAMILY SSF56935 32 712 1.34E-121 T 28-03-2018 CO704_RS21355 6da3f23da6a6b7329d19f4f1ef8097c4 105 SUPERFAMILY SSF103481 5 103 8.89E-22 T 28-03-2018 CO704_RS21355 6da3f23da6a6b7329d19f4f1ef8097c4 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.1E-33 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CO704_RS14825 1bcda69b668cec0fffa5c74e6c82b3d1 109 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 1.2E-32 T 28-03-2018 IPR014491 Curli production protein CsgC CO704_RS18250 bbbc9452178bdf089e3ea2c9141ad932 454 SUPERFAMILY SSF103473 12 391 1.05E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS18250 bbbc9452178bdf089e3ea2c9141ad932 454 Gene3D G3DSA:1.20.1250.20 202 403 3.0E-17 T 28-03-2018 CO704_RS18250 bbbc9452178bdf089e3ea2c9141ad932 454 Pfam PF07690 Major Facilitator Superfamily 20 263 1.1E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS18250 bbbc9452178bdf089e3ea2c9141ad932 454 Gene3D G3DSA:1.20.1250.20 5 198 2.3E-33 T 28-03-2018 CO704_RS24535 0b32bd374169c9bbe262ae07f98997d4 153 SUPERFAMILY SSF55729 1 124 1.92E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS24535 0b32bd374169c9bbe262ae07f98997d4 153 Gene3D G3DSA:3.40.630.30 1 143 1.0E-20 T 28-03-2018 CO704_RS24535 0b32bd374169c9bbe262ae07f98997d4 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 131 8.9E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS21270 377873fd226812a61fbf376c5ff2a5b9 289 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 289 143.877 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS21270 377873fd226812a61fbf376c5ff2a5b9 289 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 275 2.2E-69 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS21270 377873fd226812a61fbf376c5ff2a5b9 289 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 16 278 8.0E-94 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 Gene3D G3DSA:1.10.287.950 316 511 5.9E-48 T 28-03-2018 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 Gene3D G3DSA:1.10.287.950 73 315 1.6E-15 T 28-03-2018 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 473 6.4E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 SMART SM00283 260 507 8.8E-93 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 SUPERFAMILY SSF58104 229 508 8.89E-70 T 28-03-2018 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 18 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 180 200 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS14145 e471511a67ca5c751851ce66f7b4b2ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 2.9E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS24630 fa1849fba5d36d2d8765cc40c1e54760 218 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 145 1.3E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS24630 fa1849fba5d36d2d8765cc40c1e54760 218 Gene3D G3DSA:2.160.10.10 10 212 4.9E-45 T 28-03-2018 CO704_RS24630 fa1849fba5d36d2d8765cc40c1e54760 218 SUPERFAMILY SSF51161 12 198 1.8E-44 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS24630 fa1849fba5d36d2d8765cc40c1e54760 218 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 120 148 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS24630 fa1849fba5d36d2d8765cc40c1e54760 218 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 11 206 1.2E-74 T 28-03-2018 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 PIRSF PIRSF000112 1 355 4.1E-92 T 28-03-2018 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 Gene3D G3DSA:1.20.1090.10 156 359 1.4E-40 T 28-03-2018 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 Gene3D G3DSA:3.40.50.1970 1 155 2.4E-30 T 28-03-2018 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 146 174 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 SUPERFAMILY SSF56796 2 351 7.2E-84 T 28-03-2018 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 237 257 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CO704_RS21800 2d9594ba4280f1eca341a307af144bc1 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 343 4.5E-64 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 Gene3D G3DSA:3.30.70.1350 211 288 5.1E-10 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 Gene3D G3DSA:1.20.1510.10 13 209 2.1E-60 T 28-03-2018 CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 SUPERFAMILY SSF161111 12 210 9.29E-60 T 28-03-2018 CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 Pfam PF01545 Cation efflux family 17 209 1.4E-50 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 288 3.2E-95 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CO704_RS16575 ae836d982e58a7b4e534f164fc054ff2 311 SUPERFAMILY SSF160240 225 287 1.83E-8 T 28-03-2018 CO704_RS10075 71ed250bddd945871daf6bd8ed17cf99 160 Pfam PF05069 Phage virion morphogenesis family 13 154 2.2E-16 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS10075 71ed250bddd945871daf6bd8ed17cf99 160 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 13 119 2.2E-11 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS12350 71ed250bddd945871daf6bd8ed17cf99 160 Pfam PF05069 Phage virion morphogenesis family 13 154 2.2E-16 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS12350 71ed250bddd945871daf6bd8ed17cf99 160 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 13 119 2.2E-11 T 28-03-2018 IPR006522 Phage virion morphogensis protein CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 8.1E-47 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 Gene3D G3DSA:1.10.10.10 1 142 2.6E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 Pfam PF02082 Transcriptional regulator 1 83 2.5E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.0E-66 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 SUPERFAMILY SSF46785 2 133 4.23E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CO704_RS04905 8823d42244d2c0b1a9cfc7977b3b8329 162 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 162 46.813 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CO704_RS13160 498ea54a8fefa7848ab8a6d192a64c12 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 2.2E-119 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CO704_RS13160 498ea54a8fefa7848ab8a6d192a64c12 447 SMART SM01150 11 401 1.3E-229 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CO704_RS02705 94e46e2003cb9ff6e9e0e8306c3ae49f 406 Pfam PF11922 Domain of unknown function (DUF3440) 345 388 2.7E-9 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 CO704_RS02705 94e46e2003cb9ff6e9e0e8306c3ae49f 406 Pfam PF11922 Domain of unknown function (DUF3440) 238 340 1.0E-26 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 CO704_RS02705 94e46e2003cb9ff6e9e0e8306c3ae49f 406 SUPERFAMILY SSF52402 11 233 2.51E-37 T 28-03-2018 CO704_RS02705 94e46e2003cb9ff6e9e0e8306c3ae49f 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 236 2.8E-15 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CO704_RS02705 94e46e2003cb9ff6e9e0e8306c3ae49f 406 Gene3D G3DSA:3.40.50.620 10 234 7.0E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.184 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 SUPERFAMILY SSF75620 12 353 1.7E-136 T 28-03-2018 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 9.1E-175 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 SMART SM00937 63 178 1.5E-70 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 Pfam PF00472 RF-1 domain 216 321 1.1E-40 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 Gene3D G3DSA:3.30.160.20 209 291 9.7E-33 T 28-03-2018 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 Pfam PF03462 PCRF domain 12 203 5.4E-75 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CO704_RS09670 0c73829d49d881413d2f3a6a172adc42 360 Gene3D G3DSA:1.20.58.410 3 100 2.2E-19 T 28-03-2018 CO704_RS05220 80b7fb9d24e6f3888dc893aad0b88683 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 1.5E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS05220 80b7fb9d24e6f3888dc893aad0b88683 331 Gene3D G3DSA:1.10.3470.10 41 331 1.9E-31 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS07110 d65fb6064e40f0451de6d672050afd58 877 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 196 223 0.0025 T 28-03-2018 IPR006530 YD repeat CO704_RS07110 d65fb6064e40f0451de6d672050afd58 877 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 543 622 6.3E-26 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS18720 709f6d32ad5bf9867bf6e370bebb8d15 72 SUPERFAMILY SSF47336 2 71 3.8E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS18720 709f6d32ad5bf9867bf6e370bebb8d15 72 Gene3D G3DSA:1.10.1200.10 1 72 1.3E-10 T 28-03-2018 CO704_RS18720 709f6d32ad5bf9867bf6e370bebb8d15 72 Pfam PF00550 Phosphopantetheine attachment site 3 68 2.4E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CO704_RS19080 ed9aa2b5006b8ea7fb15da192b17b4eb 254 SUPERFAMILY SSF53335 77 202 6.27E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CO704_RS19080 ed9aa2b5006b8ea7fb15da192b17b4eb 254 Gene3D G3DSA:3.40.50.150 50 210 7.3E-18 T 28-03-2018 CO704_RS19080 ed9aa2b5006b8ea7fb15da192b17b4eb 254 Pfam PF08241 Methyltransferase domain 71 125 2.9E-9 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CO704_RS11410 800c22af9debd7cf224acf2bae79bbda 375 SUPERFAMILY SSF111369 55 292 1.44E-52 T 28-03-2018 CO704_RS11410 800c22af9debd7cf224acf2bae79bbda 375 Gene3D G3DSA:1.20.1600.10 26 292 9.6E-22 T 28-03-2018 CO704_RS11410 800c22af9debd7cf224acf2bae79bbda 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 285 1.6E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS11410 800c22af9debd7cf224acf2bae79bbda 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 366 1.2E-73 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS01415 5802f3061c71bf213c16589e55913d8a 334 Gene3D G3DSA:3.90.420.10 64 334 2.2E-61 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS01415 5802f3061c71bf213c16589e55913d8a 334 SUPERFAMILY SSF56524 77 330 3.14E-93 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS01415 5802f3061c71bf213c16589e55913d8a 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 334 55.801 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CO704_RS01415 5802f3061c71bf213c16589e55913d8a 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 267 3.3E-29 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CO704_RS03815 862fb27ee9ce95a128898dd4b90ab62e 322 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 229 321 3.7E-42 T 28-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS03815 862fb27ee9ce95a128898dd4b90ab62e 322 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 174 3.5E-69 T 28-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS03815 862fb27ee9ce95a128898dd4b90ab62e 322 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 4 322 1.3E-179 T 28-03-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CO704_RS23615 02e32f50a44e476ef924cc91d2be0bb1 79 Gene3D G3DSA:1.20.5.370 13 47 3.5E-14 T 28-03-2018 CO704_RS23615 02e32f50a44e476ef924cc91d2be0bb1 79 Gene3D G3DSA:1.20.5.370 48 79 1.2E-9 T 28-03-2018 CO704_RS23615 02e32f50a44e476ef924cc91d2be0bb1 79 Pfam PF06005 Cell division protein ZapB 1 78 6.4E-27 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CO704_RS23615 02e32f50a44e476ef924cc91d2be0bb1 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.24 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.9E-20 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 SUPERFAMILY SSF48498 85 202 4.08E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.4E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.4E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 SUPERFAMILY SSF46689 1 68 2.1E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 3.0E-43 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CO704_RS05365 ab3073dd41533a8055f06ee4911cab6f 212 Gene3D G3DSA:1.10.357.10 1 211 1.7E-38 T 28-03-2018 CO704_RS13310 ccc395d617755cfac9334bd16cc3a9b9 153 Gene3D G3DSA:3.40.630.30 1 147 1.8E-23 T 28-03-2018 CO704_RS13310 ccc395d617755cfac9334bd16cc3a9b9 153 Pfam PF00583 Acetyltransferase (GNAT) family 39 140 3.9E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS13310 ccc395d617755cfac9334bd16cc3a9b9 153 SUPERFAMILY SSF55729 4 150 6.52E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 3.8E-183 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 8.2E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 8.2E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 8.2E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 8.2E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 8.2E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06600 c21edabab818c38155bc799b7ea8f37b 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 1.5E-68 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS25195 6b0731c382ea4e6e0e9d4cdf19260e58 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 63 9.7E-6 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CO704_RS25195 6b0731c382ea4e6e0e9d4cdf19260e58 75 SUPERFAMILY SSF143120 1 70 9.16E-9 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CO704_RS09365 17d64ec358eeddf1584e8bc8c960068e 186 Pfam PF03358 NADPH-dependent FMN reductase 5 149 1.1E-30 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CO704_RS09365 17d64ec358eeddf1584e8bc8c960068e 186 SUPERFAMILY SSF52218 5 172 4.01E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS09365 17d64ec358eeddf1584e8bc8c960068e 186 Gene3D G3DSA:3.40.50.360 1 186 9.0E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS04520 533f77fe5e385f623439a35d88e105bb 233 Pfam PF03942 DTW domain 30 214 5.8E-43 T 28-03-2018 IPR005636 DTW CO704_RS04520 533f77fe5e385f623439a35d88e105bb 233 SMART SM01144 27 219 1.5E-72 T 28-03-2018 IPR005636 DTW CO704_RS15065 5f2e104d7aca0fedf7401d4d62924a79 332 SUPERFAMILY SSF81345 5 331 5.89E-73 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS15065 5f2e104d7aca0fedf7401d4d62924a79 332 Gene3D G3DSA:1.10.3470.10 3 332 7.0E-63 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS15065 5f2e104d7aca0fedf7401d4d62924a79 332 Pfam PF01032 FecCD transport family 17 331 1.7E-81 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS07040 0c5cf4b0150c07a3d2dfe448eb38deb7 795 Pfam PF16967 E-set like domain 256 322 4.8E-22 T 28-03-2018 IPR032636 Pilus assembly protein, E-set like domain CO704_RS07040 0c5cf4b0150c07a3d2dfe448eb38deb7 795 Pfam PF15976 CS1-pili formation C-terminal 699 793 5.9E-12 T 28-03-2018 IPR031917 Pilus assembly protein, C-terminal domain CO704_RS07040 0c5cf4b0150c07a3d2dfe448eb38deb7 795 Gene3D G3DSA:2.60.40.10 674 786 0.0012 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11315 b7e44e9d4d29bb6f47588ddca544631e 680 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 58 505 2.9E-180 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CO704_RS11315 b7e44e9d4d29bb6f47588ddca544631e 680 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CO704_RS11315 b7e44e9d4d29bb6f47588ddca544631e 680 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 504 5.4E-178 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CO704_RS01160 4875f4a718aadd5f8f4b1e95523198fc 101 Gene3D G3DSA:4.10.830.10 1 101 9.4E-32 T 28-03-2018 CO704_RS01160 4875f4a718aadd5f8f4b1e95523198fc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.8E-25 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01160 4875f4a718aadd5f8f4b1e95523198fc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.296 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CO704_RS01160 4875f4a718aadd5f8f4b1e95523198fc 101 SUPERFAMILY SSF57716 2 101 9.27E-36 T 28-03-2018 CO704_RS01160 4875f4a718aadd5f8f4b1e95523198fc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CO704_RS14100 6019ddaeec11d9d019d4ff606a7164a3 92 Pfam PF10798 Biofilm development protein YmgB/AriR 33 91 1.7E-23 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CO704_RS14100 6019ddaeec11d9d019d4ff606a7164a3 92 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 34 92 1.0E-8 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CO704_RS06410 7bac5737c617c02924e9c3b1b7241247 316 Gene3D G3DSA:3.40.50.1360 54 314 1.5E-32 T 28-03-2018 CO704_RS06410 7bac5737c617c02924e9c3b1b7241247 316 SUPERFAMILY SSF100950 58 314 5.69E-60 T 28-03-2018 CO704_RS06410 7bac5737c617c02924e9c3b1b7241247 316 Gene3D G3DSA:1.10.10.60 1 53 4.9E-16 T 28-03-2018 CO704_RS06410 7bac5737c617c02924e9c3b1b7241247 316 Pfam PF04198 Putative sugar-binding domain 58 313 3.4E-65 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CO704_RS06410 7bac5737c617c02924e9c3b1b7241247 316 Pfam PF12802 MarR family 22 55 1.5E-6 T 28-03-2018 CO704_RS16640 3de649c0f652949b9232b0a87d7f5803 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 5.5E-40 T 28-03-2018 IPR011846 Cyd operon protein YbgE CO704_RS16640 3de649c0f652949b9232b0a87d7f5803 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 1.5E-32 T 28-03-2018 IPR011846 Cyd operon protein YbgE CO704_RS12205 015f6b85d1b423f963d6e2770eb1d6b4 82 SUPERFAMILY SSF47413 5 75 1.69E-24 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS12205 015f6b85d1b423f963d6e2770eb1d6b4 82 Gene3D G3DSA:1.10.260.40 3 76 2.0E-12 T 28-03-2018 CO704_RS12205 015f6b85d1b423f963d6e2770eb1d6b4 82 Pfam PF13693 Winged helix-turn-helix DNA-binding 10 75 1.2E-23 T 28-03-2018 CO704_RS18965 ec1bcc90ee9bab0198ca11faa7355373 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.458 T 28-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CO704_RS18965 ec1bcc90ee9bab0198ca11faa7355373 152 Gene3D G3DSA:3.40.50.2020 1 152 1.1E-26 T 28-03-2018 CO704_RS18965 ec1bcc90ee9bab0198ca11faa7355373 152 SUPERFAMILY SSF53271 4 143 8.26E-32 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS18965 ec1bcc90ee9bab0198ca11faa7355373 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 2.0E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 Pfam PF07972 NrdI Flavodoxin like 5 122 4.4E-45 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 SUPERFAMILY SSF52218 2 131 3.39E-25 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.2E-54 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 Gene3D G3DSA:3.40.50.360 3 131 2.4E-27 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 PIRSF PIRSF005087 1 136 1.5E-53 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CO704_RS03970 dfdb12cfb3cea8782f92c1f2aa025ac3 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 35.73 T 28-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CO704_RS19545 a1f5af359c7275fad4be3a2ba6ccdb34 187 Gene3D G3DSA:3.40.80.10 1 187 2.7E-53 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS19545 a1f5af359c7275fad4be3a2ba6ccdb34 187 SUPERFAMILY SSF55846 2 182 7.33E-69 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS19545 a1f5af359c7275fad4be3a2ba6ccdb34 187 SMART SM00644 16 166 6.7E-55 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS19545 a1f5af359c7275fad4be3a2ba6ccdb34 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 51 167 2.1E-26 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.739 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 SUPERFAMILY SSF53383 2 425 1.97E-138 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 Gene3D G3DSA:3.40.640.10 59 305 2.1E-78 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.8E-202 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 Pfam PF00202 Aminotransferase class-III 32 396 1.9E-79 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CO704_RS19370 d6013541c0295dcb3b17f7a9a813b457 426 Gene3D G3DSA:3.90.1150.10 306 426 1.6E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS12385 ce9b99e684776fa41ed7008ecf055d25 479 PIRSF PIRSF007349 1 479 1.8E-125 T 28-03-2018 IPR007067 Tail sheath protein CO704_RS12385 ce9b99e684776fa41ed7008ecf055d25 479 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 210 367 1.4E-11 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CO704_RS12385 ce9b99e684776fa41ed7008ecf055d25 479 Pfam PF17482 Phage tail sheath C-terminal domain 376 478 1.7E-11 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CO704_RS03305 d156a3557c04a435c19ffa65cceb998d 149 Gene3D G3DSA:3.40.630.30 3 149 2.4E-18 T 28-03-2018 CO704_RS03305 d156a3557c04a435c19ffa65cceb998d 149 Pfam PF00583 Acetyltransferase (GNAT) family 14 128 1.6E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS03305 d156a3557c04a435c19ffa65cceb998d 149 SUPERFAMILY SSF55729 10 137 3.49E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS16565 77e7ffabef4ee0a71ff9ee4345aeae38 350 Pfam PF00793 DAHP synthetase I family 38 337 6.7E-108 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CO704_RS16565 77e7ffabef4ee0a71ff9ee4345aeae38 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 8.5E-178 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS16565 77e7ffabef4ee0a71ff9ee4345aeae38 350 SUPERFAMILY SSF51569 7 348 1.26E-137 T 28-03-2018 CO704_RS16565 77e7ffabef4ee0a71ff9ee4345aeae38 350 Gene3D G3DSA:3.20.20.70 8 350 1.1E-133 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS16565 77e7ffabef4ee0a71ff9ee4345aeae38 350 PIRSF PIRSF001361 1 350 3.3E-163 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CO704_RS22640 ad3f0dd48f5f876b0e784985e5026417 170 SUPERFAMILY SSF46785 12 145 1.85E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22640 ad3f0dd48f5f876b0e784985e5026417 170 Pfam PF01475 Ferric uptake regulator family 20 138 5.9E-16 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CO704_RS22640 ad3f0dd48f5f876b0e784985e5026417 170 Gene3D G3DSA:1.10.10.10 1 91 2.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS10495 18b379f3cfc5ce565d2a5b0e52d724c4 355 Pfam PF05128 Domain of unknown function (DUF697) 184 343 1.2E-54 T 28-03-2018 IPR021147 Protein of unknown function DUF697 CO704_RS10495 18b379f3cfc5ce565d2a5b0e52d724c4 355 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 349 38.608 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 CO704_RS10495 18b379f3cfc5ce565d2a5b0e52d724c4 355 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 343 1.2E-137 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 CO704_RS06480 395683417b684125f91fad9fa5e31068 463 Pfam PF03611 PTS system sugar-specific permease component 12 408 8.1E-149 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 9.4E-41 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 1.3E-56 T 28-03-2018 IPR022161 DNA helicase IV, N-terminal domain CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 SUPERFAMILY SSF52540 195 344 1.03E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 SUPERFAMILY SSF52540 385 674 1.03E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 Gene3D G3DSA:3.40.50.300 186 499 3.1E-44 T 28-03-2018 CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 Gene3D G3DSA:3.40.50.300 500 680 8.6E-25 T 28-03-2018 CO704_RS15350 6c84734bb5dbb4f14f3d81656cd15d1f 684 Pfam PF13361 UvrD-like helicase C-terminal domain 544 663 1.5E-14 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CO704_RS22225 c1aee30b42e47369be9e872da79a19b7 207 Pfam PF13460 NAD(P)H-binding 8 190 5.8E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22225 c1aee30b42e47369be9e872da79a19b7 207 SUPERFAMILY SSF51735 4 202 1.61E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS22225 c1aee30b42e47369be9e872da79a19b7 207 Gene3D G3DSA:3.40.50.720 1 200 2.8E-21 T 28-03-2018 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 170 189 9.8E-22 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 61 81 9.8E-22 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 92 109 9.8E-22 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 113 132 9.8E-22 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 5 195 32.273 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 114 127 - T 28-03-2018 IPR033135 ClpP, histidine active site CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 SUPERFAMILY SSF52096 25 198 1.69E-57 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 Gene3D G3DSA:3.90.226.10 24 195 2.8E-36 T 28-03-2018 CO704_RS00410 b8e523737fc7f308df8b258c19f83ef0 201 Pfam PF00574 Clp protease 24 193 2.0E-65 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CO704_RS18335 702399a06622748c9f52ca9444786443 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 104 1.4E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS18335 702399a06622748c9f52ca9444786443 121 SUPERFAMILY SSF54593 2 120 2.95E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS18335 702399a06622748c9f52ca9444786443 121 Gene3D G3DSA:3.10.180.10 3 121 2.3E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS12600 3b529b1cf5f7869c4eee6c65de0f2dd9 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 4.4E-103 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS12600 3b529b1cf5f7869c4eee6c65de0f2dd9 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 236 38.298 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS12600 3b529b1cf5f7869c4eee6c65de0f2dd9 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 2.0E-81 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS01040 1cb5f1c4674a4c37f65c54a0adebdd94 128 Gene3D G3DSA:3.40.1260.10 1 128 3.0E-31 T 28-03-2018 CO704_RS01040 1cb5f1c4674a4c37f65c54a0adebdd94 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.8E-27 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CO704_RS01040 1cb5f1c4674a4c37f65c54a0adebdd94 128 SUPERFAMILY SSF75169 1 128 1.58E-36 T 28-03-2018 IPR027396 DsrEFH-like CO704_RS01040 1cb5f1c4674a4c37f65c54a0adebdd94 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 39.415 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CO704_RS01040 1cb5f1c4674a4c37f65c54a0adebdd94 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 5.9E-52 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CO704_RS17750 345632986e2425d23a820b774fb9737a 203 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 154 1.2E-8 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS17750 345632986e2425d23a820b774fb9737a 203 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 153 3.5E-19 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS18535 1c871645a581108d64426b3499023543 392 SUPERFAMILY SSF111369 189 264 5.49E-7 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 SUPERFAMILY SSF111369 118 156 5.49E-7 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 285 5.0E-19 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS18535 1c871645a581108d64426b3499023543 392 Gene3D G3DSA:1.10.287.470 134 177 1.1E-8 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 SUPERFAMILY SSF111369 55 137 6.8E-12 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 Gene3D G3DSA:2.40.50.100 55 133 4.0E-17 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 Gene3D G3DSA:2.40.50.100 203 392 3.0E-6 T 28-03-2018 CO704_RS18535 1c871645a581108d64426b3499023543 392 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 341 3.8E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 Pfam PF01740 STAS domain 453 556 3.7E-10 T 28-03-2018 IPR002645 STAS domain CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 Pfam PF00916 Sulfate permease family 29 412 5.3E-75 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 SUPERFAMILY SSF52091 454 558 3.14E-12 T 28-03-2018 IPR002645 STAS domain CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 Gene3D G3DSA:3.30.750.24 442 560 8.5E-14 T 28-03-2018 IPR002645 STAS domain CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 28-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CO704_RS09640 9062aab993b6b63678b4db76c2086ef6 560 TIGRFAM TIGR00815 sulP: sulfate permease 18 556 9.0E-139 T 28-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CO704_RS20865 59a16cb8498145a32276844934ed3b70 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 1.0E-15 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS20865 59a16cb8498145a32276844934ed3b70 91 Gene3D G3DSA:3.30.1660.10 24 91 3.9E-18 T 28-03-2018 IPR025543 Dodecin-like CO704_RS20865 59a16cb8498145a32276844934ed3b70 91 SUPERFAMILY SSF159871 2 91 2.22E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Gene3D G3DSA:3.40.50.2300 65 174 1.2E-23 T 28-03-2018 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 28-03-2018 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Pfam PF13377 Periplasmic binding protein-like domain 176 336 5.0E-34 T 28-03-2018 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 SMART SM00354 8 78 4.5E-36 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 2.2E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 SUPERFAMILY SSF47413 8 66 7.5E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 8.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 8.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Gene3D G3DSA:3.40.50.2300 175 339 4.2E-46 T 28-03-2018 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 SUPERFAMILY SSF53822 68 337 1.2E-78 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Gene3D G3DSA:1.10.260.40 24 64 1.4E-25 T 28-03-2018 CO704_RS07005 49987501c5018e382623a3bdac8286b8 351 Gene3D G3DSA:1.10.10.10 4 23 0.024 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS05820 b819e99162b4d86bf88ed1cc75328703 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 21 279 1.3E-49 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CO704_RS05820 b819e99162b4d86bf88ed1cc75328703 283 Gene3D G3DSA:3.40.1190.20 18 278 6.6E-48 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05820 b819e99162b4d86bf88ed1cc75328703 283 SUPERFAMILY SSF53613 22 278 1.01E-57 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS05820 b819e99162b4d86bf88ed1cc75328703 283 Pfam PF08543 Phosphomethylpyrimidine kinase 72 268 4.0E-20 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CO704_RS20800 2894e8395e3c86eccc3006736cacd7ea 131 SUPERFAMILY SSF46785 16 123 1.92E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20800 2894e8395e3c86eccc3006736cacd7ea 131 Pfam PF01638 HxlR-like helix-turn-helix 34 121 3.8E-31 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CO704_RS20800 2894e8395e3c86eccc3006736cacd7ea 131 Gene3D G3DSA:1.10.10.10 4 131 5.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01490 1112948389225e608bc75254268d7f33 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CO704_RS01490 1112948389225e608bc75254268d7f33 484 Pfam PF00171 Aldehyde dehydrogenase family 26 478 2.1E-171 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CO704_RS01490 1112948389225e608bc75254268d7f33 484 SUPERFAMILY SSF53720 9 482 6.81E-170 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS01490 1112948389225e608bc75254268d7f33 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 1.4E-201 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CO704_RS01490 1112948389225e608bc75254268d7f33 484 Gene3D G3DSA:3.40.309.10 274 465 8.2E-70 T 28-03-2018 CO704_RS01490 1112948389225e608bc75254268d7f33 484 Gene3D G3DSA:3.40.605.10 8 273 2.5E-101 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 SUPERFAMILY SSF109604 3 185 1.41E-45 T 28-03-2018 CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 SMART SM00471 26 151 7.8E-7 T 28-03-2018 IPR003607 HD/PDEase domain CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 Pfam PF13023 HD domain 11 161 7.7E-17 T 28-03-2018 IPR006674 HD domain CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 6.0E-43 T 28-03-2018 CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 44.285 T 28-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CO704_RS06525 cccbe8fa727abf01f38360f5d476acf1 199 Gene3D G3DSA:1.10.3210.10 1 199 7.3E-54 T 28-03-2018 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 SUPERFAMILY SSF48452 310 439 1.61E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 Pfam PF01435 Peptidase family M48 72 259 2.7E-25 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 41.701 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 Gene3D G3DSA:1.25.20.10 285 485 1.2E-13 T 28-03-2018 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 Gene3D G3DSA:3.30.2010.10 67 154 4.0E-16 T 28-03-2018 CO704_RS05630 ea08662619e94b80e77d4c9520b3bdc2 487 Pfam PF14559 Tetratricopeptide repeat 354 418 1.4E-7 T 28-03-2018 CO704_RS12545 e52987b0c88bd9f2f310e687bd3e033a 180 Pfam PF13508 Acetyltransferase (GNAT) domain 60 133 2.1E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS12545 e52987b0c88bd9f2f310e687bd3e033a 180 SUPERFAMILY SSF55729 9 139 1.38E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS12545 e52987b0c88bd9f2f310e687bd3e033a 180 Gene3D G3DSA:3.40.630.30 3 149 3.7E-18 T 28-03-2018 CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 Gene3D G3DSA:1.20.1250.20 255 503 6.7E-32 T 28-03-2018 CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 Gene3D G3DSA:1.20.1250.20 13 202 5.6E-35 T 28-03-2018 CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 2.6E-213 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 SUPERFAMILY SSF103473 475 500 3.27E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 SUPERFAMILY SSF103473 9 196 3.27E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 SUPERFAMILY SSF103473 251 423 3.27E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS03920 cd1030287531dfc96c4d84f69a95aa4d 512 Pfam PF07690 Major Facilitator Superfamily 19 413 1.6E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 PIRSF PIRSF000441 2 160 3.2E-44 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 140 4.7E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 116 144 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 Gene3D G3DSA:2.160.10.10 28 159 5.7E-24 T 28-03-2018 CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 17 161 2.7E-89 T 28-03-2018 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 CO704_RS07455 f048f9458a50eb81b026fdf38a35cf48 161 SUPERFAMILY SSF51161 11 157 7.21E-31 T 28-03-2018 IPR011004 Trimeric LpxA-like CO704_RS24395 35482345ac0f889f11cce831ccc6435e 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 231 8.5E-93 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 CO704_RS21565 8439d6e3a8f8252380308a309673ebf9 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.5E-40 T 28-03-2018 IPR008878 Transposase IS66, Orf2 CO704_RS21705 8439d6e3a8f8252380308a309673ebf9 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.5E-40 T 28-03-2018 IPR008878 Transposase IS66, Orf2 CO704_RS18445 4b6a6570465f3c91f07acb909e62ebf1 97 Gene3D G3DSA:2.60.120.10 3 93 2.7E-37 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS18445 4b6a6570465f3c91f07acb909e62ebf1 97 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 7.4E-36 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CO704_RS18445 4b6a6570465f3c91f07acb909e62ebf1 97 SUPERFAMILY SSF51182 1 94 2.97E-35 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS18445 4b6a6570465f3c91f07acb909e62ebf1 97 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 26.899 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 Pfam PF03170 Bacterial cellulose synthase subunit 60 667 3.3E-192 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 708 728 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 297 318 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 460 479 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 86 107 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 379 400 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 217 240 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS24450 557bcd9ff471510b08c1e903d2da783c 779 PRINTS PR01440 Cellulose synthase subunit B signature 508 527 5.6E-33 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CO704_RS11650 25548a722e3737ebd4b152de2b5fd80c 341 SUPERFAMILY SSF52540 4 241 1.66E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS11650 25548a722e3737ebd4b152de2b5fd80c 341 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS11650 25548a722e3737ebd4b152de2b5fd80c 341 SMART SM00382 28 211 3.7E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS11650 25548a722e3737ebd4b152de2b5fd80c 341 Gene3D G3DSA:3.40.50.300 1 260 8.5E-78 T 28-03-2018 CO704_RS11650 25548a722e3737ebd4b152de2b5fd80c 341 Pfam PF00005 ABC transporter 19 161 2.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS23655 45126637509624f8c4de12df70a58454 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 431 1.8E-28 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CO704_RS04355 ef3cf48babcfcc25d93c528279e644c8 96 Pfam PF03658 RnfH family Ubiquitin 5 87 1.3E-33 T 28-03-2018 IPR005346 RnfH protein CO704_RS04355 ef3cf48babcfcc25d93c528279e644c8 96 SUPERFAMILY SSF54285 5 79 1.44E-26 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CO704_RS04355 ef3cf48babcfcc25d93c528279e644c8 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.4 T 28-03-2018 IPR005346 RnfH protein CO704_RS04355 ef3cf48babcfcc25d93c528279e644c8 96 Gene3D G3DSA:3.10.20.280 1 88 2.5E-33 T 28-03-2018 IPR005346 RnfH protein CO704_RS20665 67de4081fb5d146f0363cd35426bf778 433 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 1.4E-122 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS20665 67de4081fb5d146f0363cd35426bf778 433 SUPERFAMILY SSF103473 3 414 4.32E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS20665 67de4081fb5d146f0363cd35426bf778 433 Gene3D G3DSA:1.20.1250.20 1 202 1.5E-39 T 28-03-2018 CO704_RS20665 67de4081fb5d146f0363cd35426bf778 433 Pfam PF07690 Major Facilitator Superfamily 16 287 7.6E-50 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS20665 67de4081fb5d146f0363cd35426bf778 433 Gene3D G3DSA:1.20.1250.20 213 417 5.3E-22 T 28-03-2018 CO704_RS25955 943f99fa2a40f6446c8de3d6fe357ab4 81 SUPERFAMILY SSF46785 2 74 1.11E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25955 943f99fa2a40f6446c8de3d6fe357ab4 81 Gene3D G3DSA:1.10.10.10 1 58 7.0E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 3.9E-60 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.1E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.1E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.1E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 31.207 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 2.9E-46 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS01245 1f54a4726225ee102e6f2b3504be20c4 137 SUPERFAMILY SSF81330 12 127 3.92E-36 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 SUPERFAMILY SSF117892 49 183 1.31E-41 T 28-03-2018 IPR001107 Band 7 domain CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 SMART SM00244 18 176 6.9E-58 T 28-03-2018 IPR001107 Band 7 domain CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 Pfam PF01145 SPFH domain / Band 7 family 22 203 3.0E-32 T 28-03-2018 IPR001107 Band 7 domain CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 PRINTS PR00721 Stomatin signature 108 125 2.3E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 PRINTS PR00721 Stomatin signature 152 170 2.3E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 PRINTS PR00721 Stomatin signature 171 192 2.3E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 PRINTS PR00721 Stomatin signature 73 94 2.3E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 PRINTS PR00721 Stomatin signature 128 151 2.3E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site CO704_RS05485 d6bc625d56385d03120af19c401576f0 304 Pfam PF16200 C-terminal region of band_7 237 296 8.8E-8 T 28-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Pfam PF00817 impB/mucB/samB family 5 148 2.3E-34 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Gene3D G3DSA:3.30.70.270 115 172 2.6E-10 T 28-03-2018 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Gene3D G3DSA:3.30.70.270 37 114 3.0E-16 T 28-03-2018 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Gene3D G3DSA:3.30.1490.100 246 361 3.9E-24 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Pfam PF13438 Domain of unknown function (DUF4113) 370 420 9.5E-22 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Pfam PF11798 IMS family HHH motif 170 199 1.8E-6 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 SUPERFAMILY SSF56672 1 236 4.27E-66 T 28-03-2018 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 SUPERFAMILY SSF100879 249 345 1.33E-5 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Gene3D G3DSA:1.10.150.20 173 245 8.7E-17 T 28-03-2018 CO704_RS10575 fad8318677c57453cdb906f0048bf8eb 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 350 1.1E-13 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CO704_RS04220 b5a6e808aabb81445b188ad140bb2488 231 Gene3D G3DSA:1.10.10.10 1 78 1.