locus-tag class description CFLA_RS00005 PF00308 Bacterial dnaA protein CFLA_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CFLA_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CFLA_RS00010 PF02767 DNA polymerase III beta subunit, central domain CFLA_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CFLA_RS00015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFLA_RS00015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFLA_RS00020 PF02463 RecF/RecN/SMC N terminal domain CFLA_RS00025 PF05258 Dna[CI] antecedent, DciA CFLA_RS00030 PF00204 DNA gyrase B CFLA_RS00030 PF01751 Toprim domain CFLA_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus CFLA_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CFLA_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CFLA_RS00040 PF12089 Transmembrane domain of unknown function (DUF3566) CFLA_RS00065 PF01139 tRNA-splicing ligase RtcB CFLA_RS00070 PF00313 'Cold-shock' DNA-binding domain CFLA_RS00080 PF13302 Acetyltransferase (GNAT) domain CFLA_RS00085 PF00553 Cellulose binding domain CFLA_RS00085 PF00942 Cellulose binding domain CFLA_RS00085 PF00041 Fibronectin type III domain CFLA_RS00085 PF00759 Glycosyl hydrolase family 9 CFLA_RS00095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFLA_RS00100 PF01694 Rhomboid family CFLA_RS00105 PF06781 Cell division protein CrgA CFLA_RS00115 PF04203 Sortase domain CFLA_RS00125 PF00117 Glutamine amidotransferase class-I CFLA_RS00130 PF03793 PASTA domain CFLA_RS00130 PF00069 Protein kinase domain CFLA_RS00140 PF00905 Penicillin binding protein transpeptidase domain CFLA_RS00145 PF01098 Cell cycle protein CFLA_RS00155 PF16697 Inner membrane component of T3SS, cytoplasmic domain CFLA_RS00190 PF01138 3' exoribonuclease family, domain 1 CFLA_RS00190 PF00575 S1 RNA binding domain CFLA_RS00190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFLA_RS00190 PF00013 KH domain CFLA_RS00245 PF08402 TOBE domain CFLA_RS00245 PF00005 ABC transporter CFLA_RS00270 PF05360 yiaA/B two helix domain CFLA_RS00275 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS00280 PF00005 ABC transporter CFLA_RS00280 PF12848 ABC transporter CFLA_RS00285 PF01205 Uncharacterized protein family UPF0029 CFLA_RS00285 PF09186 Domain of unknown function (DUF1949) CFLA_RS00295 PF08338 Domain of unknown function (DUF1731) CFLA_RS00295 PF01370 NAD dependent epimerase/dehydratase family CFLA_RS00305 PF02810 SEC-C motif CFLA_RS00380 PF00463 Isocitrate lyase family CFLA_RS00385 PF01274 Malate synthase CFLA_RS00390 PF00557 Metallopeptidase family M24 CFLA_RS00410 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS00420 PF00155 Aminotransferase class I and II CFLA_RS00425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CFLA_RS00425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CFLA_RS00435 PF03741 Integral membrane protein TerC family CFLA_RS00470 PF00331 Glycosyl hydrolase family 10 CFLA_RS00470 PF00756 Putative esterase CFLA_RS00475 PF02347 Glycine cleavage system P-protein CFLA_RS00480 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFLA_RS00480 PF01571 Aminomethyltransferase folate-binding domain CFLA_RS00485 PF01597 Glycine cleavage H-protein CFLA_RS00490 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS00490 PF00072 Response regulator receiver domain CFLA_RS00495 PF00293 NUDIX domain CFLA_RS00500 PF00011 Hsp20/alpha crystallin family CFLA_RS00505 PF00155 Aminotransferase class I and II CFLA_RS00515 PF00005 ABC transporter CFLA_RS00535 PF01717 Cobalamin-independent synthase, Catalytic domain CFLA_RS00535 PF08267 Cobalamin-independent synthase, N-terminal domain CFLA_RS00540 PF02219 Methylenetetrahydrofolate reductase CFLA_RS00550 PF03352 Methyladenine glycosylase CFLA_RS00575 PF00270 DEAD/DEAH box helicase CFLA_RS00575 PF11898 Domain of unknown function (DUF3418) CFLA_RS00575 PF04408 Helicase associated domain (HA2) CFLA_RS00575 PF00271 Helicase conserved C-terminal domain CFLA_RS00575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CFLA_RS00625 PF12320 Type 5 capsule protein repressor C-terminal domain CFLA_RS00625 PF00149 Calcineurin-like phosphoesterase CFLA_RS00630 PF13476 AAA domain CFLA_RS00660 PF13520 Amino acid permease CFLA_RS00680 PF00561 alpha/beta hydrolase fold CFLA_RS00695 PF00942 Cellulose binding domain CFLA_RS00695 PF00759 Glycosyl hydrolase family 9 CFLA_RS00700 PF07972 NrdI Flavodoxin like CFLA_RS00705 PF04389 Peptidase family M28 CFLA_RS00705 PF02225 PA domain CFLA_RS00710 PF01381 Helix-turn-helix CFLA_RS00720 PF13732 Domain of unknown function (DUF4162) CFLA_RS00720 PF00005 ABC transporter CFLA_RS00725 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CFLA_RS00725 PF00326 Prolyl oligopeptidase family CFLA_RS00725 PF07676 WD40-like Beta Propeller Repeat CFLA_RS00735 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) CFLA_RS00740 PF06165 Glycosyltransferase family 36 CFLA_RS00740 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CFLA_RS00775 PF13784 Fic/DOC family N-terminal CFLA_RS00775 PF02661 Fic/DOC family CFLA_RS00805 PF00830 Ribosomal L28 family CFLA_RS00810 PF00471 Ribosomal protein L33 CFLA_RS00815 PF00253 Ribosomal protein S14p/S29e CFLA_RS00820 PF00444 Ribosomal protein L36 CFLA_RS00825 PF01783 Ribosomal L32p protein family CFLA_RS00835 PF14403 Circularly permuted ATP-grasp type 2 CFLA_RS00835 PF04168 A predicted alpha-helical domain with a conserved ER motif. CFLA_RS00840 PF01841 Transglutaminase-like superfamily CFLA_RS00840 PF08379 Bacterial transglutaminase-like N-terminal region CFLA_RS00870 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CFLA_RS00870 PF18416 N-acetylglucosamine binding protein domain 2 CFLA_RS00875 PF00578 AhpC/TSA family CFLA_RS00875 PF02683 Cytochrome C biogenesis protein transmembrane region CFLA_RS00875 PF17991 Thioredoxin like C-terminal domain CFLA_RS00880 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS00885 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CFLA_RS00885 PF00553 Cellulose binding domain CFLA_RS00910 PF00293 NUDIX domain CFLA_RS00915 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS00925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFLA_RS00925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFLA_RS00930 PF02734 DAK2 domain CFLA_RS00930 PF02733 Dak1 domain CFLA_RS00935 PF02502 Ribose/Galactose Isomerase CFLA_RS00940 PF00893 Small Multidrug Resistance protein CFLA_RS00945 PF00664 ABC transporter transmembrane region CFLA_RS00945 PF00005 ABC transporter CFLA_RS00950 PF01047 MarR family CFLA_RS00970 PF04307 LexA-binding, inner membrane-associated putative hydrolase CFLA_RS00980 PF04542 Sigma-70 region 2 CFLA_RS00980 PF08281 Sigma-70, region 4 CFLA_RS00990 PF00282 Pyridoxal-dependent decarboxylase conserved domain CFLA_RS00995 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CFLA_RS01005 PF06276 Ferric iron reductase FhuF-like transporter CFLA_RS01005 PF04183 IucA / IucC family CFLA_RS01010 PF01804 Penicillin amidase CFLA_RS01030 PF04229 GrpB protein CFLA_RS01030 PF13673 Acetyltransferase (GNAT) domain CFLA_RS01045 PF13183 4Fe-4S dicluster domain CFLA_RS01045 PF02754 Cysteine-rich domain CFLA_RS01050 PF13244 Domain of unknown function (DUF4040) CFLA_RS01050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CFLA_RS01050 PF00361 Proton-conducting membrane transporter CFLA_RS01050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFLA_RS01055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFLA_RS01060 PF00361 Proton-conducting membrane transporter CFLA_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS01110 PF00005 ABC transporter CFLA_RS01110 PF08402 TOBE domain CFLA_RS01130 