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25310 32b72971eefe27ab0674ba4342948794 197 Gene3D G3DSA:2.70.50.50 28 196 4.5E-54 T 28-03-2018 CO704_RS25310 32b72971eefe27ab0674ba4342948794 197 SUPERFAMILY SSF81296 28 195 2.52E-62 T 28-03-2018 IPR014756 Immunoglobulin E-set CO704_RS25310 32b72971eefe27ab0674ba4342948794 197 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 192 4.5E-35 T 28-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal CO704_RS16415 3d04a5906f757c0572755cfa14800805 150 SUPERFAMILY SSF54690 6 150 1.7E-54 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS16415 3d04a5906f757c0572755cfa14800805 150 Gene3D G3DSA:3.90.1170.40 2 149 1.3E-55 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS16415 3d04a5906f757c0572755cfa14800805 150 Pfam PF02391 MoaE protein 11 121 8.6E-36 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CO704_RS25930 63e1967e9d90e6b8779f15b5ba7253e9 399 Gene3D G3DSA:3.40.50.300 108 399 2.5E-37 T 28-03-2018 CO704_RS25930 63e1967e9d90e6b8779f15b5ba7253e9 399 Pfam PF13614 AAA domain 111 292 2.8E-26 T 28-03-2018 IPR025669 AAA domain CO704_RS25930 63e1967e9d90e6b8779f15b5ba7253e9 399 SUPERFAMILY SSF52540 109 395 1.59E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS22375 bf237ef70381b00b00d2902f282411ab 155 Pfam PF00583 Acetyltransferase (GNAT) family 37 134 1.5E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS22375 bf237ef70381b00b00d2902f282411ab 155 SUPERFAMILY SSF55729 6 140 6.75E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS22375 bf237ef70381b00b00d2902f282411ab 155 Gene3D G3DSA:3.40.630.30 1 145 2.6E-22 T 28-03-2018 CO704_RS24300 7d44d841027c8c98aa0c55c11bdda818 340 Pfam PF03824 High-affinity nickel-transport protein 41 327 1.3E-89 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CO704_RS24300 7d44d841027c8c98aa0c55c11bdda818 340 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 45 322 2.4E-123 T 28-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 CO704_RS23315 3ea16eb014114617da2ebbc814e581d2 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 1.1E-178 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CO704_RS23315 3ea16eb014114617da2ebbc814e581d2 359 Gene3D G3DSA:3.40.50.2000 172 337 5.0E-6 T 28-03-2018 CO704_RS23315 3ea16eb014114617da2ebbc814e581d2 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 66.536 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CO704_RS12895 f447412b47950306d9e9042bf22c826f 717 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 3.4E-34 T 28-03-2018 IPR025299 CstA, C-terminal domain CO704_RS12895 f447412b47950306d9e9042bf22c826f 717 Pfam PF02554 Carbon starvation protein CstA 34 405 5.9E-161 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CO704_RS14940 f2addf2f3a1c88375bcf4e5f94531fc3 116 PIRSF PIRSF000699 10 116 2.1E-39 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS14940 f2addf2f3a1c88375bcf4e5f94531fc3 116 SUPERFAMILY SSF46973 14 113 2.09E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS14940 f2addf2f3a1c88375bcf4e5f94531fc3 116 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 4.4E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS14940 f2addf2f3a1c88375bcf4e5f94531fc3 116 Gene3D G3DSA:1.20.58.80 15 113 1.3E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CO704_RS19735 bde24bfecd00e615b5d27fc81774d28e 59 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 7 48 1.6E-14 T 28-03-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 CO704_RS20515 9f2edcaa5a9836004a7321e69094ae90 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 93 1.3E-32 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CO704_RS20515 9f2edcaa5a9836004a7321e69094ae90 97 PIRSF PIRSF002736 1 96 3.7E-37 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CO704_RS20515 9f2edcaa5a9836004a7321e69094ae90 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 81 1.0E-22 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CO704_RS20515 9f2edcaa5a9836004a7321e69094ae90 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 85 1.9E-28 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CO704_RS20515 9f2edcaa5a9836004a7321e69094ae90 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 96 26.697 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CO704_RS23170 08a51e7f99c6905008f9158d73b9322a 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 2.1E-55 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CO704_RS23170 08a51e7f99c6905008f9158d73b9322a 206 PIRSF PIRSF006324 1 205 5.6E-53 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS23170 08a51e7f99c6905008f9158d73b9322a 206 Pfam PF01810 LysE type translocator 14 201 3.0E-46 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 Pfam PF07219 HemY protein N-terminus 26 132 2.3E-34 T 28-03-2018 IPR010817 HemY, N-terminal CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 SUPERFAMILY SSF48452 89 192 8.42E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 SUPERFAMILY SSF48452 268 364 8.42E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 Gene3D G3DSA:1.25.40.10 224 388 1.3E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 Gene3D G3DSA:1.25.40.10 78 223 2.2E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS23265 e561458fc4ffa7056b1131fcf071428a 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 1.2E-120 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 SUPERFAMILY SSF50985 200 422 3.05E-37 T 28-03-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 Gene3D G3DSA:2.130.10.30 7 240 1.3E-21 T 28-03-2018 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 Gene3D G3DSA:2.130.10.30 241 424 6.1E-41 T 28-03-2018 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 98 114 3.3E-11 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 369 390 3.3E-11 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 312 330 3.3E-11 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 95 147 3.9E-5 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 373 422 1.1E-7 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS25105 cd2b72940933413fce05ec62c72e43f6 424 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 270 319 9.6E-5 T 28-03-2018 IPR000408 Regulator of chromosome condensation, RCC1 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 Pfam PF02253 Phospholipase A1 43 284 2.1E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 125 144 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 102 118 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 235 252 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 80 97 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 155 169 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 202 220 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 PRINTS PR01486 Bacterial phospholipase A1 protein signature 257 277 1.8E-84 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 Gene3D G3DSA:2.40.230.10 32 288 9.8E-95 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS23185 ebb306339d3ef8e547528a8387205afd 288 SUPERFAMILY SSF56931 39 287 1.06E-88 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CO704_RS13530 37509bb091a1b51e0120fb9b9d61f2c0 114 Gene3D G3DSA:3.40.30.10 1 114 3.5E-31 T 28-03-2018 CO704_RS13530 37509bb091a1b51e0120fb9b9d61f2c0 114 Pfam PF00462 Glutaredoxin 16 80 1.1E-18 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CO704_RS13530 37509bb091a1b51e0120fb9b9d61f2c0 114 SUPERFAMILY SSF52833 2 101 3.7E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS13530 37509bb091a1b51e0120fb9b9d61f2c0 114 PIRSF PIRSF005894 1 107 2.6E-52 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CO704_RS13530 37509bb091a1b51e0120fb9b9d61f2c0 114 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 4.7E-47 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related CO704_RS18290 d13c57edd840246ae5680f2e2b5e6724 324 Pfam PF00248 Aldo/keto reductase family 15 314 4.5E-76 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS18290 d13c57edd840246ae5680f2e2b5e6724 324 SUPERFAMILY SSF51430 2 320 4.19E-100 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS18290 d13c57edd840246ae5680f2e2b5e6724 324 Gene3D G3DSA:3.20.20.100 1 321 2.2E-97 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS07155 fced2a0c901d2a288b72f343e3a5ad0d 246 Pfam PF06629 MltA-interacting protein MipA 27 246 6.1E-36 T 28-03-2018 IPR010583 MltA-interacting MipA CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 Gene3D G3DSA:3.40.190.10 180 265 2.3E-27 T 28-03-2018 CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 SUPERFAMILY SSF46785 7 87 1.27E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 Gene3D G3DSA:1.10.10.10 2 84 8.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 SUPERFAMILY SSF53850 93 300 1.38E-42 T 28-03-2018 CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 Pfam PF03466 LysR substrate binding domain 92 296 1.8E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 4.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS19855 9513d96d5c784271d6b6ab759f459e78 311 Gene3D G3DSA:3.40.190.10 95 179 1.7E-14 T 28-03-2018 CO704_RS12345 8707fb84e111407dcaf6e5f618b7215b 421 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 105 185 1.0E-15 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS12345 8707fb84e111407dcaf6e5f618b7215b 421 Pfam PF04233 Phage Mu protein F like protein 57 184 5.5E-28 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS05330 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS05330 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.354 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS05330 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Pfam PF00444 Ribosomal protein L36 1 41 3.3E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS05330 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 SUPERFAMILY SSF57840 7 41 9.81E-14 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS05330 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.6E-8 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS03900 66b12302659b8ee19cac7ba81b5a46ef 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 228.404 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CO704_RS03900 66b12302659b8ee19cac7ba81b5a46ef 518 SUPERFAMILY SSF55931 4 514 1.83E-205 T 28-03-2018 CO704_RS03900 66b12302659b8ee19cac7ba81b5a46ef 518 Pfam PF04262 Glutamate-cysteine ligase 10 380 2.2E-172 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CO704_RS03900 66b12302659b8ee19cac7ba81b5a46ef 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 4.1E-268 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CO704_RS11190 0cfac992c5d25fefcdf23ec4235c6740 172 Gene3D G3DSA:3.40.630.30 4 159 1.0E-16 T 28-03-2018 CO704_RS11190 0cfac992c5d25fefcdf23ec4235c6740 172 SUPERFAMILY SSF55729 11 141 5.15E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS11190 0cfac992c5d25fefcdf23ec4235c6740 172 Pfam PF13508 Acetyltransferase (GNAT) domain 53 134 1.9E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 Gene3D G3DSA:2.60.300.12 8 114 1.5E-39 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.1E-38 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.045 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CO704_RS19360 cfca5b9b21c00e15262023c3c12bb264 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 9.2E-21 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CO704_RS14900 72ac0f4970d042335f60a45bafb8b7b0 454 Pfam PF02321 Outer membrane efflux protein 57 240 1.2E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS14900 72ac0f4970d042335f60a45bafb8b7b0 454 Pfam PF02321 Outer membrane efflux protein 272 447 5.2E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS14900 72ac0f4970d042335f60a45bafb8b7b0 454 SUPERFAMILY SSF56954 2 451 2.22E-98 T 28-03-2018 CO704_RS14900 72ac0f4970d042335f60a45bafb8b7b0 454 Gene3D G3DSA:1.20.1600.10 17 454 1.9E-88 T 28-03-2018 CO704_RS14900 72ac0f4970d042335f60a45bafb8b7b0 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 451 3.8E-109 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CO704_RS23765 4e69de00a8075396842fe26f83bf36f2 338 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 148 305 4.0E-18 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CO704_RS23765 4e69de00a8075396842fe26f83bf36f2 338 SUPERFAMILY SSF53756 1 332 1.4E-54 T 28-03-2018 CO704_RS23765 4e69de00a8075396842fe26f83bf36f2 338 Gene3D G3DSA:3.40.50.2000 168 337 1.1E-28 T 28-03-2018 CO704_RS23765 4e69de00a8075396842fe26f83bf36f2 338 Gene3D G3DSA:3.40.50.2000 1 156 1.4E-25 T 28-03-2018 CO704_RS15915 a93bf95276a308a3c26e25d32a0eefc6 186 SUPERFAMILY SSF48498 100 180 3.45E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CO704_RS15915 a93bf95276a308a3c26e25d32a0eefc6 186 Gene3D G3DSA:1.10.357.10 1 186 5.4E-33 T 28-03-2018 CO704_RS15915 a93bf95276a308a3c26e25d32a0eefc6 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 3.9E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CO704_RS15915 a93bf95276a308a3c26e25d32a0eefc6 186 SUPERFAMILY SSF46689 4 83 4.09E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS00485 da167570e10f160482ac4f7b188575c0 89 Pfam PF06611 Protein of unknown function (DUF1145) 2 58 1.0E-27 T 28-03-2018 IPR009525 Protein of unknown function DUF1145 CO704_RS12670 2c774ad05b129acba9a679cd2fa3d3ab 141 Hamap MF_00546 Acid shock protein [asr]. 1 141 18.33 T 28-03-2018 IPR023497 Acid shock protein CO704_RS09775 251459659df3b1e94713b2fdfb06dd84 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.8E-22 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS09775 251459659df3b1e94713b2fdfb06dd84 125 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 8.6E-29 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS09775 251459659df3b1e94713b2fdfb06dd84 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.553 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CO704_RS16715 12f89f07cfb18d3ee21b851317e27046 310 SUPERFAMILY SSF50891 173 288 3.03E-11 T 28-03-2018 IPR029000 Cyclophilin-like domain CO704_RS16715 12f89f07cfb18d3ee21b851317e27046 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 1.9E-91 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS16715 12f89f07cfb18d3ee21b851317e27046 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 5.1E-127 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS16715 12f89f07cfb18d3ee21b851317e27046 310 SMART SM00797 23 298 4.4E-143 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CO704_RS00445 0472c50e7531534ab9c37e0a43517f2c 136 SMART SM00530 81 135 1.3E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS00445 0472c50e7531534ab9c37e0a43517f2c 136 SUPERFAMILY SSF47413 81 136 5.35E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS00445 0472c50e7531534ab9c37e0a43517f2c 136 Gene3D G3DSA:1.10.260.40 80 136 6.9E-10 T 28-03-2018 CO704_RS00445 0472c50e7531534ab9c37e0a43517f2c 136 Pfam PF01381 Helix-turn-helix 82 134 5.9E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07285 e1c0e554c43fdc18cc7f1206998c1b72 227 Gene3D G3DSA:3.40.50.360 27 227 3.4E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS07285 e1c0e554c43fdc18cc7f1206998c1b72 227 Pfam PF02525 Flavodoxin-like fold 27 224 2.9E-43 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS07285 e1c0e554c43fdc18cc7f1206998c1b72 227 SUPERFAMILY SSF52218 25 226 5.59E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS07285 e1c0e554c43fdc18cc7f1206998c1b72 227 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 26 227 30.039 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CO704_RS08030 3b649edc94a37a7a4b190305274d1db3 72 Gene3D G3DSA:1.10.260.40 1 71 1.5E-13 T 28-03-2018 CO704_RS08030 3b649edc94a37a7a4b190305274d1db3 72 SUPERFAMILY SSF47413 3 70 1.52E-28 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS08030 3b649edc94a37a7a4b190305274d1db3 72 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 71 5.6E-35 T 28-03-2018 CO704_RS25580 d9d9217ffdb7c0c18d6648b255613188 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 2.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25580 d9d9217ffdb7c0c18d6648b255613188 205 Gene3D G3DSA:1.10.10.10 51 200 1.8E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25580 d9d9217ffdb7c0c18d6648b255613188 205 SUPERFAMILY SSF46894 132 198 6.46E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS25580 d9d9217ffdb7c0c18d6648b255613188 205 SMART SM00421 135 192 9.1E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25825 5f5c5f8c738205fca72964df1860c68b 231 Gene3D G3DSA:1.10.10.10 126 216 1.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25825 5f5c5f8c738205fca72964df1860c68b 231 SUPERFAMILY SSF46894 154 213 4.76E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS25825 5f5c5f8c738205fca72964df1860c68b 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 209 4.5E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS25825 5f5c5f8c738205fca72964df1860c68b 231 SMART SM00421 153 210 0.0022 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS04665 3da0956f242f8742baba003c3a1d4681 292 SUPERFAMILY SSF53474 6 263 2.7E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS04665 3da0956f242f8742baba003c3a1d4681 292 Gene3D G3DSA:3.40.50.1820 3 292 1.0E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS04665 3da0956f242f8742baba003c3a1d4681 292 Pfam PF00561 alpha/beta hydrolase fold 8 201 9.8E-16 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS23980 3edeee0d7c5ec90249bd79f1152692d0 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.197 T 28-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CO704_RS23980 3edeee0d7c5ec90249bd79f1152692d0 328 SUPERFAMILY SSF56112 6 327 1.05E-88 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS23980 3edeee0d7c5ec90249bd79f1152692d0 328 Pfam PF01636 Phosphotransferase enzyme family 32 253 1.2E-43 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CO704_RS23980 3edeee0d7c5ec90249bd79f1152692d0 328 Gene3D G3DSA:3.30.200.20 5 107 1.6E-18 T 28-03-2018 CO704_RS23980 3edeee0d7c5ec90249bd79f1152692d0 328 Gene3D G3DSA:3.90.1200.10 110 321 5.2E-20 T 28-03-2018 CO704_RS20740 23c0bc393ad4e1e6847121c7386b1c3a 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.979 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CO704_RS20740 23c0bc393ad4e1e6847121c7386b1c3a 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CO704_RS20740 23c0bc393ad4e1e6847121c7386b1c3a 176 SUPERFAMILY SSF50324 4 173 4.58E-67 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CO704_RS20740 23c0bc393ad4e1e6847121c7386b1c3a 176 Gene3D G3DSA:3.90.80.10 3 176 1.4E-53 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CO704_RS20740 23c0bc393ad4e1e6847121c7386b1c3a 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 6.2E-55 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CO704_RS12585 50831e17fdc2c57dd30955bbc5297783 272 Pfam PF11060 Protein of unknown function (DUF2861) 22 267 8.2E-40 T 28-03-2018 IPR021290 Protein of unknown function DUF2861 CO704_RS11445 0fa7d0053a4c467dade85b41b5986361 121 Pfam PF13811 Domain of unknown function (DUF4186) 5 112 1.4E-50 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 CO704_RS11445 0fa7d0053a4c467dade85b41b5986361 121 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 113 2.0E-43 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 CO704_RS00885 9c530ca5eadf229ca9322e7ec571e96a 414 Gene3D G3DSA:3.40.720.10 1 403 5.4E-44 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS00885 9c530ca5eadf229ca9322e7ec571e96a 414 PIRSF PIRSF001491 1 402 4.9E-104 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CO704_RS00885 9c530ca5eadf229ca9322e7ec571e96a 414 SUPERFAMILY SSF53649 2 100 9.68E-53 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS00885 9c530ca5eadf229ca9322e7ec571e96a 414 SUPERFAMILY SSF53649 230 401 9.68E-53 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS00885 9c530ca5eadf229ca9322e7ec571e96a 414 Pfam PF01676 Metalloenzyme superfamily 3 387 8.2E-42 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CO704_RS08340 d04a90b572371c8dfeb12316b583804d 305 SUPERFAMILY SSF103481 195 289 1.01E-13 T 28-03-2018 CO704_RS08340 d04a90b572371c8dfeb12316b583804d 305 Pfam PF00892 EamA-like transporter family 152 286 9.3E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS08340 d04a90b572371c8dfeb12316b583804d 305 Pfam PF00892 EamA-like transporter family 14 142 8.2E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS08340 d04a90b572371c8dfeb12316b583804d 305 SUPERFAMILY SSF103481 45 146 1.83E-10 T 28-03-2018 CO704_RS18315 ebe77754976e6340f123666bf60c1828 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.2E-77 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CO704_RS18315 ebe77754976e6340f123666bf60c1828 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.415 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CO704_RS18315 ebe77754976e6340f123666bf60c1828 149 Pfam PF03477 ATP cone domain 50 136 4.4E-16 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CO704_RS04195 b8ee5c935d631f08b7fe7842b5fff469 108 Gene3D G3DSA:3.30.450.20 13 105 3.2E-48 T 28-03-2018 CO704_RS04195 b8ee5c935d631f08b7fe7842b5fff469 108 SUPERFAMILY SSF143737 3 104 4.71E-50 T 28-03-2018 CO704_RS04195 b8ee5c935d631f08b7fe7842b5fff469 108 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 4 103 3.3E-47 T 28-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CO704_RS09210 456825926c211a7f4a8d755dd679a687 91 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.779 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CO704_RS09210 456825926c211a7f4a8d755dd679a687 91 Gene3D G3DSA:3.30.1070.10 1 83 5.4E-29 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CO704_RS09210 456825926c211a7f4a8d755dd679a687 91 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 1.3E-24 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CO704_RS09210 456825926c211a7f4a8d755dd679a687 91 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.9E-36 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CO704_RS09210 456825926c211a7f4a8d755dd679a687 91 SUPERFAMILY SSF55229 32 85 3.27E-18 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CO704_RS07295 c8977a9678c440cdbc58e2a4d7ccfb4d 311 Pfam PF03895 YadA-like membrane anchor domain 252 311 1.4E-13 T 28-03-2018 IPR005594 YadA-like, C-terminal CO704_RS07295 c8977a9678c440cdbc58e2a4d7ccfb4d 311 Gene3D G3DSA:3.30.1300.30 208 311 1.8E-28 T 28-03-2018 CO704_RS07295 c8977a9678c440cdbc58e2a4d7ccfb4d 311 Gene3D G3DSA:2.160.20.50 135 207 0.0011 T 28-03-2018 CO704_RS07295 c8977a9678c440cdbc58e2a4d7ccfb4d 311 SUPERFAMILY SSF54523 216 311 4.71E-23 T 28-03-2018 CO704_RS21245 c41a6b71cea431b9487e265a3c351331 206 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 5 197 1.9E-44 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CO704_RS21245 c41a6b71cea431b9487e265a3c351331 206 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 5 198 2.1E-52 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CO704_RS17710 140bf1ffa6b38737a8c31c745b615b7d 215 Pfam PF11726 Inovirus Gp2 20 213 8.7E-50 T 28-03-2018 CO704_RS08455 bcd17422bf312fc8a12c2b54c42a9313 78 SUPERFAMILY SSF64307 4 78 5.36E-24 T 28-03-2018 IPR001455 TusA-like domain CO704_RS08455 bcd17422bf312fc8a12c2b54c42a9313 78 Pfam PF01206 Sulfurtransferase TusA 10 78 3.2E-19 T 28-03-2018 IPR001455 TusA-like domain CO704_RS08455 bcd17422bf312fc8a12c2b54c42a9313 78 Gene3D G3DSA:3.30.110.40 6 78 7.8E-21 T 28-03-2018 IPR001455 TusA-like domain CO704_RS08455 bcd17422bf312fc8a12c2b54c42a9313 78 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 28-03-2018 IPR001455 TusA-like domain CO704_RS15555 23e44d0afc0dccdd40f9b77697f72669 60 SUPERFAMILY SSF158997 1 55 1.11E-19 T 28-03-2018 CO704_RS15555 23e44d0afc0dccdd40f9b77697f72669 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.895 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CO704_RS15555 23e44d0afc0dccdd40f9b77697f72669 60 Gene3D G3DSA:2.20.25.10 8 60 5.7E-18 T 28-03-2018 CO704_RS15555 23e44d0afc0dccdd40f9b77697f72669 60 Pfam PF03966 Trm112p-like protein 4 41 2.8E-9 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 8.1E-62 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.357 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 SUPERFAMILY SSF52304 6 147 4.97E-62 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 Pfam PF01220 Dehydroquinase class II 7 142 3.4E-62 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-56 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 Gene3D G3DSA:3.40.50.9100 2 149 1.7E-68 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS01405 07d9fc6e506d411e7a60799235b6dc79 150 PIRSF PIRSF001399 4 149 2.7E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CO704_RS15850 f227001497ee268c34b0417d3205d294 157 Pfam PF10767 Protein of unknown function (DUF2593) 16 155 2.9E-59 T 28-03-2018 IPR019703 Protein of unknown function DUF2593 CO704_RS24975 9ee6a655eeacb8cc5851b5390697cbb6 102 Pfam PF08980 Domain of unknown function (DUF1883) 7 76 4.3E-8 T 28-03-2018 IPR015073 Atu1913-like CO704_RS24975 9ee6a655eeacb8cc5851b5390697cbb6 102 SUPERFAMILY SSF141099 4 86 9.94E-13 T 28-03-2018 IPR015073 Atu1913-like CO704_RS24975 9ee6a655eeacb8cc5851b5390697cbb6 102 Gene3D G3DSA:4.10.1210.10 4 91 4.1E-12 T 28-03-2018 IPR015073 Atu1913-like CO704_RS02385 80d6dbbb4e2e771364eda7af195dd182 235 SMART SM00052 2 228 3.6E-4 T 28-03-2018 IPR001633 EAL domain CO704_RS02385 80d6dbbb4e2e771364eda7af195dd182 235 Gene3D G3DSA:3.20.20.450 14 228 6.5E-20 T 28-03-2018 IPR001633 EAL domain CO704_RS02385 80d6dbbb4e2e771364eda7af195dd182 235 Pfam PF00563 EAL domain 20 222 1.0E-19 T 28-03-2018 IPR001633 EAL domain CO704_RS02385 80d6dbbb4e2e771364eda7af195dd182 235 SUPERFAMILY SSF141868 21 222 4.32E-20 T 28-03-2018 IPR001633 EAL domain CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 SUPERFAMILY SSF51261 28 229 1.52E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 Gene3D G3DSA:2.70.70.10 68 232 2.5E-38 T 28-03-2018 CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 SMART SM00257 28 72 7.7E-16 T 28-03-2018 IPR018392 LysM domain CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 Pfam PF01551 Peptidase family M23 132 225 2.3E-30 T 28-03-2018 IPR016047 Peptidase M23 CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 Gene3D G3DSA:3.10.350.10 22 67 1.5E-13 T 28-03-2018 CO704_RS03120 3f8a5fe26340bf7f8ea5fac0c9950974 233 Pfam PF01476 LysM domain 29 71 4.2E-14 T 28-03-2018 IPR018392 LysM domain CO704_RS00965 2d61e69aa6ae1ece959c29c9d14559ba 694 Pfam PF12805 FUSC-like inner membrane protein yccS 63 331 3.2E-70 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CO704_RS00965 2d61e69aa6ae1ece959c29c9d14559ba 694 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 673 4.2E-219 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CO704_RS00965 2d61e69aa6ae1ece959c29c9d14559ba 694 Pfam PF13515 Fusaric acid resistance protein-like 378 499 2.1E-19 T 28-03-2018 CO704_RS01410 a7aa6539f862930c4405f8f977d7cb8d 199 Pfam PF01794 Ferric reductase like transmembrane component 47 161 6.8E-15 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CO704_RS01410 a7aa6539f862930c4405f8f977d7cb8d 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 199 21.52 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CO704_RS22885 3860d390a5193e5cd2254663026b7f14 633 Pfam PF01964 Radical SAM ThiC family 150 598 5.7E-199 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CO704_RS22885 3860d390a5193e5cd2254663026b7f14 633 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 149 603 56.393 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CO704_RS22885 3860d390a5193e5cd2254663026b7f14 633 Pfam PF13667 ThiC-associated domain 29 110 6.2E-31 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CO704_RS22885 3860d390a5193e5cd2254663026b7f14 633 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 149 601 1.1E-223 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CO704_RS01175 6dd27abd11aaa0f79a6c2cf2e6dd993f 117 SUPERFAMILY SSF53137 3 115 1.18E-52 T 28-03-2018 CO704_RS01175 6dd27abd11aaa0f79a6c2cf2e6dd993f 117 Gene3D G3DSA:3.30.420.100 1 117 5.8E-38 T 28-03-2018 CO704_RS01175 6dd27abd11aaa0f79a6c2cf2e6dd993f 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 2.3E-43 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS01175 6dd27abd11aaa0f79a6c2cf2e6dd993f 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 6.4E-46 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS01175 6dd27abd11aaa0f79a6c2cf2e6dd993f 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.709 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CO704_RS14750 ee09bdff05c0fab5d50e9feca4c292b5 190 Gene3D G3DSA:2.40.128.110 23 190 8.6E-50 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS14750 ee09bdff05c0fab5d50e9feca4c292b5 190 SMART SM00867 24 188 1.6E-70 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS14750 ee09bdff05c0fab5d50e9feca4c292b5 190 Pfam PF04264 YceI-like domain 25 186 1.4E-41 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS14750 ee09bdff05c0fab5d50e9feca4c292b5 190 Hamap MF_00780 Protein YceI [yceI]. 1 190 44.87 T 28-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI CO704_RS14750 ee09bdff05c0fab5d50e9feca4c292b5 190 SUPERFAMILY SSF101874 22 190 3.14E-55 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CO704_RS07605 2ed932f45c37eb7e2a3074809f34c114 367 Gene3D G3DSA:3.40.50.620 47 340 7.6E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS07605 2ed932f45c37eb7e2a3074809f34c114 367 SUPERFAMILY SSF52402 53 310 2.65E-25 T 28-03-2018 CO704_RS07605 2ed932f45c37eb7e2a3074809f34c114 367 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 1 332 4.4E-80 T 28-03-2018 IPR020022 N-acetyl sugar amidotransferase CO704_RS01075 a7afc20280164d18647b59f93ef11be3 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 4.2E-16 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CO704_RS05875 1eee9bbde1fce38419d6c8b9ddac4d20 119 Gene3D G3DSA:1.20.58.70 28 113 5.3E-5 T 28-03-2018 CO704_RS05875 1eee9bbde1fce38419d6c8b9ddac4d20 119 Pfam PF14282 FlxA-like protein 20 112 2.3E-18 T 28-03-2018 IPR025577 FlxA-like protein CO704_RS21020 377866987c6d55f1444d9be644c20855 181 SMART SM00479 7 180 1.5E-21 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS21020 377866987c6d55f1444d9be644c20855 181 Gene3D G3DSA:3.30.420.10 2 181 1.1E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS21020 377866987c6d55f1444d9be644c20855 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.617 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 CO704_RS21020 377866987c6d55f1444d9be644c20855 181 SUPERFAMILY SSF53098 4 180 5.36E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS21020 377866987c6d55f1444d9be644c20855 181 Pfam PF00929 Exonuclease 9 170 1.4E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 48.627 T 28-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 PRINTS PR00762 Chloride channel signature 405 424 1.7E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 PRINTS PR00762 Chloride channel signature 102 119 1.7E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 PRINTS PR00762 Chloride channel signature 387 403 1.7E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 PRINTS PR00762 Chloride channel signature 352 372 1.7E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 PRINTS PR00762 Chloride channel signature 183 202 1.7E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 Gene3D G3DSA:1.10.3080.10 20 461 2.1E-103 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 Pfam PF00654 Voltage gated chloride channel 89 437 4.0E-90 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS19365 382e902e4fa1d78ca73483df1d927675 473 SUPERFAMILY SSF81340 23 452 1.28E-108 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS08675 746060003a9a8057eef63c10ec9bba7f 83 ProDom PD060536 YECJ YPO1738 1 79 2.0E-31 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ CO704_RS08675 746060003a9a8057eef63c10ec9bba7f 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 79 1.2E-45 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ CO704_RS17930 fe1f996b46ef8577737ce19418c3bc5d 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 4 184 7.3E-55 T 28-03-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 CO704_RS17930 fe1f996b46ef8577737ce19418c3bc5d 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 2.0E-62 T 28-03-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 CO704_RS09090 82b370a4fcf7f4b19f8c7e6790bfd7fc 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 37 2.6E-26 T 28-03-2018 IPR019672 Protein of unknown function DUF2627 CO704_RS19655 6117d5768a11296f178565016b45642c 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19655 6117d5768a11296f178565016b45642c 360 Pfam PF00953 Glycosyl transferase family 4 99 284 3.4E-35 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CO704_RS19655 6117d5768a11296f178565016b45642c 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 4.5E-160 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19655 6117d5768a11296f178565016b45642c 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19655 6117d5768a11296f178565016b45642c 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 4.5E-5 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS19655 6117d5768a11296f178565016b45642c 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.861 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CO704_RS14000 a5be875a7ef6b2875bf2c0006bb6e605 75 Pfam PF07383 Protein of unknown function (DUF1496) 17 74 8.2E-25 T 28-03-2018 IPR009971 Protein of unknown function DUF1496 CO704_RS20640 80846555ce17bf4bfc3043ca09fa42ff 332 SUPERFAMILY SSF55347 126 291 1.26E-24 T 28-03-2018 CO704_RS20640 80846555ce17bf4bfc3043ca09fa42ff 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 8.8E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CO704_RS20640 80846555ce17bf4bfc3043ca09fa42ff 332 Gene3D G3DSA:3.40.50.720 1 142 2.5E-33 T 28-03-2018 CO704_RS20640 80846555ce17bf4bfc3043ca09fa42ff 332 SUPERFAMILY SSF51735 2 152 1.31E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS20640 80846555ce17bf4bfc3043ca09fa42ff 332 Gene3D G3DSA:3.30.360.10 143 325 9.8E-30 T 28-03-2018 CO704_RS16625 5a14b35656e5497a7b558b03cf05fcc1 141 TIGRFAM TIGR02801 tolR: protein TolR 12 139 2.5E-39 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CO704_RS16625 5a14b35656e5497a7b558b03cf05fcc1 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 140 3.1E-25 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CO704_RS02825 9d292c02a8fb5cf5bb6ae45bf3bec25b 235 SUPERFAMILY SSF54060 25 229 1.17E-85 T 28-03-2018 CO704_RS02825 9d292c02a8fb5cf5bb6ae45bf3bec25b 235 Pfam PF04231 Endonuclease I 60 228 2.6E-44 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 CO704_RS08350 dcf53c90ce60372607264ef7cf104566 59 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 48 1.8E-7 T 28-03-2018 IPR019226 Protein of unknown function DUF2158 CO704_RS15275 b96ebcce460fc426b4b81c31e74168f3 83 Gene3D G3DSA:2.10.260.10 1 83 5.6E-15 T 28-03-2018 CO704_RS15275 b96ebcce460fc426b4b81c31e74168f3 83 SUPERFAMILY SSF89447 4 75 9.94E-12 T 28-03-2018 CO704_RS14685 76fb11532499dcac63dcdd5ddad04175 160 Gene3D G3DSA:2.40.50.140 1 70 1.5E-13 T 28-03-2018 CO704_RS14685 76fb11532499dcac63dcdd5ddad04175 160 Pfam PF00313 'Cold-shock' DNA-binding domain 2 61 3.0E-7 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CO704_RS14685 76fb11532499dcac63dcdd5ddad04175 160 SUPERFAMILY SSF50249 1 62 9.55E-10 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CO704_RS24330 afeee36b92bcd9e7229d2949614fb32f 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 383 3.2E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS24330 afeee36b92bcd9e7229d2949614fb32f 393 Gene3D G3DSA:1.10.3470.10 49 389 3.7E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 SUPERFAMILY SSF54292 3 79 6.95E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 59 2.2E-4 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 Gene3D G3DSA:1.10.150.120 76 152 6.7E-30 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 Gene3D G3DSA:3.10.20.30 1 75 2.2E-22 T 28-03-2018 IPR012675 Beta-grasp domain CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 SUPERFAMILY SSF47741 85 151 1.1E-28 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CO704_RS10950 1793ba4e0012e64d438185aa3ff839d5 152 Pfam PF01799 [2Fe-2S] binding domain 74 146 2.6E-27 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CO704_RS12135 29c5cc254a509543d7776cdd4bf9af62 264 Gene3D G3DSA:1.10.3620.10 149 253 1.1E-39 T 28-03-2018 CO704_RS12135 29c5cc254a509543d7776cdd4bf9af62 264 Pfam PF02698 DUF218 domain 38 172 5.5E-14 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CO704_RS22155 c29ce94aa45c5a7b868656890023b873 411 Pfam PF13730 Helix-turn-helix domain 55 115 3.5E-11 T 28-03-2018 CO704_RS22905 b73d76e4fb5bfae4f0e5e055e5c1e5e5 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 9.5E-110 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CO704_RS22905 b73d76e4fb5bfae4f0e5e055e5c1e5e5 259 Gene3D G3DSA:3.20.20.70 1 259 2.4E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS22905 b73d76e4fb5bfae4f0e5e055e5c1e5e5 259 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.577 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CO704_RS22905 b73d76e4fb5bfae4f0e5e055e5c1e5e5 259 SUPERFAMILY SSF110399 1 236 1.7E-83 T 28-03-2018 CO704_RS23910 70d31e9f022df659d7d09241a132ff8b 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.1E-52 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CO704_RS23910 70d31e9f022df659d7d09241a132ff8b 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 6.3E-72 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CO704_RS23910 70d31e9f022df659d7d09241a132ff8b 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.428 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CO704_RS23910 70d31e9f022df659d7d09241a132ff8b 145 SUPERFAMILY SSF69500 1 144 2.35E-56 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CO704_RS23910 70d31e9f022df659d7d09241a132ff8b 145 Gene3D G3DSA:3.50.80.10 1 145 4.7E-54 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CO704_RS16400 2477d8fe322e2c3dbc62be9b621c34a7 368 Pfam PF12698 ABC-2 family transporter protein 25 360 1.2E-51 T 28-03-2018 CO704_RS16400 2477d8fe322e2c3dbc62be9b621c34a7 368 Gene3D G3DSA:3.40.1710.10 38 188 1.8E-27 T 28-03-2018 CO704_RS16400 2477d8fe322e2c3dbc62be9b621c34a7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS16400 2477d8fe322e2c3dbc62be9b621c34a7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS16400 2477d8fe322e2c3dbc62be9b621c34a7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS17335 7d0ed638e2cb582cfaca76221b157b37 458 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.5E-192 T 28-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CO704_RS17335 7d0ed638e2cb582cfaca76221b157b37 458 Pfam PF03606 C4-dicarboxylate anaerobic carrier 5 451 4.6E-136 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CO704_RS17845 0f89907e67e2250d6e1587f65024517d 194 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 185 4.5E-65 T 28-03-2018 IPR018715 Protein of unknown function DUF2239 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 SUPERFAMILY SSF46785 6 84 1.27E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 Gene3D G3DSA:1.10.10.10 1 84 7.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 Gene3D G3DSA:3.40.190.10 90 180 7.3E-12 T 28-03-2018 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 Gene3D G3DSA:3.40.190.10 181 258 3.3E-7 T 28-03-2018 CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 Pfam PF03466 LysR substrate binding domain 93 286 5.4E-22 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS12005 3d1e63f85da3fa5475b85408db6cd435 287 SUPERFAMILY SSF53850 91 286 2.71E-26 T 28-03-2018 CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.472 T 28-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 Gene3D G3DSA:3.90.1150.10 243 376 5.5E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 SUPERFAMILY SSF53383 2 375 2.48E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 4.8E-88 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 Gene3D G3DSA:3.40.640.10 1 242 9.0E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 PIRSF PIRSF000390 1 376 5.1E-122 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS23325 2ba9408068588ed907a237885f8b1786 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 2.8E-218 T 28-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CO704_RS02065 aaa85e66e536b78a3b0213805f21c95d 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 7.6E-133 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CO704_RS02065 aaa85e66e536b78a3b0213805f21c95d 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 355 3.3E-73 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 425 7.4E-71 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 Gene3D G3DSA:1.20.1250.20 264 461 6.9E-25 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 406 425 5.1E-6 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 5.1E-6 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 5.1E-6 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 5.1E-6 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 SUPERFAMILY SSF103473 254 464 6.8E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 SUPERFAMILY SSF103473 11 202 6.8E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 Gene3D G3DSA:1.20.1250.20 13 202 5.6E-26 T 28-03-2018 CO704_RS10865 eefd1effba5cd6016004d91c970f3b74 467 Pfam PF07690 Major Facilitator Superfamily 27 416 1.0E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS08505 c7860a78f6df54a9483b1330f7ca8b6e 375 Gene3D G3DSA:3.40.640.10 12 234 1.9E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS08505 c7860a78f6df54a9483b1330f7ca8b6e 375 PIRSF PIRSF000390 1 371 3.1E-106 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS08505 c7860a78f6df54a9483b1330f7ca8b6e 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 365 8.3E-101 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CO704_RS08505 c7860a78f6df54a9483b1330f7ca8b6e 375 Gene3D G3DSA:3.90.1150.10 235 374 8.9E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS08505 c7860a78f6df54a9483b1330f7ca8b6e 375 SUPERFAMILY SSF53383 3 369 1.53E-103 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 2.5E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 SMART SM01134 75 236 1.8E-56 T 28-03-2018 CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 SUPERFAMILY SSF100950 76 235 3.98E-28 T 28-03-2018 CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 SMART SM00420 8 57 2.5E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 Pfam PF00455 DeoR C terminal sensor domain 77 234 8.4E-42 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 Gene3D G3DSA:3.40.50.1360 80 239 5.7E-29 T 28-03-2018 CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 Gene3D G3DSA:1.10.10.10 1 79 2.9E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS07185 5beb23a5799144dc82ddd07579dd34c0 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CO704_RS01950 02261f65c67f95afcc53e23cbf576d41 128 SUPERFAMILY SSF55298 4 127 2.98E-43 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS01950 02261f65c67f95afcc53e23cbf576d41 128 Gene3D G3DSA:3.30.1330.40 1 128 2.0E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CO704_RS01950 02261f65c67f95afcc53e23cbf576d41 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 28-03-2018 IPR019897 RidA, conserved site CO704_RS01950 02261f65c67f95afcc53e23cbf576d41 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 126 1.8E-52 T 28-03-2018 IPR006056 RidA family CO704_RS01950 02261f65c67f95afcc53e23cbf576d41 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 4.0E-45 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CO704_RS18195 3297e47efd6e938c6d0365efa4aa2dfb 192 Pfam PF03923 Uncharacterized lipoprotein 29 187 1.4E-52 T 28-03-2018 IPR005619 Uncharacterised protein family, YajG CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 Pfam PF03958 Bacterial type II/III secretion system short domain 170 298 1.9E-18 T 28-03-2018 IPR005644 NolW-like CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 491 510 1.6E-25 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 402 417 1.6E-25 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 301 321 1.6E-25 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 368 387 1.6E-25 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 181 198 1.6E-25 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 Pfam PF00263 Bacterial type II and III secretion system protein 355 512 9.2E-36 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 CO704_RS16145 d55685bb553d82dbd1a518298f0460d3 689 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 238 513 1.1E-80 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 CO704_RS23195 abcc520fc43ba8325171d941f958f9cd 300 Pfam PF00892 EamA-like transporter family 9 142 2.7E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS23195 abcc520fc43ba8325171d941f958f9cd 300 SUPERFAMILY SSF103481 187 284 7.72E-6 T 28-03-2018 CO704_RS23195 abcc520fc43ba8325171d941f958f9cd 300 SUPERFAMILY SSF103481 43 145 6.67E-14 T 28-03-2018 CO704_RS23195 abcc520fc43ba8325171d941f958f9cd 300 TIGRFAM TIGR00688 rarD: protein RarD 8 261 4.3E-108 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 SUPERFAMILY SSF53850 31 266 5.3E-50 T 28-03-2018 CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 34 314 3.2E-84 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 SMART SM00062 33 251 2.2E-29 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 Gene3D G3DSA:3.40.190.10 29 133 7.8E-19 T 28-03-2018 CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 Gene3D G3DSA:3.40.190.10 134 320 3.6E-34 T 28-03-2018 CO704_RS15460 fb22991f6e0509fd01a7161b642d23e4 325 Pfam PF09084 NMT1/THI5 like 69 187 7.4E-12 T 28-03-2018 IPR015168 SsuA/THI5-like CO704_RS22325 70056cdbf73668d67a32401c280d24f0 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 137 2.9E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CO704_RS22325 70056cdbf73668d67a32401c280d24f0 142 SUPERFAMILY SSF54593 3 140 5.49E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS22325 70056cdbf73668d67a32401c280d24f0 142 Gene3D G3DSA:3.10.180.10 7 142 4.6E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS17790 90dd888d1a358a7536aa15ea68c326d5 845 Pfam PF13954 PapC N-terminal domain 40 185 8.3E-33 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CO704_RS17790 90dd888d1a358a7536aa15ea68c326d5 845 SUPERFAMILY SSF141729 57 177 1.2E-26 T 28-03-2018 CO704_RS17790 90dd888d1a358a7536aa15ea68c326d5 845 Pfam PF00577 Outer membrane usher protein 203 755 2.2E-166 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CO704_RS17790 90dd888d1a358a7536aa15ea68c326d5 845 Pfam PF13953 PapC C-terminal domain 764 830 3.6E-22 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CO704_RS11780 82bc8cd1ee37492a34312f6f48ac48ae 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 130 2.2E-35 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CO704_RS11780 82bc8cd1ee37492a34312f6f48ac48ae 141 SUPERFAMILY SSF54637 1 128 5.13E-32 T 28-03-2018 IPR029069 HotDog domain CO704_RS11780 82bc8cd1ee37492a34312f6f48ac48ae 141 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 20 132 4.5E-49 T 28-03-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 CO704_RS11780 82bc8cd1ee37492a34312f6f48ac48ae 141 Gene3D G3DSA:3.10.129.10 1 132 5.1E-29 T 28-03-2018 CO704_RS11780 82bc8cd1ee37492a34312f6f48ac48ae 141 Pfam PF03061 Thioesterase superfamily 49 122 5.5E-19 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS00770 eebb5281064f1de4b7147c2a58309d0c 582 Pfam PF13687 Domain of unknown function (DUF4153) 156 393 9.2E-28 T 28-03-2018 IPR025291 Protein of unknown function DUF4153 CO704_RS21110 0516f41353a6787e9826a8ac11606629 260 Pfam PF03609 PTS system sorbose-specific iic component 5 235 5.9E-70 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 Gene3D G3DSA:3.20.20.450 474 727 6.3E-69 T 28-03-2018 IPR001633 EAL domain CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 Pfam PF05231 MASE1 25 308 1.4E-20 T 28-03-2018 IPR007895 MASE1 CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 460 3.5E-6 T 28-03-2018 IPR000160 GGDEF domain CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 Gene3D G3DSA:3.30.70.270 311 468 2.2E-10 T 28-03-2018 CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 Pfam PF00563 EAL domain 488 719 2.2E-57 T 28-03-2018 IPR001633 EAL domain CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 SMART SM00052 482 724 2.4E-78 T 28-03-2018 IPR001633 EAL domain CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 SUPERFAMILY SSF55073 327 460 3.37E-7 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 SUPERFAMILY SSF141868 488 725 3.14E-66 T 28-03-2018 IPR001633 EAL domain CO704_RS05935 7b7535200dc160b0c23f78761228a80b 727 SMART SM00267 311 468 3.7E-9 T 28-03-2018 IPR000160 GGDEF domain CO704_RS08540 918b984c78e042e3587508eb66527276 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 1.8E-30 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS08540 918b984c78e042e3587508eb66527276 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 4.4E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08540 918b984c78e042e3587508eb66527276 222 SUPERFAMILY SSF161098 13 200 6.8E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS08540 918b984c78e042e3587508eb66527276 222 Gene3D G3DSA:1.10.3720.10 9 217 1.2E-44 T 28-03-2018 CO704_RS06760 5e219c7b1cbe399e9c6f568be6429990 213 Gene3D G3DSA:2.60.120.590 11 213 7.2E-47 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CO704_RS06760 5e219c7b1cbe399e9c6f568be6429990 213 SUPERFAMILY SSF51197 15 211 3.98E-58 T 28-03-2018 CO704_RS06760 5e219c7b1cbe399e9c6f568be6429990 213 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 210 4.4E-52 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CO704_RS22250 3fbc84191f316826eafadc26bc7d3b57 285 Pfam PF00950 ABC 3 transport family 10 264 8.8E-83 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CO704_RS22250 3fbc84191f316826eafadc26bc7d3b57 285 SUPERFAMILY SSF81345 4 260 6.8E-38 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS22250 3fbc84191f316826eafadc26bc7d3b57 285 Gene3D G3DSA:1.10.3470.10 3 272 3.0E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 Pfam PF01311 Bacterial export proteins, family 1 13 245 4.6E-58 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 250 1.5E-52 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.9E-19 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.9E-19 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.9E-19 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS17570 f4df698a0550dce46d420ba06abcfc6e 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.9E-19 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CO704_RS18680 25c2550078841a66b082a037598aaf27 227 Gene3D G3DSA:2.40.160.20 10 227 1.4E-22 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS18680 25c2550078841a66b082a037598aaf27 227 Pfam PF13505 Outer membrane protein beta-barrel domain 10 200 1.2E-17 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CO704_RS18680 25c2550078841a66b082a037598aaf27 227 SUPERFAMILY SSF56925 25 227 5.49E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 96.863 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 SUPERFAMILY SSF52540 1 343 1.07E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 4.3E-41 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 Gene3D G3DSA:3.40.50.300 1 357 5.7E-33 T 28-03-2018 CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 9.8E-136 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CO704_RS24705 66c81c0eb226c8f2b92bd58876df511b 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CO704_RS09465 2b7beed83d56b91a38836b4c43ff736b 292 Pfam PF16374 Cycle inhibiting factor (CIF) 114 224 3.7E-24 T 28-03-2018 IPR032278 Cycle inhibiting factor (CIF) CO704_RS11595 d53e4784fbb295d7a9ec64b2ac45d37c 176 Gene3D G3DSA:3.40.630.30 1 176 1.7E-31 T 28-03-2018 CO704_RS11595 d53e4784fbb295d7a9ec64b2ac45d37c 176 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 1.9E-36 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS11595 d53e4784fbb295d7a9ec64b2ac45d37c 176 SUPERFAMILY SSF55729 2 171 7.34E-45 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS24565 6057c89dbcf6d6e3c9bd3b787428fda7 61 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 60 4.0E-19 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CO704_RS24565 6057c89dbcf6d6e3c9bd3b787428fda7 61 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 58 2.5E-22 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 2 86 1.1E-29 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 PIRSF PIRSF004669 2 90 2.1E-30 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 Pfam PF01313 Bacterial export proteins, family 3 9 78 1.1E-27 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 2.8E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 2.8E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS17565 ccf710fca0e015c580e6a053a3bfed9f 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 2.8E-17 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CO704_RS14205 532efe2971e8c9bdcb2046f9242cb9ff 116 Pfam PF06993 Protein of unknown function (DUF1304) 7 112 4.7E-42 T 28-03-2018 IPR009732 Protein of unknown function DUF1304 CO704_RS20350 1c0cd1cc622fa1cad0c5836c8b51d1ef 176 Pfam PF03857 Colicin immunity protein 42 174 2.2E-32 T 28-03-2018 IPR005557 Colicin immunity protein GO:0015643|GO:0030153 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 Pfam PF01266 FAD dependent oxidoreductase 4 350 3.7E-43 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 SUPERFAMILY SSF54373 215 313 5.49E-18 T 28-03-2018 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 SUPERFAMILY SSF51905 313 370 1.17E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 SUPERFAMILY SSF51905 2 216 1.17E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 Gene3D G3DSA:3.50.50.60 1 373 3.3E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS14735 dc0e4e895dc2239a75e6db044e0df6bb 373 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 73.996 T 28-03-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 CO704_RS21170 d63ab6bcb5891277ffdc29b763d88c92 191 SMART SM00749 51 114 3.1E-8 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CO704_RS21170 d63ab6bcb5891277ffdc29b763d88c92 191 SMART SM00749 129 191 1.7E-4 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CO704_RS21170 d63ab6bcb5891277ffdc29b763d88c92 191 Pfam PF04972 BON domain 124 189 3.5E-17 T 28-03-2018 IPR007055 BON domain CO704_RS21170 d63ab6bcb5891277ffdc29b763d88c92 191 Pfam PF04972 BON domain 46 113 5.5E-15 T 28-03-2018 IPR007055 BON domain CO704_RS02440 2996c7403d1751bf9d500397e31f3922 494 Gene3D G3DSA:1.20.1600.10 12 435 6.4E-77 T 28-03-2018 CO704_RS02440 2996c7403d1751bf9d500397e31f3922 494 SUPERFAMILY SSF56954 25 442 1.1E-95 T 28-03-2018 CO704_RS02440 2996c7403d1751bf9d500397e31f3922 494 Pfam PF02321 Outer membrane efflux protein 232 425 6.6E-33 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS02440 2996c7403d1751bf9d500397e31f3922 494 Pfam PF02321 Outer membrane efflux protein 25 209 9.7E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CO704_RS02440 2996c7403d1751bf9d500397e31f3922 494 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 8.3E-137 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CO704_RS00300 474273e22a21ea137c9e51e0453e27df 176 Gene3D G3DSA:3.10.450.50 30 174 8.8E-7 T 28-03-2018 CO704_RS00300 474273e22a21ea137c9e51e0453e27df 176 SUPERFAMILY SSF54427 34 160 1.75E-6 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS01640 6480f8b8ee05c8575e47ca06155e5b9b 183 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 27 166 2.4E-52 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CO704_RS01640 6480f8b8ee05c8575e47ca06155e5b9b 183 Gene3D G3DSA:2.60.450.10 27 164 1.7E-29 T 28-03-2018 CO704_RS01640 6480f8b8ee05c8575e47ca06155e5b9b 183 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 26.367 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CO704_RS01640 6480f8b8ee05c8575e47ca06155e5b9b 183 Pfam PF03968 OstA-like protein 37 149 2.7E-32 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CO704_RS19255 25c5f25310d731b0a2552ea9068b9e69 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.784 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS19255 25c5f25310d731b0a2552ea9068b9e69 151 Gene3D G3DSA:3.10.129.10 1 149 1.4E-55 T 28-03-2018 CO704_RS19255 25c5f25310d731b0a2552ea9068b9e69 151 SUPERFAMILY SSF54637 7 146 2.93E-51 T 28-03-2018 IPR029069 HotDog domain CO704_RS19255 25c5f25310d731b0a2552ea9068b9e69 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.9E-60 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS19255 25c5f25310d731b0a2552ea9068b9e69 151 Pfam PF07977 FabA-like domain 17 141 9.7E-41 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CO704_RS05110 296657dd97a9c18c358c8ecc6a5f4bdb 222 Gene3D G3DSA:1.10.3720.10 3 216 2.4E-29 T 28-03-2018 CO704_RS05110 296657dd97a9c18c358c8ecc6a5f4bdb 222 SUPERFAMILY SSF161098 22 201 7.85E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS05110 296657dd97a9c18c358c8ecc6a5f4bdb 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 202 8.3E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 SUPERFAMILY SSF52540 4 227 9.78E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 2.5E-39 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 Pfam PF00005 ABC transporter 24 172 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 Gene3D G3DSA:3.40.50.300 1 257 1.5E-65 T 28-03-2018 CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 SMART SM00382 33 220 2.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS15725 c8f85f24e9a9f8e876283f9166506ecb 648 Pfam PF02687 FtsX-like permease family 553 641 1.2E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CO704_RS09515 4b702dac31518b6919be75f0dd78ff4d 148 Pfam PF13699 Domain of unknown function (DUF4157) 49 114 4.5E-12 T 28-03-2018 IPR025295 Domain of unknown function DUF4157 CO704_RS20220 3f81eecce982d2565ec83c7de2db4e89 258 Pfam PF06738 Putative threonine/serine exporter 13 252 1.1E-68 T 28-03-2018 IPR010619 Putative threonine/serine exporter CO704_RS19410 af38882e4cccc55f7d0512753973bbaa 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 4.5E-72 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CO704_RS19410 af38882e4cccc55f7d0512753973bbaa 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 232 3.6E-83 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CO704_RS19410 af38882e4cccc55f7d0512753973bbaa 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 53.956 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CO704_RS07675 1e7df427aaebe1ba9e513e8f26075389 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.9E-78 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CO704_RS07675 1e7df427aaebe1ba9e513e8f26075389 245 Gene3D G3DSA:3.20.20.70 1 245 2.0E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS07675 1e7df427aaebe1ba9e513e8f26075389 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.757 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CO704_RS07675 1e7df427aaebe1ba9e513e8f26075389 245 SUPERFAMILY SSF51366 1 242 3.63E-67 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CO704_RS07675 1e7df427aaebe1ba9e513e8f26075389 245 Pfam PF00977 Histidine biosynthesis protein 1 233 1.2E-76 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CO704_RS11140 df153591e7cc6ce87a10168fe311080b 148 Pfam PF11694 Protein of unknown function (DUF3290) 2 145 1.3E-52 T 28-03-2018 IPR021707 Protein of unknown function DUF3290 CO704_RS22725 22aab49e751ad8a1d7584477363b6187 212 Gene3D G3DSA:2.40.360.10 17 212 3.9E-59 T 28-03-2018 IPR023373 YmcC-like domain CO704_RS22725 22aab49e751ad8a1d7584477363b6187 212 SUPERFAMILY SSF159270 22 208 1.29E-54 T 28-03-2018 IPR023373 YmcC-like domain CO704_RS22725 22aab49e751ad8a1d7584477363b6187 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 204 7.0E-59 T 28-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB CO704_RS17380 6a3bbb023ae414b766c33859f6d31b89 341 Pfam PF02120 Flagellar hook-length control protein FliK 222 303 8.6E-21 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CO704_RS17380 6a3bbb023ae414b766c33859f6d31b89 341 Gene3D G3DSA:2.60.40.10 101 204 0.0015 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS11765 6ff32c52b550e4d1fb75e94ee294d643 926 Gene3D G3DSA:3.40.390.10 694 908 1.8E-7 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CO704_RS11765 6ff32c52b550e4d1fb75e94ee294d643 926 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 606 686 2.1E-26 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS14115 5e84e1910edc01281e6deeca29c65e23 167 Gene3D G3DSA:3.90.960.10 4 167 4.6E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS14115 5e84e1910edc01281e6deeca29c65e23 167 Pfam PF04073 Aminoacyl-tRNA editing domain 33 154 1.3E-23 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS14115 5e84e1910edc01281e6deeca29c65e23 167 SUPERFAMILY SSF55826 11 163 5.1E-33 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CO704_RS20695 ee99a85504316724eaf3f62ff3fc93ae 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 6.0E-22 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CO704_RS11960 76506bf540e4664a6f1ca2d189db7056 300 SUPERFAMILY SSF53474 66 300 7.51E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11960 76506bf540e4664a6f1ca2d189db7056 300 Gene3D G3DSA:3.40.50.1820 46 300 9.3E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11960 76506bf540e4664a6f1ca2d189db7056 300 Pfam PF00326 Prolyl oligopeptidase family 224 299 1.7E-6 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CO704_RS21050 f61bfa0abfe0b3324a519a1ca3f68643 888 Gene3D G3DSA:3.40.50.2000 231 445 3.3E-16 T 28-03-2018 CO704_RS21050 f61bfa0abfe0b3324a519a1ca3f68643 888 Pfam PF00535 Glycosyl transferase family 2 471 636 6.0E-21 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS21050 f61bfa0abfe0b3324a519a1ca3f68643 888 Gene3D G3DSA:3.90.550.10 468 709 2.6E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS21050 f61bfa0abfe0b3324a519a1ca3f68643 888 SUPERFAMILY SSF53448 462 701 8.91E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS21050 f61bfa0abfe0b3324a519a1ca3f68643 888 SUPERFAMILY SSF53756 124 439 1.18E-17 T 28-03-2018 CO704_RS24550 2c8352c243a7615f96880ff9eda0f885 560 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 555 4.0E-234 T 28-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CO704_RS24550 2c8352c243a7615f96880ff9eda0f885 560 Gene3D G3DSA:3.40.720.10 75 488 1.2E-4 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS24550 2c8352c243a7615f96880ff9eda0f885 560 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 22 558 5.0E-232 T 28-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 428 40.702 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 Gene3D G3DSA:3.40.50.1980 227 372 6.0E-70 T 28-03-2018 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 427 3.0E-159 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PIRSF PIRSF000099 1 431 1.0E-166 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 138 164 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 1.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 SUPERFAMILY SSF53720 7 428 1.12E-87 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 Pfam PF00815 Histidinol dehydrogenase 29 428 8.8E-165 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CO704_RS07695 2fd9ecc75f510440e792edc475b93b88 435 Gene3D G3DSA:3.40.50.1980 30 226 5.5E-86 T 28-03-2018 CO704_RS15340 70378dab3fe9aecc467c2b0d8057ede6 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 208 8.3E-33 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 CO704_RS02180 352a959504f536be739cb924651510ff 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 65 159 2.0E-37 T 28-03-2018 IPR004914 Antirestriction protein CO704_RS02180 352a959504f536be739cb924651510ff 159 Pfam PF03230 Antirestriction protein 67 159 4.6E-35 T 28-03-2018 IPR004914 Antirestriction protein CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 SUPERFAMILY SSF75217 2 154 5.23E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.5E-46 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.4E-83 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 PIRSF PIRSF004505 1 155 1.0E-40 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.793 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CO704_RS17235 dd56b8266449f48d18d897dbf5048816 156 Gene3D G3DSA:3.40.1280.10 1 155 1.9E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 199 1.1E-30 T 28-03-2018 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 8.1E-5 T 28-03-2018 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 8.1E-5 T 28-03-2018 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 Gene3D G3DSA:3.50.50.60 170 419 3.0E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 Gene3D G3DSA:3.50.50.60 6 161 6.6E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 SUPERFAMILY SSF51905 5 205 9.59E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 2.2E-9 T 28-03-2018 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.2E-9 T 28-03-2018 CO704_RS08240 eb1c59ae905eac15dc1d68dd1e777b98 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 2.2E-9 T 28-03-2018 CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 SUPERFAMILY SSF144020 24 306 1.57E-98 T 28-03-2018 IPR024064 FdhE-like CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.095 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 6.7E-116 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 PIRSF PIRSF018296 1 309 1.7E-136 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 1.5E-144 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CO704_RS00150 91860d5c88afee23292bcae783542ceb 309 Gene3D G3DSA:3.90.1670.10 24 308 1.2E-101 T 28-03-2018 IPR024064 FdhE-like CO704_RS09685 b2f1670da7237445aaee6ea0dde6e2db 269 Gene3D G3DSA:1.25.40.10 59 267 2.4E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS09685 b2f1670da7237445aaee6ea0dde6e2db 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.3E-37 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CO704_RS09685 b2f1670da7237445aaee6ea0dde6e2db 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.2E-25 T 28-03-2018 CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 PRINTS PR01438 Universal stress protein signature 121 143 9.9E-13 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 PRINTS PR01438 Universal stress protein signature 2 20 9.9E-13 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 PRINTS PR01438 Universal stress protein signature 104 116 9.9E-13 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 SUPERFAMILY SSF52402 1 143 4.6E-27 T 28-03-2018 CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 Gene3D G3DSA:3.40.50.620 1 143 1.6E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 Pfam PF00582 Universal stress protein family 1 143 2.7E-25 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS17825 2eabe44bbb9a06ec00f233e88af60d77 143 PIRSF PIRSF006276 1 143 1.3E-18 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS10320 61550bfeeb875e798c77110fb829fd39 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 3.4E-44 T 28-03-2018 IPR019633 Protein of unknown function DUF2498 CO704_RS01240 4aae85b5723a973ce694c1960e826f5b 94 Pfam PF03889 Domain of unknown function 10 46 2.6E-23 T 28-03-2018 IPR005589 Protein of unknown function DUF331 CO704_RS11725 4f785b2b060000fe98e6dc71b9ee805f 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 11 102 6.3E-11 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CO704_RS22520 8067cace1450db69997a3c7aa4ed5145 221 Gene3D G3DSA:3.40.50.1820 34 221 4.1E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS22520 8067cace1450db69997a3c7aa4ed5145 221 SUPERFAMILY SSF53474 23 218 2.51E-11 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS22520 8067cace1450db69997a3c7aa4ed5145 221 Pfam PF02230 Phospholipase/Carboxylesterase 92 149 2.4E-6 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 7.5E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.7E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.7E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.7E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 SUPERFAMILY SSF51735 10 235 1.51E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 234 2.6E-34 T 28-03-2018 CO704_RS21465 646b22062fd881c130dd2b9daf48175a 242 Gene3D G3DSA:3.40.50.720 9 239 1.2E-44 T 28-03-2018 CO704_RS15860 e2f640b178df527c2ccb8c5e6107048d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 314 1.9E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15860 e2f640b178df527c2ccb8c5e6107048d 320 SUPERFAMILY SSF161098 32 312 3.92E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS15860 e2f640b178df527c2ccb8c5e6107048d 320 Gene3D G3DSA:1.10.3720.10 33 320 3.2E-43 T 28-03-2018 CO704_RS14780 901917a2338876dd207f4efa63c21bb4 843 Gene3D G3DSA:3.90.550.10 226 504 1.4E-20 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS14780 901917a2338876dd207f4efa63c21bb4 843 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 67 746 51.787 T 28-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 CO704_RS14780 901917a2338876dd207f4efa63c21bb4 843 Pfam PF00535 Glycosyl transferase family 2 247 429 9.4E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CO704_RS14780 901917a2338876dd207f4efa63c21bb4 843 SUPERFAMILY SSF53448 245 533 4.59E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CO704_RS16725 f2b978c61500c73f63ebb2b02910ae93 247 Gene3D G3DSA:3.40.1390.30 110 218 1.8E-30 T 28-03-2018 CO704_RS16725 f2b978c61500c73f63ebb2b02910ae93 247 SUPERFAMILY SSF102705 1 246 8.37E-83 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CO704_RS16725 f2b978c61500c73f63ebb2b02910ae93 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 234 2.9E-56 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CO704_RS16725 f2b978c61500c73f63ebb2b02910ae93 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 1.5E-78 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CO704_RS16725 f2b978c61500c73f63ebb2b02910ae93 247 Gene3D G3DSA:3.40.1390.30 1 109 3.3E-27 T 28-03-2018 CO704_RS21650 750f7451758df720a4cd53d5a44eaa26 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 4 142 5.9E-66 T 28-03-2018 IPR009385 Plasmid SOS inhibition CO704_RS20025 8398ff0261d79bcb1b51564d80858f54 157 Pfam PF05981 CreA protein 24 155 8.2E-57 T 28-03-2018 IPR010292 Uncharacterised protein family CreA CO704_RS20025 8398ff0261d79bcb1b51564d80858f54 157 PIRSF PIRSF003174 1 157 4.9E-67 T 28-03-2018 IPR010292 Uncharacterised protein family CreA CO704_RS15590 0f882dba7f58d6e829329589319fa024 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.639 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CO704_RS15590 0f882dba7f58d6e829329589319fa024 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.4E-96 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CO704_RS15590 0f882dba7f58d6e829329589319fa024 227 Gene3D G3DSA:3.40.50.300 4 224 1.1E-53 T 28-03-2018 CO704_RS15590 0f882dba7f58d6e829329589319fa024 227 Pfam PF02224 Cytidylate kinase 8 221 4.7E-85 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CO704_RS15590 0f882dba7f58d6e829329589319fa024 227 SUPERFAMILY SSF52540 6 224 1.18E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS05555 a01ffb93485c4ba70291738a026fe177 60 Gene3D G3DSA:1.10.287.620 2 59 3.3E-7 T 28-03-2018 CO704_RS09255 3d665eadae3a5f9cfa8a687ced2fe4f9 176 Gene3D G3DSA:1.20.1550.10 1 176 3.1E-54 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CO704_RS09255 3d665eadae3a5f9cfa8a687ced2fe4f9 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.08 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB CO704_RS09255 3d665eadae3a5f9cfa8a687ced2fe4f9 176 SUPERFAMILY SSF158442 15 161 5.23E-45 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CO704_RS09255 3d665eadae3a5f9cfa8a687ced2fe4f9 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.9E-45 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CO704_RS16845 1a96a6b01e0d9203990651fdb06e2633 239 PIRSF PIRSF028111 2 235 9.0E-64 T 28-03-2018 IPR016868 Bacteriophage B3, Orf5 CO704_RS16845 1a96a6b01e0d9203990651fdb06e2633 239 Pfam PF10979 Protein of unknown function (DUF2786) 7 45 1.4E-12 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 CO704_RS15115 5201afe8ab23eef02e4b4d526aaba94e 329 Gene3D G3DSA:1.10.3470.10 19 324 1.4E-23 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS15115 5201afe8ab23eef02e4b4d526aaba94e 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 317 6.5E-26 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS25680 3127a083b3972be6b6fefe3423266424 158 PIRSF PIRSF020565 1 157 1.6E-46 T 28-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CO704_RS25680 3127a083b3972be6b6fefe3423266424 158 Gene3D G3DSA:3.10.129.10 7 141 5.9E-22 T 28-03-2018 CO704_RS25680 3127a083b3972be6b6fefe3423266424 158 SUPERFAMILY SSF54637 9 145 7.46E-21 T 28-03-2018 IPR029069 HotDog domain CO704_RS20225 58661d9a33a9625193b2613edad4d628 157 Pfam PF12821 Threonine/Serine exporter, ThrE 14 147 2.3E-35 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE CO704_RS20225 58661d9a33a9625193b2613edad4d628 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 39.816 T 28-03-2018 IPR020914 Uncharacterised protein family UPF0442 CO704_RS24940 5865724e3e1dbf4ce3cde584d8aa916a 74 Pfam PF11140 Protein of unknown function (DUF2913) 11 62 5.6E-6 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 CO704_RS10895 495c2c4ebcbabff26757309846dcabec 160 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 152 1.3E-27 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CO704_RS10895 495c2c4ebcbabff26757309846dcabec 160 Gene3D G3DSA:2.60.450.10 16 150 3.8E-20 T 28-03-2018 CO704_RS10895 495c2c4ebcbabff26757309846dcabec 160 Pfam PF03968 OstA-like protein 27 134 2.8E-16 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CO704_RS25160 495c2c4ebcbabff26757309846dcabec 160 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 152 1.3E-27 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CO704_RS25160 495c2c4ebcbabff26757309846dcabec 160 Gene3D G3DSA:2.60.450.10 16 150 3.8E-20 T 28-03-2018 CO704_RS25160 495c2c4ebcbabff26757309846dcabec 160 Pfam PF03968 OstA-like protein 27 134 2.8E-16 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CO704_RS10805 eab3a034dad73be37311c81a549872bf 493 SUPERFAMILY SSF55073 317 475 1.18E-35 T 28-03-2018 IPR029787 Nucleotide cyclase CO704_RS10805 eab3a034dad73be37311c81a549872bf 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 476 1.9E-37 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10805 eab3a034dad73be37311c81a549872bf 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 312 474 2.2E-36 T 28-03-2018 IPR000160 GGDEF domain CO704_RS10805 eab3a034dad73be37311c81a549872bf 493 Gene3D G3DSA:3.30.70.270 302 479 1.3E-43 T 28-03-2018 CO704_RS10805 eab3a034dad73be37311c81a549872bf 493 SMART SM00267 301 478 1.0E-48 T 28-03-2018 IPR000160 GGDEF domain CO704_RS00915 53900314ff296e40110d9b308b9eae4b 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CO704_RS00915 53900314ff296e40110d9b308b9eae4b 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 5.4E-83 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CO704_RS00915 53900314ff296e40110d9b308b9eae4b 268 Gene3D G3DSA:1.20.1080.10 2 259 2.4E-60 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CO704_RS00915 53900314ff296e40110d9b308b9eae4b 268 Pfam PF01226 Formate/nitrite transporter 23 247 3.5E-56 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CO704_RS00915 53900314ff296e40110d9b308b9eae4b 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CO704_RS12410 c45de2a59c2e2a9c4132be1307e6a539 445 Pfam PF07157 DNA circularisation protein N-terminus 17 101 8.3E-24 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS12410 c45de2a59c2e2a9c4132be1307e6a539 445 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 17 156 4.0E-20 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS10135 c45de2a59c2e2a9c4132be1307e6a539 445 Pfam PF07157 DNA circularisation protein N-terminus 17 101 8.3E-24 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS10135 c45de2a59c2e2a9c4132be1307e6a539 445 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 17 156 4.0E-20 T 28-03-2018 IPR009826 DNA circulation, N-terminal CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 Gene3D G3DSA:3.90.76.10 79 194 4.2E-30 T 28-03-2018 CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 PIRSF PIRSF002741 18 559 4.2E-102 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 SUPERFAMILY SSF53850 60 555 4.52E-119 T 28-03-2018 CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 Gene3D G3DSA:3.40.190.10 195 333 1.0E-23 T 28-03-2018 CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 Gene3D G3DSA:3.10.105.10 334 534 9.0E-55 T 28-03-2018 CO704_RS18585 d9d0d2db9a60dc75b05ae124ad362c94 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 487 2.8E-82 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS07715 357c879d5222039861bf2d9f2cfaf0dc 454 PIRSF PIRSF006060 1 446 8.1E-73 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS07715 357c879d5222039861bf2d9f2cfaf0dc 454 Pfam PF00324 Amino acid permease 24 414 1.8E-35 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS12100 2a4a885f58e3df75275d401101312bd1 290 Gene3D G3DSA:3.40.190.10 1 51 7.8E-4 T 28-03-2018 CO704_RS12100 2a4a885f58e3df75275d401101312bd1 290 SUPERFAMILY SSF159501 36 284 6.8E-64 T 28-03-2018 CO704_RS12100 2a4a885f58e3df75275d401101312bd1 290 PIRSF PIRSF020419 1 290 1.4E-104 T 28-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted CO704_RS12100 2a4a885f58e3df75275d401101312bd1 290 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 57 250 1.5E-35 T 28-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN CO704_RS03375 68fa942935e261e4adfc5c694852046d 144 Pfam PF10713 Protein of unknown function (DUF2509) 17 140 7.1E-31 T 28-03-2018 IPR019652 Protein of unknown function DUF2509 CO704_RS16365 360a5cbb2961fa0f8bc4a898e0e3f2bf 442 Pfam PF03573 outer membrane porin, OprD family 33 379 8.4E-14 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CO704_RS16365 360a5cbb2961fa0f8bc4a898e0e3f2bf 442 Gene3D G3DSA:2.40.160.10 3 406 1.0E-42 T 28-03-2018 CO704_RS00350 ab115cef4edc5fe74e6586f756571780 145 Gene3D G3DSA:3.40.50.620 2 142 1.8E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS00350 ab115cef4edc5fe74e6586f756571780 145 PIRSF PIRSF006276 1 141 1.8E-53 T 28-03-2018 IPR006015 Universal stress protein A CO704_RS00350 ab115cef4edc5fe74e6586f756571780 145 SUPERFAMILY SSF52402 3 139 2.68E-32 T 28-03-2018 CO704_RS00350 ab115cef4edc5fe74e6586f756571780 145 Pfam PF00582 Universal stress protein family 3 138 6.1E-21 T 28-03-2018 IPR006016 UspA GO:0006950 CO704_RS14490 6218e865df018dbf1c1fdb99a2648921 286 Hamap MF_01604 Thiamine kinase [thiK]. 