PF01566 Natural resistance-associated macrophage protein CFLA_RS01130 PF03358 NADPH-dependent FMN reductase CFLA_RS01135 PF08281 Sigma-70, region 4 CFLA_RS01135 PF04542 Sigma-70 region 2 CFLA_RS01140 PF03795 YCII-related domain CFLA_RS01145 PF03795 YCII-related domain CFLA_RS01150 PF01965 DJ-1/PfpI family CFLA_RS01175 PF04978 Protein of unknown function (DUF664) CFLA_RS01190 PF03707 Bacterial signalling protein N terminal repeat CFLA_RS01190 PF00563 EAL domain CFLA_RS01190 PF13188 PAS domain CFLA_RS01190 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS01210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFLA_RS01215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFLA_RS01225 PF04299 Putative FMN-binding domain CFLA_RS01230 PF01522 Polysaccharide deacetylase CFLA_RS01230 PF00457 Glycosyl hydrolases family 11 CFLA_RS01235 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS01235 PF00331 Glycosyl hydrolase family 10 CFLA_RS01240 PF00457 Glycosyl hydrolases family 11 CFLA_RS01240 PF01522 Polysaccharide deacetylase CFLA_RS01245 PF00457 Glycosyl hydrolases family 11 CFLA_RS01270 PF13732 Domain of unknown function (DUF4162) CFLA_RS01270 PF00005 ABC transporter CFLA_RS01305 PF03632 Glycosyl hydrolase family 65 central catalytic domain CFLA_RS01305 PF03636 Glycosyl hydrolase family 65, N-terminal domain CFLA_RS01305 PF03633 Glycosyl hydrolase family 65, C-terminal domain CFLA_RS01325 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS01370 PF00106 short chain dehydrogenase CFLA_RS01405 PF07730 Histidine kinase CFLA_RS01410 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS01410 PF00072 Response regulator receiver domain CFLA_RS01420 PF07883 Cupin domain CFLA_RS01425 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFLA_RS01440 PF01569 PAP2 superfamily CFLA_RS01445 PF00005 ABC transporter CFLA_RS01450 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS01455 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS01470 PF00501 AMP-binding enzyme CFLA_RS01470 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS01475 PF02803 Thiolase, C-terminal domain CFLA_RS01475 PF00108 Thiolase, N-terminal domain CFLA_RS01480 PF01575 MaoC like domain CFLA_RS01495 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFLA_RS01500 PF13380 CoA binding domain CFLA_RS01500 PF13607 Succinyl-CoA ligase like flavodoxin domain CFLA_RS01505 PF01494 FAD binding domain CFLA_RS01510 PF01494 FAD binding domain CFLA_RS01535 PF00248 Aldo/keto reductase family CFLA_RS01555 PF01494 FAD binding domain CFLA_RS01575 PF01042 Endoribonuclease L-PSP CFLA_RS01580 PF00313 'Cold-shock' DNA-binding domain CFLA_RS01590 PF12464 Maltose acetyltransferase CFLA_RS01590 PF14602 Hexapeptide repeat of succinyl-transferase CFLA_RS01600 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CFLA_RS01610 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS01620 PF01037 Lrp/AsnC ligand binding domain CFLA_RS01650 PF00561 alpha/beta hydrolase fold CFLA_RS01655 PF01230 HIT domain CFLA_RS01665 PF12833 Helix-turn-helix domain CFLA_RS01665 PF06445 GyrI-like small molecule binding domain CFLA_RS01695 PF16925 Tetracyclin repressor-like, C-terminal domain CFLA_RS01695 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS01700 PF01209 ubiE/COQ5 methyltransferase family CFLA_RS01705 PF13443 Cro/C1-type HTH DNA-binding domain CFLA_RS01710 PF00331 Glycosyl hydrolase family 10 CFLA_RS01710 PF00553 Cellulose binding domain CFLA_RS01725 PF01471 Putative peptidoglycan binding domain CFLA_RS01725 PF04717 Type VI secretion system, phage-baseplate injector CFLA_RS01735 PF00067 Cytochrome P450 CFLA_RS01750 PF13401 AAA domain CFLA_RS01760 PF00239 Resolvase, N terminal domain CFLA_RS01760 PF02796 Helix-turn-helix domain of resolvase CFLA_RS01765 PF01022 Bacterial regulatory protein, arsR family CFLA_RS01785 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS01785 PF00672 HAMP domain CFLA_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS01800 PF00578 AhpC/TSA family CFLA_RS01835 PF02583 Metal-sensitive transcriptional repressor CFLA_RS01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS01840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFLA_RS01875 PF01638 HxlR-like helix-turn-helix CFLA_RS01880 PF01699 Sodium/calcium exchanger protein CFLA_RS01885 PF01209 ubiE/COQ5 methyltransferase family CFLA_RS01895 PF00723 Glycosyl hydrolases family 15 CFLA_RS01900 PF00331 Glycosyl hydrolase family 10 CFLA_RS01900 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS01905 PF00535 Glycosyl transferase family 2 CFLA_RS01915 PF06445 GyrI-like small molecule binding domain CFLA_RS01915 PF13411 MerR HTH family regulatory protein CFLA_RS01935 PF01022 Bacterial regulatory protein, arsR family CFLA_RS01950 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS01955 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS01960 PF01758 Sodium Bile acid symporter family CFLA_RS01965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFLA_RS01965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFLA_RS01985 PF01565 FAD binding domain CFLA_RS01985 PF08031 Berberine and berberine like CFLA_RS01990 PF08281 Sigma-70, region 4 CFLA_RS01990 PF04542 Sigma-70 region 2 CFLA_RS01990 PF12680 SnoaL-like domain CFLA_RS01995 PF00355 Rieske [2Fe-2S] domain CFLA_RS02000 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFLA_RS02000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS02000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFLA_RS02000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFLA_RS02000 PF04324 BFD-like [2Fe-2S] binding domain CFLA_RS02005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFLA_RS02005 PF00384 Molybdopterin oxidoreductase CFLA_RS02005 PF01568 Molydopterin dinucleotide binding domain CFLA_RS02030 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS02120 PF13411 MerR HTH family regulatory protein CFLA_RS02130 PF01022 Bacterial regulatory protein, arsR family CFLA_RS02145 PF01545 Cation efflux family CFLA_RS02155 PF01037 Lrp/AsnC ligand binding domain CFLA_RS02175 PF00485 Phosphoribulokinase / Uridine kinase family CFLA_RS02185 PF10706 Aminoglycoside-2''-adenylyltransferase CFLA_RS02205 PF13538 UvrD-like helicase C-terminal domain CFLA_RS02210 PF00665 Integrase core domain CFLA_RS02210 PF13936 Helix-turn-helix domain CFLA_RS02215 PF00012 Hsp70 protein CFLA_RS02220 PF01025 GrpE CFLA_RS02225 PF01556 DnaJ C terminal domain CFLA_RS02225 PF00226 DnaJ domain CFLA_RS02225 PF00684 DnaJ central domain CFLA_RS02230 PF13411 MerR HTH family regulatory protein CFLA_RS02235 PF01434 Peptidase family M41 CFLA_RS02235 PF17862 AAA+ lid domain CFLA_RS02235 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS02250 PF07972 NrdI Flavodoxin like CFLA_RS02255 PF08343 Ribonucleotide reductase N-terminal CFLA_RS02255 PF02867 Ribonucleotide reductase, barrel domain CFLA_RS02255 PF00317 Ribonucleotide reductase, all-alpha domain CFLA_RS02265 PF00268 Ribonucleotide reductase, small chain CFLA_RS02285 PF00581 Rhodanese-like domain CFLA_RS02290 PF03422 Carbohydrate binding module (family 6) CFLA_RS02290 PF04616 Glycosyl hydrolases family 43 CFLA_RS02295 PF16499 Alpha galactosidase A CFLA_RS02295 PF17801 Alpha galactosidase C-terminal beta sandwich domain CFLA_RS02310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CFLA_RS02310 PF00391 PEP-utilising enzyme, mobile domain CFLA_RS02310 PF02896 PEP-utilising enzyme, TIM barrel domain CFLA_RS02325 PF01790 Prolipoprotein diacylglyceryl transferase CFLA_RS02345 PF03358 NADPH-dependent FMN reductase CFLA_RS02360 PF01022 Bacterial regulatory protein, arsR family CFLA_RS02365 PF01740 STAS