3 273 38.518 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CO704_RS14490 6218e865df018dbf1c1fdb99a2648921 286 SUPERFAMILY SSF56112 7 257 1.6E-27 T 28-03-2018 IPR011009 Protein kinase-like domain CO704_RS14490 6218e865df018dbf1c1fdb99a2648921 286 Pfam PF01636 Phosphotransferase enzyme family 33 222 7.5E-12 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CO704_RS14490 6218e865df018dbf1c1fdb99a2648921 286 Gene3D G3DSA:3.90.1200.10 58 282 3.7E-15 T 28-03-2018 CO704_RS20780 ab4bb2a3078c02bfc6d66d2489c03fc4 68 Gene3D G3DSA:3.30.1910.10 1 62 8.1E-32 T 28-03-2018 CO704_RS20780 ab4bb2a3078c02bfc6d66d2489c03fc4 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 9.0E-29 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 CO704_RS20780 ab4bb2a3078c02bfc6d66d2489c03fc4 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.5E-30 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 CO704_RS00550 620cb3052b521c6785470495a2e0f238 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.7E-67 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS00550 620cb3052b521c6785470495a2e0f238 308 Gene3D G3DSA:1.10.3470.10 4 299 5.5E-51 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS20690 e3567fe58fe37f9f69c364c38a72f25e 101 Gene3D G3DSA:1.20.5.1230 3 88 1.4E-5 T 28-03-2018 CO704_RS20690 e3567fe58fe37f9f69c364c38a72f25e 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 4.1E-32 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CO704_RS00530 204c5b4d8353231d6a8231df2f8f935a 414 Pfam PF03222 Tryptophan/tyrosine permease family 23 393 3.1E-29 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CO704_RS09785 40e1ead378c4a40bbc936239719ddc72 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 115 3.6E-30 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CO704_RS20885 8ee1a2f92ca1b9ab92dcfa190d32a604 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS20885 8ee1a2f92ca1b9ab92dcfa190d32a604 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 5.3E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS20885 8ee1a2f92ca1b9ab92dcfa190d32a604 154 Gene3D G3DSA:3.40.930.10 1 154 1.3E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS20885 8ee1a2f92ca1b9ab92dcfa190d32a604 154 SUPERFAMILY SSF55804 7 148 2.49E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS17895 ba352d8f710595c70cc48d4c25779f6e 255 Pfam PF12697 Alpha/beta hydrolase family 30 243 8.6E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS17895 ba352d8f710595c70cc48d4c25779f6e 255 Gene3D G3DSA:3.40.50.1820 20 250 1.1E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS17895 ba352d8f710595c70cc48d4c25779f6e 255 SUPERFAMILY SSF53474 26 247 9.5E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS05780 d5665820c6308d08b935a4c1c1b7cd72 191 Gene3D G3DSA:2.60.460.10 31 190 6.3E-68 T 28-03-2018 CO704_RS05780 d5665820c6308d08b935a4c1c1b7cd72 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 1.0E-81 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 CO704_RS05780 d5665820c6308d08b935a4c1c1b7cd72 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 1.0E-68 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 CO704_RS01085 a654477907c1a425456a867aba294f5b 159 Pfam PF01478 Type IV leader peptidase family 19 125 1.1E-27 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CO704_RS01085 a654477907c1a425456a867aba294f5b 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 106 121 6.4E-22 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CO704_RS01085 a654477907c1a425456a867aba294f5b 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 26 43 6.4E-22 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CO704_RS01085 a654477907c1a425456a867aba294f5b 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 83 93 6.4E-22 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CO704_RS01085 a654477907c1a425456a867aba294f5b 159 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 94 105 6.4E-22 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CO704_RS22915 8dcadaf50f8b5dd18696fa76908b4674 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 3.1E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS22915 8dcadaf50f8b5dd18696fa76908b4674 101 Gene3D G3DSA:3.40.50.2300 2 101 6.4E-37 T 28-03-2018 CO704_RS22915 8dcadaf50f8b5dd18696fa76908b4674 101 SUPERFAMILY SSF52794 1 101 8.37E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 Pfam PF07730 Histidine kinase 361 425 2.8E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 Pfam PF00672 HAMP domain 176 223 2.9E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 SMART SM00304 174 227 4.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 556 3.0E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 PIRSF PIRSF003167 287 564 2.1E-99 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 PIRSF PIRSF003167 1 297 1.0E-71 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 SUPERFAMILY SSF158472 176 225 2.48E-5 T 28-03-2018 CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 SUPERFAMILY SSF55874 431 555 4.11E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 SMART SM00387 465 559 8.4E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 Gene3D G3DSA:3.30.565.10 424 562 1.3E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CO704_RS05705 9d3a6144e51237c69aa859f3a8391fea 569 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 128 4.0E-24 T 28-03-2018 IPR029095 NarX-like, N-terminal CO704_RS24830 fd5089b684dd9e591a8d2d9bb16e71e1 464 Gene3D G3DSA:1.20.1250.20 11 257 5.9E-26 T 28-03-2018 CO704_RS24830 fd5089b684dd9e591a8d2d9bb16e71e1 464 Gene3D G3DSA:1.20.1250.20 258 455 1.3E-21 T 28-03-2018 CO704_RS24830 fd5089b684dd9e591a8d2d9bb16e71e1 464 SUPERFAMILY SSF103473 19 458 1.1E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS24830 fd5089b684dd9e591a8d2d9bb16e71e1 464 Pfam PF00083 Sugar (and other) transporter 80 458 1.8E-31 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CO704_RS18215 43a7745c25343c146502f0f509557ecb 441 Gene3D G3DSA:1.10.287.110 1 203 1.1E-7 T 28-03-2018 IPR001623 DnaJ domain CO704_RS18215 43a7745c25343c146502f0f509557ecb 441 SUPERFAMILY SSF46565 3 47 1.3E-6 T 28-03-2018 IPR001623 DnaJ domain CO704_RS17395 f32a05a55d131179d5beb606bb8fc122 439 Gene3D G3DSA:1.20.120.330 257 435 0.0034 T 28-03-2018 CO704_RS17395 f32a05a55d131179d5beb606bb8fc122 439 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 209 431 7.4E-47 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CO704_RS17395 f32a05a55d131179d5beb606bb8fc122 439 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 6 103 2.6E-13 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CO704_RS02160 979752db3071e630602f2ade797fb34c 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 62 1.2E-9 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CO704_RS02160 979752db3071e630602f2ade797fb34c 70 Gene3D G3DSA:1.10.10.10 21 70 6.4E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14600 5bb338be3e0848b3780bcfc90d57ded8 108 SUPERFAMILY SSF51197 1 104 1.25E-31 T 28-03-2018 CO704_RS14600 5bb338be3e0848b3780bcfc90d57ded8 108 PIRSF PIRSF020632 1 107 2.0E-39 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR CO704_RS14600 5bb338be3e0848b3780bcfc90d57ded8 108 Gene3D G3DSA:2.60.120.10 5 107 2.5E-32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS14600 5bb338be3e0848b3780bcfc90d57ded8 108 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 3.1E-22 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CO704_RS15940 6215fa86ab6f9a8896f0140bac60ecfa 370 Pfam PF03600 Citrate transporter 23 305 1.9E-25 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CO704_RS03330 4790ee5aa609ffa428864458db0d88b7 72 Gene3D G3DSA:2.30.30.100 21 71 2.1E-26 T 28-03-2018 CO704_RS03330 4790ee5aa609ffa428864458db0d88b7 72 SUPERFAMILY SSF50182 21 71 8.18E-19 T 28-03-2018 IPR010920 LSM domain CO704_RS03330 4790ee5aa609ffa428864458db0d88b7 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 9.2E-25 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CO704_RS24465 3f70dbb89246a3280081d48584e3c37c 192 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 191 2.5E-27 T 28-03-2018 IPR031484 Cellulose biosynthesis protein BcsO CO704_RS20085 95ba5894441dc29423c8e9c4b6b5907e 442 Gene3D G3DSA:1.10.10.10 2 35 0.013 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS20085 95ba5894441dc29423c8e9c4b6b5907e 442 Pfam PF07804 HipA-like C-terminal domain 200 386 1.4E-23 T 28-03-2018 IPR012893 HipA-like, C-terminal CO704_RS24735 1ef7996908018892d20d9c2f305ef351 205 Pfam PF01081 KDPG and KHG aldolase 5 182 5.6E-27 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CO704_RS24735 1ef7996908018892d20d9c2f305ef351 205 SUPERFAMILY SSF51569 2 203 1.04E-54 T 28-03-2018 CO704_RS24735 1ef7996908018892d20d9c2f305ef351 205 Gene3D G3DSA:3.20.20.70 1 205 7.4E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS14725 97a68ce2c1facf48640cb94ba8a26217 81 SUPERFAMILY SSF54857 1 80 2.09E-28 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CO704_RS14725 97a68ce2c1facf48640cb94ba8a26217 81 Gene3D G3DSA:3.30.910.10 1 78 3.0E-33 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CO704_RS14725 97a68ce2c1facf48640cb94ba8a26217 81 Pfam PF06183 DinI-like family 14 78 3.6E-30 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CO704_RS02145 70e34e66957a99b2f7e61650eecdf86f 195 SUPERFAMILY SSF116734 11 194 2.78E-10 T 28-03-2018 CO704_RS02145 70e34e66957a99b2f7e61650eecdf86f 195 Gene3D G3DSA:3.90.220.20 3 185 3.8E-9 T 28-03-2018 CO704_RS24305 f738bb33cd9b1f4a65be84a41f46d91f 417 Gene3D G3DSA:3.90.1150.10 300 413 3.5E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS24305 f738bb33cd9b1f4a65be84a41f46d91f 417 SUPERFAMILY SSF53383 23 411 2.34E-59 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS24305 f738bb33cd9b1f4a65be84a41f46d91f 417 Gene3D G3DSA:3.40.640.10 69 299 1.5E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS24305 f738bb33cd9b1f4a65be84a41f46d91f 417 Pfam PF00155 Aminotransferase class I and II 69 391 4.3E-21 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 Gene3D G3DSA:3.40.50.300 271 333 6.6E-8 T 28-03-2018 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 Gene3D G3DSA:3.40.50.300 114 270 1.5E-23 T 28-03-2018 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 SMART SM00382 119 248 9.6E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 SUPERFAMILY SSF52540 5 329 1.81E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 Gene3D G3DSA:3.30.450.90 1 97 4.1E-13 T 28-03-2018 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 330 2.4E-125 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CO704_RS02790 479abf49ec625c35ec7a926b3d77783d 341 Pfam PF00437 Type II/IV secretion system protein 72 266 1.1E-39 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CO704_RS13665 108e603778b2b7356b2143a1e67fe52d 328 Pfam PF01757 Acyltransferase family 7 317 5.8E-17 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS13315 8d5b3a19de62ca4e9651acd9454c66f7 333 SUPERFAMILY SSF51556 5 327 1.45E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS13315 8d5b3a19de62ca4e9651acd9454c66f7 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 5.8E-110 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CO704_RS13315 8d5b3a19de62ca4e9651acd9454c66f7 333 Gene3D G3DSA:3.20.20.140 4 333 1.4E-74 T 28-03-2018 CO704_RS13315 8d5b3a19de62ca4e9651acd9454c66f7 333 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.5E-96 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CO704_RS13315 8d5b3a19de62ca4e9651acd9454c66f7 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.179 T 28-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CO704_RS19905 29182918805263e6e992dba22538e799 390 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 381 2.2E-184 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CO704_RS19905 29182918805263e6e992dba22538e799 390 Gene3D G3DSA:1.20.1530.10 3 387 3.1E-153 T 28-03-2018 IPR023171 Na/H antiporter domain CO704_RS19905 29182918805263e6e992dba22538e799 390 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 387 23.939 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CO704_RS19905 29182918805263e6e992dba22538e799 390 Pfam PF06965 Na+/H+ antiporter 1 7 381 7.3E-150 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CO704_RS02675 7cffb2dca7d6eb44f7359aa53cb71963 364 SUPERFAMILY SSF56796 4 353 1.7E-57 T 28-03-2018 CO704_RS02675 7cffb2dca7d6eb44f7359aa53cb71963 364 Gene3D G3DSA:3.40.50.1970 2 160 3.8E-23 T 28-03-2018 CO704_RS02675 7cffb2dca7d6eb44f7359aa53cb71963 364 PIRSF PIRSF000112 1 357 4.7E-88 T 28-03-2018 CO704_RS02675 7cffb2dca7d6eb44f7359aa53cb71963 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 330 1.3E-42 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS02675 7cffb2dca7d6eb44f7359aa53cb71963 364 Gene3D G3DSA:1.20.1090.10 161 360 2.2E-23 T 28-03-2018 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.5E-21 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.7E-26 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS01780 f7f83ef7f450e211623373cc0ceac913 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.0E-42 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 SMART SM00283 109 356 9.6E-69 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 31 51 7.1E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 236 265 7.1E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 7.1E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 207 234 7.1E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 130 159 7.1E-46 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 167 324 4.6E-45 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 SUPERFAMILY SSF58104 76 357 1.44E-59 T 28-03-2018 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 Gene3D G3DSA:1.10.287.950 57 163 6.5E-11 T 28-03-2018 CO704_RS03200 ac404e7a8f57edb90645c51eebc430cb 387 Gene3D G3DSA:1.10.287.950 164 360 4.5E-44 T 28-03-2018 CO704_RS04385 8307a914c26b8b8704d8a75e0564b675 262 Pfam PF01578 Cytochrome C assembly protein 36 260 6.2E-43 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CO704_RS24985 41e5e988a29dd13a8156c4e8a67b28c4 513 Gene3D G3DSA:3.40.50.1820 25 271 7.8E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS24985 41e5e988a29dd13a8156c4e8a67b28c4 513 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 217 302 1.9E-11 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 CO704_RS24985 41e5e988a29dd13a8156c4e8a67b28c4 513 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 26 195 6.2E-6 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 CO704_RS03325 5dcd9472514d76275b0de16c2d88ec11 347 PRINTS PR00069 Aldo-keto reductase signature 116 134 3.3E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS03325 5dcd9472514d76275b0de16c2d88ec11 347 PRINTS PR00069 Aldo-keto reductase signature 165 182 3.3E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CO704_RS03325 5dcd9472514d76275b0de16c2d88ec11 347 Pfam PF00248 Aldo/keto reductase family 16 338 1.2E-74 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS03325 5dcd9472514d76275b0de16c2d88ec11 347 SUPERFAMILY SSF51430 1 344 1.19E-105 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS03325 5dcd9472514d76275b0de16c2d88ec11 347 Gene3D G3DSA:3.20.20.100 1 347 3.5E-95 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CO704_RS00505 a52b2bd859f910dd650e8e4198b2ef33 351 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 51 351 5.2E-146 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CO704_RS00505 a52b2bd859f910dd650e8e4198b2ef33 351 PIRSF PIRSF003097 50 347 1.4E-104 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 Gene3D G3DSA:3.20.20.70 2 316 1.1E-123 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 3.5E-166 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 SUPERFAMILY SSF51569 1 316 6.52E-118 T 28-03-2018 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.96 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 8.9E-103 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS19935 cccb8bbcf316edc429460b5ac305dd96 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CO704_RS23040 3f4d3475d46c66af060bff2124017523 177 SUPERFAMILY SSF52218 2 173 1.45E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS23040 3f4d3475d46c66af060bff2124017523 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CO704_RS23040 3f4d3475d46c66af060bff2124017523 177 Gene3D G3DSA:3.40.50.360 2 174 1.0E-19 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS23040 3f4d3475d46c66af060bff2124017523 177 Pfam PF12724 Flavodoxin domain 4 152 8.2E-54 T 28-03-2018 IPR026816 Flavodoxin domain CO704_RS08090 3faf8deeb29a3064eb4d42e6a116cdf1 228 Gene3D G3DSA:3.40.1350.10 58 192 3.0E-8 T 28-03-2018 CO704_RS13645 1cd839df2889d23a3a5731350cbe4dc0 426 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 135 412 8.6E-86 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CO704_RS13645 1cd839df2889d23a3a5731350cbe4dc0 426 SUPERFAMILY SSF101960 14 421 2.22E-111 T 28-03-2018 CO704_RS13645 1cd839df2889d23a3a5731350cbe4dc0 426 Pfam PF01458 Uncharacterized protein family (UPF0051) 173 396 9.8E-71 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CO704_RS00355 56d54dda5c2a9f45a5aced66e0d6b603 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.621 T 28-03-2018 IPR019598 Universal stress protein B CO704_RS00355 56d54dda5c2a9f45a5aced66e0d6b603 111 Pfam PF10625 Universal stress protein B (UspB) 1 105 2.8E-54 T 28-03-2018 IPR019598 Universal stress protein B CO704_RS19030 45fb50ff772e8d7c8680bb2fdbd42159 458 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 6 454 2.7E-207 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 CO704_RS19030 45fb50ff772e8d7c8680bb2fdbd42159 458 SUPERFAMILY SSF75304 2 448 2.22E-125 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS19030 45fb50ff772e8d7c8680bb2fdbd42159 458 Gene3D G3DSA:3.90.1300.10 4 450 2.1E-129 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS19030 45fb50ff772e8d7c8680bb2fdbd42159 458 Pfam PF01425 Amidase 22 441 8.7E-99 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS07835 fcf33047e880fecc29b419ed28f532c9 413 Pfam PF00924 Mechanosensitive ion channel 142 395 3.9E-62 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CO704_RS07835 fcf33047e880fecc29b419ed28f532c9 413 SUPERFAMILY SSF50182 186 252 6.21E-12 T 28-03-2018 IPR010920 LSM domain CO704_RS07835 fcf33047e880fecc29b419ed28f532c9 413 Gene3D G3DSA:2.30.30.60 201 251 5.0E-10 T 28-03-2018 CO704_RS02435 c3fcbc30fa7dff88efcadeaac3e2d5ef 225 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 225 36.844 T 28-03-2018 IPR009576 Biofilm formation YgiB CO704_RS02435 c3fcbc30fa7dff88efcadeaac3e2d5ef 225 Pfam PF06693 Protein of unknown function (DUF1190) 41 211 2.7E-56 T 28-03-2018 IPR009576 Biofilm formation YgiB CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 3.9E-150 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 Pfam PF01235 Sodium:alanine symporter family 53 453 7.2E-146 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 411 431 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS19940 35934027fd131e20d59bb57bcf87422a 479 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.9E-49 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CO704_RS25615 377c0a947a0aeda9c7409a01acf963af 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 238 3.8E-59 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CO704_RS14890 598044cb0e2d359c744f2f91c4ec41c6 373 SUPERFAMILY SSF111369 45 288 8.24E-76 T 28-03-2018 CO704_RS14890 598044cb0e2d359c744f2f91c4ec41c6 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 363 1.1E-78 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS14890 598044cb0e2d359c744f2f91c4ec41c6 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 281 1.8E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS14890 598044cb0e2d359c744f2f91c4ec41c6 373 Gene3D G3DSA:2.40.50.100 56 128 2.1E-17 T 28-03-2018 CO704_RS14890 598044cb0e2d359c744f2f91c4ec41c6 373 Gene3D G3DSA:2.40.50.100 160 365 6.1E-6 T 28-03-2018 CO704_RS18850 d0b9a25003a49046979f6d4eb470ec72 102 Gene3D G3DSA:3.30.2310.20 3 98 1.5E-22 T 28-03-2018 CO704_RS18850 d0b9a25003a49046979f6d4eb470ec72 102 SUPERFAMILY SSF143011 7 96 1.83E-12 T 28-03-2018 IPR035095 Toxin RelE-like domain CO704_RS18850 d0b9a25003a49046979f6d4eb470ec72 102 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 7 96 2.4E-27 T 28-03-2018 IPR007711 Toxin HigB-1 CO704_RS15605 7a75414ee726f1d0796edb801cf2c4e8 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.2E-78 T 28-03-2018 IPR003776 YcaO-like domain CO704_RS15605 7a75414ee726f1d0796edb801cf2c4e8 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 5.9E-164 T 28-03-2018 IPR003776 YcaO-like domain CO704_RS20990 b3dd9fec0c2724768451c8540c8ae3e4 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 7.1E-57 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CO704_RS20990 b3dd9fec0c2724768451c8540c8ae3e4 153 Gene3D G3DSA:3.40.50.300 1 153 3.6E-53 T 28-03-2018 CO704_RS20990 b3dd9fec0c2724768451c8540c8ae3e4 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.1E-42 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CO704_RS20990 b3dd9fec0c2724768451c8540c8ae3e4 153 SUPERFAMILY SSF52540 28 137 4.2E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS12735 93aa7d64d3ef12b482ad511b59d1ad24 160 Gene3D G3DSA:2.30.110.20 1 160 7.6E-47 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12735 93aa7d64d3ef12b482ad511b59d1ad24 160 SUPERFAMILY SSF141452 5 159 9.02E-41 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12735 93aa7d64d3ef12b482ad511b59d1ad24 160 Pfam PF05638 Type VI secretion system effector, Hcp 12 146 6.4E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS12735 93aa7d64d3ef12b482ad511b59d1ad24 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.2E-46 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CO704_RS17955 e75dd6e2b9d953be9a5e7691f2b1c049 323 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 17 322 7.5E-68 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CO704_RS17955 e75dd6e2b9d953be9a5e7691f2b1c049 323 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 313 15.534 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CO704_RS17955 e75dd6e2b9d953be9a5e7691f2b1c049 323 Pfam PF01867 CRISPR associated protein Cas1 37 270 4.0E-11 T 28-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CO704_RS17955 e75dd6e2b9d953be9a5e7691f2b1c049 323 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 10 315 3.4E-154 T 28-03-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 CO704_RS18845 de9ffe4242670b1b5da720d07f488c56 113 SUPERFAMILY SSF47413 12 87 3.6E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS18845 de9ffe4242670b1b5da720d07f488c56 113 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 84 9.1E-30 T 28-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CO704_RS18845 de9ffe4242670b1b5da720d07f488c56 113 SMART SM00530 15 70 2.2E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS18845 de9ffe4242670b1b5da720d07f488c56 113 Gene3D G3DSA:1.10.260.40 1 113 2.6E-14 T 28-03-2018 CO704_RS18845 de9ffe4242670b1b5da720d07f488c56 113 Pfam PF01381 Helix-turn-helix 16 67 5.5E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS02875 35fd54b6d0388581be3c99a4e69fdf4e 249 Pfam PF03609 PTS system sorbose-specific iic component 7 238 5.5E-74 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CO704_RS06850 01f7bfae34cab13e9f29ec783bac4a01 188 Pfam PF00877 NlpC/P60 family 79 183 2.1E-32 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CO704_RS06850 01f7bfae34cab13e9f29ec783bac4a01 188 SUPERFAMILY SSF54001 67 185 2.94E-40 T 28-03-2018 CO704_RS06850 01f7bfae34cab13e9f29ec783bac4a01 188 Gene3D G3DSA:3.90.1720.10 62 188 1.1E-39 T 28-03-2018 CO704_RS25905 77ff2e618506e305676be4080663cdc9 112 Pfam PF13560 Helix-turn-helix domain 20 74 2.1E-8 T 28-03-2018 CO704_RS25905 77ff2e618506e305676be4080663cdc9 112 Gene3D G3DSA:1.10.10.60 4 37 3.8E-6 T 28-03-2018 CO704_RS25905 77ff2e618506e305676be4080663cdc9 112 SUPERFAMILY SSF47413 18 75 2.48E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25905 77ff2e618506e305676be4080663cdc9 112 SMART SM00530 23 78 1.3E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25905 77ff2e618506e305676be4080663cdc9 112 Gene3D G3DSA:1.10.260.40 38 92 1.1E-8 T 28-03-2018 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 Pfam PF12833 Helix-turn-helix domain 187 265 1.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 Pfam PF07883 Cupin domain 26 76 1.6E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 SMART SM00342 180 263 1.0E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 Gene3D G3DSA:1.10.10.60 213 272 8.6E-13 T 28-03-2018 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 Gene3D G3DSA:2.60.120.280 19 152 1.0E-14 T 28-03-2018 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 SUPERFAMILY SSF46689 165 213 8.96E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 Gene3D G3DSA:1.10.10.60 157 212 5.3E-11 T 28-03-2018 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 SUPERFAMILY SSF51182 26 130 2.71E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 SUPERFAMILY SSF46689 216 267 1.88E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CO704_RS10300 d6dec41858047f1a581ca2ecb77b3206 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CO704_RS09195 af59b9da2748bec6885d8339f7f4acc7 196 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 192 1.1E-70 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CO704_RS09195 af59b9da2748bec6885d8339f7f4acc7 196 Pfam PF03843 Outer membrane lipoprotein Slp family 21 170 1.7E-49 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CO704_RS09195 af59b9da2748bec6885d8339f7f4acc7 196 PIRSF PIRSF004982 6 192 2.0E-53 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CO704_RS22315 953e89726dd4a05f7e8b3f745849b044 238 Gene3D G3DSA:1.10.10.10 8 135 1.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11535 e0d189094a14d9c48c02031d16ec3bd7 219 Pfam PF11153 Protein of unknown function (DUF2931) 9 217 2.9E-44 T 28-03-2018 IPR021326 Protein of unknown function DUF2931 CO704_RS07995 f6c4749932040794ef6af6f71bf52ec7 246 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS07995 f6c4749932040794ef6af6f71bf52ec7 246 SMART SM00382 34 222 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS07995 f6c4749932040794ef6af6f71bf52ec7 246 Pfam PF00005 ABC transporter 26 160 4.8E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS07995 f6c4749932040794ef6af6f71bf52ec7 246 SUPERFAMILY SSF52540 9 206 1.11E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS07995 f6c4749932040794ef6af6f71bf52ec7 246 Gene3D G3DSA:3.40.50.300 6 225 6.4E-53 T 28-03-2018 CO704_RS04000 8ec773712ea422dec460182fb2d3e750 151 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 2.0E-62 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CO704_RS04000 8ec773712ea422dec460182fb2d3e750 151 Pfam PF06610 L-alanine exporter 4 141 9.2E-68 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CO704_RS04000 8ec773712ea422dec460182fb2d3e750 151 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 33.481 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CO704_RS20685 9bcf894ad201bbc99b8da981b47a61eb 122 Pfam PF06476 Protein of unknown function (DUF1090) 9 115 3.6E-35 T 28-03-2018 IPR009468 Protein of unknown function DUF1090 CO704_RS25900 c8b46bca9ed24d139660660afa59721d 425 Pfam PF07804 HipA-like C-terminal domain 170 386 5.9E-46 T 28-03-2018 IPR012893 HipA-like, C-terminal CO704_RS25900 c8b46bca9ed24d139660660afa59721d 425 Pfam PF13657 HipA N-terminal domain 25 125 4.6E-6 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CO704_RS04885 bd33c3ed4ed00566fab08e1e1d40b910 215 PIRSF PIRSF008159 1 215 2.7E-68 T 28-03-2018 IPR016537 Uncharacterised conserved protein UCP008159, CO704_RS04885 bd33c3ed4ed00566fab08e1e1d40b910 215 Pfam PF06226 Protein of unknown function (DUF1007) 12 214 1.4E-60 T 28-03-2018 IPR010412 Protein of unknown function DUF1007 CO704_RS25225 aa4ab7a422b653baafbd011b640e910a 408 Pfam PF05231 MASE1 11 291 5.7E-10 T 28-03-2018 IPR007895 MASE1 CO704_RS17285 75b8a5fb695271c4530b5cecbd6ba716 68 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 68 25.612 T 28-03-2018 IPR024905 Sec-independent protein translocase protein TatE CO704_RS17285 75b8a5fb695271c4530b5cecbd6ba716 68 Pfam PF02416 mttA/Hcf106 family 4 50 4.6E-13 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CO704_RS17285 75b8a5fb695271c4530b5cecbd6ba716 68 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 4.0E-20 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CO704_RS17285 75b8a5fb695271c4530b5cecbd6ba716 68 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 64 20.936 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CO704_RS05765 48ca24b2e951713b2d45d894f4499839 290 SMART SM00646 119 274 6.6E-65 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS05765 48ca24b2e951713b2d45d894f4499839 290 Gene3D G3DSA:3.40.630.40 45 278 3.8E-56 T 28-03-2018 CO704_RS05765 48ca24b2e951713b2d45d894f4499839 290 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 60 273 1.4E-49 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS05765 48ca24b2e951713b2d45d894f4499839 290 SUPERFAMILY SSF53187 58 153 2.01E-52 T 28-03-2018 CO704_RS05765 48ca24b2e951713b2d45d894f4499839 290 SUPERFAMILY SSF53187 201 278 2.01E-52 T 28-03-2018 CO704_RS21975 5f354fa1091df542be7c813ae0ff7592 238 Gene3D G3DSA:1.20.5.730 39 134 4.6E-4 T 28-03-2018 CO704_RS19500 c1a48a825fa7233f5c04019e5f6d064b 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 4.5E-42 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CO704_RS19500 c1a48a825fa7233f5c04019e5f6d064b 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 8.0E-54 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CO704_RS19500 c1a48a825fa7233f5c04019e5f6d064b 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.381 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CO704_RS19500 c1a48a825fa7233f5c04019e5f6d064b 120 PIRSF PIRSF006287 1 120 2.2E-48 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CO704_RS03765 2ad0a9d31364c222e6ccb7779f7710ab 256 Gene3D G3DSA:1.10.3680.10 11 100 0.0018 T 28-03-2018 IPR029024 TerB-like CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.4E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.0E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 SUPERFAMILY SSF51735 4 251 2.38E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 Gene3D G3DSA:3.40.50.720 1 38 5.8E-6 T 28-03-2018 CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 Gene3D G3DSA:3.40.50.720 39 252 6.1E-54 T 28-03-2018 CO704_RS24645 1761141b3bf556a179bd5b0fe77616fe 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 8.9E-51 T 28-03-2018 CO704_RS14795 90fc3d844ad84d8b628492d093eddfa9 176 Pfam PF01661 Macro domain 21 137 4.3E-43 T 28-03-2018 IPR002589 Macro domain CO704_RS14795 90fc3d844ad84d8b628492d093eddfa9 176 Gene3D G3DSA:3.40.220.10 1 175 2.3E-71 T 28-03-2018 CO704_RS14795 90fc3d844ad84d8b628492d093eddfa9 176 SMART SM00506 4 137 1.1E-56 T 28-03-2018 IPR002589 Macro domain CO704_RS14795 90fc3d844ad84d8b628492d093eddfa9 176 SUPERFAMILY SSF52949 4 171 5.55E-65 T 28-03-2018 CO704_RS14795 90fc3d844ad84d8b628492d093eddfa9 176 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 46.456 T 28-03-2018 IPR024900 O-acetyl-ADP-ribose deacetylase CO704_RS11805 1c083fedec8133a6642e967b454b0cc7 164 Gene3D G3DSA:3.30.300.130 8 105 4.7E-20 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CO704_RS11805 1c083fedec8133a6642e967b454b0cc7 164 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 21 164 3.1E-65 T 28-03-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CO704_RS11805 1c083fedec8133a6642e967b454b0cc7 164 SUPERFAMILY SSF117916 12 104 3.27E-21 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CO704_RS11805 1c083fedec8133a6642e967b454b0cc7 164 Pfam PF01883 Iron-sulfur cluster assembly protein 12 76 5.6E-11 T 28-03-2018 IPR002744 MIP18 family-like CO704_RS11325 a1165c2736599724d90085fe97532b3a 213 Pfam PF01966 HD domain 32 117 4.2E-7 T 28-03-2018 IPR006674 HD domain CO704_RS11325 a1165c2736599724d90085fe97532b3a 213 SUPERFAMILY SSF109604 31 135 1.1E-15 T 28-03-2018 CO704_RS11325 a1165c2736599724d90085fe97532b3a 213 Gene3D G3DSA:1.10.472.50 13 111 5.0E-15 T 28-03-2018 CO704_RS15245 f411048d378ff86c8967672613897805 254 Pfam PF13643 Domain of unknown function (DUF4145) 123 204 9.2E-7 T 28-03-2018 IPR025285 Domain of unknown function DUF4145 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 PRINTS PR00412 Epoxide hydrolase signature 143 156 4.5E-14 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 PRINTS PR00412 Epoxide hydrolase signature 61 79 4.5E-14 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 PRINTS PR00412 Epoxide hydrolase signature 129 142 4.5E-14 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 PRINTS PR00412 Epoxide hydrolase signature 81 96 4.5E-14 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 PRINTS PR00412 Epoxide hydrolase signature 302 324 4.5E-14 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 Pfam PF00561 alpha/beta hydrolase fold 56 185 2.0E-22 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 Gene3D G3DSA:3.40.50.1820 34 324 2.6E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS20605 e99da47b3d9228f968ddf2873bf4c2b6 327 SUPERFAMILY SSF53474 35 323 2.03E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS21135 89e95c06617f257b8869e0f39f3e42c0 629 Gene3D G3DSA:3.20.20.70 211 572 1.5E-23 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS21135 89e95c06617f257b8869e0f39f3e42c0 629 SUPERFAMILY SSF51445 218 525 1.26E-30 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS22705 0c92402214a731b9533457ac589348b9 296 SUPERFAMILY SSF161098 8 296 1.4E-69 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22705 0c92402214a731b9533457ac589348b9 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 289 4.2E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS22705 0c92402214a731b9533457ac589348b9 296 Gene3D G3DSA:1.10.3720.10 1 283 1.3E-44 T 28-03-2018 CO704_RS17205 d02652b03e71e60dc3a5b958786d77eb 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.0E-54 T 28-03-2018 IPR009912 Zinc-ribbon containing domain CO704_RS07750 da26342810a85f6f3e0ddc311b80a4b9 111 Pfam PF04363 Protein of unknown function (DUF496) 8 99 1.3E-45 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CO704_RS07750 da26342810a85f6f3e0ddc311b80a4b9 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.554 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CO704_RS07750 da26342810a85f6f3e0ddc311b80a4b9 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 3.0E-42 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CO704_RS07750 da26342810a85f6f3e0ddc311b80a4b9 111 PIRSF PIRSF028773 1 111 4.3E-52 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CO704_RS15335 92160f55c722a63d303269145bb73d8e 137 Pfam PF13380 CoA binding domain 14 130 2.8E-38 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS15335 92160f55c722a63d303269145bb73d8e 137 SUPERFAMILY SSF51735 5 135 1.4E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15335 92160f55c722a63d303269145bb73d8e 137 SMART SM00881 10 104 1.3E-25 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CO704_RS15335 92160f55c722a63d303269145bb73d8e 137 Gene3D G3DSA:3.40.50.720 10 134 5.9E-32 T 28-03-2018 CO704_RS12680 20844df937dfd03f3550d4a8294606c7 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.9E-134 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CO704_RS12680 20844df937dfd03f3550d4a8294606c7 370 Pfam PF01098 Cell cycle protein 21 364 3.0E-117 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CO704_RS12680 20844df937dfd03f3550d4a8294606c7 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CO704_RS01865 10cbdd4718f6ffbd854a3bdee1618c0b 167 Gene3D G3DSA:3.40.630.30 1 128 5.9E-18 T 28-03-2018 CO704_RS01865 10cbdd4718f6ffbd854a3bdee1618c0b 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 2.6E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS01865 10cbdd4718f6ffbd854a3bdee1618c0b 167 SUPERFAMILY SSF55729 1 146 1.92E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS09270 aca9bb272f03f5ce3f0529ac4dae7a79 510 Pfam PF04293 SpoVR like protein 20 451 6.1E-179 T 28-03-2018 IPR007390 Sporulation stage V, protein R CO704_RS19480 92ce0158e4f027c9ef5bf0cc89f77e17 182 Gene3D G3DSA:3.40.50.2020 5 179 3.9E-41 T 28-03-2018 CO704_RS19480 92ce0158e4f027c9ef5bf0cc89f77e17 182 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 11 177 1.3E-73 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CO704_RS19480 92ce0158e4f027c9ef5bf0cc89f77e17 182 Pfam PF00156 Phosphoribosyl transferase domain 17 164 5.1E-25 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS19480 92ce0158e4f027c9ef5bf0cc89f77e17 182 SUPERFAMILY SSF53271 4 178 2.36E-53 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS03140 b587e319cf8a8b36076a650c66ddf940 935 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 606 686 2.6E-25 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS03140 b587e319cf8a8b36076a650c66ddf940 935 Gene3D G3DSA:3.40.390.10 699 909 5.8E-12 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CO704_RS08015 1faf71e8c0e3b1a49e4af307c6536ef4 242 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 29 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS08015 1faf71e8c0e3b1a49e4af307c6536ef4 242 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.3E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS08015 1faf71e8c0e3b1a49e4af307c6536ef4 242 SUPERFAMILY SSF46955 2 93 2.24E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS08015 1faf71e8c0e3b1a49e4af307c6536ef4 242 Gene3D G3DSA:1.10.1660.10 1 141 1.6E-24 T 28-03-2018 CO704_RS08015 1faf71e8c0e3b1a49e4af307c6536ef4 242 SMART SM00422 3 72 1.0E-23 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS08740 c24c524911c5c5a6cf56b21ada84f05a 318 SMART SM00972 258 315 3.3E-4 T 28-03-2018 IPR007893 Spore coat protein U CO704_RS08740 c24c524911c5c5a6cf56b21ada84f05a 318 Pfam PF05229 Spore Coat Protein U domain 23 154 5.9E-11 T 28-03-2018 IPR007893 Spore coat protein U CO704_RS08740 c24c524911c5c5a6cf56b21ada84f05a 318 Pfam PF05229 Spore Coat Protein U domain 183 315 2.1E-21 T 28-03-2018 IPR007893 Spore coat protein U CO704_RS06325 0269cb9ea7ab3347601edcf49756bde7 393 SUPERFAMILY SSF103473 17 392 5.36E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS06325 0269cb9ea7ab3347601edcf49756bde7 393 Gene3D G3DSA:1.20.1250.20 212 393 3.2E-19 T 28-03-2018 CO704_RS06325 0269cb9ea7ab3347601edcf49756bde7 393 Gene3D G3DSA:1.20.1250.20 11 210 8.1E-18 T 28-03-2018 CO704_RS06325 0269cb9ea7ab3347601edcf49756bde7 393 Pfam PF07690 Major Facilitator Superfamily 225 391 2.1E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS13960 c3782d805a2e3c4992548391ef615dbb 209 Pfam PF09335 SNARE associated Golgi protein 53 170 1.7E-21 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS12845 4615b46eb7e26f3eb8bd87c51ff93eb5 151 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 6 134 9.9E-19 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 CO704_RS12845 4615b46eb7e26f3eb8bd87c51ff93eb5 151 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 2 134 8.0E-14 T 28-03-2018 CO704_RS12845 4615b46eb7e26f3eb8bd87c51ff93eb5 151 Pfam PF13994 PgaD-like protein 6 132 6.9E-20 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 CO704_RS16650 3463e3ee2e8e8b53f0d1972ec44beb9d 379 PIRSF PIRSF000267 2 378 1.8E-131 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS16650 3463e3ee2e8e8b53f0d1972ec44beb9d 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 2.5E-109 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS16650 3463e3ee2e8e8b53f0d1972ec44beb9d 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 8.5E-199 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CO704_RS11460 c91229c23960b2607bc7ea7b23116f2b 73 Pfam PF04325 Protein of unknown function (DUF465) 19 66 3.2E-10 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 SUPERFAMILY SSF53383 1 396 4.47E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 Gene3D G3DSA:3.90.1150.10 241 396 7.9E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 Gene3D G3DSA:3.90.1150.10 1 156 2.0E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS15500 6316519a5403b74daa7600180bdf3468 396 Pfam PF00155 Aminotransferase class I and II 27 392 4.7E-91 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS06065 ab227b169ab88400bb65de0ed5cf99e2 157 Gene3D G3DSA:3.10.450.50 15 154 4.5E-26 T 28-03-2018 CO704_RS06065 ab227b169ab88400bb65de0ed5cf99e2 157 SUPERFAMILY SSF54427 24 149 5.61E-26 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS06065 ab227b169ab88400bb65de0ed5cf99e2 157 Pfam PF07366 SnoaL-like polyketide cyclase 27 146 1.8E-21 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CO704_RS21065 d26f64dec7d2aca2a8e533cc637f664f 387 Pfam PF07690 Major Facilitator Superfamily 23 323 8.3E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS21065 d26f64dec7d2aca2a8e533cc637f664f 387 Gene3D G3DSA:1.20.1250.20 20 189 1.1E-14 T 28-03-2018 CO704_RS21065 d26f64dec7d2aca2a8e533cc637f664f 387 Gene3D G3DSA:1.20.1250.20 197 387 5.3E-17 T 28-03-2018 CO704_RS21065 d26f64dec7d2aca2a8e533cc637f664f 387 SUPERFAMILY SSF103473 22 383 7.98E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS15715 7193966777123116d4483d71e5663bb3 106 SUPERFAMILY SSF54736 21 105 3.5E-33 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CO704_RS15715 7193966777123116d4483d71e5663bb3 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.319 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CO704_RS15715 7193966777123116d4483d71e5663bb3 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 1.1E-33 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CO704_RS15715 7193966777123116d4483d71e5663bb3 106 Gene3D G3DSA:3.30.1390.10 13 105 3.6E-36 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 PIRSF PIRSF006004 15 380 5.4E-149 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 20 367 75.384 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 Pfam PF04055 Radical SAM superfamily 123 292 1.3E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 Gene3D G3DSA:3.20.20.70 29 381 8.0E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 SUPERFAMILY SSF102114 119 329 9.29E-15 T 28-03-2018 CO704_RS04975 92158d64f0f0a2448de6abba3ba87220 387 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 372 2.0E-174 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CO704_RS01670 010eaff94adf93940a0130d924f61237 271 SUPERFAMILY SSF52540 8 236 1.42E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS01670 010eaff94adf93940a0130d924f61237 271 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS01670 010eaff94adf93940a0130d924f61237 271 Gene3D G3DSA:3.40.50.300 5 251 1.6E-60 T 28-03-2018 CO704_RS01670 010eaff94adf93940a0130d924f61237 271 SMART SM00382 33 229 8.5E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS01670 010eaff94adf93940a0130d924f61237 271 Pfam PF00005 ABC transporter 25 172 1.