domain CFLA_RS02365 PF00916 Sulfate permease family CFLA_RS02375 PF04542 Sigma-70 region 2 CFLA_RS02375 PF04545 Sigma-70, region 4 CFLA_RS02390 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CFLA_RS02390 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CFLA_RS02425 PF14437 MafB19-like deaminase CFLA_RS02430 PF02146 Sir2 family CFLA_RS02440 PF03009 Glycerophosphoryl diester phosphodiesterase family CFLA_RS02460 PF13538 UvrD-like helicase C-terminal domain CFLA_RS02465 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CFLA_RS02475 PF00581 Rhodanese-like domain CFLA_RS02475 PF00899 ThiF family CFLA_RS02480 PF05690 Thiazole biosynthesis protein ThiG CFLA_RS02490 PF05690 Thiazole biosynthesis protein ThiG CFLA_RS02490 PF01266 FAD dependent oxidoreductase CFLA_RS02495 PF02581 Thiamine monophosphate synthase CFLA_RS02505 PF00986 DNA gyrase B subunit, carboxyl terminus CFLA_RS02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS02505 PF00204 DNA gyrase B CFLA_RS02505 PF01751 Toprim domain CFLA_RS02510 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS02515 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS02520 PF01547 Bacterial extracellular solute-binding protein CFLA_RS02525 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS02525 PF00498 FHA domain CFLA_RS02525 PF03704 Bacterial transcriptional activator domain CFLA_RS02530 PF00561 alpha/beta hydrolase fold CFLA_RS02535 PF00144 Beta-lactamase CFLA_RS02550 PF08241 Methyltransferase domain CFLA_RS02555 PF05726 Pirin C-terminal cupin domain CFLA_RS02555 PF02678 Pirin CFLA_RS02570 PF02585 GlcNAc-PI de-N-acetylase CFLA_RS02580 PF01494 FAD binding domain CFLA_RS02585 PF00293 NUDIX domain CFLA_RS02625 PF07691 PA14 domain CFLA_RS02625 PF12791 Anti-sigma factor N-terminus CFLA_RS02655 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS02655 PF08448 PAS fold CFLA_RS02655 PF13188 PAS domain CFLA_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS02655 PF00072 Response regulator receiver domain CFLA_RS02670 PF01757 Acyltransferase family CFLA_RS02675 PF01820 D-ala D-ala ligase N-terminus CFLA_RS02675 PF07478 D-ala D-ala ligase C-terminus CFLA_RS02680 PF00842 Alanine racemase, C-terminal domain CFLA_RS02680 PF01168 Alanine racemase, N-terminal domain CFLA_RS02690 PF00465 Iron-containing alcohol dehydrogenase CFLA_RS02705 PF00005 ABC transporter CFLA_RS02705 PF13732 Domain of unknown function (DUF4162) CFLA_RS02710 PF01061 ABC-2 type transporter CFLA_RS02715 PF00343 Carbohydrate phosphorylase CFLA_RS02735 PF02390 Putative methyltransferase CFLA_RS02755 PF02861 Clp amino terminal domain, pathogenicity island component CFLA_RS02755 PF10431 C-terminal, D2-small domain, of ClpB protein CFLA_RS02755 PF17871 AAA lid domain CFLA_RS02755 PF07724 AAA domain (Cdc48 subfamily) CFLA_RS02755 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS02780 PF04616 Glycosyl hydrolases family 43 CFLA_RS02790 PF13823 Alcohol dehydrogenase GroES-associated CFLA_RS02790 PF00107 Zinc-binding dehydrogenase CFLA_RS02790 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS02820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFLA_RS02820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFLA_RS02825 PF00230 Major intrinsic protein CFLA_RS02830 PF01266 FAD dependent oxidoreductase CFLA_RS02830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFLA_RS02835 PF13936 Helix-turn-helix domain CFLA_RS02835 PF04198 Putative sugar-binding domain CFLA_RS02840 PF00583 Acetyltransferase (GNAT) family CFLA_RS02845 PF00633 Helix-hairpin-helix motif CFLA_RS02845 PF10576 Iron-sulfur binding domain of endonuclease III CFLA_RS02845 PF00730 HhH-GPD superfamily base excision DNA repair protein CFLA_RS02855 PF10635 DisA bacterial checkpoint controller linker region CFLA_RS02855 PF00633 Helix-hairpin-helix motif CFLA_RS02855 PF02457 DisA bacterial checkpoint controller nucleotide-binding CFLA_RS02860 PF18073 Rubredoxin metal binding domain CFLA_RS02860 PF06745 KaiC CFLA_RS02875 PF00072 Response regulator receiver domain CFLA_RS02875 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS02885 PF01751 Toprim domain CFLA_RS02885 PF13368 Topoisomerase C-terminal repeat CFLA_RS02885 PF01131 DNA topoisomerase CFLA_RS02900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFLA_RS02900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFLA_RS02905 PF02223 Thymidylate kinase CFLA_RS02910 PF12169 DNA polymerase III subunits gamma and tau domain III CFLA_RS02915 PF00561 alpha/beta hydrolase fold CFLA_RS02955 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS02955 PF01068 ATP dependent DNA ligase domain CFLA_RS02955 PF13298 DNA polymerase Ligase (LigD) CFLA_RS02985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFLA_RS02985 PF01367 5'-3' exonuclease, C-terminal SAM fold CFLA_RS03000 PF05922 Peptidase inhibitor I9 CFLA_RS03000 PF13860 FlgD Ig-like domain CFLA_RS03000 PF00082 Subtilase family CFLA_RS03000 PF02225 PA domain CFLA_RS03015 PF13191 AAA ATPase domain CFLA_RS03015 PF00211 Adenylate and Guanylate cyclase catalytic domain CFLA_RS03030 PF07664 Ferrous iron transport protein B C terminus CFLA_RS03030 PF17910 FeoB cytosolic helical domain CFLA_RS03030 PF07670 Nucleoside recognition CFLA_RS03030 PF02421 Ferrous iron transport protein B CFLA_RS03040 PF13183 4Fe-4S dicluster domain CFLA_RS03040 PF01565 FAD binding domain CFLA_RS03040 PF02913 FAD linked oxidases, C-terminal domain CFLA_RS03055 PF01910 Thiamine-binding protein CFLA_RS03070 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS03070 PF00107 Zinc-binding dehydrogenase CFLA_RS03080 PF00561 alpha/beta hydrolase fold CFLA_RS03085 PF01053 Cys/Met metabolism PLP-dependent enzyme CFLA_RS03100 PF00877 NlpC/P60 family CFLA_RS03125 PF02661 Fic/DOC family CFLA_RS03135 PF00719 Inorganic pyrophosphatase CFLA_RS03140 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CFLA_RS03150 PF09179 TilS substrate binding domain CFLA_RS03150 PF01171 PP-loop family CFLA_RS03155 PF00156 Phosphoribosyl transferase domain CFLA_RS03160 PF17862 AAA+ lid domain CFLA_RS03160 PF01434 Peptidase family M41 CFLA_RS03160 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS03165 PF01227 GTP cyclohydrolase I CFLA_RS03170 PF00809 Pterin binding enzyme CFLA_RS03175 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CFLA_RS03200 PF02569 Pantoate-beta-alanine ligase CFLA_RS03205 PF02261 Aspartate decarboxylase CFLA_RS03210 PF00890 FAD binding domain CFLA_RS03210 PF02910 Fumarate reductase flavoprotein C-term CFLA_RS03220 PF00331 Glycosyl hydrolase family 10 CFLA_RS03225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CFLA_RS03225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFLA_RS03230 PF01336 OB-fold nucleic acid binding domain CFLA_RS03230 PF00152 tRNA synthetases class II (D, K and N) CFLA_RS03235 PF11774 Lsr2 CFLA_RS03240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFLA_RS03240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFLA_RS03245 PF01261 Xylose isomerase-like TIM barrel CFLA_RS03255 PF10282 Lactonase, 7-bladed beta-propeller CFLA_RS03260 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS03260 PF00072 Response regulator receiver domain CFLA_RS03280 PF04542 Sigma-70 region 2 CFLA_RS03280 PF04545 Sigma-70, region 4 CFLA_RS03285 PF00534 Glycosyl transferases group 1 CFLA_RS03285 PF13439 Glycosyltransferase Family 4 CFLA_RS03290 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS03295 PF01895 PhoU domain CFLA_RS03300 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS03305 PF00072 Response regulator receiver domain CFLA_RS03305 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS03310 PF12849 PBP superfamily domain CFLA_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS03320 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS03325 PF00005 ABC transporter CFLA_RS03335 PF02559 CarD-like/TRCF domain CFLA_RS03340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFLA_RS03345 PF02542 YgbB family CFLA_RS03355 PF00107 Zinc-binding dehydrogenase CFLA_RS03355 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS03360 PF01565 FAD binding domain CFLA_RS03360 PF04030 D-arabinono-1,4-lactone oxidase CFLA_RS03365 PF13977 BetI-type transcriptional repressor, C-terminal CFLA_RS03365 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS03375 PF09190 DALR domain CFLA_RS03375 PF01406 tRNA synthetases class I (C) catalytic domain CFLA_RS03380 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFLA_RS03380 PF00588 SpoU rRNA Methylase family CFLA_RS03390 PF17912 MalK OB fold domain CFLA_RS03390 PF00005 ABC transporter CFLA_RS03395 PF02358 Trehalose-phosphatase CFLA_RS03400 PF00982 Glycosyltransferase family 20 CFLA_RS03405 PF00069 Protein kinase domain CFLA_RS03405 PF00400 WD domain, G-beta repeat CFLA_RS03435 PF01261 Xylose isomerase-like TIM barrel CFLA_RS03440 PF00072 Response regulator receiver domain CFLA_RS03440 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS03445 PF13492 GAF domain CFLA_RS03445 PF07730 Histidine kinase CFLA_RS03460 PF03167 Uracil DNA glycosylase superfamily CFLA_RS03480 PF00118 TCP-1/cpn60 chaperonin family CFLA_RS03490 PF00155 Aminotransferase class I and II CFLA_RS03510 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFLA_RS03520 PF01979 Amidohydrolase family CFLA_RS03520 PF00449 Urease alpha-subunit, N-terminal domain CFLA_RS03525 PF00699 Urease beta subunit CFLA_RS03530 PF00547 Urease, gamma subunit CFLA_RS03550 PF00005 ABC transporter CFLA_RS03550 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFLA_RS03555 PF00005 ABC transporter CFLA_RS03560 PF00392 Bacterial regulatory proteins, gntR family CFLA_RS03560 PF07729 FCD domain CFLA_RS03565 PF01757 Acyltransferase family CFLA_RS03575 PF00209 Sodium:neurotransmitter symporter family CFLA_RS03580 PF00364 Biotin-requiring enzyme CFLA_RS03580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFLA_RS03580 PF02785 Biotin carboxylase C-terminal domain CFLA_RS03580 PF00289 Biotin carboxylase, N-terminal domain CFLA_RS03585 PF01425 Amidase CFLA_RS03610 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS03610 PF00672 HAMP domain CFLA_RS03615 PF00072 Response regulator receiver domain CFLA_RS03615 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS03625 PF13545 Crp-like helix-turn-helix domain CFLA_RS03625 PF00027 Cyclic nucleotide-binding domain CFLA_RS03635 PF00403 Heavy-metal-associated domain CFLA_RS03655 PF04851 Type III restriction enzyme, res subunit CFLA_RS03655 PF00271 Helicase conserved C-terminal domain CFLA_RS03670 PF01546 Peptidase family M20/M25/M40 CFLA_RS03670 PF07687 Peptidase dimerisation domain CFLA_RS03675 PF02397 Bacterial sugar transferase CFLA_RS03725 PF00535 Glycosyl transferase family 2 CFLA_RS03730 PF07859 alpha/beta hydrolase fold CFLA_RS03750 PF14667 Polysaccharide biosynthesis C-terminal domain CFLA_RS03750 PF01943 Polysaccharide biosynthesis protein CFLA_RS03770 PF00313 'Cold-shock' DNA-binding domain CFLA_RS03775 PF11228 Protein of unknown function (DUF3027) CFLA_RS03795 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS03815 PF13936 Helix-turn-helix domain CFLA_RS03815 PF00665 Integrase core domain CFLA_RS03820 PF02350 UDP-N-acetylglucosamine 2-epimerase CFLA_RS03830 PF08485 Polysaccharide biosynthesis protein C-terminal CFLA_RS03830 PF02719 Polysaccharide biosynthesis protein CFLA_RS03840 PF02397 Bacterial sugar transferase CFLA_RS03865 PF05977 Transmembrane secretion effector CFLA_RS03880 PF00266 Aminotransferase class-V CFLA_RS03885 PF18357 Diphteria toxin repressor SH3 domain CFLA_RS03885 PF02742 Iron dependent repressor, metal binding and dimerisation domain CFLA_RS03885 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFLA_RS03890 PF01476 LysM domain CFLA_RS03890 PF08239 Bacterial SH3 domain CFLA_RS03890 PF00877 NlpC/P60 family CFLA_RS03905 PF00582 Universal stress protein family CFLA_RS03910 PF01037 Lrp/AsnC ligand binding domain CFLA_RS03920 PF00202 Aminotransferase class-III CFLA_RS03935 PF00248 Aldo/keto reductase family CFLA_RS03945 PF02566 OsmC-like protein CFLA_RS03950 PF02447 GntP family permease CFLA_RS04025 PF05729 NACHT domain CFLA_RS04025 PF00805 Pentapeptide repeats (8 copies) CFLA_RS04025 PF00400 WD domain, G-beta repeat CFLA_RS04030 PF01527 Transposase CFLA_RS04035 PF13333 Integrase core domain CFLA_RS04035 PF13276 HTH-like domain CFLA_RS04035 PF00665 Integrase core domain CFLA_RS04040 PF13333 Integrase core domain CFLA_RS04040 PF00665 Integrase core domain CFLA_RS04040 PF13276 HTH-like domain CFLA_RS04075 PF06452 Carbohydrate family 9 binding domain-like CFLA_RS04075 PF00331 Glycosyl hydrolase family 10 CFLA_RS04075 PF00395 S-layer homology domain CFLA_RS04075 PF02018 Carbohydrate binding domain CFLA_RS04080 PF00271 Helicase conserved C-terminal domain CFLA_RS04080 PF00176 SNF2 family N-terminal domain CFLA_RS04080 PF04434 SWIM zinc finger CFLA_RS04095 PF04542 Sigma-70 region 2 CFLA_RS04095 PF08281 Sigma-70, region 4 CFLA_RS04100 PF03795 YCII-related domain CFLA_RS04105 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CFLA_RS04105 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CFLA_RS04110 PF13298 DNA polymerase Ligase (LigD) CFLA_RS04110 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS04110 PF01068 ATP dependent DNA ligase domain CFLA_RS04110 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS04110 PF13298 DNA polymerase Ligase (LigD) CFLA_RS04110 PF01068 ATP dependent DNA ligase domain CFLA_RS04115 PF03631 Virulence factor BrkB CFLA_RS04120 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS04125 PF01229 Glycosyl hydrolases family 39 CFLA_RS04130 PF13492 GAF domain CFLA_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS04130 PF07730 Histidine kinase CFLA_RS04135 PF00072 Response regulator receiver domain CFLA_RS04135 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS04140 PF07730 Histidine kinase CFLA_RS04150 PF02517 CPBP intramembrane metalloprotease CFLA_RS04180 PF01741 Large-conductance mechanosensitive channel, MscL CFLA_RS04195 PF01804 Penicillin amidase CFLA_RS04200 PF01812 5-formyltetrahydrofolate cyclo-ligase family CFLA_RS04205 PF03453 MoeA N-terminal region (domain I and II) CFLA_RS04205 PF00994 Probable molybdopterin binding domain CFLA_RS04205 PF03454 MoeA C-terminal region (domain IV) CFLA_RS04230 PF04226 Transglycosylase associated protein CFLA_RS04235 PF00728 Glycosyl hydrolase family 20, catalytic domain CFLA_RS04235 PF02838 Glycosyl hydrolase family 20, domain 2 CFLA_RS04240 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase CFLA_RS04240 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CFLA_RS04245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFLA_RS04270 PF09334 tRNA synthetases class I (M) CFLA_RS04275 PF01026 TatD related DNase CFLA_RS04285 PF01476 LysM domain CFLA_RS04285 PF06737 Transglycosylase-like domain CFLA_RS04290 PF00398 Ribosomal RNA adenine dimethylase CFLA_RS04295 PF08544 GHMP kinases C terminal CFLA_RS04295 PF00288 GHMP kinases N terminal domain CFLA_RS04300 PF05384 Sensor protein DegS CFLA_RS04300 PF07730 Histidine kinase CFLA_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS04305 PF00072 Response regulator receiver domain CFLA_RS04305 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS04310 PF13732 Domain of unknown function (DUF4162) CFLA_RS04310 