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS23890 71433b47b3fb5e8d4ed5c7f427442eb8 400 Pfam PF03616 Sodium/glutamate symporter 2 366 3.1E-164 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CO704_RS23890 71433b47b3fb5e8d4ed5c7f427442eb8 400 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.2E-197 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CO704_RS23890 71433b47b3fb5e8d4ed5c7f427442eb8 400 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 25.063 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CO704_RS21905 b9a135e679893956751a504903f493ef 509 Pfam PF03743 Bacterial conjugation TrbI-like protein 375 481 3.8E-6 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CO704_RS21905 b9a135e679893956751a504903f493ef 509 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 495 6.7E-175 T 28-03-2018 IPR021207 Integrating conjugative element protein, PFL4705 CO704_RS21905 b9a135e679893956751a504903f493ef 509 Gene3D G3DSA:1.20.1170.10 29 436 2.9E-9 T 28-03-2018 CO704_RS02405 dc7948d21c277704290e6f8e02c6616d 444 Pfam PF07690 Major Facilitator Superfamily 50 392 2.3E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS02405 dc7948d21c277704290e6f8e02c6616d 444 SUPERFAMILY SSF103473 32 439 3.79E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02405 dc7948d21c277704290e6f8e02c6616d 444 Gene3D G3DSA:1.20.1250.20 241 441 4.6E-19 T 28-03-2018 CO704_RS02405 dc7948d21c277704290e6f8e02c6616d 444 Gene3D G3DSA:1.20.1250.20 22 234 7.7E-23 T 28-03-2018 CO704_RS21960 a624fdb9946f9df26d31196b87b68aaf 178 Pfam PF11072 Protein of unknown function (DUF2859) 32 172 5.8E-51 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 CO704_RS21960 a624fdb9946f9df26d31196b87b68aaf 178 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 70 174 4.8E-40 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 CO704_RS06860 b6ac8284f0b218622e708aca6f0265e6 234 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 232 40.692 T 28-03-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 CO704_RS06860 b6ac8284f0b218622e708aca6f0265e6 234 SUPERFAMILY SSF48317 7 219 2.75E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS06860 b6ac8284f0b218622e708aca6f0265e6 234 SMART SM00014 91 209 6.9E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS06860 b6ac8284f0b218622e708aca6f0265e6 234 Pfam PF01569 PAP2 superfamily 137 200 1.2E-6 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS06860 b6ac8284f0b218622e708aca6f0265e6 234 Gene3D G3DSA:1.20.144.10 17 221 7.9E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CO704_RS10525 3498ea539c1cc67b5178cd404cc0ac97 88 Gene3D G3DSA:3.30.60.20 38 63 0.001 T 28-03-2018 CO704_RS10525 3498ea539c1cc67b5178cd404cc0ac97 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 67 1.3E-12 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CO704_RS10525 3498ea539c1cc67b5178cd404cc0ac97 88 SUPERFAMILY SSF57716 38 71 9.98E-7 T 28-03-2018 CO704_RS07070 cdc2e8bdd1f457ba8939ca7b33480712 231 Pfam PF04172 LrgB-like family 12 223 1.6E-77 T 28-03-2018 IPR007300 CidB/LrgB family CO704_RS07070 cdc2e8bdd1f457ba8939ca7b33480712 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 6.1E-103 T 28-03-2018 IPR005261 Conserved hypothetical protein CHP00659 CO704_RS02035 e6a1406e60e3c1a494408c371670114b 169 Gene3D G3DSA:3.40.630.30 1 151 4.2E-27 T 28-03-2018 CO704_RS02035 e6a1406e60e3c1a494408c371670114b 169 SUPERFAMILY SSF55729 11 168 4.8E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS02035 e6a1406e60e3c1a494408c371670114b 169 Pfam PF00583 Acetyltransferase (GNAT) family 48 146 5.7E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS20135 56fb076e00f7cf07b06f7730c8b7244f 203 SMART SM00749 62 125 2.0E-11 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CO704_RS20135 56fb076e00f7cf07b06f7730c8b7244f 203 SMART SM00749 141 203 5.3E-9 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CO704_RS20135 56fb076e00f7cf07b06f7730c8b7244f 203 Pfam PF04972 BON domain 57 124 5.0E-20 T 28-03-2018 IPR007055 BON domain CO704_RS20135 56fb076e00f7cf07b06f7730c8b7244f 203 Pfam PF04972 BON domain 137 203 3.1E-20 T 28-03-2018 IPR007055 BON domain CO704_RS15445 195b972565a616cf2da8b73ea641e61e 180 Pfam PF07126 Cell-division protein ZapC 3 167 9.6E-69 T 28-03-2018 IPR009809 Cell division protein ZapC CO704_RS15445 195b972565a616cf2da8b73ea641e61e 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 39.295 T 28-03-2018 IPR009809 Cell division protein ZapC CO704_RS15445 195b972565a616cf2da8b73ea641e61e 180 PIRSF PIRSF010252 1 177 6.9E-64 T 28-03-2018 IPR009809 Cell division protein ZapC CO704_RS09070 6d800083557f8913fc9973ede058ed0c 79 Pfam PF13996 YobH-like protein 2 71 6.5E-40 T 28-03-2018 IPR025611 YobH-like protein CO704_RS16735 544238a2967379f607f196ab88c58097 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.8E-37 T 28-03-2018 IPR019663 Uncharacterised protein YbfA CO704_RS11465 a31ba4c79be2332ba4613d11fd2ab8e6 462 Gene3D G3DSA:3.40.50.1110 114 453 6.6E-5 T 28-03-2018 CO704_RS22470 16cb435eb18ac78cdb4b4a14cb926571 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 4.1E-34 T 28-03-2018 IPR007436 Protein of unknown function DUF485 CO704_RS06470 732ad450115c8f0164b6ea7b6c6a35b0 147 SUPERFAMILY SSF55804 2 146 6.41E-39 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06470 732ad450115c8f0164b6ea7b6c6a35b0 147 Gene3D G3DSA:3.40.930.10 1 146 1.3E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CO704_RS06470 732ad450115c8f0164b6ea7b6c6a35b0 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.8E-36 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CO704_RS21605 d5e55fed1b5bb921e4b4b5b7c3a6ccf7 307 Pfam PF13737 Transposase DDE domain 19 130 5.8E-44 T 28-03-2018 IPR025668 Transposase DDE domain CO704_RS00575 4d56db7d5945835c6645be4fd6e22455 295 Gene3D G3DSA:1.10.3720.10 13 295 3.4E-43 T 28-03-2018 CO704_RS00575 4d56db7d5945835c6645be4fd6e22455 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 1.5E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS00575 4d56db7d5945835c6645be4fd6e22455 295 SUPERFAMILY SSF161098 56 282 3.14E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS25670 6832b2d4eef5c6e6c840ee6b18119a93 190 Pfam PF11659 Protein of unknown function (DUF3261) 50 188 1.0E-34 T 28-03-2018 IPR021675 Protein of unknown function DUF3261 CO704_RS22715 fd0c86921b3cf8b9f74bbf5a8706d2b4 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 4.5E-265 T 28-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH CO704_RS22080 d322b72e3f6008cdd6c905339d267c04 88 Pfam PF05488 PAAR motif 9 80 9.4E-23 T 28-03-2018 IPR008727 PAAR motif CO704_RS09425 056c7c42b6a826e196e48e2677e40bd6 398 Pfam PF02515 CoA-transferase family III 8 374 1.4E-128 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 CO704_RS09425 056c7c42b6a826e196e48e2677e40bd6 398 Gene3D G3DSA:3.40.50.10540 2 398 1.1E-144 T 28-03-2018 IPR023606 CoA-transferase family III domain CO704_RS09425 056c7c42b6a826e196e48e2677e40bd6 398 SUPERFAMILY SSF89796 4 398 1.23E-133 T 28-03-2018 IPR023606 CoA-transferase family III domain CO704_RS22720 4a88250811a3953d29c3877d44ee7826 245 Pfam PF06251 Capsule biosynthesis GfcC 19 244 4.1E-77 T 28-03-2018 IPR010425 Domain of unknown function DUF1017 CO704_RS02200 1d80069e43758d826db9c99b0d7d97ed 116 SUPERFAMILY SSF143737 5 115 6.41E-54 T 28-03-2018 CO704_RS02200 1d80069e43758d826db9c99b0d7d97ed 116 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 16 115 3.6E-52 T 28-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CO704_RS02200 1d80069e43758d826db9c99b0d7d97ed 116 Gene3D G3DSA:3.30.450.20 24 116 2.6E-51 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 SUPERFAMILY SSF111369 170 284 1.31E-15 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 Pfam PF00529 HlyD membrane-fusion protein of T1SS 29 336 3.3E-6 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 Gene3D G3DSA:2.40.50.100 49 115 3.8E-13 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 SUPERFAMILY SSF111369 50 103 1.07E-6 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 SUPERFAMILY SSF111369 139 167 1.07E-6 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 Gene3D G3DSA:1.20.1600.10 170 311 1.8E-21 T 28-03-2018 CO704_RS03190 d792696047681235661713dc58cbb8fa 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 291 4.6E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 Pfam PF12566 Protein of unknown function (DUF3748) 63 180 7.2E-57 T 28-03-2018 IPR022223 Protein of unknown function DUF3748 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 Gene3D G3DSA:2.140.10.30 1 162 9.0E-6 T 28-03-2018 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 Gene3D G3DSA:2.140.10.30 220 406 1.1E-21 T 28-03-2018 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 Pfam PF07676 WD40-like Beta Propeller Repeat 392 415 0.11 T 28-03-2018 IPR011659 WD40-like Beta Propeller CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 SUPERFAMILY SSF82171 288 416 1.96E-19 T 28-03-2018 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 SUPERFAMILY SSF82171 19 93 1.96E-19 T 28-03-2018 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 SUPERFAMILY SSF82171 241 252 1.96E-19 T 28-03-2018 CO704_RS24760 d1ec398ba5a80b537263d9f8ca1c0d7a 421 SUPERFAMILY SSF82171 122 146 1.96E-19 T 28-03-2018 CO704_RS11265 caa2509b6f18b13c128d35f19674eb0a 325 Gene3D G3DSA:3.40.50.720 5 228 1.2E-9 T 28-03-2018 CO704_RS11265 caa2509b6f18b13c128d35f19674eb0a 325 SUPERFAMILY SSF51735 8 103 1.53E-9 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS11265 caa2509b6f18b13c128d35f19674eb0a 325 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 10 82 1.3E-5 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CO704_RS17760 bf3622b9d92e44091787e6113590e9a0 203 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 2 199 9.1E-27 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS17760 bf3622b9d92e44091787e6113590e9a0 203 Pfam PF09850 Type VI secretion system protein DotU 3 201 5.0E-33 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CO704_RS14365 f5b9d6424aa8bf5fe3db536df70fae90 285 SUPERFAMILY SSF161098 5 274 5.98E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14365 f5b9d6424aa8bf5fe3db536df70fae90 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 5.2E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14365 f5b9d6424aa8bf5fe3db536df70fae90 285 Gene3D G3DSA:1.10.3720.10 9 284 6.2E-43 T 28-03-2018 CO704_RS06110 89763229c24db82066e2885794a2f114 671 Pfam PF04632 Fusaric acid resistance protein family 28 660 5.0E-157 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CO704_RS06110 89763229c24db82066e2885794a2f114 671 Gene3D G3DSA:1.10.10.10 573 632 0.0025 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS24520 088b6255e637b4ca8dce1efe791e1888 558 SUPERFAMILY SSF53649 268 466 8.07E-11 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CO704_RS24520 088b6255e637b4ca8dce1efe791e1888 558 Gene3D G3DSA:3.40.720.10 211 500 1.7E-17 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CO704_RS24520 088b6255e637b4ca8dce1efe791e1888 558 Pfam PF00884 Sulfatase 223 472 3.0E-16 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CO704_RS14405 9ed62b8e4e1e1077c65478559b46c525 354 Pfam PF01757 Acyltransferase family 7 319 2.2E-25 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 98 110 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 22 41 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 1.0E-37 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 Pfam PF00765 Autoinducer synthase 20 191 6.7E-47 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 ProSitePatterns PS00949 Autoinducer synthase family signature. 26 51 - T 28-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 SUPERFAMILY SSF55729 7 187 3.43E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS07930 557965327e94d5345ca6917fe8d412d2 211 Gene3D G3DSA:3.40.630.30 4 209 1.8E-32 T 28-03-2018 CO704_RS21995 1e71ab27858376b89f749f8b090983f0 162 Pfam PF12101 Protein of unknown function (DUF3577) 17 145 4.8E-56 T 28-03-2018 IPR021960 Protein of unknown function DUF3577 CO704_RS07225 6ded59afa2a15e5a8e4391229716c4cf 336 Gene3D G3DSA:3.40.50.1820 26 336 2.0E-58 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS07225 6ded59afa2a15e5a8e4391229716c4cf 336 Pfam PF07859 alpha/beta hydrolase fold 102 308 4.0E-70 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CO704_RS07225 6ded59afa2a15e5a8e4391229716c4cf 336 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 101 117 - T 28-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 CO704_RS07225 6ded59afa2a15e5a8e4391229716c4cf 336 SUPERFAMILY SSF53474 45 335 3.27E-70 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS09165 ef5fc82555c8db5d5e6fc1ccf977c43f 198 Gene3D G3DSA:3.90.79.10 7 188 8.2E-41 T 28-03-2018 CO704_RS09165 ef5fc82555c8db5d5e6fc1ccf977c43f 198 Pfam PF00293 NUDIX domain 29 143 6.0E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS09165 ef5fc82555c8db5d5e6fc1ccf977c43f 198 SUPERFAMILY SSF55811 8 181 7.18E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS09165 ef5fc82555c8db5d5e6fc1ccf977c43f 198 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 28-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CO704_RS07595 b0028486447f2a260f87c2431e2ef6c5 411 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 21 397 2.9E-30 T 28-03-2018 CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 Gene3D G3DSA:3.30.9.10 166 319 4.7E-30 T 28-03-2018 CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 Pfam PF04324 BFD-like [2Fe-2S] binding domain 399 452 4.9E-7 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 SUPERFAMILY SSF51905 8 317 1.77E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 Gene3D G3DSA:3.30.9.10 90 165 2.3E-7 T 28-03-2018 CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 Gene3D G3DSA:3.50.50.60 2 73 3.2E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS10930 3c2c7790e4709109c3c5c9dfd794e54d 465 Pfam PF01266 FAD dependent oxidoreductase 9 355 2.2E-50 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS24425 4f1a1bed4f2a7bc0a8997c507073fb8d 249 Gene3D G3DSA:3.20.20.150 1 248 1.0E-25 T 28-03-2018 CO704_RS24425 4f1a1bed4f2a7bc0a8997c507073fb8d 249 SUPERFAMILY SSF51658 4 248 3.73E-57 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CO704_RS18955 b286fd1ba5d27a44c7a0523438667f1a 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 31.948 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CO704_RS18955 b286fd1ba5d27a44c7a0523438667f1a 133 Pfam PF07417 Transcriptional regulator Crl 5 122 1.1E-52 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CO704_RS02415 6816a4a3fff41bfce738e01b25aaab05 90 Pfam PF04380 Membrane fusogenic activity 5 81 2.7E-29 T 28-03-2018 IPR007475 Membrane fusogenic activity CO704_RS09720 07c52cf22c1bb8a175d445f165fd9c18 466 Pfam PF11924 Inverse autotransporter, beta-domain 63 340 3.7E-100 T 28-03-2018 IPR024519 Inverse autotransporter, beta-domain CO704_RS25660 ac401fa1db8c10110a7db4d29344d033 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 187 3.2E-9 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CO704_RS25660 ac401fa1db8c10110a7db4d29344d033 201 Gene3D G3DSA:2.50.20.10 17 194 8.0E-16 T 28-03-2018 CO704_RS25660 ac401fa1db8c10110a7db4d29344d033 201 SUPERFAMILY SSF89392 20 187 2.08E-19 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 Pfam PF00267 Gram-negative porin 27 365 4.6E-141 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 276 295 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 6.8E-69 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 2.8E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 2.8E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.8E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 2.8E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 2.8E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 SUPERFAMILY SSF56935 22 365 5.76E-80 T 28-03-2018 CO704_RS18950 f69572e481924df4f10c8ea96761df19 365 Gene3D G3DSA:2.40.160.10 32 365 1.2E-52 T 28-03-2018 CO704_RS21935 cf6cced5de0405802607ad00393ff471 112 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 18 109 6.2E-29 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD CO704_RS21935 cf6cced5de0405802607ad00393ff471 112 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 28 107 3.5E-27 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD CO704_RS24190 ed84218ae6d979e27d4865e7d6912539 77 SUPERFAMILY SSF56796 1 76 1.27E-13 T 28-03-2018 CO704_RS24190 ed84218ae6d979e27d4865e7d6912539 77 Gene3D G3DSA:1.20.1090.10 1 77 5.6E-14 T 28-03-2018 CO704_RS24190 ed84218ae6d979e27d4865e7d6912539 77 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 68 6.3E-10 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CO704_RS02760 935ad0cdbf1f1f1b308918d955b7e5fb 238 Pfam PF11101 Protein of unknown function (DUF2884) 23 234 2.2E-37 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 CO704_RS22895 8b49a6fb24c7ca6d2f50f1acbed513f9 251 Pfam PF00899 ThiF family 9 238 8.9E-64 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS22895 8b49a6fb24c7ca6d2f50f1acbed513f9 251 Gene3D G3DSA:3.40.50.720 1 245 1.9E-70 T 28-03-2018 CO704_RS22895 8b49a6fb24c7ca6d2f50f1acbed513f9 251 SUPERFAMILY SSF69572 2 245 7.32E-81 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 Pfam PF12840 Helix-turn-helix domain 12 71 7.6E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 9.5E-5 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 9.5E-5 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 9.5E-5 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 SUPERFAMILY SSF46785 6 93 6.57E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 SMART SM00418 12 91 2.2E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CO704_RS11920 52d4cb720b3594a660e716e4dbcc3733 226 Gene3D G3DSA:1.10.10.10 2 220 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15420 bb62e06d9c76724972602b3c857e1822 546 Pfam PF02470 MlaD protein 285 389 1.4E-14 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS15420 bb62e06d9c76724972602b3c857e1822 546 Pfam PF02470 MlaD protein 157 217 1.1E-7 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS15420 bb62e06d9c76724972602b3c857e1822 546 Pfam PF02470 MlaD protein 42 133 2.8E-9 T 28-03-2018 IPR003399 Mce/MlaD CO704_RS15420 bb62e06d9c76724972602b3c857e1822 546 Gene3D G3DSA:1.20.120.570 406 533 1.3E-4 T 28-03-2018 CO704_RS16770 ee45208f009bef225d38fc0432a0a5a7 142 Pfam PF00892 EamA-like transporter family 4 140 8.1E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS16770 ee45208f009bef225d38fc0432a0a5a7 142 SUPERFAMILY SSF103481 39 141 8.63E-15 T 28-03-2018 CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 SUPERFAMILY SSF52402 1 215 3.97E-65 T 28-03-2018 CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 2.0E-81 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 Gene3D G3DSA:3.40.50.620 1 231 1.2E-53 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 1.1E-82 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 47.056 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS25705 4a6093d40890a291cc89de2aaed5e6af 231 PIRSF PIRSF006293 1 225 4.4E-82 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 Gene3D G3DSA:1.10.10.10 124 232 3.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 SUPERFAMILY SSF46894 128 230 1.3E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 SMART SM00448 4 114 2.2E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 229 5.2E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 SUPERFAMILY SSF52172 2 124 3.27E-39 T 28-03-2018 IPR011006 CheY-like superfamily CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 Gene3D G3DSA:3.40.50.2300 1 123 6.4E-36 T 28-03-2018 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 SMART SM00862 153 229 1.9E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS15150 dcc8855d973d32fb0549b5d887b3ef3f 232 Pfam PF00072 Response regulator receiver domain 6 114 9.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CO704_RS07020 e65a555217cdf05bb67ff630a50d00d2 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 2.6E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS07020 e65a555217cdf05bb67ff630a50d00d2 336 Gene3D G3DSA:1.10.3470.10 34 331 9.2E-33 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS21980 ee6e3026dad28bb866bb23588a2ac9a4 217 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 59 161 4.9E-40 T 28-03-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 CO704_RS09565 ca4303e5a82f6ef5407fdcb172d91fc0 217 Gene3D G3DSA:3.10.350.10 163 215 4.0E-5 T 28-03-2018 CO704_RS10740 3973236a04d74186ac726ceb57a8f967 403 Gene3D G3DSA:1.20.1250.20 5 202 9.4E-25 T 28-03-2018 CO704_RS10740 3973236a04d74186ac726ceb57a8f967 403 SUPERFAMILY SSF103473 14 392 9.42E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10740 3973236a04d74186ac726ceb57a8f967 403 Pfam PF07690 Major Facilitator Superfamily 18 352 3.3E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS10740 3973236a04d74186ac726ceb57a8f967 403 Gene3D G3DSA:1.20.1250.20 203 403 3.8E-15 T 28-03-2018 CO704_RS05955 4453897ac71159d09ec889242ba85c88 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 9.2E-18 T 28-03-2018 IPR019638 Protein of unknown function DUF2502 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 229 28.182 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 PRINTS PR01008 Flagellar L-ring protein signature 192 206 1.0E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 PRINTS PR01008 Flagellar L-ring protein signature 145 160 1.0E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 PRINTS PR01008 Flagellar L-ring protein signature 208 222 1.0E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 PRINTS PR01008 Flagellar L-ring protein signature 171 187 1.0E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 PRINTS PR01008 Flagellar L-ring protein signature 72 84 1.0E-35 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS14635 96f654e25de8f23af70723494d68e79c 231 Pfam PF02107 Flagellar L-ring protein 47 230 1.1E-60 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS16910 e6b39fc0547c9df1debe5eeb39941c16 557 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 383 516 4.1E-22 T 28-03-2018 IPR006517 Archaeophage PsiM2, terminase large subunit CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 218 25.348 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 PRINTS PR01008 Flagellar L-ring protein signature 181 195 1.9E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 PRINTS PR01008 Flagellar L-ring protein signature 66 78 1.9E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 PRINTS PR01008 Flagellar L-ring protein signature 197 211 1.9E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 PRINTS PR01008 Flagellar L-ring protein signature 160 176 1.9E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 PRINTS PR01008 Flagellar L-ring protein signature 134 149 1.9E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS17455 6e98c0d2c25b192f20f25a41b8985415 221 Pfam PF02107 Flagellar L-ring protein 46 218 1.1E-57 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CO704_RS10860 0d7a1be62a48a5227efdc110855b75fa 156 Gene3D G3DSA:3.30.530.20 2 156 2.6E-22 T 28-03-2018 IPR023393 START-like domain CO704_RS10860 0d7a1be62a48a5227efdc110855b75fa 156 SUPERFAMILY SSF55961 5 154 9.99E-42 T 28-03-2018 CO704_RS10860 0d7a1be62a48a5227efdc110855b75fa 156 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 151 1.5E-27 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 CO704_RS08995 d250e0d871790d2892d34c903d13b446 114 Pfam PF10709 Protein of unknown function (DUF2511) 25 112 3.0E-43 T 28-03-2018 IPR019648 Protein of unknown function DUF2511 CO704_RS24270 e2237259ea1cfef3e8d416842971dbba 254 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24270 e2237259ea1cfef3e8d416842971dbba 254 SUPERFAMILY SSF56770 36 168 2.49E-50 T 28-03-2018 CO704_RS24270 e2237259ea1cfef3e8d416842971dbba 254 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 1.5E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24270 e2237259ea1cfef3e8d416842971dbba 254 Gene3D G3DSA:3.40.50.700 21 178 5.3E-27 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS20335 6fbd2401e45134eda7896efc936649a4 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 3.8E-21 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS20335 6fbd2401e45134eda7896efc936649a4 168 SUPERFAMILY SSF52141 2 161 1.37E-45 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS20335 6fbd2401e45134eda7896efc936649a4 168 Gene3D G3DSA:3.40.470.10 4 167 1.5E-47 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CO704_RS07350 02a90863c0690d36239beb44cca47c0b 453 Gene3D G3DSA:3.20.20.70 8 171 0.0012 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CO704_RS07350 02a90863c0690d36239beb44cca47c0b 453 Pfam PF01136 Peptidase family U32 75 343 5.2E-97 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS07350 02a90863c0690d36239beb44cca47c0b 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.4E-19 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal CO704_RS07350 02a90863c0690d36239beb44cca47c0b 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CO704_RS00105 ae25643cea51ae6048257dc36a157710 67 Gene3D G3DSA:2.30.30.100 15 65 3.0E-21 T 28-03-2018 CO704_RS00105 ae25643cea51ae6048257dc36a157710 67 SUPERFAMILY SSF50182 15 65 4.14E-16 T 28-03-2018 IPR010920 LSM domain CO704_RS00105 ae25643cea51ae6048257dc36a157710 67 Pfam PF06004 Bacterial protein of unknown function (DUF903) 18 64 2.9E-20 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 2.5E-111 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 SUPERFAMILY SSF52980 8 226 4.93E-80 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 155.982 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 4.7E-33 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 SMART SM00927 59 157 3.4E-64 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CO704_RS03335 816450d7b5db2dca4a3397c20fccf2a6 228 Gene3D G3DSA:3.40.600.10 8 228 4.5E-56 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 33 63 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 SUPERFAMILY SSF88659 101 160 1.52E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 Pfam PF08281 Sigma-70, region 4 107 155 4.3E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 Gene3D G3DSA:1.10.10.10 74 159 2.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 Gene3D G3DSA:1.10.1740.10 2 73 3.8E-15 T 28-03-2018 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 Pfam PF04542 Sigma-70 region 2 11 76 1.1E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 1.1E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS00395 6a8f5938fab47e43c15a25dba38482a9 164 SUPERFAMILY SSF88946 4 96 1.22E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CO704_RS25525 18de274293a4ca4a0ccb10ba562db7fe 101 SUPERFAMILY SSF46894 12 91 8.16E-6 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS24220 c461e919aa31bde5f817c72613d0ab90 373 PIRSF PIRSF005622 1 372 3.1E-157 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CO704_RS24220 c461e919aa31bde5f817c72613d0ab90 373 Pfam PF01924 Hydrogenase formation hypA family 29 367 6.5E-152 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CO704_RS24220 c461e919aa31bde5f817c72613d0ab90 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 1.6E-167 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CO704_RS22150 442a9beab0068c97b3b4f208f0d73b7a 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.1E-51 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CO704_RS22150 442a9beab0068c97b3b4f208f0d73b7a 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 4.8E-55 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CO704_RS22150 442a9beab0068c97b3b4f208f0d73b7a 165 PIRSF PIRSF028301 1 165 3.5E-54 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CO704_RS07635 588a9115683026bd10ced10d017a0d79 404 Pfam PF00534 Glycosyl transferases group 1 211 378 2.1E-12 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS07635 588a9115683026bd10ced10d017a0d79 404 SUPERFAMILY SSF53756 2 397 1.69E-35 T 28-03-2018 CO704_RS07635 588a9115683026bd10ced10d017a0d79 404 Gene3D G3DSA:3.40.50.2000 19 210 9.6E-10 T 28-03-2018 CO704_RS07635 588a9115683026bd10ced10d017a0d79 404 Gene3D G3DSA:3.40.50.2000 211 384 4.9E-21 T 28-03-2018 CO704_RS04450 d7003d7d0cf8716e6fe534f7afdfd149 114 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 9.6E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS04450 d7003d7d0cf8716e6fe534f7afdfd149 114 Gene3D G3DSA:3.30.160.100 2 92 1.0E-26 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS04450 d7003d7d0cf8716e6fe534f7afdfd149 114 SUPERFAMILY SSF69754 3 106 4.45E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS04450 d7003d7d0cf8716e6fe534f7afdfd149 114 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.9E-34 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CO704_RS20360 40da884ef02814ca14507eda894e9923 99 SUPERFAMILY SSF140670 4 99 4.32E-50 T 28-03-2018 CO704_RS20360 40da884ef02814ca14507eda894e9923 99 Pfam PF08986 Domain of unknown function (DUF1889) 1 99 3.3E-44 T 28-03-2018 IPR015079 Protein of unknown function DUF1889 CO704_RS05845 d270b6cdc5a8f9f77f9d7c3baf4f8e7a 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.85 T 28-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CO704_RS05845 d270b6cdc5a8f9f77f9d7c3baf4f8e7a 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 1.1E-41 T 28-03-2018 CO704_RS14715 7bbfbf246b76bab5580e93d65b85b455 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 5.2E-51 T 28-03-2018 IPR010835 Protein of unknown function DUF1439 CO704_RS08025 18553b19b308e475194daf949c39f139 109 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 2.1E-16 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CO704_RS08025 18553b19b308e475194daf949c39f139 109 SUPERFAMILY SSF110857 2 108 2.22E-22 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CO704_RS08025 18553b19b308e475194daf949c39f139 109 Gene3D G3DSA:3.10.490.10 1 109 8.4E-21 T 28-03-2018 CO704_RS22650 a6b2559124f08aec5c17d0299b13d9e6 444 Pfam PF01554 MatE 241 394 1.6E-12 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS22650 a6b2559124f08aec5c17d0299b13d9e6 444 Pfam PF01554 MatE 17 177 5.5E-34 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS22650 a6b2559124f08aec5c17d0299b13d9e6 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 1.4E-94 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CO704_RS18840 df34b0deae6c589443dec6867c205893 158 SUPERFAMILY SSF51182 25 121 7.4E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS18840 df34b0deae6c589443dec6867c205893 158 Gene3D G3DSA:2.60.120.10 6 136 2.0E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS18840 df34b0deae6c589443dec6867c205893 158 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 132 1.7E-45 T 28-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family CO704_RS12605 87042503fbbe191d95f79700367d6dff 90 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 23 78 2.0E-21 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 CO704_RS12605 87042503fbbe191d95f79700367d6dff 90 Pfam PF06649 Protein of unknown function (DUF1161) 25 78 1.8E-25 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 CO704_RS00625 a30768531e698b790eeb5af9f71249a4 177 Gene3D G3DSA:3.40.50.300 7 177 6.0E-26 T 28-03-2018 CO704_RS00625 a30768531e698b790eeb5af9f71249a4 177 Pfam PF01202 Shikimate kinase 17 160 2.6E-10 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CO704_RS00625 a30768531e698b790eeb5af9f71249a4 177 SUPERFAMILY SSF52540 4 172 3.97E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS00625 a30768531e698b790eeb5af9f71249a4 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 171 1.0E-69 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CO704_RS12620 8424558bb05b841d3cbb99313c9b9672 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 236 7.0E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12620 8424558bb05b841d3cbb99313c9b9672 238 SUPERFAMILY SSF161098 41 223 1.7E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12620 8424558bb05b841d3cbb99313c9b9672 238 Gene3D G3DSA:1.10.3720.10 38 235 3.8E-26 T 28-03-2018 CO704_RS15630 d931ecfeead3663398551ca90fae3a12 286 Gene3D G3DSA:1.20.1630.10 2 284 2.4E-46 T 28-03-2018 CO704_RS15630 d931ecfeead3663398551ca90fae3a12 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 4.8E-102 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CO704_RS04915 1875eabbcc3200032daa9169a4300183 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 5.8E-71 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CO704_RS04915 1875eabbcc3200032daa9169a4300183 128 Gene3D G3DSA:3.90.1010.10 1 128 2.3E-53 T 28-03-2018 CO704_RS04915 1875eabbcc3200032daa9169a4300183 128 SUPERFAMILY SSF82649 1 125 1.31E-49 T 28-03-2018 CO704_RS04915 1875eabbcc3200032daa9169a4300183 128 Pfam PF01592 NifU-like N terminal domain 2 126 7.9E-57 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CO704_RS05130 0383fac44569422bbfab94a0bb8375ec 333 Pfam PF00487 Fatty acid desaturase 56 289 7.8E-28 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CO704_RS03030 f17d175c42d2f8f7ac135e9f679f5a8c 85 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 7 82 1.7E-14 T 28-03-2018 IPR014299 Pentapeptide MXKDX repeat protein CO704_RS02950 1c0cd6f31f1b894e7d55cafe0a6601ee 211 Pfam PF01810 LysE type translocator 14 201 4.7E-54 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS02950 1c0cd6f31f1b894e7d55cafe0a6601ee 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 7.0E-71 T 28-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CO704_RS02950 1c0cd6f31f1b894e7d55cafe0a6601ee 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.508 T 28-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 CO704_RS00630 04510b69675bd9d4386c1f2dc4ed4e6a 446 Pfam PF02447 GntP family permease 5 441 7.0E-166 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS00630 04510b69675bd9d4386c1f2dc4ed4e6a 446 PIRSF PIRSF002746 1 446 3.3E-155 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS00630 04510b69675bd9d4386c1f2dc4ed4e6a 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 1.4E-173 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS17005 d3dc33431c582b3037f71a5d1fde3d1c 363 Pfam PF04865 Baseplate J-like protein 66 311 4.6E-60 T 28-03-2018 IPR006949 Baseplate protein J-like CO704_RS12430 d3dc33431c582b3037f71a5d1fde3d1c 363 Pfam PF04865 Baseplate J-like protein 66 311 4.6E-60 T 28-03-2018 IPR006949 Baseplate protein J-like CO704_RS10155 d3dc33431c582b3037f71a5d1fde3d1c 363 Pfam PF04865 Baseplate J-like protein 66 311 4.6E-60 T 28-03-2018 IPR006949 Baseplate protein J-like CO704_RS08810 f0411bd561048b97f0a8f7506390792c 92 SUPERFAMILY SSF159871 3 92 6.93E-13 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS08810 f0411bd561048b97f0a8f7506390792c 92 Gene3D G3DSA:3.30.1660.10 27 92 9.0E-11 T 28-03-2018 IPR025543 Dodecin-like CO704_RS08810 f0411bd561048b97f0a8f7506390792c 92 Pfam PF07338 Protein of unknown function (DUF1471) 38 92 9.8E-11 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CO704_RS17940 e709cf52b7fbe27c65c996f98f0f8316 317 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 290 1.1E-99 T 28-03-2018 IPR013398 CRISPR-associated protein Csy2 CO704_RS17940 e709cf52b7fbe27c65c996f98f0f8316 317 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 290 9.4E-104 T 28-03-2018 IPR013398 CRISPR-associated protein Csy2 CO704_RS06835 755c468f4ad27009032aef5935c57e8f 365 Gene3D G3DSA:1.10.3720.10 2 349 7.1E-34 T 28-03-2018 CO704_RS06835 755c468f4ad27009032aef5935c57e8f 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 5.6E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS06835 755c468f4ad27009032aef5935c57e8f 365 SUPERFAMILY SSF161098 131 343 1.7E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS12195 190eca4ecf8cc340f511b198962b2224 298 Pfam PF13503 Domain of unknown function (DUF4123) 28 162 1.5E-9 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 CO704_RS03070 c4ef8f0bd3851c8eede0b7d3b2e6ea6d 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 4.5E-73 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CO704_RS03070 c4ef8f0bd3851c8eede0b7d3b2e6ea6d 217 Pfam PF03006 Haemolysin-III related 12 209 1.9E-38 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CO704_RS16210 860fa51614ab6ff40f33ef0c67fcdfb7 1756 Pfam PF11725 Pathogenicity factor 1476 1754 2.8E-35 T 28-03-2018 IPR021085 Pathogenicity factor CO704_RS16210 860fa51614ab6ff40f33ef0c67fcdfb7 1756 Pfam PF11725 Pathogenicity factor 95 1451 3.9E-165 T 28-03-2018 IPR021085 Pathogenicity factor CO704_RS23900 aa62877f029060a78df75096dcb656ef 560 Pfam PF05170 AsmA family 2 545 1.7E-26 T 28-03-2018 IPR007844 AsmA CO704_RS07985 3be29314ed3e331e9bd1ce47e232d279 310 Pfam PF09084 NMT1/THI5 like 33 243 1.4E-69 T 28-03-2018 IPR015168 SsuA/THI5-like CO704_RS07985 3be29314ed3e331e9bd1ce47e232d279 310 SUPERFAMILY SSF53850 25 305 2.38E-51 T 28-03-2018 CO704_RS07985 3be29314ed3e331e9bd1ce47e232d279 310 Gene3D G3DSA:3.40.190.10 20 150 1.3E-21 T 28-03-2018 CO704_RS07985 3be29314ed3e331e9bd1ce47e232d279 310 Gene3D G3DSA:3.40.190.10 151 308 3.0E-20 T 28-03-2018 CO704_RS12500 e68d0df011a978d3a5aa5ed74a52d924 145 Pfam PF05360 yiaA/B two helix domain 12 64 5.0E-21 T 28-03-2018 IPR008024 YiaAB two helix CO704_RS12500 e68d0df011a978d3a5aa5ed74a52d924 145 Pfam PF05360 yiaA/B two helix domain 76 127 3.6E-18 T 28-03-2018 IPR008024 YiaAB two helix CO704_RS24365 7d03683e4c0b645bbfb63f08fa553d1e 331 Pfam PF01757 Acyltransferase family 6 318 2.1E-34 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS24365 7d03683e4c0b645bbfb63f08fa553d1e 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 37.843 T 28-03-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 CO704_RS12865 5197c1e45ae2c0d9c5cabc74bcaec0cf 195 Gene3D G3DSA:1.10.10.10 120 189 6.