PF00005 ABC transporter CFLA_RS04325 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS04325 PF00072 Response regulator receiver domain CFLA_RS04330 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS04330 PF00672 HAMP domain CFLA_RS04335 PF04705 Thiostrepton-resistance methylase, N terminus CFLA_RS04335 PF00588 SpoU rRNA Methylase family CFLA_RS04345 PF12848 ABC transporter CFLA_RS04345 PF00005 ABC transporter CFLA_RS04345 PF16326 ABC transporter C-terminal domain CFLA_RS04350 PF01022 Bacterial regulatory protein, arsR family CFLA_RS04355 PF07690 Major Facilitator Superfamily CFLA_RS04360 PF01047 MarR family CFLA_RS04380 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS04400 PF03350 Uncharacterized protein family, UPF0114 CFLA_RS04410 PF13378 Enolase C-terminal domain-like CFLA_RS04410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFLA_RS04415 PF02614 Glucuronate isomerase CFLA_RS04420 PF12804 MobA-like NTP transferase domain CFLA_RS04425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CFLA_RS04425 PF14572 Phosphoribosyl synthetase-associated domain CFLA_RS04435 PF14693 Ribosomal protein TL5, C-terminal domain CFLA_RS04435 PF01386 Ribosomal L25p family CFLA_RS04440 PF01195 Peptidyl-tRNA hydrolase CFLA_RS04445 PF02397 Bacterial sugar transferase CFLA_RS04450 PF00294 pfkB family carbohydrate kinase CFLA_RS04450 PF01467 Cytidylyltransferase-like CFLA_RS04475 PF00534 Glycosyl transferases group 1 CFLA_RS04505 PF13614 AAA domain CFLA_RS04510 PF17757 UvrB interaction domain CFLA_RS04510 PF03461 TRCF domain CFLA_RS04510 PF00271 Helicase conserved C-terminal domain CFLA_RS04510 PF02559 CarD-like/TRCF domain CFLA_RS04510 PF00270 DEAD/DEAH box helicase CFLA_RS04515 PF04055 Radical SAM superfamily CFLA_RS04515 PF06463 Molybdenum Cofactor Synthesis C CFLA_RS04530 PF03819 MazG nucleotide pyrophosphohydrolase domain CFLA_RS04535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFLA_RS04535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFLA_RS04535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CFLA_RS04540 PF02233 NAD(P) transhydrogenase beta subunit CFLA_RS04545 PF02018 Carbohydrate binding domain CFLA_RS04545 PF00395 S-layer homology domain CFLA_RS04545 PF00331 Glycosyl hydrolase family 10 CFLA_RS04545 PF06452 Carbohydrate family 9 binding domain-like CFLA_RS04550 PF17827 PrmC N-terminal domain CFLA_RS04550 PF13649 Methyltransferase domain CFLA_RS04555 PF00113 Enolase, C-terminal TIM barrel domain CFLA_RS04555 PF03952 Enolase, N-terminal domain CFLA_RS04580 PF02541 Ppx/GppA phosphatase family CFLA_RS04595 PF03471 Transporter associated domain CFLA_RS04595 PF01595 Cyclin M transmembrane N-terminal domain CFLA_RS04595 PF00571 CBS domain CFLA_RS04600 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS04615 PF04954 Siderophore-interacting protein CFLA_RS04615 PF08021 Siderophore-interacting FAD-binding domain CFLA_RS04620 PF00873 AcrB/AcrD/AcrF family CFLA_RS04630 PF00005 ABC transporter CFLA_RS04645 PF00571 CBS domain CFLA_RS04645 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS04650 PF05448 Acetyl xylan esterase (AXE1) CFLA_RS04660 PF00561 alpha/beta hydrolase fold CFLA_RS04670 PF01565 FAD binding domain CFLA_RS04670 PF04030 D-arabinono-1,4-lactone oxidase CFLA_RS04685 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS04685 PF01068 ATP dependent DNA ligase domain CFLA_RS04695 PF01850 PIN domain CFLA_RS04700 PF01625 Peptide methionine sulfoxide reductase CFLA_RS04705 PF01053 Cys/Met metabolism PLP-dependent enzyme CFLA_RS04710 PF01594 AI-2E family transporter CFLA_RS04715 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS04715 PF13291 ACT domain CFLA_RS04720 PF01272 Transcription elongation factor, GreA/GreB, C-term CFLA_RS04720 PF03449 Transcription elongation factor, N-terminal CFLA_RS04730 PF02585 GlcNAc-PI de-N-acetylase CFLA_RS04740 PF00795 Carbon-nitrogen hydrolase CFLA_RS04745 PF03006 Haemolysin-III related CFLA_RS04750 PF01255 Putative undecaprenyl diphosphate synthase CFLA_RS04755 PF02562 PhoH-like protein CFLA_RS04755 PF13638 PIN domain CFLA_RS04760 PF12791 Anti-sigma factor N-terminus CFLA_RS04760 PF07691 PA14 domain CFLA_RS04785 PF07690 Major Facilitator Superfamily CFLA_RS04810 PF12704 MacB-like periplasmic core domain CFLA_RS04810 PF00005 ABC transporter CFLA_RS04810 PF02687 FtsX-like permease family CFLA_RS04815 PF00005 ABC transporter CFLA_RS04815 PF02687 FtsX-like permease family CFLA_RS04815 PF12704 MacB-like periplasmic core domain CFLA_RS04830 PF10415 Fumarase C C-terminus CFLA_RS04830 PF00206 Lyase CFLA_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS04850 PF17912 MalK OB fold domain CFLA_RS04850 PF00005 ABC transporter CFLA_RS04860 PF00484 Carbonic anhydrase CFLA_RS04865 PF00294 pfkB family carbohydrate kinase CFLA_RS04870 PF02609 Exonuclease VII small subunit CFLA_RS04875 PF02601 Exonuclease VII, large subunit CFLA_RS04875 PF13742 OB-fold nucleic acid binding domain CFLA_RS04880 PF02401 LytB protein CFLA_RS04890 PF02646 RmuC family CFLA_RS04905 PF13732 Domain of unknown function (DUF4162) CFLA_RS04905 PF00005 ABC transporter CFLA_RS04920 PF06071 Protein of unknown function (DUF933) CFLA_RS04920 PF01926 50S ribosome-binding GTPase CFLA_RS04930 PF00472 RF-1 domain CFLA_RS04930 PF03462 PCRF domain CFLA_RS04935 PF01329 Pterin 4 alpha carbinolamine dehydratase CFLA_RS04940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFLA_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS04950 PF12911 N-terminal TM domain of oligopeptide transport permease C CFLA_RS04950 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS04960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFLA_RS04960 PF00005 ABC transporter CFLA_RS04970 PF14492 Elongation Factor G, domain II CFLA_RS04970 PF00679 Elongation factor G C-terminus CFLA_RS04970 PF00009 Elongation factor Tu GTP binding domain CFLA_RS04970 PF03144 Elongation factor Tu domain 2 CFLA_RS04975 PF02585 GlcNAc-PI de-N-acetylase CFLA_RS04985 PF01613 Flavin reductase like domain CFLA_RS05000 PF00037 4Fe-4S binding domain CFLA_RS05005 PF00155 Aminotransferase class I and II CFLA_RS05010 PF00285 Citrate synthase, C-terminal domain CFLA_RS05020 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CFLA_RS05020 PF14602 Hexapeptide repeat of succinyl-transferase CFLA_RS05025 PF07687 Peptidase dimerisation domain CFLA_RS05025 PF01546 Peptidase family M20/M25/M40 CFLA_RS05030 PF13186 Iron-sulfur cluster-binding domain CFLA_RS05030 PF04055 Radical SAM superfamily CFLA_RS05035 PF03641 Possible lysine decarboxylase CFLA_RS05040 PF00809 Pterin binding enzyme CFLA_RS05055 PF00883 Cytosol aminopeptidase family, catalytic domain CFLA_RS05055 PF02789 Cytosol aminopeptidase family, N-terminal domain CFLA_RS05060 PF01596 O-methyltransferase CFLA_RS05065 PF08281 Sigma-70, region 4 CFLA_RS05065 PF04542 Sigma-70 region 2 CFLA_RS05075 PF13180 PDZ domain CFLA_RS05085 PF00579 tRNA synthetases class I (W and Y) CFLA_RS05105 PF13085 2Fe-2S iron-sulfur cluster binding domain CFLA_RS05110 PF02910 Fumarate reductase flavoprotein C-term CFLA_RS05110 PF00890 FAD binding domain CFLA_RS05120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFLA_RS05125 PF01050 Mannose-6-phosphate isomerase CFLA_RS05125 PF00483 Nucleotidyl transferase CFLA_RS05130 PF01546 Peptidase family M20/M25/M40 CFLA_RS05130 PF04107 Glutamate-cysteine ligase family 2(GCS2) CFLA_RS05135 PF02608 ABC transporter substrate-binding protein PnrA-like CFLA_RS05140 PF00005 ABC transporter CFLA_RS05145 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS05150 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS05155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFLA_RS05160 PF00591 Glycosyl transferase family, a/b domain CFLA_RS05160 PF02885 Glycosyl transferase family, helical bundle domain CFLA_RS05160 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CFLA_RS05170 PF00962 Adenosine/AMP deaminase CFLA_RS05175 PF01791 DeoC/LacD family aldolase CFLA_RS05185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFLA_RS05185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFLA_RS05185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFLA_RS05185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFLA_RS05190 PF01048 Phosphorylase superfamily CFLA_RS05195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS05195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFLA_RS05200 PF02545 Maf-like protein CFLA_RS05200 PF00293 NUDIX domain CFLA_RS05205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFLA_RS05205 PF00364 Biotin-requiring enzyme CFLA_RS05205 PF00289 Biotin carboxylase, N-terminal domain CFLA_RS05205 PF02785 Biotin carboxylase C-terminal domain CFLA_RS05210 PF02545 Maf-like protein CFLA_RS05220 PF13416 Bacterial extracellular solute-binding protein CFLA_RS05240 PF01039 Carboxyl transferase domain CFLA_RS05250 PF16701 Adenylate cyclase regulatory domain CFLA_RS05250 PF00211 Adenylate and Guanylate cyclase catalytic domain CFLA_RS05255 PF02586 SOS response associated peptidase (SRAP) CFLA_RS05260 PF07690 Major Facilitator Superfamily CFLA_RS05265 PF00155 Aminotransferase class I and II CFLA_RS05280 PF00171 Aldehyde dehydrogenase family CFLA_RS05280 PF00465 Iron-containing alcohol dehydrogenase CFLA_RS05285 PF01594 AI-2E family transporter CFLA_RS05295 PF07729 FCD domain CFLA_RS05295 PF00392 Bacterial regulatory proteins, gntR family CFLA_RS05300 PF00750 tRNA synthetases class I (R) CFLA_RS05300 PF05746 DALR anticodon binding domain CFLA_RS05300 PF03485 Arginyl tRNA synthetase N terminal domain CFLA_RS05305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFLA_RS05305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFLA_RS05310 PF01126 Heme oxygenase CFLA_RS05315 PF03447 Homoserine dehydrogenase, NAD binding domain CFLA_RS05315 PF01842 ACT domain CFLA_RS05315 PF00742 Homoserine dehydrogenase CFLA_RS05320 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS05325 PF00288 GHMP kinases N terminal domain CFLA_RS05325 PF08544 GHMP kinases C terminal CFLA_RS05330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFLA_RS05330 PF07498 Rho termination factor, N-terminal domain CFLA_RS05330 PF07497 Rho termination factor, RNA-binding domain CFLA_RS05330 PF07497 Rho termination factor, RNA-binding domain CFLA_RS05330 PF07498 Rho termination factor, N-terminal domain CFLA_RS05330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFLA_RS05340 PF01197 Ribosomal protein L31 CFLA_RS05345 PF00472 RF-1 domain CFLA_RS05345 PF03462 PCRF domain CFLA_RS05350 PF17827 PrmC N-terminal domain CFLA_RS05350 PF05175 Methyltransferase small domain CFLA_RS05355 PF01300 Telomere recombination CFLA_RS05360 PF00953 Glycosyl transferase family 4 CFLA_RS05370 PF00119 ATP synthase A chain CFLA_RS05375 PF00137 ATP synthase subunit C CFLA_RS05380 PF00430 ATP synthase B/B' CF(0) CFLA_RS05385 PF00213 ATP synthase delta (OSCP) subunit CFLA_RS05390 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFLA_RS05390 PF00306 ATP synthase alpha/beta chain, C terminal domain CFLA_RS05390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFLA_RS05395 PF00231 ATP synthase CFLA_RS05400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFLA_RS05400 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFLA_RS05405 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CFLA_RS05405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CFLA_RS05415 PF01939 Endonuclease NucS CFLA_RS05420 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS05420 PF17932 Tetracyclin repressor-like, C-terminal domain CFLA_RS05450 PF01979 Amidohydrolase family CFLA_RS05455 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS05460 PF00232 Glycosyl hydrolase family 1 CFLA_RS05500 PF00085 Thioredoxin CFLA_RS05520 PF00128 Alpha amylase, catalytic domain CFLA_RS05520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFLA_RS05520 PF02806 Alpha amylase, C-terminal all-beta domain CFLA_RS05525 PF16875 Glycosyl hydrolase family 36 N-terminal domain CFLA_RS05525 PF16874 Glycosyl hydrolase family 36 C-terminal domain CFLA_RS05530 PF01636 Phosphotransferase enzyme family CFLA_RS05530 PF18085 Maltokinase N-terminal cap domain CFLA_RS05535 PF00128 Alpha amylase, catalytic domain CFLA_RS05535 PF16657 Maltogenic Amylase, C-terminal domain CFLA_RS05540 PF11896 Domain of unknown function (DUF3416) CFLA_RS05540 PF00128 Alpha amylase, catalytic domain CFLA_RS05545 PF11897 Protein of unknown function (DUF3417) CFLA_RS05545 PF00343 Carbohydrate phosphorylase CFLA_RS05555 PF00890 FAD binding domain CFLA_RS05560 PF00128 Alpha amylase, catalytic domain CFLA_RS05560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFLA_RS05565 PF01012 Electron transfer flavoprotein domain CFLA_RS05570 PF01012 Electron transfer flavoprotein domain CFLA_RS05570 PF00766 Electron transfer flavoprotein FAD-binding domain CFLA_RS05580 PF00266 Aminotransferase class-V CFLA_RS05620 PF03120 NAD-dependent DNA ligase OB-fold domain CFLA_RS05620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CFLA_RS05620 PF12826 Helix-hairpin-helix motif CFLA_RS05620 PF00533 BRCA1 C Terminus (BRCT) domain CFLA_RS05620 PF01653 NAD-dependent DNA ligase adenylation domain CFLA_RS05630 PF00583 Acetyltransferase (GNAT) family CFLA_RS05645 PF02686 Glu-tRNAGln amidotransferase C subunit CFLA_RS05650 PF01425 Amidase CFLA_RS05655 PF02934 GatB/GatE catalytic domain CFLA_RS05655 PF02637 GatB domain CFLA_RS05660 PF13302 Acetyltransferase (GNAT) domain CFLA_RS05665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFLA_RS05670 PF03441 FAD binding domain of DNA photolyase CFLA_RS05670 PF00875 DNA photolyase CFLA_RS05685 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS05705 PF14310 Fibronectin type III-like domain CFLA_RS05705 PF00933 Glycosyl hydrolase family 3 N terminal domain CFLA_RS05705 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFLA_RS05710 PF00920 Dehydratase family CFLA_RS05715 PF00563 EAL domain CFLA_RS05715 PF03707 Bacterial signalling protein N terminal repeat CFLA_RS05715 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS05730 PF00920 Dehydratase family CFLA_RS05790 PF01580 FtsK/SpoIIIE family CFLA_RS05790 PF12538 DNA transporter CFLA_RS05805 PF17863 AAA lid domain CFLA_RS05805 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS05810 PF01882 Protein of unknown function DUF58 CFLA_RS05820 PF00069 Protein kinase domain CFLA_RS05820 PF03793 PASTA domain CFLA_RS05830 PF00128 Alpha amylase, catalytic domain CFLA_RS05840 PF00005 ABC transporter CFLA_RS05850 PF01494 FAD binding domain CFLA_RS05860 PF02797 Chalcone and stilbene synthases, C-terminal domain CFLA_RS05860 PF00195 Chalcone and stilbene synthases, N-terminal domain CFLA_RS05875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFLA_RS05875 PF00205 Thiamine pyrophosphate enzyme, central domain CFLA_RS05875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFLA_RS05880 PF10369 Small subunit of acetolactate synthase CFLA_RS05880 PF01842 ACT domain CFLA_RS05885 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CFLA_RS05885 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CFLA_RS05895 PF00180 Isocitrate/isopropylmalate dehydrogenase CFLA_RS05900 PF01063 Amino-transferase class IV CFLA_RS05910 PF08502 LeuA allosteric (dimerisation) domain CFLA_RS05910 