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS12865 5197c1e45ae2c0d9c5cabc74bcaec0cf 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 131 182 3.7E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12865 5197c1e45ae2c0d9c5cabc74bcaec0cf 195 SMART SM00421 129 186 0.0019 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS12865 5197c1e45ae2c0d9c5cabc74bcaec0cf 195 SUPERFAMILY SSF46894 121 186 2.24E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS24320 f64f09cf442485e8a6f210e0f76af659 278 Gene3D G3DSA:1.10.530.10 39 276 3.5E-20 T 28-03-2018 CO704_RS24320 f64f09cf442485e8a6f210e0f76af659 278 SMART SM00047 132 261 3.0E-22 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CO704_RS24320 f64f09cf442485e8a6f210e0f76af659 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 146 271 1.8E-14 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CO704_RS02300 4832c3853fc09b0ea2b141dee4c7b9c6 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.915 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CO704_RS02300 4832c3853fc09b0ea2b141dee4c7b9c6 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 3.9E-42 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CO704_RS15025 0142c8e4119c774ba55a3e2fd7d6f1bb 198 SUPERFAMILY SSF52218 1 197 3.67E-63 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS15025 0142c8e4119c774ba55a3e2fd7d6f1bb 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 2.3E-103 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CO704_RS15025 0142c8e4119c774ba55a3e2fd7d6f1bb 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.246 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CO704_RS15025 0142c8e4119c774ba55a3e2fd7d6f1bb 198 Pfam PF03358 NADPH-dependent FMN reductase 13 143 1.1E-13 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CO704_RS15025 0142c8e4119c774ba55a3e2fd7d6f1bb 198 Gene3D G3DSA:3.40.50.360 2 198 5.7E-52 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS20495 b025a8c53c228d5f027a60b78dc17e23 281 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 19 276 8.0E-76 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS20495 b025a8c53c228d5f027a60b78dc17e23 281 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 281 152.233 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS20495 b025a8c53c228d5f027a60b78dc17e23 281 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 17 278 1.3E-93 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 2.5E-22 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.2E-77 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 Gene3D G3DSA:3.40.50.720 1 168 1.2E-21 T 28-03-2018 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 Gene3D G3DSA:1.10.1040.10 169 300 3.9E-43 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 SUPERFAMILY SSF48179 169 290 5.44E-38 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 SUPERFAMILY SSF51735 1 168 2.9E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS18260 e1ba7715bb42cf8d32bd68a2b8f5d8c7 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 169 290 5.4E-38 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 SUPERFAMILY SSF53850 29 539 1.54E-106 T 28-03-2018 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 Gene3D G3DSA:3.40.190.10 155 299 2.1E-22 T 28-03-2018 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 Gene3D G3DSA:3.10.105.10 300 508 5.8E-42 T 28-03-2018 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 427 1.5E-69 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 PIRSF PIRSF002741 6 541 8.4E-71 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 TIGRFAM TIGR04028 SBP_KPN_01854: ABC transporter substrate binding protein, KPN_01854 family 34 539 2.8E-259 T 28-03-2018 IPR023920 ABC transporter, substrate-binding protein, KPN01854 CO704_RS11735 9dfff6bcf53d67e24468f541b65009e9 541 Gene3D G3DSA:3.90.76.10 55 154 7.6E-26 T 28-03-2018 CO704_RS15370 9da3ece4482612894394a91aa080e43f 169 Pfam PF03846 Cell division inhibitor SulA 7 120 4.7E-51 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CO704_RS15370 9da3ece4482612894394a91aa080e43f 169 SUPERFAMILY SSF52540 31 147 6.37E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15370 9da3ece4482612894394a91aa080e43f 169 PIRSF PIRSF003093 1 169 2.1E-72 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CO704_RS15370 9da3ece4482612894394a91aa080e43f 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 40.119 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CO704_RS15370 9da3ece4482612894394a91aa080e43f 169 Gene3D G3DSA:3.40.50.300 31 148 6.5E-18 T 28-03-2018 CO704_RS13900 aad7b0b639b106e2731c468ff96748c8 287 SMART SM00465 34 112 5.9E-15 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS13900 aad7b0b639b106e2731c468ff96748c8 287 SUPERFAMILY SSF82771 34 111 5.36E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS13900 aad7b0b639b106e2731c468ff96748c8 287 Gene3D G3DSA:3.40.1440.10 20 115 1.0E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CO704_RS12010 0d093a552d24335ac332743f1b4f5f89 207 Pfam PF01810 LysE type translocator 17 203 5.5E-31 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 SUPERFAMILY SSF55486 1 494 8.43E-121 T 28-03-2018 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 Gene3D G3DSA:1.10.1370.10 53 492 8.2E-28 T 28-03-2018 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 445 463 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 147 167 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 6.9E-41 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 PIRSF PIRSF006615 1 494 3.1E-192 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS12665 97cbcfaa81fa76f6aa71c93ef552fe03 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 493 1.2E-94 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CO704_RS08460 c4fbf9c48db86994c50bc129094fe590 404 Pfam PF04143 Sulphur transport 237 393 2.1E-23 T 28-03-2018 IPR007272 Sulphur transport domain CO704_RS08460 c4fbf9c48db86994c50bc129094fe590 404 Pfam PF04143 Sulphur transport 5 160 9.8E-25 T 28-03-2018 IPR007272 Sulphur transport domain CO704_RS25770 b935dadb9f00f71ee0958f4a159a3443 165 SUPERFAMILY SSF47413 15 81 1.31E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25770 b935dadb9f00f71ee0958f4a159a3443 165 SMART SM00530 20 75 1.1E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25770 b935dadb9f00f71ee0958f4a159a3443 165 Pfam PF01381 Helix-turn-helix 26 75 3.2E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25770 b935dadb9f00f71ee0958f4a159a3443 165 Gene3D G3DSA:1.10.260.40 16 161 4.5E-14 T 28-03-2018 CO704_RS22050 7cac42021b78a8f7b3c5bd253e6e1702 367 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 325 3.3E-69 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS22050 7cac42021b78a8f7b3c5bd253e6e1702 367 Pfam PF06996 Type VI secretion, TssG 26 325 7.9E-77 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 PRINTS PR01003 Flagellar assembly protein FliH signature 198 214 1.3E-7 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 PRINTS PR01003 Flagellar assembly protein FliH signature 69 91 1.3E-7 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 PRINTS PR01003 Flagellar assembly protein FliH signature 131 148 1.3E-7 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 PRINTS PR01003 Flagellar assembly protein FliH signature 92 110 1.3E-7 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 Pfam PF09811 Essential protein Yae1, N terminal 59 96 2.6E-9 T 28-03-2018 IPR019191 Essential protein Yae1, N-terminal CO704_RS17525 b3695f429e927a84dec26c71c227c40b 248 Pfam PF02108 Flagellar assembly protein FliH 111 233 5.1E-26 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CO704_RS04230 2b368dd0b1cf173ca0941ebf2b817e31 181 Pfam PF12183 Restriction endonuclease NotI 12 130 6.0E-29 T 28-03-2018 IPR022009 Restriction endonuclease, type II, NotI CO704_RS05020 bc51bef9ae8b4633ea239784adc743c1 482 SUPERFAMILY SSF75304 4 474 8.11E-136 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS05020 bc51bef9ae8b4633ea239784adc743c1 482 Gene3D G3DSA:3.90.1300.10 1 480 1.2E-138 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS05020 bc51bef9ae8b4633ea239784adc743c1 482 Pfam PF01425 Amidase 26 457 1.5E-112 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CO704_RS16515 9726506dd9e1162e13db5506b9727caf 230 SUPERFAMILY SSF161098 5 220 2.35E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS16515 9726506dd9e1162e13db5506b9727caf 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 1.4E-73 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CO704_RS16515 9726506dd9e1162e13db5506b9727caf 230 Gene3D G3DSA:1.10.3720.10 4 228 7.2E-39 T 28-03-2018 CO704_RS16515 9726506dd9e1162e13db5506b9727caf 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 5.7E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS25600 6e665ee3d0eaa22f25195ccd482a54c6 331 PIRSF PIRSF037112 30 325 2.7E-110 T 28-03-2018 IPR017113 Antirestriction, ArdC CO704_RS25600 6e665ee3d0eaa22f25195ccd482a54c6 331 Pfam PF08401 Domain of unknown function (DUF1738) 43 157 9.2E-35 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CO704_RS16920 597d58cd3c35d275e6fc1232be49a661 420 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 105 185 5.0E-17 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS16920 597d58cd3c35d275e6fc1232be49a661 420 Pfam PF04233 Phage Mu protein F like protein 57 184 4.5E-29 T 28-03-2018 IPR006528 Phage head morphogenesis domain CO704_RS19945 c289465afa35201217383cd559016427 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.63 T 28-03-2018 IPR005583 Peroxide stress protein YaaA CO704_RS19945 c289465afa35201217383cd559016427 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.4E-92 T 28-03-2018 IPR005583 Peroxide stress protein YaaA CO704_RS15105 e0b611fef5a0a346ca1fa2d798db6b51 314 SUPERFAMILY SSF53613 1 307 2.42E-61 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS15105 e0b611fef5a0a346ca1fa2d798db6b51 314 Pfam PF00294 pfkB family carbohydrate kinase 7 294 1.2E-44 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CO704_RS15105 e0b611fef5a0a346ca1fa2d798db6b51 314 Gene3D G3DSA:3.40.1190.20 4 312 5.0E-57 T 28-03-2018 IPR029056 Ribokinase-like CO704_RS15895 808353c4e75d69956fe6e04e8bb0f0ee 240 PIRSF PIRSF005426 1 240 6.0E-83 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CO704_RS15895 808353c4e75d69956fe6e04e8bb0f0ee 240 Pfam PF00881 Nitroreductase family 9 159 8.0E-18 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CO704_RS15895 808353c4e75d69956fe6e04e8bb0f0ee 240 SUPERFAMILY SSF55469 1 239 1.57E-72 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS15895 808353c4e75d69956fe6e04e8bb0f0ee 240 Gene3D G3DSA:3.40.109.10 1 240 6.2E-57 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 Pfam PF13412 Winged helix-turn-helix DNA-binding 271 313 2.4E-8 T 28-03-2018 CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 Pfam PF02661 Fic/DOC family 101 196 5.1E-21 T 28-03-2018 IPR003812 Fido domain CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 Gene3D G3DSA:1.10.10.10 265 328 2.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 Gene3D G3DSA:1.10.3290.10 12 260 1.4E-50 T 28-03-2018 IPR003812 Fido domain CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 SUPERFAMILY SSF140931 79 248 1.01E-39 T 28-03-2018 IPR003812 Fido domain CO704_RS06040 bb6c19221c65f29fe6e85855e242c95e 328 SUPERFAMILY SSF46785 266 325 1.11E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS14570 4348906500a495b2fd661ca363c0c248 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.135 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS14570 4348906500a495b2fd661ca363c0c248 56 Pfam PF01783 Ribosomal L32p protein family 2 54 1.5E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS14570 4348906500a495b2fd661ca363c0c248 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 8.9E-20 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CO704_RS14570 4348906500a495b2fd661ca363c0c248 56 SUPERFAMILY SSF57829 2 54 4.09E-18 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CO704_RS05775 e1de632052c7f023328c03d3a7031855 150 Pfam PF11143 Protein of unknown function (DUF2919) 2 141 3.7E-45 T 28-03-2018 IPR021318 Protein of unknown function DUF2919 CO704_RS09110 9af2011c6524e994f0971d8befe03ef6 190 Pfam PF02659 Putative manganese efflux pump 31 182 3.7E-52 T 28-03-2018 IPR003810 Putative manganese efflux pump CO704_RS09110 9af2011c6524e994f0971d8befe03ef6 190 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 25.591 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 PIRSF PIRSF002756 1 338 8.9E-105 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 Pfam PF12849 PBP superfamily domain 20 307 7.8E-64 T 28-03-2018 IPR024370 PBP domain CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.3E-128 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 Gene3D G3DSA:3.40.190.10 161 337 2.2E-25 T 28-03-2018 CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 Gene3D G3DSA:3.40.190.10 26 160 1.4E-31 T 28-03-2018 CO704_RS24155 e251c2f6bbcc7166678afc590675fe8e 346 SUPERFAMILY SSF53850 28 338 1.35E-96 T 28-03-2018 CO704_RS04085 2934399d9267631c3242ea257587aff8 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 2.2E-25 T 28-03-2018 CO704_RS04085 2934399d9267631c3242ea257587aff8 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 24.841 T 28-03-2018 IPR022835 Chaperone modulatory protein CbpM CO704_RS04085 2934399d9267631c3242ea257587aff8 101 Gene3D G3DSA:1.10.1660.10 1 101 4.6E-8 T 28-03-2018 CO704_RS24620 1b68b56dcea4451c7dde4621b8cf264f 688 Pfam PF05170 AsmA family 1 583 4.0E-161 T 28-03-2018 IPR007844 AsmA CO704_RS11360 f8e6c005365fb470623e9306d4fc785d 330 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 280 5.0E-113 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CO704_RS11360 f8e6c005365fb470623e9306d4fc785d 330 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 37.058 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CO704_RS11360 f8e6c005365fb470623e9306d4fc785d 330 Pfam PF03812 2-keto-3-deoxygluconate permease 3 311 2.4E-113 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CO704_RS11360 f8e6c005365fb470623e9306d4fc785d 330 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 6.4E-159 T 28-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 CO704_RS05380 36767c865cb0d30f2560983170d1e02e 178 Pfam PF07445 Primosomal replication protein priC 8 174 4.2E-50 T 28-03-2018 IPR010890 Primosomal replication PriB/PriC CO704_RS21305 fc8004811f7b4ce92197d8857ccc1c68 209 Pfam PF01810 LysE type translocator 16 202 4.4E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS21305 fc8004811f7b4ce92197d8857ccc1c68 209 PIRSF PIRSF006324 1 205 6.4E-47 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS07240 634033adf478d4ff526b1e1b4ebf1b74 407 Pfam PF07690 Major Facilitator Superfamily 31 243 9.0E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS07240 634033adf478d4ff526b1e1b4ebf1b74 407 Gene3D G3DSA:1.20.1250.20 17 206 7.4E-28 T 28-03-2018 CO704_RS07240 634033adf478d4ff526b1e1b4ebf1b74 407 SUPERFAMILY SSF103473 15 401 1.44E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS07240 634033adf478d4ff526b1e1b4ebf1b74 407 Gene3D G3DSA:1.20.1250.20 207 403 3.9E-21 T 28-03-2018 CO704_RS25970 cc257e118f811973237e366100e9a0e5 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 97 3.5E-10 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS25970 cc257e118f811973237e366100e9a0e5 248 SMART SM00862 23 100 7.7E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CO704_RS25970 cc257e118f811973237e366100e9a0e5 248 SUPERFAMILY SSF46894 22 98 2.35E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS25970 cc257e118f811973237e366100e9a0e5 248 Gene3D G3DSA:1.10.10.10 6 106 4.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS09615 a66e0bc52f87c8b8372f1ebbf52d0ae3 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 3.6E-48 T 28-03-2018 IPR019698 Protein of unknown function DUF2583 CO704_RS02380 0556ced34179b84cae3465b06fa24cb5 246 ProDom PD117946 FIMBRIAE Y REGULATORY FIMBRIA 30 238 2.0E-18 T 28-03-2018 CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 SMART SM00382 158 340 5.7E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 SUPERFAMILY SSF52540 93 362 1.77E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 Gene3D G3DSA:3.40.50.300 70 356 2.7E-78 T 28-03-2018 CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 356 1.8E-66 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS17520 a96e0a16847ee1fda4cea566ae2da310 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 432 3.6E-160 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CO704_RS25210 0fd1999bdff4a88b09df615c7e598f3e 65 Gene3D G3DSA:1.10.260.40 3 61 1.5E-11 T 28-03-2018 CO704_RS25210 0fd1999bdff4a88b09df615c7e598f3e 65 SMART SM00530 3 57 1.5E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25210 0fd1999bdff4a88b09df615c7e598f3e 65 SUPERFAMILY SSF47413 4 50 2.28E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25210 0fd1999bdff4a88b09df615c7e598f3e 65 Pfam PF01381 Helix-turn-helix 4 47 8.3E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS08795 e923fef1bd44c95bcfce1f32e5f969da 188 Pfam PF06185 YecM protein 10 185 1.6E-70 T 28-03-2018 IPR010393 Protein of unknown function DUF991 CO704_RS08795 e923fef1bd44c95bcfce1f32e5f969da 188 Gene3D G3DSA:3.10.180.10 7 186 1.0E-76 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS08795 e923fef1bd44c95bcfce1f32e5f969da 188 SUPERFAMILY SSF54593 2 185 1.63E-67 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CO704_RS25440 b6de494b3d75541fe36544780cb3f212 346 Pfam PF04393 Protein of unknown function (DUF535) 64 341 4.9E-83 T 28-03-2018 IPR007488 Protein of unknown function DUF535 CO704_RS06965 2f62aff360b9e5375f536b37f9c67874 489 Pfam PF00324 Amino acid permease 21 472 6.7E-145 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS06965 2f62aff360b9e5375f536b37f9c67874 489 PIRSF PIRSF006060 1 487 2.7E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS06965 2f62aff360b9e5375f536b37f9c67874 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS10720 910e1c832e6f15910ebde77ca589cf71 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 340 5.2E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS10720 910e1c832e6f15910ebde77ca589cf71 357 Gene3D G3DSA:1.10.3470.10 45 355 8.7E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS10720 910e1c832e6f15910ebde77ca589cf71 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 2.4E-128 T 28-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CO704_RS02955 0b1c8bc687d99480a33973c141e9da1a 245 Pfam PF04402 Protein of unknown function (DUF541) 32 232 2.5E-44 T 28-03-2018 IPR007497 Protein of unknown function DUF541 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 142 4.0E-32 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 2.1E-56 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 PIRSF PIRSF019404 1 147 9.2E-49 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 Gene3D G3DSA:1.20.1480.30 3 100 0.019 T 28-03-2018 CO704_RS08420 6c7d907d3607cee1769089d9af0853b8 147 Pfam PF02050 Flagellar FliJ protein 19 141 1.1E-33 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CO704_RS20125 b733472ea9f834aa27bafb0211b1b0a8 357 SUPERFAMILY SSF52151 21 269 2.88E-42 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CO704_RS20125 b733472ea9f834aa27bafb0211b1b0a8 357 Gene3D G3DSA:3.40.1090.10 13 247 1.5E-26 T 28-03-2018 CO704_RS20125 b733472ea9f834aa27bafb0211b1b0a8 357 Pfam PF01734 Patatin-like phospholipase 27 195 1.1E-18 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 Gene3D G3DSA:2.170.130.10 29 187 3.3E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 709 1.4E-117 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 SUPERFAMILY SSF56935 54 710 1.91E-128 T 28-03-2018 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 Gene3D G3DSA:2.40.170.20 188 710 1.3E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 Pfam PF00593 TonB dependent receptor 250 708 1.5E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CO704_RS18625 7fb59912eae867b24bc34299695aa375 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 175 1.3E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CO704_RS13880 d865cdec9c296cc15a361be1625dca8c 78 Pfam PF10729 Cell division activator CedA 1 78 1.8E-39 T 28-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 CO704_RS20400 502b642cb9e50c02438cde76cdd9934b 313 Gene3D G3DSA:1.10.3470.10 5 294 3.7E-34 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS20400 502b642cb9e50c02438cde76cdd9934b 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 292 8.1E-35 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS14845 1058c82be4421e365f6539e688ff0fe3 128 Pfam PF10627 Curli assembly protein CsgE 26 127 3.7E-31 T 28-03-2018 IPR018900 Curli assembly protein CsgE CO704_RS04110 09ad7946c3deb3d8f13f06e163c34310 159 Pfam PF02082 Transcriptional regulator 2 82 7.7E-14 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CO704_RS04110 09ad7946c3deb3d8f13f06e163c34310 159 Gene3D G3DSA:1.10.10.10 2 147 5.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04110 09ad7946c3deb3d8f13f06e163c34310 159 SUPERFAMILY SSF46785 1 137 5.03E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 Gene3D G3DSA:1.10.10.10 1 81 1.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 SUPERFAMILY SSF46785 3 103 2.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 Pfam PF03466 LysR substrate binding domain 93 292 2.2E-15 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 SUPERFAMILY SSF53850 93 294 1.49E-18 T 28-03-2018 CO704_RS02400 a1a84276ab25fe55d8cc1ce4e6bf9aa1 311 Gene3D G3DSA:3.40.190.10 82 197 5.6E-13 T 28-03-2018 CO704_RS15410 4f819d8e653b19317340f1225cc61f79 55 Gene3D G3DSA:1.10.10.620 3 53 4.4E-26 T 28-03-2018 CO704_RS15410 4f819d8e653b19317340f1225cc61f79 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-24 T 28-03-2018 IPR007040 Ribosome modulation factor CO704_RS15410 4f819d8e653b19317340f1225cc61f79 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.301 T 28-03-2018 IPR007040 Ribosome modulation factor CO704_RS15410 4f819d8e653b19317340f1225cc61f79 55 Pfam PF04957 Ribosome modulation factor 1 52 1.5E-30 T 28-03-2018 IPR007040 Ribosome modulation factor CO704_RS11685 7db1b3f247714ed5767734c0231dd8bb 464 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 2.9E-166 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CO704_RS11685 7db1b3f247714ed5767734c0231dd8bb 464 PIRSF PIRSF006446 2 459 1.2E-224 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 409 37.568 T 28-03-2018 IPR022969 Chloride channel YfeO CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 PRINTS PR00762 Chloride channel signature 103 122 4.3E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 PRINTS PR00762 Chloride channel signature 153 172 4.3E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 PRINTS PR00762 Chloride channel signature 319 339 4.3E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 Pfam PF00654 Voltage gated chloride channel 94 391 5.5E-21 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 SUPERFAMILY SSF81340 9 397 3.79E-42 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS05970 cc7e284d9ed4a6c2b0ab301b71713c02 410 Gene3D G3DSA:1.10.3080.10 4 398 1.9E-35 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CO704_RS16135 b3333830e41b53b6e91eac42988d2612 316 Pfam PF04877 HrpZ 1 273 4.8E-6 T 28-03-2018 IPR006961 Harpin, HrpN/Z CO704_RS19035 d8fabb6851723ea4d193882f9d25c460 127 SUPERFAMILY SSF54427 1 126 3.06E-42 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS19035 d8fabb6851723ea4d193882f9d25c460 127 Gene3D G3DSA:3.10.450.50 3 127 1.9E-24 T 28-03-2018 CO704_RS19035 d8fabb6851723ea4d193882f9d25c460 127 Pfam PF11533 Protein of unknown function (DUF3225) 5 126 1.3E-60 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 CO704_RS08050 d533a52aedceb7039df01b4694a75fed 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 60 5.8E-17 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CO704_RS08050 d533a52aedceb7039df01b4694a75fed 72 Gene3D G3DSA:1.10.10.10 14 68 1.2E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25715 604e77f45bef6cc8b42c8eadf4d4dbfd 202 Gene3D G3DSA:1.10.260.40 1 171 4.3E-9 T 28-03-2018 CO704_RS25715 604e77f45bef6cc8b42c8eadf4d4dbfd 202 SUPERFAMILY SSF47413 11 68 1.48E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25715 604e77f45bef6cc8b42c8eadf4d4dbfd 202 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 69 1.9E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 Pfam PF01061 ABC-2 type transporter 9 218 4.1E-39 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 PIRSF PIRSF006648 12 253 1.0E-22 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 7.5E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 7.5E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 7.5E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS19465 4b594c82bec310ab22059917a04b6a70 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 7.5E-9 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CO704_RS18795 74b6cf84ab6d0197670e48a11fed9233 170 SUPERFAMILY SSF46894 111 168 1.26E-6 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS12370 fe09e9516d30d07f763a41f565ee731c 146 Pfam PF07030 Protein of unknown function (DUF1320) 3 124 1.8E-31 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 CO704_RS12370 fe09e9516d30d07f763a41f565ee731c 146 Gene3D G3DSA:1.10.3230.10 11 91 0.0014 T 28-03-2018 CO704_RS10095 fe09e9516d30d07f763a41f565ee731c 146 Pfam PF07030 Protein of unknown function (DUF1320) 3 124 1.8E-31 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 CO704_RS10095 fe09e9516d30d07f763a41f565ee731c 146 Gene3D G3DSA:1.10.3230.10 11 91 0.0014 T 28-03-2018 CO704_RS16945 fe09e9516d30d07f763a41f565ee731c 146 Pfam PF07030 Protein of unknown function (DUF1320) 3 124 1.8E-31 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 CO704_RS16945 fe09e9516d30d07f763a41f565ee731c 146 Gene3D G3DSA:1.10.3230.10 11 91 0.0014 T 28-03-2018 CO704_RS02150 e9460a28bec19a4d957965cff67c486d 146 SUPERFAMILY SSF47413 18 85 1.08E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS02150 e9460a28bec19a4d957965cff67c486d 146 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 24 85 1.0E-5 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CO704_RS02150 e9460a28bec19a4d957965cff67c486d 146 Gene3D G3DSA:1.10.260.40 16 120 5.9E-9 T 28-03-2018 CO704_RS20830 e72fbe64346a18f7d1ccdd4f33797641 470 Pfam PF00324 Amino acid permease 27 467 5.3E-123 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS20830 e72fbe64346a18f7d1ccdd4f33797641 470 PIRSF PIRSF006060 1 470 6.6E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS20830 e72fbe64346a18f7d1ccdd4f33797641 470 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS17445 01d0c1c77ef8d7864a0dbdb205347187 129 Pfam PF10135 Rod binding protein 42 93 2.2E-11 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CO704_RS01675 45315a932f22f4382b0d788c57dd2a0c 260 Pfam PF02405 Permease MlaE 44 256 4.9E-72 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CO704_RS01675 45315a932f22f4382b0d788c57dd2a0c 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 1.3E-103 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CO704_RS12580 2f62fb5a8691a4c7eb5236930bc2ba8a 395 Gene3D G3DSA:3.20.20.80 19 380 8.3E-37 T 28-03-2018 CO704_RS12580 2f62fb5a8691a4c7eb5236930bc2ba8a 395 SUPERFAMILY SSF51445 283 367 1.06E-55 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS12580 2f62fb5a8691a4c7eb5236930bc2ba8a 395 SUPERFAMILY SSF51445 23 253 1.06E-55 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CO704_RS12580 2f62fb5a8691a4c7eb5236930bc2ba8a 395 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 39 343 8.9E-26 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CO704_RS15785 d9c1c4fb7f1eb2b0925a5784f08f3f13 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 6.7E-28 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CO704_RS15785 d9c1c4fb7f1eb2b0925a5784f08f3f13 336 SUPERFAMILY SSF51735 1 268 2.44E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15785 d9c1c4fb7f1eb2b0925a5784f08f3f13 336 SUPERFAMILY SSF51735 296 332 2.44E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS15785 d9c1c4fb7f1eb2b0925a5784f08f3f13 336 Gene3D G3DSA:3.40.50.720 1 180 1.2E-28 T 28-03-2018 CO704_RS15785 d9c1c4fb7f1eb2b0925a5784f08f3f13 336 Gene3D G3DSA:3.90.25.10 181 335 2.2E-24 T 28-03-2018 CO704_RS24160 c164f562ffd9fd7e0960ca3cbfc2d31c 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 306 6.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24160 c164f562ffd9fd7e0960ca3cbfc2d31c 320 SUPERFAMILY SSF161098 27 304 1.2E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS24160 c164f562ffd9fd7e0960ca3cbfc2d31c 320 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.2E-93 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CO704_RS24160 c164f562ffd9fd7e0960ca3cbfc2d31c 320 Gene3D G3DSA:1.10.3720.10 10 306 2.1E-32 T 28-03-2018 CO704_RS20745 a6670f1c61e08496fb6dafda209208a5 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 5.0E-23 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CO704_RS20745 a6670f1c61e08496fb6dafda209208a5 114 Gene3D G3DSA:3.10.490.10 1 113 3.2E-28 T 28-03-2018 CO704_RS20745 a6670f1c61e08496fb6dafda209208a5 114 SUPERFAMILY SSF110857 1 111 1.06E-33 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CO704_RS12165 db255a602904d23f9e22f49bde0f5c37 180 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 170 3.4E-37 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS12165 db255a602904d23f9e22f49bde0f5c37 180 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 157 7.4E-24 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CO704_RS20635 5e660b0a87ca266e04a59a914635c71d 166 Pfam PF01863 Protein of unknown function DUF45 96 149 3.4E-10 T 28-03-2018 IPR002725 Protein of unknown function DUF45 CO704_RS21680 4bd56a896eb9d1bd439f76881c129ae3 138 Pfam PF07128 Protein of unknown function (DUF1380) 1 136 2.2E-28 T 28-03-2018 IPR009811 Protein of unknown function DUF1380 CO704_RS04425 e73d83c8986ed3efc8acf2239a1aabec 186 Pfam PF13689 Domain of unknown function (DUF4154) 48 179 2.3E-29 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 CO704_RS02565 5d5c4242d620101598219cf25eba619c 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 1.6E-99 T 28-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 CO704_RS02565 5d5c4242d620101598219cf25eba619c 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 206 8.1E-35 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CO704_RS14195 6c07c3a64b897685ef0c988e0c21ed8a 369 Pfam PF07993 Male sterility protein 6 237 1.9E-35 T 28-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CO704_RS14195 6c07c3a64b897685ef0c988e0c21ed8a 369 SUPERFAMILY SSF51735 318 354 3.34E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14195 6c07c3a64b897685ef0c988e0c21ed8a 369 SUPERFAMILY SSF51735 4 287 3.34E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CO704_RS14195 6c07c3a64b897685ef0c988e0c21ed8a 369 Gene3D G3DSA:3.40.50.720 1 361 1.6E-34 T 28-03-2018 CO704_RS07950 dee28893654ffe752a01b3d12bdc4b37 209 SUPERFAMILY SSF52833 38 200 4.36E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold CO704_RS07950 dee28893654ffe752a01b3d12bdc4b37 209 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CO704_RS07950 dee28893654ffe752a01b3d12bdc4b37 209 Pfam PF01323 DSBA-like thioredoxin domain 59 198 1.2E-21 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CO704_RS07950 dee28893654ffe752a01b3d12bdc4b37 209 Gene3D G3DSA:3.40.30.10 37 209 2.6E-36 T 28-03-2018 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 Gene3D G3DSA:2.30.40.10 3 69 2.3E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 Gene3D G3DSA:3.20.20.140 70 395 9.9E-92 T 28-03-2018 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 SUPERFAMILY SSF51556 55 376 3.89E-90 T 28-03-2018 IPR032466 Metal-dependent hydrolase CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 SUPERFAMILY SSF51338 375 436 2.75E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 SUPERFAMILY SSF51338 2 54 2.75E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CO704_RS15060 130fe1dcdb61c4b437be4e5aef88877b 449 Pfam PF01979 Amidohydrolase family 52 430 1.4E-14 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CO704_RS13350 d0fb16fe8f9560bb9a31aeecf6680159 146 Pfam PF10754 Protein of unknown function (DUF2569) 7 144 4.0E-38 T 28-03-2018 IPR019690 Protein of unknown function DUF2569 CO704_RS01035 ca9fe3a35c326936633b9a023e6c1ec3 242 Gene3D G3DSA:1.10.10.60 187 238 4.4E-6 T 28-03-2018 CO704_RS01035 ca9fe3a35c326936633b9a023e6c1ec3 242 Pfam PF13309 HTH domain 173 230 3.3E-19 T 28-03-2018 CO704_RS01035 ca9fe3a35c326936633b9a023e6c1ec3 242 Pfam PF08348 YheO-like PAS domain 29 137 2.3E-36 T 28-03-2018 IPR013559 YheO-like CO704_RS01035 ca9fe3a35c326936633b9a023e6c1ec3 242 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 152 6.0E-68 T 28-03-2018 IPR013559 YheO-like CO704_RS16235 e4775abfe1cd57e82ef4469d1c469cf9 383 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 196 376 1.1E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS16235 e4775abfe1cd57e82ef4469d1c469cf9 383 Gene3D G3DSA:1.10.3720.10 7 383 8.8E-28 T 28-03-2018 CO704_RS16235 e4775abfe1cd57e82ef4469d1c469cf9 383 SUPERFAMILY SSF161098 174 373 1.57E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS02205 b4d9d5f700af379d659e2a5bd852af5e 128 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 109 2.4E-55 T 28-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CO704_RS20675 199167a7d509de58377adc95b211e8de 220 Pfam PF09335 SNARE associated Golgi protein 48 174 4.5E-22 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS14130 da69b9395561f3893cafad022c25e053 257 SUPERFAMILY SSF161098 18 225 5.89E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14130 da69b9395561f3893cafad022c25e053 257 Gene3D G3DSA:1.10.3720.10 2 237 1.9E-31 T 28-03-2018 CO704_RS14130 da69b9395561f3893cafad022c25e053 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 241 3.4E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS14130 da69b9395561f3893cafad022c25e053 257 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 81 2.1E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CO704_RS08610 d00be851b67d3ff196ba52203a4d79aa 290 Pfam PF12697 Alpha/beta hydrolase family 85 223 8.6E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS08610 d00be851b67d3ff196ba52203a4d79aa 290 SUPERFAMILY SSF53474 81 264 2.32E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS08610 d00be851b67d3ff196ba52203a4d79aa 290 Gene3D G3DSA:3.40.50.1820 84 280 1.9E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS16655 820be954ce059322149543217878376b 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.5E-174 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CO704_RS16655 820be954ce059322149543217878376b 522 PIRSF PIRSF006446 340 522 5.0E-30 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CO704_RS16655 820be954ce059322149543217878376b 522 PIRSF PIRSF006446 1 327 7.5E-115 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CO704_RS22095 7e405218635dc1921fcad1f33bc6f69f 522 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 217 309 7.7E-12 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 CO704_RS07855 6894f35eb6fbbdf155ad6a7bd691a289 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 2.5E-56 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS07855 6894f35eb6fbbdf155ad6a7bd691a289 426 Gene3D G3DSA:3.50.50.60 18 401 4.2E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS07855 6894f35eb6fbbdf155ad6a7bd691a289 426 SUPERFAMILY SSF51905 344 411 7.77E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS07855 6894f35eb6fbbdf155ad6a7bd691a289 426 SUPERFAMILY SSF51905 27 252 7.77E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 Gene3D G3DSA:3.40.50.300 1 193 1.7E-41 T 28-03-2018 CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 SUPERFAMILY SSF52540 2 186 1.04E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 Pfam PF00005 ABC transporter 18 154 1.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 196 8.7E-79 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CO704_RS06185 a5dc18bad518f79e48a9083580571d2a 201 SMART SM00382 26 200 3.1E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CO704_RS16000 353f5d57e2eace9ceb93da24b622ee70 208 Pfam PF01613 Flavin reductase like domain 27 167 2.3E-16 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CO704_RS16000 353f5d57e2eace9ceb93da24b622ee70 208 Gene3D G3DSA:2.30.110.10 2 201 1.4E-43 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS16000 353f5d57e2eace9ceb93da24b622ee70 208 SMART SM00903 25 176 9.9E-10 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CO704_RS16000 353f5d57e2eace9ceb93da24b622ee70 208 SUPERFAMILY SSF50475 4 191 4.37E-48 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 Gene3D G3DSA:1.20.58.180 216 294 2.6E-32 T 28-03-2018 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 6.6E-150 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.594 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.1E-177 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 Gene3D G3DSA:3.30.930.10 1 214 4.3E-87 T 28-03-2018 CO704_RS24375 249b7fdca74877861ea835268f0b52df 303 SUPERFAMILY SSF55681 8 292 1.12E-133 T 28-03-2018 CO704_RS16500 5b9b4d3938d3dc3173ca532eef810ba7 332 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 332 55.795 T 28-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CO704_RS16500 5b9b4d3938d3dc3173ca532eef810ba7 332 SUPERFAMILY SSF50974 68 329 9.55E-51 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CO704_RS16500 5b9b4d3938d3dc3173ca532eef810ba7 332 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 328 1.5E-90 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CO704_RS16500 5b9b4d3938d3dc3173ca532eef810ba7 332 Gene3D G3DSA:2.130.10.10 2 332 1.4E-53 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CO704_RS21970 edf8d8868f4afb653048ab599cb69958 240 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 44 235 6.8E-74 T 28-03-2018 IPR022293 Integrating conjugative element protein, PFL4693 CO704_RS10685 3ab4fe14c047ed2561041d36d699132c 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 1.3E-33 T 28-03-2018 IPR019671 Protein of unknown function DUF2526 CO704_RS06365 ed07e127a8643c37c21e63bd2ddfd6db 230 Pfam PF05036 Sporulation related domain 152 225 2.0E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS06365 ed07e127a8643c37c21e63bd2ddfd6db 230 Gene3D G3DSA:3.30.70.1070 147 228 5.9E-8 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS06365 ed07e127a8643c37c21e63bd2ddfd6db 230 Hamap MF_02022 Cell division protein DedD [dedD]. 10 229 24.309 T 28-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 CO704_RS06365 ed07e127a8643c37c21e63bd2ddfd6db 230 SUPERFAMILY SSF110997 150 228 6.15E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CO704_RS06120 071a5bab5445c07ed08997b2f030e090 64 Gene3D G3DSA:3.40.50.720 16 60 2.3E-13 T 28-03-2018 CO704_RS06120 071a5bab5445c07ed08997b2f030e090 64 SUPERFAMILY SSF51971 15 51 2.47E-12 T 28-03-2018 CO704_RS06120 071a5bab5445c07ed08997b2f030e090 64 Pfam PF01266 FAD dependent oxidoreductase 19 52 4.9E-10 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CO704_RS22175 372bf64a53914089b293df850eb28805 570 Pfam PF02195 ParB-like nuclease domain 37 87 2.2E-4 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS22175 372bf64a53914089b293df850eb28805 570 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 26 290 1.5E-115 T 28-03-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB CO704_RS22175 372bf64a53914089b293df850eb28805 570 Gene3D G3DSA:3.90.1530.10 28 140 1.5E-12 T 28-03-2018 CO704_RS22175 372bf64a53914089b293df850eb28805 570 SUPERFAMILY SSF110849 34 136 8.37E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CO704_RS04460 5bcadce035321400bd3e0bdebf1a488f 245 Gene3D G3DSA:1.25.20.10 30 244 2.5E-15 T 28-03-2018 CO704_RS04460 5bcadce035321400bd3e0bdebf1a488f 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 2.4E-87 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CO704_RS04460 5bcadce035321400bd3e0bdebf1a488f 245 Pfam PF13525 Outer membrane lipoprotein 28 236 2.8E-84 T 28-03-2018 CO704_RS04460 5bcadce035321400bd3e0bdebf1a488f 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.907 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CO704_RS04460 5bcadce035321400bd3e0bdebf1a488f 245 SUPERFAMILY SSF48452 26 119 1.43E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CO704_RS24100 60915f2810142d0b090b34f30cd63d0c 126 Pfam PF03899 ATP synthase I chain 13 108 2.0E-16 T 28-03-2018 IPR005598 ATP synthase protein I CO704_RS08785 a8f0cbb397ef5717706e21f8752a7d08 131 Pfam PF06366 Flagellar protein FlhE 28 129 9.4E-34 T 28-03-2018 IPR009420 Flagellar protein FlhE CO704_RS19900 da2280e783787f83a14538b4c2cc2703 297 SUPERFAMILY SSF53850 91 286 4.03E-24 T 28-03-2018 CO704_RS19900 da2280e783787f83a14538b4c2cc2703 297 SUPERFAMILY SSF46785 2 85 1.03E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19900 da2280e783787f83a14538b4c2cc2703 297 Pfam PF03466 LysR substrate binding domain 97 284 2.5E-8 T 28-03-2018 IPR005119 LysR, substrate-binding CO704_RS19900 da2280e783787f83a14538b4c2cc2703 297 Gene3D G3DSA:1.10.10.10 1 86 1.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19900 da2280e783787f83a14538b4c2cc2703 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 8.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CO704_RS14050 00b9360cfbfb851e557afcd72e6a71cf 137 SUPERFAMILY SSF51316 7 131 1.26E-57 T 28-03-2018 IPR011057 Mss4-like CO704_RS14050 00b9360cfbfb851e557afcd72e6a71cf 137 Gene3D G3DSA:2.170.150.20 4 137 4.1E-57 T 28-03-2018 CO704_RS14050 00b9360cfbfb851e557afcd72e6a71cf 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 129 37.42 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CO704_RS14050 00b9360cfbfb851e557afcd72e6a71cf 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 135 1.3E-62 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CO704_RS14050 00b9360cfbfb851e557afcd72e6a71cf 137 Pfam PF01641 SelR domain 11 127 5.0E-53 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CO704_RS03275 52013f47280b8e76b1c81317baf9cc42 373 SUPERFAMILY SSF160355 64 330 1.12E-70 T 28-03-2018 CO704_RS03275 52013f47280b8e76b1c81317baf9cc42 373 Pfam PF02706 Chain length determinant protein 25 122 2.6E-17 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CO704_RS03275 52013f47280b8e76b1c81317baf9cc42 373 Gene3D G3DSA:3.30.1890.10 53 214 3.1E-36 T 28-03-2018 CO704_RS03275 52013f47280b8e76b1c81317baf9cc42 373 Gene3D G3DSA:1.10.287.210 215 313 1.1E-24 T 28-03-2018 CO704_RS02025 3243162debde498a8bf985743b818d71 463 Gene3D G3DSA:1.20.1250.20 22 228 6.7E-23 T 28-03-2018 CO704_RS02025 3243162debde498a8bf985743b818d71 463 PIRSF PIRSF002808 9 461 1.7E-101 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CO704_RS02025 3243162debde498a8bf985743b818d71 463 SUPERFAMILY SSF103473 18 452 3.01E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS02025 3243162debde498a8bf985743b818d71 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.8E-144 T 28-03-2018 CO704_RS02025 3243162debde498a8bf985743b818d71 463 Gene3D G3DSA:1.20.1250.20 246 462 9.2E-19 T 28-03-2018 CO704_RS02025 3243162debde498a8bf985743b818d71 463 Pfam PF07690 Major Facilitator Superfamily 35 397 1.7E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS10830 6b92c9c0aca721275086e420b462bce9 174 SUPERFAMILY SSF55729 10 174 8.02E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS10830 6b92c9c0aca721275086e420b462bce9 174 Pfam PF13673 Acetyltransferase (GNAT) domain 53 152 7.3E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS10830 6b92c9c0aca721275086e420b462bce9 174 Gene3D G3DSA:3.40.630.30 1 174 4.4E-31 T 28-03-2018 CO704_RS00280 4da38ff2aa77187f1e3860a7c990a156 283 Pfam PF11692 Protein of unknown function (DUF3289) 4 276 3.2E-108 T 28-03-2018 IPR017483 Conserved hypothetical protein CHP03034 CO704_RS00280 4da38ff2aa77187f1e3860a7c990a156 283 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 3 276 9.1E-109 T 28-03-2018 IPR017483 Conserved hypothetical protein CHP03034 CO704_RS25740 908ce0628e4f770feffaa20ed75df0a6 190 Gene3D G3DSA:1.10.10.10 5 95 2.7E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25740 908ce0628e4f770feffaa20ed75df0a6 190 SUPERFAMILY SSF46785 6 87 1.36E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS19950 b3e54e3318cfdade526dc3754504f662 86 Pfam PF10697 Protein of unknown function (DUF2502) 23 83 1.9E-11 T 28-03-2018 IPR019638 Protein of unknown function DUF2502 CO704_RS17375 a8c30f3999fc2c70287273882adc357b 155 Pfam PF03748 Flagellar basal body-associated protein FliL 55 155 8.6E-11 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CO704_RS23230 25be10f995757047d094726cd9e266aa 68 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 1.4E-8 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site CO704_RS16100 a20a2effea94624e268fe90e4f7aa056 155 Gene3D G3DSA:1.10.287.620 19 153 3.1E-4 T 28-03-2018 CO704_RS04870 f7c9b8a8d9c20c8cd489c776ec74d33e 273 SUPERFAMILY SSF74650 2 272 1.07E-42 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CO704_RS04870 f7c9b8a8d9c20c8cd489c776ec74d33e 273 Pfam PF01263 Aldose 1-epimerase 3 269 1.5E-26 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CO704_RS04870 f7c9b8a8d9c20c8cd489c776ec74d33e 273 Gene3D G3DSA:2.70.98.10 1 273 1.1E-44 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 PRINTS PR00502 NUDIX hydrolase family signature 37 51 5.7E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 PRINTS PR00502 NUDIX hydrolase family signature 51 66 5.7E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 Gene3D G3DSA:3.90.79.10 1 137 3.3E-25 T 28-03-2018 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 SUPERFAMILY SSF55811 5 129 2.17E-28 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 Pfam PF00293 NUDIX domain 8 122 9.8E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CO704_RS14110 c01f7b385932836a123be02cef98168a 145 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 Gene3D G3DSA:3.40.50.300 66 355 8.2E-14 T 28-03-2018 CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 SMART SM00763 19 380 2.2E-216 T 28-03-2018 IPR013153 PrkA AAA domain CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.8E-74 T 28-03-2018 IPR010650 PrkA C-terminal domain CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 PIRSF PIRSF000549 1 644 2.5E-291 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 Pfam PF08298 PrkA AAA domain 20 380 2.2E-177 T 28-03-2018 IPR013153 PrkA AAA domain CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 SUPERFAMILY SSF52540 75 145 1.41E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14070 0c0f9552378b92f58c0579f4e3c87a2e 644 SUPERFAMILY SSF52540 241 366 1.41E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS16025 fb5c3454649e24b64c1241d39d2779d7 277 Gene3D G3DSA:1.10.10.60 8 36 3.4E-4 T 28-03-2018 CO704_RS16025 fb5c3454649e24b64c1241d39d2779d7 277 Gene3D G3DSA:1.10.260.40 71 207 0.017 T 28-03-2018 CO704_RS16025 fb5c3454649e24b64c1241d39d2779d7 277 Gene3D G3DSA:1.10.10.10 37 70 0.0012 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS22925 79c323a7b5439e24a6d221324876d75e 446 PIRSF PIRSF004539 1 444 1.6E-193 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS22925 79c323a7b5439e24a6d221324876d75e 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 7.0E-196 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS22925 79c323a7b5439e24a6d221324876d75e 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 3.1E-146 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS17725 31db8b2529e032c9413b1f9bdb00309f 316 Pfam PF06996 Type VI secretion, TssG 9 296 1.1E-62 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS17725 31db8b2529e032c9413b1f9bdb00309f 316 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 296 4.1E-53 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CO704_RS11115 462dcb272b67bae8f2d77e94ad22552a 391 Gene3D G3DSA:1.20.1250.20 211 387 4.4E-14 T 28-03-2018 CO704_RS11115 462dcb272b67bae8f2d77e94ad22552a 391 Gene3D G3DSA:1.20.1250.20 4 201 1.8E-10 T 28-03-2018 CO704_RS11115 462dcb272b67bae8f2d77e94ad22552a 391 SUPERFAMILY SSF103473 10 385 1.83E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS11115 462dcb272b67bae8f2d77e94ad22552a 391 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 22 382 2.4E-86 T 28-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CO704_RS12050 4ac1f8b427939c1a98cbdee549e4d292 185 SUPERFAMILY SSF55729 7 164 3.6E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CO704_RS12050 4ac1f8b427939c1a98cbdee549e4d292 185 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 1.4E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CO704_RS12050 4ac1f8b427939c1a98cbdee549e4d292 185 Gene3D G3DSA:3.40.630.30 6 174 1.3E-32 T 28-03-2018 CO704_RS14990 7abb9ef7dbec5275dfb80511fe9781dc 130 Pfam PF07007 Lysozyme inhibitor LprI 22 110 1.8E-23 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CO704_RS16645 7d19287c71635b614ae1a80ae48f4a2f 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.3E-14 T 28-03-2018 IPR012994 Membrane bound YbgT-like CO704_RS16645 7d19287c71635b614ae1a80ae48f4a2f 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 3.4E-20 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CO704_RS07770 dbbe1bfbc22c9bcc79bdde5a9bc05ba4 100 SUPERFAMILY SSF47413 20 94 8.16E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS07770 dbbe1bfbc22c9bcc79bdde5a9bc05ba4 100 SMART SM00530 32 87 5.9E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS07770 dbbe1bfbc22c9bcc79bdde5a9bc05ba4 100 Gene3D G3DSA:3.30.1190.10 54 98 2.4E-10 T 28-03-2018 CO704_RS07770 dbbe1bfbc22c9bcc79bdde5a9bc05ba4 100 Pfam PF13744 Helix-turn-helix domain 17 89 3.6E-12 T 28-03-2018 CO704_RS07770 dbbe1bfbc22c9bcc79bdde5a9bc05ba4 100 Gene3D G3DSA:1.10.10.60 27 53 1.4E-5 T 28-03-2018 CO704_RS04060 d31280ec333ca9235670659b606924ab 170 Pfam PF01638 HxlR-like helix-turn-helix 20 104 1.5E-22 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CO704_RS04060 d31280ec333ca9235670659b606924ab 170 Gene3D G3DSA:1.10.10.10 1 166 1.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS04060 d31280ec333ca9235670659b606924ab 170 SUPERFAMILY SSF46785 6 145 1.38E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS18055 878390e0b7de50c1080a03f5269b50cb 84 SUPERFAMILY SSF47598 3 44 3.51E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CO704_RS18055 878390e0b7de50c1080a03f5269b50cb 84 Gene3D G3DSA:1.10.1220.10 1 83 4.0E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CO704_RS05195 e0bcadc6c1498a56261d0951501acd99 180 Pfam PF03079 ARD/ARD' family 4 165 1.7E-36 T 28-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CO704_RS05195 e0bcadc6c1498a56261d0951501acd99 180 SUPERFAMILY SSF51182 4 178 7.79E-44 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS05195 e0bcadc6c1498a56261d0951501acd99 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.907 T 28-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 CO704_RS05195 e0bcadc6c1498a56261d0951501acd99 180 Gene3D G3DSA:2.60.120.10 2 157 8.8E-41 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS21415 192c0846a6e3dfe3a63af936e399cff4 111 Pfam PF03091 CutA1 divalent ion tolerance protein 11 107 1.1E-32 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CO704_RS21415 192c0846a6e3dfe3a63af936e399cff4 111 Gene3D G3DSA:3.30.70.120 4 111 3.8E-36 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CO704_RS21415 192c0846a6e3dfe3a63af936e399cff4 111 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 5 111 37.058 T 28-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 CO704_RS21415 192c0846a6e3dfe3a63af936e399cff4 111 SUPERFAMILY SSF54913 6 110 1.63E-34 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CO704_RS14170 e56c8ece7f2127260100b97b43112f77 167 Pfam PF04463 Protein of unknown function (DUF523) 5 150 2.4E-39 T 28-03-2018 IPR007553 Domain of unknown function DUF523 CO704_RS17645 f7f23f2d75a5edb0d4898502cc6e7862 158 Pfam PF14018 Domain of unknown function (DUF4234) 15 109 9.0E-6 T 28-03-2018 IPR025328 Domain of unknown function DUF4234 CO704_RS21410 ca336d23d30c2e57c26f932393c8e8f3 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.2E-200 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS21410 ca336d23d30c2e57c26f932393c8e8f3 433 PIRSF PIRSF004539 1 433 1.7E-176 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS21410 ca336d23d30c2e57c26f932393c8e8f3 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.6E-141 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CO704_RS22070 61f2be976810b8efdce1daada8faaf20 1139 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 736 4.5E-67 T 28-03-2018 IPR009612 ImcF-related CO704_RS22070 61f2be976810b8efdce1daada8faaf20 1139 Pfam PF06744 Type VI secretion protein IcmF C-terminal 865 1062 1.2E-53 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CO704_RS22230 3abdf315bb2059147ae09879d0d86eb4 415 Pfam PF14281 PD-(D/E)XK nuclease superfamily 39 202 1.5E-27 T 28-03-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 CO704_RS07745 b7e2f832cb805d8f9f666f6b498f6acf 352 Pfam PF04632 Fusaric acid resistance protein family 20 293 2.1E-16 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CO704_RS09345 378ba19aeeff36ede0555e9876e2d373 164 Gene3D G3DSA:2.30.30.410 47 130 6.6E-4 T 28-03-2018 CO704_RS10225 557d04b5510082801b7f3cc31d4d089a 131 Pfam PF03061 Thioesterase superfamily 24 95 7.6E-19 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CO704_RS10225 557d04b5510082801b7f3cc31d4d089a 131 SUPERFAMILY SSF54637 5 130 1.14E-40 T 28-03-2018 IPR029069 HotDog domain CO704_RS10225 557d04b5510082801b7f3cc31d4d089a 131 Gene3D G3DSA:3.10.129.10 1 131 3.4E-36 T 28-03-2018 CO704_RS02985 bcdbc6072373072ba4da25f3db0ffae9 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 34.901 T 28-03-2018 IPR023771 Cell division protein ZapA, eubacteria CO704_RS02985 bcdbc6072373072ba4da25f3db0ffae9 109 SUPERFAMILY SSF102829 6 94 1.96E-25 T 28-03-2018 IPR007838 Cell division protein ZapA-like CO704_RS02985 bcdbc6072373072ba4da25f3db0ffae9 109 Pfam PF05164 Cell division protein ZapA 6 90 1.8E-20 T 28-03-2018 IPR007838 Cell division protein ZapA-like CO704_RS20435 bc59937c935d212282aaf25d9932c82a 440 Pfam PF02378 Phosphotransferase system, EIIC 32 365 4.1E-48 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CO704_RS20435 bc59937c935d212282aaf25d9932c82a 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 437 5.1E-103 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CO704_RS20435 bc59937c935d212282aaf25d9932c82a 440 PIRSF PIRSF006351 4 440 1.7E-132 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CO704_RS15110 7940711109a8bc576bf479668de31ac8 335 Gene3D G3DSA:1.10.3470.10 3 329 5.8E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS15110 7940711109a8bc576bf479668de31ac8 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 321 9.4E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CO704_RS21625 e8f5fce17d856969a115e7095c2b1eae 95 Gene3D G3DSA:1.10.287.1060 12 90 7.8E-4 T 28-03-2018 CO704_RS13465 aa94b96a9bb677ab0f9c8693e399b6dc 333 SUPERFAMILY SSF51679 4 324 6.02E-62 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS13465 aa94b96a9bb677ab0f9c8693e399b6dc 333 Pfam PF00296 Luciferase-like monooxygenase 18 296 1.6E-30 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CO704_RS13465 aa94b96a9bb677ab0f9c8693e399b6dc 333 Gene3D G3DSA:3.20.20.30 3 327 4.4E-59 T 28-03-2018 CO704_RS13465 aa94b96a9bb677ab0f9c8693e399b6dc 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 325 3.1E-102 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CO704_RS12015 b688ce7ad41850f33faa08eaedcbac64 62 Pfam PF15930 Domain of unknown function 1 62 3.1E-28 T 28-03-2018 IPR031830 Uncharacterised protein YdiH CO704_RS21030 1cba1198dea6a13130c7310523e44e30 319 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.047 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CO704_RS21030 1cba1198dea6a13130c7310523e44e30 319 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 3.3E-58 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CO704_RS21030 1cba1198dea6a13130c7310523e44e30 319 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 2.0E-100 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CO704_RS14175 d1ff335982a93849f0cf928606eb2ed4 117 Pfam PF04343 Protein of unknown function, DUF488 4 111 2.1E-28 T 28-03-2018 IPR007438 Protein of unknown function DUF488 CO704_RS03440 54f2435250b680cf93f630eba544aae2 143 Gene3D G3DSA:3.90.1010.10 1 143 3.8E-43 T 28-03-2018 CO704_RS03440 54f2435250b680cf93f630eba544aae2 143 SUPERFAMILY SSF82649 4 141 2.06E-42 T 28-03-2018 CO704_RS03440 54f2435250b680cf93f630eba544aae2 143 Pfam PF02657 Fe-S metabolism associated domain 19 138 4.8E-38 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CO704_RS03440 54f2435250b680cf93f630eba544aae2 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 140 2.9E-72 T 28-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CO704_RS08825 7ebfe71afe97bad5b1b2245ac8da2a88 131 SUPERFAMILY SSF161084 4 127 4.45E-32 T 28-03-2018 CO704_RS08825 7ebfe71afe97bad5b1b2245ac8da2a88 131 Pfam PF01124 MAPEG family 3 120 2.2E-27 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CO704_RS08825 7ebfe71afe97bad5b1b2245ac8da2a88 131 Gene3D G3DSA:1.20.120.550 1 127 2.2E-25 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CO704_RS11930 3611f57f176766f2c95742f0150a80ef 247 Pfam PF01925 Sulfite exporter TauE/SafE 11 240 2.1E-30 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CO704_RS24250 4bfd97905ee04bede7bfcc0d40c9c527 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 220 244 1.0E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24250 4bfd97905ee04bede7bfcc0d40c9c527 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 370 396 1.0E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS24250 4bfd97905ee04bede7bfcc0d40c9c527 602 Pfam PF00361 Proton-conducting membrane transporter 121 401 7.7E-41 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS07460 753b6ace853d6f29030f9506ee2de3ee 405 SUPERFAMILY SSF53756 12 404 6.28E-23 T 28-03-2018 CO704_RS07460 753b6ace853d6f29030f9506ee2de3ee 405 Pfam PF13439 Glycosyltransferase Family 4 13 224 9.4E-8 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CO704_RS07460 753b6ace853d6f29030f9506ee2de3ee 405 Gene3D G3DSA:3.40.50.2000 56 401 1.6E-14 T 28-03-2018 CO704_RS13915 87fdfa655ae2d9aa3460d1a9f80cd8c2 161 Pfam PF07813 LTXXQ motif family protein 47 142 3.0E-19 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CO704_RS13915 87fdfa655ae2d9aa3460d1a9f80cd8c2 161 PIRSF PIRSF034445 1 153 7.8E-31 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.1E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.1E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.1E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Gene3D G3DSA:1.10.1660.10 59 132 2.2E-9 T 28-03-2018 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Pfam PF07739 TipAS antibiotic-recognition domain 151 229 4.1E-8 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Pfam PF07739 TipAS antibiotic-recognition domain 247 317 1.8E-5 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Pfam PF13411 MerR HTH family regulatory protein 3 70 4.4E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Gene3D G3DSA:1.10.490.50 255 341 5.5E-10 T 28-03-2018 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Gene3D G3DSA:1.10.490.50 149 232 2.0E-12 T 28-03-2018 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 Gene3D G3DSA:1.10.1660.10 1 58 1.7E-20 T 28-03-2018 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 SMART SM00422 3 72 6.4E-28 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CO704_RS09620 b8e76221fa5c6adeb134f9e4ceaeb095 350 SUPERFAMILY SSF46955 3 112 5.49E-28 T 28-03-2018 IPR009061 Putative DNA-binding domain CO704_RS11455 b3e6e38432aeeddbc930d099692ef700 254 Gene3D G3DSA:2.40.30.10 13 136 3.4E-27 T 28-03-2018 CO704_RS11455 b3e6e38432aeeddbc930d099692ef700 254 Pfam PF04954 Siderophore-interacting protein 144 253 1.3E-18 T 28-03-2018 IPR007037 Siderophore-interacting protein CO704_RS11455 b3e6e38432aeeddbc930d099692ef700 254 SUPERFAMILY SSF63380 4 140 3.58E-16 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CO704_RS11455 b3e6e38432aeeddbc930d099692ef700 254 Gene3D G3DSA:3.40.50.80 137 254 5.0E-24 T 28-03-2018 CO704_RS11455 b3e6e38432aeeddbc930d099692ef700 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 25 136 2.2E-30 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CO704_RS21520 354d82c7f1e0ca5efbcbcd91181b3392 130 Gene3D G3DSA:2.60.120.10 13 111 1.4E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CO704_RS21520 354d82c7f1e0ca5efbcbcd91181b3392 130 Pfam PF07883 Cupin domain 37 110 8.6E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CO704_RS21520 354d82c7f1e0ca5efbcbcd91181b3392 130 SUPERFAMILY SSF51182 19 111 1.04E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain CO704_RS14045 9a26674c75eac858da42114fe7a6f803 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 80 5.2E-26 T 28-03-2018 IPR009749 Protein of unknown function DUF1315 CO704_RS13145 206f9af8f2263eb0ff4049975655a8d4 389 Pfam PF00155 Aminotransferase class I and II 33 383 2.4E-58 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CO704_RS13145 206f9af8f2263eb0ff4049975655a8d4 389 Gene3D G3DSA:3.40.640.10 48 297 4.6E-60 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CO704_RS13145 206f9af8f2263eb0ff4049975655a8d4 389 SUPERFAMILY SSF53383 11 386 8.74E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CO704_RS13145 206f9af8f2263eb0ff4049975655a8d4 389 Gene3D G3DSA:3.90.1150.10 298 387 2.9E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CO704_RS18835 0de81e8af5e02ce2f7cd6a3911917917 141 Pfam PF06146 Phosphate-starvation-inducible E 65 128 5.9E-15 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CO704_RS18835 0de81e8af5e02ce2f7cd6a3911917917 141 PIRSF PIRSF029598 6 140 1.6E-35 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CO704_RS23220 2b0316ef0cfd9d2dbebeaac6e6efec43 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 2.3E-77 T 28-03-2018 IPR007435 Protein of unknown function DUF484 CO704_RS23220 2b0316ef0cfd9d2dbebeaac6e6efec43 234 Gene3D G3DSA:3.30.450.40 48 230 2.4E-5 T 28-03-2018 IPR029016 GAF domain-like CO704_RS09590 8ef73d618d9ea00a6a4698d26cf05a53 194 Pfam PF14065 Protein of unknown function (DUF4255) 8 177 7.2E-26 T 28-03-2018 IPR025351 Protein of unknown function DUF4255 CO704_RS16045 d5f5fd8485d93383a84be4153f6702cd 132 Pfam PF05932 Tir chaperone protein (CesT) family 18 127 2.0E-7 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 CO704_RS16045 d5f5fd8485d93383a84be4153f6702cd 132 SUPERFAMILY SSF69635 17 131 2.59E-8 T 28-03-2018 CO704_RS16045 d5f5fd8485d93383a84be4153f6702cd 132 Gene3D G3DSA:3.30.1460.10 6 131 3.6E-19 T 28-03-2018 CO704_RS17325 05739c66e3fa2f02ddb1424c6af35dfa 125 Pfam PF11604 Copper binding periplasmic protein CusF 59 121 3.3E-19 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF CO704_RS16740 0c2c7e8343a3e34bbe10c1ca94436a64 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 7 29 1.1E-5 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CO704_RS16740 0c2c7e8343a3e34bbe10c1ca94436a64 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 3.0E-9 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CO704_RS02845 421010064344361887e792df0b58d931 53 Pfam PF11036 Virulence promoting factor 6 43 2.9E-9 T 28-03-2018 IPR020196 Uncharacterised protein family YqgB CO704_RS16930 24af7f7bc28a51e63524e08a44364299 368 Pfam PF10123 Mu-like prophage I protein 20 355 8.7E-85 T 28-03-2018 IPR012106 Protease, Mu phage/prophage I type CO704_RS16930 24af7f7bc28a51e63524e08a44364299 368 PIRSF PIRSF016624 2 363 3.4E-64 T 28-03-2018 IPR012106 Protease, Mu phage/prophage I type CO704_RS17745 c43f3ee18b3b053d74c9c404e01fc873 344 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 339 4.6E-68 T 28-03-2018 IPR017740 Type VI secretion system-associated, ImpA CO704_RS17745 c43f3ee18b3b053d74c9c404e01fc873 344 Pfam PF06812 ImpA, N-terminal, type VI secretion system 1 123 4.1E-32 T 28-03-2018 IPR010657 ImpA, N-terminal CO704_RS06545 923f1d96f34bbfff4ab93ad4f5e95ef1 148 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 1.3E-31 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CO704_RS06545 923f1d96f34bbfff4ab93ad4f5e95ef1 148 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.967 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CO704_RS11065 980f748d562a450e7f96e123ec8176d4 307 SUPERFAMILY SSF53474 18 306 4.14E-69 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11065 980f748d562a450e7f96e123ec8176d4 307 Gene3D G3DSA:3.40.50.1820 25 307 9.9E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CO704_RS11065 980f748d562a450e7f96e123ec8176d4 307 Pfam PF00561 alpha/beta hydrolase fold 44 278 1.7E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CO704_RS22165 3c68bcedc940b0a6c4404d3700341fc2 196 Pfam PF11198 Protein of unknown function (DUF2857) 12 183 2.3E-61 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 CO704_RS17705 5fa808d6c11aa94ab91ed7befc70f9f6 72 Gene3D G3DSA:1.10.10.10 21 72 9.0E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS17705 5fa808d6c11aa94ab91ed7befc70f9f6 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 62 5.1E-9 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CO704_RS03755 ce5b82ef389d3ae19d9543233134ff15 180 Pfam PF01292 Prokaryotic cytochrome b561 8 173 1.6E-24 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CO704_RS03755 ce5b82ef389d3ae19d9543233134ff15 180 SUPERFAMILY SSF81342 3 177 2.28E-29 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CO704_RS03755 ce5b82ef389d3ae19d9543233134ff15 180 Gene3D G3DSA:1.20.950.20 1 179 1.7E-27 T 28-03-2018 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 28-03-2018 IPR025505 FHIPEP conserved site CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 9.5E-55 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 Pfam PF00771 FHIPEP family 27 689 1.9E-237 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS17580 782bb57c5e8c9cd02870d7ecaf3823d6 699 PIRSF PIRSF005419 1 699 6.3E-221 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CO704_RS21525 f9063d6ac1f993ddedec574cbb916a3e 58 SUPERFAMILY SSF103515 4 58 2.35E-8 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS21525 f9063d6ac1f993ddedec574cbb916a3e 58 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1 58 7.6E-14 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CO704_RS21525 f9063d6ac1f993ddedec574cbb916a3e 58 Gene3D G3DSA:2.40.128.130 1 58 2.3E-7 T 28-03-2018 CO704_RS06880 cdbb4a12e8d9c8e986df5342e9fd200f 86 Pfam PF10749 Protein of unknown function (DUF2534) 4 82 2.0E-36 T 28-03-2018 IPR019685 Protein of unknown function DUF2534 CO704_RS19075 195f285a138b99e844af2fb466adf863 158 Gene3D G3DSA:3.30.420.10 1 154 7.7E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19075 195f285a138b99e844af2fb466adf863 158 SUPERFAMILY SSF53098 3 143 4.55E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CO704_RS19075 195f285a138b99e844af2fb466adf863 158 Pfam PF00075 RNase H 3 141 1.1E-52 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CO704_RS19075 195f285a138b99e844af2fb466adf863 158 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 38.001 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 CO704_RS14850 17de3476bb876b04022540ede2d5564b 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 8 129 7.1E-35 T 28-03-2018 IPR018893 Type VIII secretion system, CsgF CO704_RS07790 7a83cd58c9d76c73c2790f1370a06020 508 PIRSF PIRSF002744 1 487 1.5E-81 T 28-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CO704_RS07790 7a83cd58c9d76c73c2790f1370a06020 508 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 23 398 1.1E-28 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CO704_RS02265 dde61a4c05decd46b9cc98dede95aa35 238 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 3.4E-52 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CO704_RS02265 dde61a4c05decd46b9cc98dede95aa35 238 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 2.6E-61 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CO704_RS25640 78de4c246e61f2ef17f22fbcd1ecdac4 447 Gene3D G3DSA:3.30.300.30 340 447 4.7E-15 T 28-03-2018 CO704_RS25640 78de4c246e61f2ef17f22fbcd1ecdac4 447 Pfam PF00501 AMP-binding enzyme 121 295 2.8E-9 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CO704_RS25640 78de4c246e61f2ef17f22fbcd1ecdac4 447 Gene3D G3DSA:3.40.50.980 6 138 5.8E-10 T 28-03-2018 CO704_RS25640 78de4c246e61f2ef17f22fbcd1ecdac4 447 SUPERFAMILY SSF56801 13 446 1.96E-51 T 28-03-2018 CO704_RS25640 78de4c246e61f2ef17f22fbcd1ecdac4 447 Gene3D G3DSA:3.40.50.980 139 294 1.1E-15 T 28-03-2018 CO704_RS25835 d23fd0bccb3c0a2b336055aecd592591 88 Gene3D G3DSA:2.40.128.130 1 88 2.3E-5 T 28-03-2018 CO704_RS25835 d23fd0bccb3c0a2b336055aecd592591 88 SUPERFAMILY SSF103515 2 87 1.05E-6 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS25835 d23fd0bccb3c0a2b336055aecd592591 88 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 87 5.4E-15 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CO704_RS25835 d23fd0bccb3c0a2b336055aecd592591 88 Pfam PF03797 Autotransporter beta-domain 2 86 5.6E-7 T 28-03-2018 IPR005546 Autotransporter beta-domain CO704_RS18470 ffb63086b62ad41b6eece036d3735953 153 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.398 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CO704_RS18470 ffb63086b62ad41b6eece036d3735953 153 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 144 3.9E-50 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CO704_RS08345 58e69efe2d51a030c2a4ec9d509a5547 304 PIRSF PIRSF016660 1 302 2.6E-123 T 28-03-2018 IPR008526 Inner membrane protein YedI CO704_RS08345 58e69efe2d51a030c2a4ec9d509a5547 304 Pfam PF05661 Protein of unknown function (DUF808) 4 291 3.8E-113 T 28-03-2018 IPR008526 Inner membrane protein YedI CO704_RS05725 6f731eef7ca620fcab29f72509ee336a 149 PIRSF PIRSF006105 4 149 3.1E-51 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CO704_RS05725 6f731eef7ca620fcab29f72509ee336a 149 SUPERFAMILY SSF48695 48 145 1.4E-40 T 28-03-2018 IPR011031 Multihaem cytochrome CO704_RS05725 6f731eef7ca620fcab29f72509ee336a 149 Gene3D G3DSA:1.10.1130.10 62 128 7.6E-29 T 28-03-2018 CO704_RS05725 6f731eef7ca620fcab29f72509ee336a 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 1.3E-43 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CO704_RS22090 7799361247fe7cd682965bfb7caae976 215 Pfam PF11153 Protein of unknown function (DUF2931) 4 213 3.4E-51 T 28-03-2018 IPR021326 Protein of unknown function DUF2931 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 Gene3D G3DSA:1.10.10.10 18 199 3.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 9.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 9.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 9.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 SMART SM00421 135 192 2.5E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 SUPERFAMILY SSF46894 124 186 2.45E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CO704_RS08375 0c628eb2c0bc0bf6f943d129da8556be 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 48.863 T 28-03-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 CO704_RS03460 758858c4a494a115f97cdfc44ead860e 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 2.0E-23 T 28-03-2018 IPR006696 Protein of unknown function DUF423 CO704_RS21495 b53275d60ccef5f098105ed445caf527 311 Pfam PF06924 Protein of unknown function (DUF1281) 9 141 5.8E-54 T 28-03-2018 IPR009694 Protein of unknown function DUF1281 CO704_RS21495 b53275d60ccef5f098105ed445caf527 311 SUPERFAMILY SSF160940 3 276 5.36E-118 T 28-03-2018 CO704_RS21495 b53275d60ccef5f098105ed445caf527 311 Gene3D G3DSA:1.10.3530.10 31 207 1.6E-67 T 28-03-2018 IPR023136 Api92-like domain CO704_RS07465 bd8e563f5a06f5a1bad397b9b16ee1ae 410 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 402 1.8E-239 T 28-03-2018 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD CO704_RS10595 1c436f462400e1aedc0963130cfa6e98 167 Gene3D G3DSA:3.50.100.10 61 152 7.9E-28 T 28-03-2018 CO704_RS10595 1c436f462400e1aedc0963130cfa6e98 167 Pfam PF07566 Domain of Unknown Function (DUF1543) 90 134 2.9E-9 T 28-03-2018 IPR011440 Domain of unknown function DUF1543 CO704_RS10595 1c436f462400e1aedc0963130cfa6e98 167 Pfam PF07566 Domain of Unknown Function (DUF1543) 15 66 2.8E-19 T 28-03-2018 IPR011440 Domain of unknown function DUF1543 CO704_RS10595 1c436f462400e1aedc0963130cfa6e98 167 Gene3D G3DSA:3.10.20.10 1 60 9.6E-21 T 28-03-2018 CO704_RS06105 e028b4d4db4412fe14983defcd9ceb33 71 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 2.9E-13 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CO704_RS15880 65469345c6d971db05f95d2c6f4eef65 159 Pfam PF10722 Putative bacterial sensory transduction regulator 8 131 8.1E-13 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN CO704_RS17775 914913b2511e25b1743f98d1b61a9bc5 374 Pfam PF12486 Type VI secretion system, EvfB, or VasL 252 363 5.7E-14 T 28-03-2018 IPR021069 ImpA, C-terminal CO704_RS07170 4458228b3fd92f6d95545715bd151611 373 SUPERFAMILY SSF50952 23 371 2.09E-44 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CO704_RS07170 4458228b3fd92f6d95545715bd151611 373 Gene3D G3DSA:2.120.10.30 272 364 1.6E-18 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CO704_RS07170 4458228b3fd92f6d95545715bd151611 373 Gene3D G3DSA:2.120.10.30 16 271 3.1E-47 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CO704_RS07170 4458228b3fd92f6d95545715bd151611 373 Pfam PF07995 Glucose / Sorbosone dehydrogenase 35 367 5.4E-133 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CO704_RS13075 0e81928b64c8cccfe802cd106449f9cb 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 1.2E-57 T 28-03-2018 IPR021747 Protein of unknown function DUF3313 CO704_RS13425 8e0e22b2b4c63d201730e4bd3806253d 154 Pfam PF05433 Glycine zipper 2TM domain 61 102 3.9E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CO704_RS16870 ba90c97ecb89460a0dc591ed70343b6c 131 Pfam PF06252 Protein of unknown function (DUF1018) 18 127 7.0E-23 T 28-03-2018 IPR009363 Bacteriophage Mu, Gp16 CO704_RS10670 654312f3bb70d2e9fd685452f7c457db 399 Gene3D G3DSA:1.20.1250.20 204 388 6.5E-16 T 28-03-2018 CO704_RS10670 654312f3bb70d2e9fd685452f7c457db 399 SUPERFAMILY SSF103473 19 388 3.4E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain CO704_RS10670 654312f3bb70d2e9fd685452f7c457db 399 Gene3D G3DSA:1.20.1250.20 14 201 1.8E-17 T 28-03-2018 CO704_RS10670 654312f3bb70d2e9fd685452f7c457db 399 Pfam PF07690 Major Facilitator Superfamily 27 354 1.5E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CO704_RS17910 6e2e09abdd3dc31392779f23e5555403 248 Pfam PF09836 Putative DNA-binding domain 10 93 8.5E-18 T 28-03-2018 IPR018640 Putative DNA-binding domain, bacteria CO704_RS16630 069589940f629ae350415011ca5e7b5b 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 3.5E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CO704_RS16630 069589940f629ae350415011ca5e7b5b 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 2.0E-93 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CO704_RS00420 603ae63b096aececb98d547c629b7725 213 Gene3D G3DSA:2.30.110.10 1 212 4.6E-55 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS00420 603ae63b096aececb98d547c629b7725 213 Pfam PF04299 Putative FMN-binding domain 1 165 5.5E-59 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type CO704_RS00420 603ae63b096aececb98d547c629b7725 213 PIRSF PIRSF010372 1 212 2.1E-68 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type CO704_RS00420 603ae63b096aececb98d547c629b7725 213 SUPERFAMILY SSF50475 9 193 2.12E-30 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CO704_RS07590 ec876b579d7543e3f68c2429132fcfa8 400 Pfam PF01943 Polysaccharide biosynthesis protein 3 249 1.1E-8 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CO704_RS12075 d1bf6b62dfc3101fe99499f8ac342f8d 159 Pfam PF10908 Protein of unknown function (DUF2778) 23 147 4.0E-34 T 28-03-2018 IPR021225 Protein of unknown function DUF2778 CO704_RS07600 2a6aa5cd03b8a87952cdd28682b110ff 370 SUPERFAMILY SSF53756 8 365 1.83E-41 T 28-03-2018 CO704_RS07600 2a6aa5cd03b8a87952cdd28682b110ff 370 Pfam PF00534 Glycosyl transferases group 1 188 340 1.7E-20 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CO704_RS07600 2a6aa5cd03b8a87952cdd28682b110ff 370 Gene3D G3DSA:3.40.50.2000 177 352 2.4E-26 T 28-03-2018 CO704_RS00790 93f0c84df68dca2fc52f285f685cde09 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 37 699 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CO704_RS00790 93f0c84df68dca2fc52f285f685cde09 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 706 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CO704_RS14440 a91916e5933bfd7f8ae848d0cf0b1a93 595 ProSitePatterns PS00818 Dps protein family signature 1. 