PF00682 HMGL-like CFLA_RS05920 PF03099 Biotin/lipoate A/B protein ligase family CFLA_RS05920 PF10437 Bacterial lipoate protein ligase C-terminus CFLA_RS05935 PF00005 ABC transporter CFLA_RS05945 PF02656 Domain of unknown function (DUF202) CFLA_RS05950 PF01168 Alanine racemase, N-terminal domain CFLA_RS05955 PF02622 Uncharacterized ACR, COG1678 CFLA_RS05960 PF03733 Inner membrane component domain CFLA_RS05965 PF04073 Aminoacyl-tRNA editing domain CFLA_RS05980 PF01636 Phosphotransferase enzyme family CFLA_RS05985 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS05985 PF00501 AMP-binding enzyme CFLA_RS06000 PF00075 RNase H CFLA_RS06010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFLA_RS06010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFLA_RS06015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFLA_RS06015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFLA_RS06025 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS06040 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CFLA_RS06040 PF01243 Pyridoxamine 5'-phosphate oxidase CFLA_RS06050 PF08241 Methyltransferase domain CFLA_RS06055 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFLA_RS06060 PF01235 Sodium:alanine symporter family CFLA_RS06065 PF04607 Region found in RelA / SpoT proteins CFLA_RS06070 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFLA_RS06080 PF08241 Methyltransferase domain CFLA_RS06085 PF00459 Inositol monophosphatase family CFLA_RS06090 PF03193 RsgA GTPase CFLA_RS06095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFLA_RS06105 PF04542 Sigma-70 region 2 CFLA_RS06105 PF08281 Sigma-70, region 4 CFLA_RS06115 PF00437 Type II/IV secretion system protein CFLA_RS06145 PF01965 DJ-1/PfpI family CFLA_RS06150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFLA_RS06150 PF16078 2-oxoglutarate dehydrogenase N-terminus CFLA_RS06150 PF02779 Transketolase, pyrimidine binding domain CFLA_RS06150 PF16870 2-oxoglutarate dehydrogenase C-terminal CFLA_RS06150 PF00676 Dehydrogenase E1 component CFLA_RS06155 PF00672 HAMP domain CFLA_RS06155 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS06160 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS06160 PF00072 Response regulator receiver domain CFLA_RS06165 PF01595 Cyclin M transmembrane N-terminal domain CFLA_RS06165 PF03471 Transporter associated domain CFLA_RS06165 PF00571 CBS domain CFLA_RS06170 PF00571 CBS domain CFLA_RS06170 PF01595 Cyclin M transmembrane N-terminal domain CFLA_RS06220 PF07508 Recombinase CFLA_RS06220 PF13408 Recombinase zinc beta ribbon domain CFLA_RS06220 PF00239 Resolvase, N terminal domain CFLA_RS06225 PF00437 Type II/IV secretion system protein CFLA_RS06260 PF00582 Universal stress protein family CFLA_RS06265 PF03462 PCRF domain CFLA_RS06265 PF00472 RF-1 domain CFLA_RS06270 PF00005 ABC transporter CFLA_RS06275 PF18075 FtsX extracellular domain CFLA_RS06275 PF02687 FtsX-like permease family CFLA_RS06285 PF01668 SmpB protein CFLA_RS06295 PF00270 DEAD/DEAH box helicase CFLA_RS06295 PF00271 Helicase conserved C-terminal domain CFLA_RS06295 PF00570 HRDC domain CFLA_RS06295 PF09382 RQC domain CFLA_RS06295 PF16124 RecQ zinc-binding CFLA_RS06305 PF14256 YwiC-like protein CFLA_RS06310 PF01068 ATP dependent DNA ligase domain CFLA_RS06310 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS06395 PF02954 Bacterial regulatory protein, Fis family CFLA_RS06395 PF00158 Sigma-54 interaction domain CFLA_RS06395 PF00072 Response regulator receiver domain CFLA_RS06400 PF07478 D-ala D-ala ligase C-terminus CFLA_RS06405 PF02811 PHP domain CFLA_RS06410 PF00535 Glycosyl transferase family 2 CFLA_RS06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS06415 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS06415 PF00672 HAMP domain CFLA_RS06415 PF13426 PAS domain CFLA_RS06430 PF07728 AAA domain (dynein-related subfamily) CFLA_RS06440 PF05762 VWA domain containing CoxE-like protein CFLA_RS06470 PF05958 tRNA (Uracil-5-)-methyltransferase CFLA_RS06475 PF00296 Luciferase-like monooxygenase CFLA_RS06480 PF12146 Serine aminopeptidase, S33 CFLA_RS06505 PF00005 ABC transporter CFLA_RS06515 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS06515 PF00072 Response regulator receiver domain CFLA_RS06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS06520 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS06520 PF00672 HAMP domain CFLA_RS06520 PF16527 Two-component sensor protein CpxA, periplasmic domain CFLA_RS06535 PF07690 Major Facilitator Superfamily CFLA_RS06540 PF01048 Phosphorylase superfamily CFLA_RS06545 PF02664 S-Ribosylhomocysteinase (LuxS) CFLA_RS06550 PF01256 Carbohydrate kinase CFLA_RS06570 PF01740 STAS domain CFLA_RS06600 PF00342 Phosphoglucose isomerase CFLA_RS06610 PF03211 Pectate lyase CFLA_RS06615 PF00294 pfkB family carbohydrate kinase CFLA_RS06620 PF00392 Bacterial regulatory proteins, gntR family CFLA_RS06635 PF04851 Type III restriction enzyme, res subunit CFLA_RS06640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFLA_RS06640 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFLA_RS06645 PF02617 ATP-dependent Clp protease adaptor protein ClpS CFLA_RS06655 PF01177 Asp/Glu/Hydantoin racemase CFLA_RS06665 PF01138 3' exoribonuclease family, domain 1 CFLA_RS06665 PF03725 3' exoribonuclease family, domain 2 CFLA_RS06670 PF01725 Ham1 family CFLA_RS06675 PF00005 ABC transporter CFLA_RS06690 PF00085 Thioredoxin CFLA_RS06705 PF00578 AhpC/TSA family CFLA_RS06715 PF00166 Chaperonin 10 Kd subunit CFLA_RS06730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFLA_RS06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS06730 PF00403 Heavy-metal-associated domain CFLA_RS06740 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS06745 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS06750 PF00571 CBS domain CFLA_RS06750 PF00005 ABC transporter CFLA_RS06765 PF00929 Exonuclease CFLA_RS06785 PF03099 Biotin/lipoate A/B protein ligase family CFLA_RS06785 PF00293 NUDIX domain CFLA_RS06790 PF00857 Isochorismatase family CFLA_RS06800 PF10396 GTP-binding protein TrmE N-terminus CFLA_RS06800 PF12631 MnmE helical domain CFLA_RS06800 PF01926 50S ribosome-binding GTPase CFLA_RS06815 PF12848 ABC transporter CFLA_RS06815 PF00005 ABC transporter CFLA_RS06835 PF11066 Protein of unknown function (DUF2867) CFLA_RS06835 PF13460 NAD(P)H-binding CFLA_RS06850 PF01152 Bacterial-like globin CFLA_RS06855 PF00391 PEP-utilising enzyme, mobile domain CFLA_RS06855 PF05524 PEP-utilising enzyme, N-terminal CFLA_RS06855 PF02896 PEP-utilising enzyme, TIM barrel domain CFLA_RS06860 PF00367 phosphotransferase system, EIIB CFLA_RS06865 PF02378 Phosphotransferase system, EIIC CFLA_RS06865 PF00367 phosphotransferase system, EIIB CFLA_RS06865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CFLA_RS06870 PF00924 Mechanosensitive ion channel CFLA_RS06875 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CFLA_RS06875 PF00326 Prolyl oligopeptidase family CFLA_RS06900 PF02446 4-alpha-glucanotransferase CFLA_RS06910 PF01433 Peptidase family M1 domain CFLA_RS06910 PF11838 ERAP1-like C-terminal domain CFLA_RS06915 PF01323 DSBA-like thioredoxin domain CFLA_RS06925 PF05649 Peptidase family M13 CFLA_RS06925 PF01431 Peptidase family M13 CFLA_RS06930 PF02502 Ribose/Galactose Isomerase CFLA_RS06935 PF13530 Sterol carrier protein domain CFLA_RS06935 PF17668 Acetyltransferase (GNAT) domain CFLA_RS06940 PF13581 Histidine kinase-like ATPase domain CFLA_RS06940 PF08448 PAS fold CFLA_RS06940 PF07228 Stage II sporulation protein E (SpoIIE) CFLA_RS06940 PF13466 STAS domain CFLA_RS06950 PF13380 CoA binding domain CFLA_RS06955 PF01053 Cys/Met metabolism