557 573 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CO704_RS14440 a91916e5933bfd7f8ae848d0cf0b1a93 595 Pfam PF04183 IucA / IucC family 157 386 1.3E-50 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CO704_RS14440 a91916e5933bfd7f8ae848d0cf0b1a93 595 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 575 1.9E-28 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain CO704_RS07585 d192292afa6b30ad0321ea056f603593 523 Gene3D G3DSA:3.40.50.2000 291 422 6.3E-5 T 28-03-2018 CO704_RS19540 8baca9df97cd5bcba521e4d53b5cf4a3 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 4.3E-158 T 28-03-2018 IPR031347 Protein AmpE CO704_RS04545 260d7ebfe517b4442fb3dc7d0072d9a7 192 Pfam PF01810 LysE type translocator 12 191 1.4E-10 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CO704_RS22020 b68dd22aac9865cd445fb85ce827030d 215 Gene3D G3DSA:1.10.10.60 56 153 0.024 T 28-03-2018 CO704_RS22005 58e6bb582981f23c9211da637c0c6f49 266 Pfam PF08900 Domain of unknown function (DUF1845) 13 232 3.7E-79 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 CO704_RS22005 58e6bb582981f23c9211da637c0c6f49 266 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 15 232 3.6E-75 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 CO704_RS22775 5e25fd3b823ac779713caaefc44e9997 87 Pfam PF07362 Post-segregation antitoxin CcdA 17 87 1.8E-22 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA CO704_RS07725 f2c50ddd12e34c14228c3e6b096b3232 383 Pfam PF01757 Acyltransferase family 10 352 8.3E-24 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS24370 f5c1d07b0585bae5ea0ede0cad9a10d1 112 Pfam PF13983 YsaB-like lipoprotein 30 103 1.8E-28 T 28-03-2018 IPR025728 YsaB-like lipoprotein CO704_RS17420 6c11790f52dfcc94bcd1bdc9a82be443 54 Pfam PF11692 Protein of unknown function (DUF3289) 4 32 5.2E-8 T 28-03-2018 IPR017483 Conserved hypothetical protein CHP03034 CO704_RS18505 d365c6ec20b0df880892d95539db25ac 70 Pfam PF10953 Protein of unknown function (DUF2754) 2 69 1.8E-40 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ CO704_RS18505 d365c6ec20b0df880892d95539db25ac 70 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 2 69 3.0E-24 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ CO704_RS04080 3b0182a9822ed884539b0b40f0600f43 119 Gene3D G3DSA:1.10.287.700 17 119 3.1E-7 T 28-03-2018 CO704_RS04190 92c76c146bbf31e38e18ddfae9a6f878 126 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 9.4E-49 T 28-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CO704_RS25055 7e08631f4eabd061ed5195e1f84c5446 260 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 36 255 2.0E-42 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CO704_RS25055 7e08631f4eabd061ed5195e1f84c5446 260 Gene3D G3DSA:3.30.428.30 27 255 4.0E-44 T 28-03-2018 CO704_RS25055 7e08631f4eabd061ed5195e1f84c5446 260 SUPERFAMILY SSF54197 36 256 6.12E-39 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CO704_RS00385 07218b385869b692e5d36c138b1f6d91 265 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 184 263 2.0E-13 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS00385 07218b385869b692e5d36c138b1f6d91 265 SUPERFAMILY SSF74653 134 264 1.28E-22 T 28-03-2018 CO704_RS00385 07218b385869b692e5d36c138b1f6d91 265 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 184 263 1.3E-17 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CO704_RS00385 07218b385869b692e5d36c138b1f6d91 265 Gene3D G3DSA:3.30.1150.10 43 265 2.9E-19 T 28-03-2018 CO704_RS25530 df6523e95ccc5ae997836a528b82f0a0 126 Gene3D G3DSA:1.10.260.40 1 79 3.6E-11 T 28-03-2018 CO704_RS25530 df6523e95ccc5ae997836a528b82f0a0 126 SUPERFAMILY SSF47413 9 73 4.22E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CO704_RS25530 df6523e95ccc5ae997836a528b82f0a0 126 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 17 72 2.0E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS25530 df6523e95ccc5ae997836a528b82f0a0 126 SMART SM00530 13 71 0.0093 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CO704_RS19355 9f6aebab61f1c4ae53f1a683bd685917 206 Pfam PF03458 UPF0126 domain 92 164 2.0E-19 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CO704_RS19355 9f6aebab61f1c4ae53f1a683bd685917 206 Pfam PF03458 UPF0126 domain 4 78 1.5E-22 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CO704_RS19675 9583351590ba510c0dcc359f31594b85 120 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 35 117 1.1E-27 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CO704_RS19675 9583351590ba510c0dcc359f31594b85 120 Pfam PF04999 Cell division protein FtsL 23 118 1.6E-34 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CO704_RS19675 9583351590ba510c0dcc359f31594b85 120 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 117 16.838 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CO704_RS21645 745d3f694aa0e777e0d61e8c154c474e 242 Pfam PF06952 PsiA protein 1 237 2.7E-85 T 28-03-2018 IPR009713 Uncharacterised protein family PsiA CO704_RS11375 64b9449ad1fa463023be1df5aeb3b47b 300 Pfam PF00892 EamA-like transporter family 9 136 3.9E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS11375 64b9449ad1fa463023be1df5aeb3b47b 300 Pfam PF00892 EamA-like transporter family 149 289 1.3E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS11375 64b9449ad1fa463023be1df5aeb3b47b 300 SUPERFAMILY SSF103481 190 293 2.09E-13 T 28-03-2018 CO704_RS11375 64b9449ad1fa463023be1df5aeb3b47b 300 SUPERFAMILY SSF103481 41 137 6.02E-16 T 28-03-2018 CO704_RS13740 050e47e6bfca058b057985bc67bb1bf7 343 Pfam PF05171 Haemin-degrading HemS.ChuX domain 205 336 3.7E-42 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CO704_RS13740 050e47e6bfca058b057985bc67bb1bf7 343 Pfam PF05171 Haemin-degrading HemS.ChuX domain 28 156 3.1E-42 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CO704_RS13740 050e47e6bfca058b057985bc67bb1bf7 343 Gene3D G3DSA:3.40.1570.10 183 339 9.2E-55 T 28-03-2018 CO704_RS13740 050e47e6bfca058b057985bc67bb1bf7 343 SUPERFAMILY SSF144064 5 337 1.18E-131 T 28-03-2018 CO704_RS13740 050e47e6bfca058b057985bc67bb1bf7 343 Gene3D G3DSA:3.40.1570.10 1 182 1.1E-53 T 28-03-2018 CO704_RS19760 9abc404b0028da56adcc71c7ba8970f6 255 Pfam PF09335 SNARE associated Golgi protein 36 159 9.7E-18 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS00380 f810335ecf406e221186bd9c093ffa82 162 Pfam PF00156 Phosphoribosyl transferase domain 6 125 6.4E-18 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CO704_RS00380 f810335ecf406e221186bd9c093ffa82 162 Gene3D G3DSA:3.40.50.2020 1 162 1.1E-21 T 28-03-2018 CO704_RS00380 f810335ecf406e221186bd9c093ffa82 162 SUPERFAMILY SSF53271 3 161 2.49E-32 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CO704_RS03860 902f4be6e67f64517377439e34e7abf2 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CO704_RS03860 902f4be6e67f64517377439e34e7abf2 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 3.5E-31 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CO704_RS03860 902f4be6e67f64517377439e34e7abf2 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CO704_RS03860 902f4be6e67f64517377439e34e7abf2 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.401 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CO704_RS03860 902f4be6e67f64517377439e34e7abf2 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CO704_RS19025 4aa6a7fb260988110cf1119ec261e4c5 62 Pfam PF13318 Protein of unknown function (DUF4089) 11 60 7.1E-18 T 28-03-2018 IPR025148 Protein of unknown function DUF4089 CO704_RS24730 e01d599a9b929628d06bc1d5f8ba822a 294 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 288 4.4E-93 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CO704_RS21370 0c627143b15922434b7a8481cc009de4 44 Pfam PF08085 Entericidin EcnA/B family 22 42 2.8E-6 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CO704_RS17515 4325002373aa97be987eae5ce0d97998 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 7 139 1.6E-19 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CO704_RS17515 4325002373aa97be987eae5ce0d97998 145 Pfam PF02050 Flagellar FliJ protein 25 136 7.2E-12 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CO704_RS06350 1a0463acd50f711761ab85ec43627cb3 219 Pfam PF09335 SNARE associated Golgi protein 49 177 1.5E-26 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS24765 a711710fe39904e9c824f2d8d27b8409 110 Pfam PF07119 Protein of unknown function (DUF1375) 16 77 1.8E-12 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 CO704_RS21915 43bee6d7653a7f96fad4378f7843bd30 219 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 3.0E-89 T 28-03-2018 IPR021548 Protein of unknown function DUF2895 CO704_RS21915 43bee6d7653a7f96fad4378f7843bd30 219 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 9.1E-94 T 28-03-2018 IPR021548 Protein of unknown function DUF2895 CO704_RS07050 ab8d32af278494d04256f7061ed9efdc 252 Gene3D G3DSA:2.60.40.10 32 172 2.2E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CO704_RS07050 ab8d32af278494d04256f7061ed9efdc 252 SUPERFAMILY SSF49354 32 161 1.15E-5 T 28-03-2018 IPR008962 PapD-like CO704_RS20760 23ccb64a21754eb643092e5fbd8752b6 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 3.4E-70 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS20760 23ccb64a21754eb643092e5fbd8752b6 211 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 1.7E-66 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS20760 23ccb64a21754eb643092e5fbd8752b6 211 SUPERFAMILY SSF55068 5 208 5.36E-84 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS20760 23ccb64a21754eb643092e5fbd8752b6 211 Gene3D G3DSA:3.30.1060.10 26 204 4.7E-78 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS20760 23ccb64a21754eb643092e5fbd8752b6 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.946 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CO704_RS19375 8b35621b177357ca356f65c82046d919 659 SUPERFAMILY SSF81345 6 324 2.75E-61 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS19375 8b35621b177357ca356f65c82046d919 659 Pfam PF01032 FecCD transport family 19 322 3.6E-67 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS19375 8b35621b177357ca356f65c82046d919 659 Pfam PF01032 FecCD transport family 360 656 8.2E-68 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CO704_RS19375 8b35621b177357ca356f65c82046d919 659 SUPERFAMILY SSF81345 342 656 2.75E-67 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CO704_RS19375 8b35621b177357ca356f65c82046d919 659 Gene3D G3DSA:1.10.3470.10 1 332 1.7E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS19375 8b35621b177357ca356f65c82046d919 659 Gene3D G3DSA:1.10.3470.10 341 659 2.3E-44 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CO704_RS20715 b6001d9604a4abb9693799cad7afbb64 123 Pfam PF05656 Protein of unknown function (DUF805) 11 117 1.3E-33 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CO704_RS14915 ac833cad982502f94f9fec3c92d031e0 303 SUPERFAMILY SSF52540 106 144 6.52E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14915 ac833cad982502f94f9fec3c92d031e0 303 SUPERFAMILY SSF52540 171 252 6.52E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS14915 ac833cad982502f94f9fec3c92d031e0 303 Gene3D G3DSA:3.40.50.300 109 264 9.4E-10 T 28-03-2018 CO704_RS14915 ac833cad982502f94f9fec3c92d031e0 303 Pfam PF06414 Zeta toxin 110 244 9.5E-14 T 28-03-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 CO704_RS00230 cbd153fd3adaba6e4736262649755b81 179 SUPERFAMILY SSF158668 9 171 2.88E-56 T 28-03-2018 CO704_RS00230 cbd153fd3adaba6e4736262649755b81 179 Pfam PF05068 Mannitol repressor 12 171 1.9E-58 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like CO704_RS00230 cbd153fd3adaba6e4736262649755b81 179 Gene3D G3DSA:1.20.120.330 10 171 9.7E-56 T 28-03-2018 CO704_RS13265 40894fffaee5f51a88fc8cccd5a3d1a3 527 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 479 1.4E-132 T 28-03-2018 IPR010352 Protein of unknown function DUF945 CO704_RS25285 d24a8a8bd6eb1becb07b0a5b920b3da6 179 Pfam PF11188 Protein of unknown function (DUF2975) 70 179 1.2E-11 T 28-03-2018 IPR021354 Protein of unknown function DUF2975 CO704_RS16900 ef4d75ae6707cdd776bec6dfd08b8eb9 172 Pfam PF08822 Protein of unknown function (DUF1804) 1 169 1.5E-44 T 28-03-2018 IPR014926 Bacteriophage D3112, Orf24 CO704_RS16900 ef4d75ae6707cdd776bec6dfd08b8eb9 172 Gene3D G3DSA:1.10.10.60 5 93 2.4E-5 T 28-03-2018 CO704_RS16190 b5432e72e3aee4f7c0e7a0910fc5287c 166 Gene3D G3DSA:1.10.530.10 17 151 8.0E-19 T 28-03-2018 CO704_RS16190 b5432e72e3aee4f7c0e7a0910fc5287c 166 SUPERFAMILY SSF53955 13 142 1.69E-26 T 28-03-2018 IPR023346 Lysozyme-like domain CO704_RS16190 b5432e72e3aee4f7c0e7a0910fc5287c 166 Pfam PF01464 Transglycosylase SLT domain 23 137 3.1E-20 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CO704_RS19060 1908f6a75399d0c15a4483321958638f 307 SUPERFAMILY SSF103481 204 306 8.24E-13 T 28-03-2018 CO704_RS19060 1908f6a75399d0c15a4483321958638f 307 SUPERFAMILY SSF103481 55 157 4.58E-16 T 28-03-2018 CO704_RS19060 1908f6a75399d0c15a4483321958638f 307 Pfam PF00892 EamA-like transporter family 22 154 9.3E-25 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS19060 1908f6a75399d0c15a4483321958638f 307 Pfam PF00892 EamA-like transporter family 169 305 3.8E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CO704_RS21740 e9b453b914d4e92198f65d6eaec5e273 97 Pfam PF06069 PerC transcriptional activator 27 78 6.9E-8 T 28-03-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 CO704_RS18580 f3bef1458d4c3b8cd827aeebafdf9f38 464 PIRSF PIRSF006060 6 463 6.9E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CO704_RS18580 f3bef1458d4c3b8cd827aeebafdf9f38 464 Pfam PF00324 Amino acid permease 31 438 7.6E-114 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CO704_RS18580 f3bef1458d4c3b8cd827aeebafdf9f38 464 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CO704_RS21385 8fc53b1db6ba03794eb2912d50621d13 117 Pfam PF13698 Domain of unknown function (DUF4156) 24 115 7.2E-30 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 CO704_RS00900 a48533c3c3b129d068779b3ec0a62a7d 434 Pfam PF10797 Protein of unknown function 7 431 1.6E-168 T 28-03-2018 IPR019733 Uncharacterised protein family YhfT CO704_RS22545 018c523edb932ba83c6d4e4d3582fd80 161 Pfam PF16747 Surface-adhesin protein E 23 141 8.9E-16 T 28-03-2018 IPR031939 Surface-adhesin protein E-like CO704_RS02755 dc56aa362c084473875c2cae485d4edd 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.5E-41 T 28-03-2018 IPR007416 Protein of unknown function DUF469 CO704_RS25505 240f1d36730e93ce3327d2f15f42ab58 314 Pfam PF07057 DNA helicase TraI 6 97 1.3E-20 T 28-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CO704_RS18895 d63fa0ee2c5a47968b6a1fdabd6d8984 139 Pfam PF10980 Protein of unknown function (DUF2787) 32 131 7.3E-29 T 28-03-2018 IPR021248 Protein of unknown function DUF2787 CO704_RS21715 17f614dfca1d3095adffa39a80125a8b 105 Gene3D G3DSA:3.10.350.10 49 98 9.7E-5 T 28-03-2018 CO704_RS04240 96fdb7dd0f52ffaa54b7544d9d986a37 321 Pfam PF01757 Acyltransferase family 97 309 4.6E-8 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CO704_RS01485 af8d4316873eae1f8d80609f3dcc3a38 653 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 54.317 T 28-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 CO704_RS01485 af8d4316873eae1f8d80609f3dcc3a38 653 Pfam PF04632 Fusaric acid resistance protein family 9 650 8.7E-157 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CO704_RS17865 35231134abfe1a8998c2bd05a99028b8 83 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 2.8E-41 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 CO704_RS17865 35231134abfe1a8998c2bd05a99028b8 83 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 36 81 2.0E-15 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 CO704_RS07220 90b07d2a4405fb1e70cd415b901908bf 157 Pfam PF07308 Protein of unknown function (DUF1456) 86 149 1.2E-21 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 CO704_RS07220 90b07d2a4405fb1e70cd415b901908bf 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.2E-24 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 CO704_RS12520 4caa9b2b2c55f750824f98ae38f36a32 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 444 5.5E-128 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS12520 4caa9b2b2c55f750824f98ae38f36a32 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 5.6E-137 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS06890 e61cd4f0c0b2c7aa78d1efdde281fbc2 146 Pfam PF11162 Protein of unknown function (DUF2946) 12 139 1.3E-8 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 CO704_RS19920 c25cb5abfa90afa290cd4ff2380ae475 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 5.4E-42 T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CO704_RS19920 c25cb5abfa90afa290cd4ff2380ae475 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CO704_RS18385 82e47ca4570b91f0db655e315aa3907c 213 SUPERFAMILY SSF52499 3 204 4.19E-49 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS18385 82e47ca4570b91f0db655e315aa3907c 213 Pfam PF00857 Isochorismatase family 12 165 6.0E-24 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CO704_RS18385 82e47ca4570b91f0db655e315aa3907c 213 Gene3D G3DSA:3.40.50.850 2 207 1.6E-34 T 28-03-2018 CO704_RS18805 946c6495a6364d042a5ed9bb7c249d34 173 Pfam PF04449 CS1 type fimbrial major subunit 23 159 1.3E-43 T 28-03-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 CO704_RS22730 36a233f1b4e2ba5eeae3c01896c68341 83 Pfam PF11106 Exopolysaccharide production protein YjbE 1 80 1.0E-22 T 28-03-2018 IPR025858 Exopolysaccharide production protein YjbE CO704_RS12525 43c0344c5a8221e339b89689593096fb 515 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 91 511 7.7E-171 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CO704_RS12525 43c0344c5a8221e339b89689593096fb 515 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 47 511 1.0E-204 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CO704_RS17075 00930cf0cfe05271dd40c32cc0979c52 108 Pfam PF13982 YbfN-like lipoprotein 21 107 9.8E-48 T 28-03-2018 IPR025727 YbfN-like lipoprotein CO704_RS21670 944a96e4bb1da8d49b01065690a883a3 168 Pfam PF07275 Antirestriction protein (ArdA) 10 166 9.2E-33 T 28-03-2018 IPR009899 Antirestriction CO704_RS20240 af19019ed771a07508de52f554b25b97 169 Pfam PF10696 Protein of unknown function (DUF2501) 88 166 5.0E-26 T 28-03-2018 IPR019637 Protein of unknown function DUF2501 CO704_RS08955 8ee3332f217ad0f09a2eda729318ebb7 116 Gene3D G3DSA:1.10.10.710 22 83 4.2E-26 T 28-03-2018 CO704_RS08955 8ee3332f217ad0f09a2eda729318ebb7 116 Pfam PF07130 YebG protein 1 74 1.3E-32 T 28-03-2018 IPR009813 Uncharacterised protein family YebG CO704_RS20985 badde113361f690e5cb652789ac15a94 440 Gene3D G3DSA:3.40.630.40 184 415 2.6E-58 T 28-03-2018 CO704_RS20985 badde113361f690e5cb652789ac15a94 440 SUPERFAMILY SSF53187 335 411 3.45E-53 T 28-03-2018 CO704_RS20985 badde113361f690e5cb652789ac15a94 440 SUPERFAMILY SSF53187 187 283 3.45E-53 T 28-03-2018 CO704_RS20985 badde113361f690e5cb652789ac15a94 440 SMART SM00646 249 408 2.9E-75 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS20985 badde113361f690e5cb652789ac15a94 440 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 189 408 1.4E-48 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CO704_RS08725 eb111e39277ddb6ef737b59496281eeb 176 Pfam PF05229 Spore Coat Protein U domain 28 172 1.8E-20 T 28-03-2018 IPR007893 Spore coat protein U CO704_RS08725 eb111e39277ddb6ef737b59496281eeb 176 SMART SM00972 112 173 7.4E-8 T 28-03-2018 IPR007893 Spore coat protein U CO704_RS05055 a9d768011bf066b2f29ed698913b1acc 135 SUPERFAMILY SSF102462 1 135 5.13E-45 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CO704_RS05055 a9d768011bf066b2f29ed698913b1acc 135 Pfam PF09391 Protein of unknown function (DUF2000) 4 135 1.3E-42 T 28-03-2018 IPR018988 Protein of unknown function DUF2000 CO704_RS05055 a9d768011bf066b2f29ed698913b1acc 135 Gene3D G3DSA:3.40.1490.10 4 133 2.2E-42 T 28-03-2018 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 CO704_RS09855 eebefc6e4bc9d1c417aaced732692bc0 215 Pfam PF01914 MarC family integral membrane protein 10 210 3.2E-73 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS09855 eebefc6e4bc9d1c417aaced732692bc0 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 2.3E-80 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CO704_RS05375 96da73dcc7c6820b4041c1d6e65b0b37 52 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.3E-23 T 28-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related CO704_RS12240 b2d10df45dab14f4919af909f64d48bc 208 Pfam PF11363 Protein of unknown function (DUF3164) 14 206 1.9E-76 T 28-03-2018 IPR021505 Bacteriophage B3, Orf6 CO704_RS04675 5cd6e509adb9be7e82b8c010b8f424b8 379 Pfam PF11863 Protein of unknown function (DUF3383) 91 377 1.5E-110 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 CO704_RS04675 5cd6e509adb9be7e82b8c010b8f424b8 379 Pfam PF11863 Protein of unknown function (DUF3383) 7 92 1.9E-27 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 CO704_RS09555 c8eb18d96111d8cbbe3a0a3f16b624c8 99 Pfam PF05488 PAAR motif 24 88 2.5E-23 T 28-03-2018 IPR008727 PAAR motif CO704_RS17740 f1005bda72466371a6b861ac0d3fff6e 99 Pfam PF05488 PAAR motif 25 90 1.3E-22 T 28-03-2018 IPR008727 PAAR motif CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 Pfam PF00648 Calpain family cysteine protease 64 311 1.8E-35 T 28-03-2018 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 SMART SM00230 26 328 3.3E-11 T 28-03-2018 IPR001300 Peptidase C2, calpain, catalytic domain GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 Gene3D G3DSA:3.90.70.10 190 315 3.3E-14 T 28-03-2018 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 SUPERFAMILY SSF54001 10 311 8.99E-47 T 28-03-2018 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 PRINTS PR00704 Calpain cysteine protease (C2) family signature 302 323 9.9E-6 T 28-03-2018 IPR022684 Peptidase C2, calpain family GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 PRINTS PR00704 Calpain cysteine protease (C2) family signature 87 103 9.9E-6 T 28-03-2018 IPR022684 Peptidase C2, calpain family GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 CO704_RS24945 f8dfced5c5d39c275b2929aaaab30aec 344 PRINTS PR00704 Calpain cysteine protease (C2) family signature 149 172 9.9E-6 T 28-03-2018 IPR022684 Peptidase C2, calpain family GO:0004198|GO:0005622|GO:0006508 Reactome: R-HSA-1474228 CO704_RS15190 d1f1dd6450586f8a771c483213ccb9bf 471 Pfam PF03389 MobA/MobL family 19 197 1.5E-53 T 28-03-2018 IPR005053 MobA/MobL protein CO704_RS04590 e49947e95a546ceb2b667c8d078a207b 160 PIRSF PIRSF004923 1 151 8.3E-40 T 28-03-2018 IPR026268 Protein RseC CO704_RS04590 e49947e95a546ceb2b667c8d078a207b 160 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 7.7E-31 T 28-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CO704_RS25245 e6532932bb063b69402f0a9b707c9f14 246 Pfam PF06629 MltA-interacting protein MipA 30 246 2.7E-37 T 28-03-2018 IPR010583 MltA-interacting MipA CO704_RS07765 879b90dbef92c68cdc77b9b767540a9d 124 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 3.0E-19 T 28-03-2018 IPR009241 Toxin HigB-like CO704_RS16320 5f4ff2469e549b7d28e3f3c7e0688696 155 SUPERFAMILY SSF54427 2 155 2.68E-78 T 28-03-2018 IPR032710 NTF2-like domain CO704_RS16320 5f4ff2469e549b7d28e3f3c7e0688696 155 Pfam PF07080 Protein of unknown function (DUF1348) 8 136 6.7E-65 T 28-03-2018 IPR009783 Protein of unknown function DUF1348 CO704_RS16320 5f4ff2469e549b7d28e3f3c7e0688696 155 Gene3D G3DSA:3.10.450.50 11 155 6.5E-68 T 28-03-2018 CO704_RS02475 f62d2b6b9f94027c921ad5997b433eda 193 Gene3D G3DSA:3.40.50.360 1 193 3.7E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS02475 f62d2b6b9f94027c921ad5997b433eda 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.0E-36 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS02475 f62d2b6b9f94027c921ad5997b433eda 193 SUPERFAMILY SSF52218 1 192 2.39E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS17080 d5eda255592e9177b469b0b562894174 468 Gene3D G3DSA:2.40.160.10 2 468 4.6E-93 T 28-03-2018 CO704_RS17080 d5eda255592e9177b469b0b562894174 468 Pfam PF03573 outer membrane porin, OprD family 33 432 4.4E-23 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CO704_RS14860 8f029466b55518de86ff39b9fa5e2e1e 162 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 8.5E-38 T 28-03-2018 IPR009476 Protein of unknown function DUF1097 CO704_RS00270 5028f76dff68e48444e66702372d7af3 545 Gene3D G3DSA:1.20.58.60 285 544 0.43 T 28-03-2018 CO704_RS18210 f36e55eebca0ae3e16760768e06bed9b 503 PIRSF PIRSF002457 8 503 2.5E-133 T 28-03-2018 IPR030676 Citrate carrier CitT-related CO704_RS18210 f36e55eebca0ae3e16760768e06bed9b 503 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 502 2.8E-149 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CO704_RS18210 f36e55eebca0ae3e16760768e06bed9b 503 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 498 6.3E-148 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CO704_RS14500 be43535cc42d333921420d655ec6b888 127 Pfam PF07233 Protein of unknown function (DUF1425) 32 121 2.5E-26 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 CO704_RS09695 c89ec21a1e280d6e361d804079563fa0 367 Pfam PF01699 Sodium/calcium exchanger protein 224 365 2.3E-8 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CO704_RS09695 c89ec21a1e280d6e361d804079563fa0 367 Pfam PF01699 Sodium/calcium exchanger protein 41 191 1.5E-14 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CO704_RS09695 c89ec21a1e280d6e361d804079563fa0 367 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 4 366 1.1E-115 T 28-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CO704_RS19045 536e7b3bf1de20f1cf04dc1c8d3fdeb7 245 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 211 2.7E-8 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CO704_RS19045 536e7b3bf1de20f1cf04dc1c8d3fdeb7 245 Gene3D G3DSA:3.40.50.1860 108 205 4.9E-11 T 28-03-2018 CO704_RS19045 536e7b3bf1de20f1cf04dc1c8d3fdeb7 245 Gene3D G3DSA:3.40.50.1860 7 107 6.7E-5 T 28-03-2018 CO704_RS02350 dd9597d8bf751dec2cf0910bf78dd8d8 181 SUPERFAMILY SSF49401 29 180 4.92E-29 T 28-03-2018 IPR008966 Adhesion domain CO704_RS02350 dd9597d8bf751dec2cf0910bf78dd8d8 181 Gene3D G3DSA:2.60.40.1090 28 181 2.0E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CO704_RS13760 78fe63e3c023bc41f9ae176b455af3d8 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 452 8.0E-153 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 CO704_RS13760 78fe63e3c023bc41f9ae176b455af3d8 481 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 468 44.857 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 CO704_RS02255 7309076482b65f2c0272eff8af162bbc 174 Pfam PF11937 Protein of unknown function (DUF3455) 32 173 4.2E-26 T 28-03-2018 IPR021851 Protein of unknown function DUF3455 CO704_RS23675 c6cc89ff73dccb7bf8798b06de187136 169 Pfam PF07813 LTXXQ motif family protein 44 138 2.1E-19 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CO704_RS23675 c6cc89ff73dccb7bf8798b06de187136 169 PIRSF PIRSF034445 1 147 2.7E-29 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CO704_RS04730 82cae5259178177150ba9160448d0ebc 399 Pfam PF04865 Baseplate J-like protein 86 342 2.3E-15 T 28-03-2018 IPR006949 Baseplate protein J-like CO704_RS18810 8434e55e94d560e03d6a00a794de3df9 877 Pfam PF17271 TcfC Usher-like barrel domain 331 746 1.8E-108 T 28-03-2018 IPR035224 TcfC, Usher-like barrel domain CO704_RS18810 8434e55e94d560e03d6a00a794de3df9 877 Pfam PF15976 CS1-pili formation C-terminal 752 843 4.0E-16 T 28-03-2018 IPR031917 Pilus assembly protein, C-terminal domain CO704_RS18810 8434e55e94d560e03d6a00a794de3df9 877 Pfam PF16967 E-set like domain 254 318 5.4E-24 T 28-03-2018 IPR032636 Pilus assembly protein, E-set like domain CO704_RS13495 d22f7aee80a2dfd824719f09a6655473 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 1.1E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 CO704_RS18440 9a1cf58458f32c9042f858b47cf6c571 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 8.0E-130 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CO704_RS18440 9a1cf58458f32c9042f858b47cf6c571 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 43.456 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CO704_RS23770 1f783bd6dca49f0168bc53c620632d94 460 Pfam PF04932 O-Antigen ligase 214 389 7.7E-8 T 28-03-2018 IPR007016 O-antigen ligase-related CO704_RS09405 304fbc46f2d2c782524c85c94e2caa39 214 SUPERFAMILY SSF161098 11 196 9.03E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09405 304fbc46f2d2c782524c85c94e2caa39 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 205 4.5E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS09405 304fbc46f2d2c782524c85c94e2caa39 214 Gene3D G3DSA:1.10.3720.10 1 212 2.3E-27 T 28-03-2018 CO704_RS18515 5a022e7ca8fb038961310059d2c575cb 360 Pfam PF07759 Protein of unknown function (DUF1615) 46 360 7.0E-142 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 CO704_RS18515 5a022e7ca8fb038961310059d2c575cb 360 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 7 360 1.0E-150 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 CO704_RS22195 df011c624c3f849588c063a743c5be76 142 Hamap MF_00546 Acid shock protein [asr]. 1 142 18.987 T 28-03-2018 IPR023497 Acid shock protein CO704_RS12615 a141dafc586bf6f61a7c720fa84ce7c6 208 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 6 208 42.034 T 28-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CO704_RS12615 a141dafc586bf6f61a7c720fa84ce7c6 208 PIRSF PIRSF004690 1 208 1.4E-64 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CO704_RS12615 a141dafc586bf6f61a7c720fa84ce7c6 208 Gene3D G3DSA:1.10.3480.10 1 207 1.3E-49 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS12615 a141dafc586bf6f61a7c720fa84ce7c6 208 SUPERFAMILY SSF89155 7 202 1.31E-50 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS12615 a141dafc586bf6f61a7c720fa84ce7c6 208 Pfam PF02613 Nitrate reductase delta subunit 63 165 1.2E-23 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CO704_RS04645 37640fdcef504a6aea6be820b3b5a0a8 111 Pfam PF11438 36-mer N-terminal peptide of the N protein (N36) 2 35 9.0E-15 T 28-03-2018 IPR020952 Antitermination protein N, arginine-rich motif CO704_RS18490 b944124df85b08c5ee902f700f5fe0c0 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 2.8E-28 T 28-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CO704_RS12885 b52aea51bc369558333f4f37eaf331bf 162 Pfam PF04449 CS1 type fimbrial major subunit 29 156 4.9E-9 T 28-03-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 CO704_RS02165 1a114e89041437deb7716e63f33fa944 215 Pfam PF11726 Inovirus Gp2 20 213 3.7E-51 T 28-03-2018 CO704_RS06160 b3c3228e47dd1e3cb1c0b521585e03d2 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.0E-59 T 28-03-2018 IPR018636 Protein of unknown function DUF2058 CO704_RS11565 f81faf6ba96324d05a4c4093e2d82fb0 242 Pfam PF06788 Uncharacterised protein family (UPF0257) 7 242 2.5E-21 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS11565 f81faf6ba96324d05a4c4093e2d82fb0 242 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 8 221 3.0E-6 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS11565 f81faf6ba96324d05a4c4093e2d82fb0 242 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 1 242 31.425 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CO704_RS18240 c078963469230d2feba2b5aa273d7667 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 8.0E-19 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CO704_RS18240 c078963469230d2feba2b5aa273d7667 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 3.3E-38 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CO704_RS22185 9f0716891bb6257cda889745da9dc3d0 290 Gene3D G3DSA:3.40.50.300 1 283 2.4E-30 T 28-03-2018 CO704_RS22185 9f0716891bb6257cda889745da9dc3d0 290 Pfam PF13614 AAA domain 1 146 1.1E-16 T 28-03-2018 IPR025669 AAA domain CO704_RS22185 9f0716891bb6257cda889745da9dc3d0 290 SUPERFAMILY SSF52540 1 276 1.04E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CO704_RS15800 d48f07e8f9a9e431d142bf31704ba8e1 174 Pfam PF12883 Protein of unknown function (DUF3828) 39 157 6.5E-20 T 28-03-2018 IPR024289 Domain of unknown function DUF3828 CO704_RS14200 55be675b644798679686f6aa416e345e 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 1.4E-17 T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CO704_RS14200 55be675b644798679686f6aa416e345e 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CO704_RS18480 3ad49a680d60c41cce11bd6d1856ff45 103 Pfam PF07769 psiF repeat 69 101 1.8E-18 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CO704_RS18480 3ad49a680d60c41cce11bd6d1856ff45 103 Pfam PF07769 psiF repeat 25 57 1.5E-16 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CO704_RS23645 6565b1691e711a98e948f03de43155cd 199 Pfam PF07305 Protein of unknown function (DUF1454) 9 193 1.0E-82 T 28-03-2018 IPR009918 Protein of unknown function DUF1454 CO704_RS21400 1b2aecc5314aea53464e04ce0b16b843 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 1.8E-33 T 28-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CO704_RS20700 b036179bd5d0e317147e7fc2f0b8130c 96 Pfam PF13997 YqjK-like protein 13 85 1.3E-29 T 28-03-2018 IPR025612 YqjK-like protein CO704_RS19155 83cd15201f9879f8ac0184fa8c471c51 217 Gene3D G3DSA:1.10.3720.10 1 217 1.1E-37 T 28-03-2018 CO704_RS19155 83cd15201f9879f8ac0184fa8c471c51 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 2.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS19155 83cd15201f9879f8ac0184fa8c471c51 217 SUPERFAMILY SSF161098 9 201 6.67E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CO704_RS18710 e9e2cd685d3e43aced231fb3f2d5e593 372 PIRSF PIRSF016636 1 370 2.2E-72 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CO704_RS04185 f05e71631ea145c7ff9a4636c6832d71 145 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 1 43 3.0E-4 T 28-03-2018 CO704_RS01920 c969039bde632d8156088d3b6af32eed 176 Pfam PF02525 Flavodoxin-like fold 2 168 6.8E-40 T 28-03-2018 IPR003680 Flavodoxin-like fold CO704_RS01920 c969039bde632d8156088d3b6af32eed 176 Gene3D G3DSA:3.40.50.360 1 175 4.9E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS01920 c969039bde632d8156088d3b6af32eed 176 SUPERFAMILY SSF52218 1 174 5.82E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain CO704_RS01600 8d136c060328691e870f6b43e182d5aa 422 Pfam PF02447 GntP family permease 8 415 4.0E-25 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CO704_RS25755 315a47df82e6de1309472d78d6bee910 74 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 6 67 1.1E-15 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CO704_RS04660 dea695dca6fbbbf23bfbd7458ea68844 152 Pfam PF03245 Bacteriophage Rz lysis protein 31 149 4.0E-39 T 28-03-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 CO704_RS21225 3f53438dc70512e0890daef58baa8e8f 107 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 100 9.8E-24 T 28-03-2018 IPR009241 Toxin HigB-like CO704_RS20730 26104ee1e56dd725e52a02a43a9399c9 165 Pfam PF10754 Protein of unknown function (DUF2569) 27 164 2.6E-30 T 28-03-2018 IPR019690 Protein of unknown function DUF2569 CO704_RS00895 8d362e1a71327fddb564ee15ed1ede11 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 1.6E-47 T 28-03-2018 IPR021238 Protein of unknown function DUF2620 CO704_RS05635 d8bdd62dc9a2cc90ecb820d4e1eb627a 358 Pfam PF01594 AI-2E family transporter 20 345 3.4E-82 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CO704_RS14770 2333a31b99ffb833ff3b02e2da74664c 124 Pfam PF13984 MsyB protein 3 124 2.3E-62 T 28-03-2018 IPR025729 MsyB protein CO704_RS24440 7d618bdfa2bbeb3fa258b9c0af1b301f 155 Pfam PF03500 Cellulose synthase subunit D 39 130 3.4E-11 T 28-03-2018 IPR022798 Cellulose synthase subunit D, bacterial CO704_RS06330 73e83c0232c9eb60d5074241fe801c87 334 PIRSF PIRSF020588 1 334 4.3E-163 T 28-03-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 CO704_RS07515 24230d64ff73ad478fd13bca328e12bf 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 322 6.3E-67 T 28-03-2018 CO704_RS06080 d2ea6ec320766b68f986d8c0f405a53a 82 Pfam PF10387 Protein of unknown function (DUF2442) 9 71 3.9E-19 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 CO704_RS17755 f6cb124d68f053ba0bb47b47518d8037 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 445 2.7E-83 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS17755 f6cb124d68f053ba0bb47b47518d8037 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 445 8.2E-83 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CO704_RS25840 bc5391b57716238e6956e7b181426248 216 Gene3D G3DSA:1.10.10.10 33 110 1.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CO704_RS25065 789b06c942b4b758568e6153c760f9d4 156 Pfam PF13005 zinc-finger binding domain of transposase IS66 68 106 4.0E-8 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CO704_RS10940 f725a51474aee6dba53d68bff79915fd 219 Pfam PF07077 Protein of unknown function (DUF1345) 37 209 4.3E-53 T 28-03-2018 IPR009781 Protein of unknown function DUF1345 CO704_RS10940 f725a51474aee6dba53d68bff79915fd 219 Gene3D G3DSA:1.10.287.70 70 215 3.5E-4 T 28-03-2018 CO704_RS18095 2e57855bfef17fec294aef2166e2504a 190 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 48 150 4.4E-40 T 28-03-2018 CO704_RS02780 7db8e983a6d0ae973fb1d7e5275bc4db 184 Pfam PF02325 YGGT family 108 171 2.5E-18 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 CO704_RS02780 7db8e983a6d0ae973fb1d7e5275bc4db 184 Pfam PF02325 YGGT family 10 76 6.8E-22 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 CO704_RS05385 2f9ef866de4c67b2c3064dfdc7e9c18e 125 PIRSF PIRSF016789 2 123 3.1E-47 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CO704_RS05385 2f9ef866de4c67b2c3064dfdc7e9c18e 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.3E-39 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CO704_RS21200 8d8e94527cde84cb7073fab89fab4749 213 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 5.6E-117 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 CO704_RS21200 8d8e94527cde84cb7073fab89fab4749 213 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 3.2E-106 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 CO704_RS04210 f464ff420471b4c03777a9dc8d212476 152 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 1 149 2.0E-37 T 28-03-2018 CO704_RS12155 b551ec4ea2ae19a49838fd371c721e17 412 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 105 2.3E-18 T 28-03-2018 IPR010657 ImpA, N-terminal CO704_RS12155 b551ec4ea2ae19a49838fd371c721e17 412 Pfam PF12486 Type VI secretion system, EvfB, or VasL 268 406 9.1E-36 T 28-03-2018 IPR021069 ImpA, C-terminal CO704_RS03770 50bf41651ddeff84d9ae504bfea6f063 346 Pfam PF03741 Integral membrane protein TerC family 73 299 4.8E-43 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CO704_RS03770 50bf41651ddeff84d9ae504bfea6f063 346 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 4.5E-105 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CO704_RS03895 7522bbfd5ca50b716e6cb95c7d8aeb42 142 Pfam PF09335 SNARE associated Golgi protein 25 133 3.3E-8 T 28-03-2018 IPR032816 SNARE associated Golgi protein CO704_RS14835 56e9359d329f22a3331c158c9efed9af 150 Pfam PF07012 Curlin associated repeat 98 129 4.7E-8 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CO704_RS14835 56e9359d329f22a3331c158c9efed9af 150 Pfam PF07012 Curlin associated repeat 74 105 4.1E-9 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CO704_RS14835 56e9359d329f22a3331c158c9efed9af 150 Pfam PF07012 Curlin associated repeat 69 96 1.4E-5 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CO704_RS10125 e539ced83a8e0d3e243b91ef9ad54624 628 Pfam PF10145 Phage-related minor tail protein 246 434 1.1E-11 T 28-03-2018 IPR010090 Phage tail tape measure protein CO704_RS12400 e539ced83a8e0d3e243b91ef9ad54624 628 Pfam PF10145 Phage-related minor tail protein 246 434 1.1E-11 T 28-03-2018 IPR010090 Phage tail tape measure protein CO704_RS18015 d7008a32d9a9e1a28f9da84e0562597d 65 Pfam PF04328 Selenoprotein, putative 5 65 1.2E-29 T 28-03-2018 IPR007423 Selenoprotein, putative CO704_RS10540 f2bc9e6cbadd9084c91fd63522a70bc2 109 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 97 1.2E-4 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CO704_RS08560 33e7144dad0da7fc20541e2be7293c38 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 7.7E-40 T 28-03-2018 CO704_RS15180 1903ebd2f886969947c48b13a3e4eb1a 93 Pfam PF06412 Conjugal transfer protein TraD 26 85 9.8E-15 T 28-03-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 CO704_RS17785 1ddbe89a3677656d6e779a879101a11c 175 SUPERFAMILY SSF49401 37 143 1.16E-16 T 28-03-2018 IPR008966 Adhesion domain CO704_RS14240 0a504e8a7cf4a56387090fbee99a8494 350 Pfam PF13391 HNH endonuclease 251 299 1.8E-4 T 28-03-2018 IPR003615 HNH nuclease CO704_RS10220 427321216a375efc9ce113e9bd65d6a5 146 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 57 88 7.9E-13 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CO704_RS21585 fc74af4d9fa8ac8e00f753347463c8e6 61 Gene3D G3DSA:3.10.100.10 2 48 1.1E-7 T 28-03-2018 IPR016186 C-type lectin-like/link domain CO704_RS10400 528e934f409176828505cc78f56f869c 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 1.6E-19 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CO704_RS09250 7ffac92493c97af58b18ac88daeafb64 79 Pfam PF03891 Domain of unknown function (DUF333) 31 77 3.1E-19 T 28-03-2018 IPR005590 Protein of unknown function DUF333 CO704_RS25575 1192f738bded2332a0293575edbe1d82 163 Pfam PF15941 FidL-like putative membrane protein 77 159 2.2E-7 T 28-03-2018 IPR031854 Putative membrane protein FidL-like CO704_RS13475 2b9a11b4b218e49a01c4a5b9fdef8bc5 78 Pfam PF07869 Protein of unknown function (DUF1656) 18 69 3.1E-16 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CO704_RS08360 c338ba46ee8bbd273f5eea7a63d11940 77 Pfam PF10733 Protein of unknown function (DUF2525) 18 77 9.9E-30 T 28-03-2018 IPR019669 Uncharacterised bacterial stress protein YodD CO704_RS11695 18611949fb4c3d04987d7e6cc3bf9534 40 Pfam PF10617 Protein of unknown function (DUF2474) 3 40 1.3E-16 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 CO704_RS05680 4cecb235cb6a0c6b7b7e60bc07b3eddc 62 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 1.0E-33 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 CO704_RS22305 64bcf1eb0816a7e1c445175d9adc6487 286 Pfam PF13990 YjcZ-like protein 16 285 1.7E-87 T 28-03-2018 IPR025599 YjcZ-like protein CO704_RS04850 f9e7b39fe726f7f4b2820dbcd3f6ee46 140 Pfam PF07681 DoxX 17 97 6.0E-17 T 28-03-2018 IPR032808 DoxX family CO704_RS03580 58d5227a1af074e9c9ef4ba34fca21d4 237 Pfam PF07670 Nucleoside recognition 86 176 9.2E-8 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CO704_RS18455 52f07672021f50cadb24b9136df39bec 63 Pfam PF16362 YaiA protein 1 63 1.1E-36 T 28-03-2018 IPR032303 YaiA protein CO704_RS13675 492d22dfe59c19185a69a7710f7e6960 274 Pfam PF02517 CAAX protease self-immunity 168 258 8.9E-19 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CO704_RS05350 f7cba2b9eea027a79c4bc38ca9cf1b26 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 2.6E-63 T 28-03-2018 IPR019693 Biofilm formation regulator YbaJ CO704_RS04180 d95f81d3cdafc45c7b3c251ffe78c019 278 Pfam PF13708 Domain of unknown function (DUF4942) 84 271 5.0E-59 T 28-03-2018 IPR031339 Domain of unknown function DUF4942 CO704_RS11720 9b7c66fa32fa7c16e6358dce718b413a 219 Pfam PF03591 AzlC protein 19 154 5.0E-29 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease CO704_RS06020 b6d48fac3b65b93aba1f182c886cdde0 413 Pfam PF01566 Natural resistance-associated macrophage protein 45 371 2.5E-16 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CO704_RS22500 847975d88bab09d09ecbd383b388d231 449 Pfam PF00860 Permease family 26 409 9.5E-88 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CO704_RS26030 5a46e480034f2be1f60a8defe7aea31b 103 Pfam PF09889 Uncharacterized protein containing a Zn-ribbon (DUF2116) 12 60 6.0E-5 T 28-03-2018 IPR019216 Protein of unknown function DUF2116, Zn-ribbon CO704_RS20950 2bbe1c0e27b47005575f8c06dc240b94 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 3.2E-20 T 28-03-2018 IPR019201 Protein of unknown function DUF2065 CO704_RS23430 3524d35684f1db0b8882079032428cfd 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 5.1E-19 T 28-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 CO704_RS04890 a59b509e44ccb3f53215e01d12091d38 326 Pfam PF03824 High-affinity nickel-transport protein 72 179 3.5E-24 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CO704_RS04890 a59b509e44ccb3f53215e01d12091d38 326 Pfam PF03824 High-affinity nickel-transport protein 196 316 1.2E-19 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CO704_RS24240 2a026cd02d0264644616f35f502b0306 151 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 8.5E-70 T 28-03-2018 IPR021285 Transcription regulator, HycA CO704_RS04735 cbbc5d9afdc3f3a7a4df4e5c453eb7b7 226 Pfam PF11041 Protein of unknown function (DUF2612) 4 185 7.1E-50 T 28-03-2018 IPR021283 Protein of unknown function DUF2612 CO704_RS01890 e545c3d95862d9a69f67e4ed6b80e1ce 347 Pfam PF03773 Predicted permease 72 344 8.3E-27 T 28-03-2018 IPR005524 Predicted permease DUF318 CO704_RS01890 e545c3d95862d9a69f67e4ed6b80e1ce 347 Pfam PF03773 Predicted permease 59 152 2.6E-11 T 28-03-2018 IPR005524 Predicted permease DUF318 CO704_RS05085 79bdf16f13fe5fd6c1753cd585987e6e 123 Pfam PF13788 Domain of unknown function (DUF4180) 10 118 8.4E-32 T 28-03-2018 IPR025438 Domain of unknown function DUF4180 CO704_RS08640 822fa72321bfddaac0fa42930f8a297a 113 Pfam PF13992 YecR-like lipoprotein 28 98 4.0E-24 T 28-03-2018 IPR025731 YecR-like lipoprotein CO704_RS08630 47d6ee5546599610716f7e362436bbdb 145 Pfam PF12098 Protein of unknown function (DUF3574) 44 145 7.6E-36 T 28-03-2018 IPR021957 Protein of unknown function DUF3574 CO704_RS08990 860ba6958ef25ac3a1b515f134ea9fbb 291 Pfam PF05425 Copper resistance protein D 187 283 1.8E-21 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 CO704_RS25145 b2dab20f504fa1f4548d2a9dbd95bcfe 66 Gene3D G3DSA:3.90.180.10 1 64 1.5E-4 T 28-03-2018