PLP-dependent enzyme CFLA_RS06960 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS06960 PF00501 AMP-binding enzyme CFLA_RS06960 PF16177 Acetyl-coenzyme A synthetase N-terminus CFLA_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS06975 PF00005 ABC transporter CFLA_RS06985 PF01757 Acyltransferase family CFLA_RS06990 PF00296 Luciferase-like monooxygenase CFLA_RS07005 PF00132 Bacterial transferase hexapeptide (six repeats) CFLA_RS07010 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS07030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFLA_RS07030 PF05697 Bacterial trigger factor protein (TF) CFLA_RS07030 PF05698 Bacterial trigger factor protein (TF) C-terminus CFLA_RS07035 PF00574 Clp protease CFLA_RS07040 PF00574 Clp protease CFLA_RS07045 PF06689 ClpX C4-type zinc finger CFLA_RS07045 PF07724 AAA domain (Cdc48 subfamily) CFLA_RS07045 PF10431 C-terminal, D2-small domain, of ClpB protein CFLA_RS07050 PF01817 Chorismate mutase type II CFLA_RS07050 PF02153 Prephenate dehydrogenase CFLA_RS07060 PF00501 AMP-binding enzyme CFLA_RS07070 PF00005 ABC transporter CFLA_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07085 PF08264 Anticodon-binding domain of tRNA CFLA_RS07085 PF00133 tRNA synthetases class I (I, L, M and V) CFLA_RS07115 PF01381 Helix-turn-helix CFLA_RS07120 PF00107 Zinc-binding dehydrogenase CFLA_RS07120 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS07130 PF00296 Luciferase-like monooxygenase CFLA_RS07135 PF00881 Nitroreductase family CFLA_RS07135 PF01996 F420-0:Gamma-glutamyl ligase CFLA_RS07160 PF05958 tRNA (Uracil-5-)-methyltransferase CFLA_RS07160 PF01938 TRAM domain CFLA_RS07165 PF01580 FtsK/SpoIIIE family CFLA_RS07200 PF00005 ABC transporter CFLA_RS07205 PF01032 FecCD transport family CFLA_RS07225 PF00795 Carbon-nitrogen hydrolase CFLA_RS07230 PF01979 Amidohydrolase family CFLA_RS07235 PF00296 Luciferase-like monooxygenase CFLA_RS07240 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07245 PF00005 ABC transporter CFLA_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07255 PF09084 NMT1/THI5 like CFLA_RS07260 PF00202 Aminotransferase class-III CFLA_RS07265 PF00106 short chain dehydrogenase CFLA_RS07270 PF00664 ABC transporter transmembrane region CFLA_RS07270 PF00005 ABC transporter CFLA_RS07275 PF00005 ABC transporter CFLA_RS07275 PF00664 ABC transporter transmembrane region CFLA_RS07280 PF04973 Nicotinamide mononucleotide transporter CFLA_RS07285 PF01381 Helix-turn-helix CFLA_RS07285 PF13521 AAA domain CFLA_RS07320 PF02016 LD-carboxypeptidase N-terminal domain CFLA_RS07320 PF17676 LD-carboxypeptidase C-terminal domain CFLA_RS07330 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS07335 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS07350 PF00133 tRNA synthetases class I (I, L, M and V) CFLA_RS07350 PF08264 Anticodon-binding domain of tRNA CFLA_RS07355 PF08245 Mur ligase middle domain CFLA_RS07355 PF02875 Mur ligase family, glutamate ligase domain CFLA_RS07360 PF02733 Dak1 domain CFLA_RS07365 PF02734 DAK2 domain CFLA_RS07370 PF03610 PTS system fructose IIA component CFLA_RS07370 PF00381 PTS HPr component phosphorylation site CFLA_RS07370 PF05524 PEP-utilising enzyme, N-terminal CFLA_RS07370 PF00391 PEP-utilising enzyme, mobile domain CFLA_RS07380 PF00334 Nucleoside diphosphate kinase CFLA_RS07385 PF02463 RecF/RecN/SMC N terminal domain CFLA_RS07385 PF06470 SMC proteins Flexible Hinge Domain CFLA_RS07395 PF02881 SRP54-type protein, helical bundle domain CFLA_RS07395 PF00448 SRP54-type protein, GTPase domain CFLA_RS07400 PF00909 Ammonium Transporter Family CFLA_RS07405 PF00543 Nitrogen regulatory protein P-II CFLA_RS07410 PF01966 HD domain CFLA_RS07410 PF01909 Nucleotidyltransferase domain CFLA_RS07410 PF08335 GlnD PII-uridylyltransferase CFLA_RS07415 PF00448 SRP54-type protein, GTPase domain CFLA_RS07415 PF02881 SRP54-type protein, helical bundle domain CFLA_RS07415 PF02978 Signal peptide binding domain CFLA_RS07420 PF01979 Amidohydrolase family CFLA_RS07425 PF00886 Ribosomal protein S16 CFLA_RS07435 PF05239 PRC-barrel domain CFLA_RS07435 PF01782 RimM N-terminal domain CFLA_RS07440 PF01746 tRNA (Guanine-1)-methyltransferase CFLA_RS07445 PF01245 Ribosomal protein L19 CFLA_RS07450 PF10502 Signal peptidase, peptidase S26 CFLA_RS07455 PF01351 Ribonuclease HII CFLA_RS07460 PF10611 Protein of unknown function (DUF2469) CFLA_RS07465 PF02021 Uncharacterised protein family UPF0102 CFLA_RS07470 PF13335 Magnesium chelatase, subunit ChlI C-terminal CFLA_RS07470 PF01078 Magnesium chelatase, subunit ChlI CFLA_RS07475 PF02481 DNA recombination-mediator protein A CFLA_RS07475 PF17782 DprA winged helix domain CFLA_RS07480 PF00589 Phage integrase family CFLA_RS07480 PF02899 Phage integrase, N-terminal SAM-like domain CFLA_RS07485 PF04539 Sigma-70 region 3 CFLA_RS07485 PF04542 Sigma-70 region 2 CFLA_RS07485 PF04545 Sigma-70, region 4 CFLA_RS07490 PF01551 Peptidase family M23 CFLA_RS07495 PF00318 Ribosomal protein S2 CFLA_RS07500 PF00889 Elongation factor TS CFLA_RS07505 PF00696 Amino acid kinase family CFLA_RS07510 PF01765 Ribosome recycling factor CFLA_RS07520 PF04055 Radical SAM superfamily CFLA_RS07530 PF13288 DXP reductoisomerase C-terminal domain CFLA_RS07530 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFLA_RS07530 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CFLA_RS07535 PF00355 Rieske [2Fe-2S] domain CFLA_RS07535 PF01266 FAD dependent oxidoreductase CFLA_RS07540 PF00202 Aminotransferase class-III CFLA_RS07550 PF00171 Aldehyde dehydrogenase family CFLA_RS07560 PF08402 TOBE domain CFLA_RS07560 PF00005 ABC transporter CFLA_RS07565 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07570 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07575 PF17820 PDZ domain CFLA_RS07575 PF02163 Peptidase family M50 CFLA_RS07580 PF04551 GcpE protein CFLA_RS07595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFLA_RS07595 PF06827 Zinc finger found in FPG and IleRS CFLA_RS07600 PF04073 Aminoacyl-tRNA editing domain CFLA_RS07600 PF03129 Anticodon binding domain CFLA_RS07600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFLA_RS07610 PF02576 RimP N-terminal domain CFLA_RS07615 PF08529 NusA N-terminal domain CFLA_RS07615 PF13184 NusA-like KH domain CFLA_RS07625 PF04760 Translation initiation factor IF-2, N-terminal region CFLA_RS07625 PF11987 Translation-initiation factor 2 CFLA_RS07625 PF00009 Elongation factor Tu GTP binding domain CFLA_RS07630 PF02033 Ribosome-binding factor A CFLA_RS07640 PF03030 Inorganic H+ pyrophosphatase CFLA_RS07645 PF01509 TruB family pseudouridylate synthase (N terminal domain) CFLA_RS07645 PF09142 tRNA Pseudouridine synthase II, C terminal CFLA_RS07645 PF16198 tRNA pseudouridylate synthase B C-terminal domain CFLA_RS07650 PF02018 Carbohydrate binding domain CFLA_RS07650 PF02927 Cellulase N-terminal ig-like domain CFLA_RS07650 PF00759 Glycosyl hydrolase family 9 CFLA_RS07650 PF07679 Immunoglobulin I-set domain CFLA_RS07655 PF01687 Riboflavin kinase CFLA_RS07655 PF06574 FAD synthetase CFLA_RS07660 PF00312 Ribosomal protein S15 CFLA_RS07665 PF00013 KH domain CFLA_RS07665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFLA_RS07665 PF01138 3' exoribonuclease family, domain 1 CFLA_RS07665 PF00575 S1 RNA binding domain CFLA_RS07670 PF00675 Insulinase (Peptidase family M16) CFLA_RS07670 PF05193 Peptidase M16 inactive domain CFLA_RS07680 PF05173 Dihydrodipicolinate reductase, C-terminus CFLA_RS07680 PF01113 Dihydrodipicolinate reductase, N-terminus CFLA_RS07705 PF00171 Aldehyde dehydrogenase family CFLA_RS07710 PF00303 Thymidylate synthase CFLA_RS07715 PF00186 Dihydrofolate reductase CFLA_RS07720 PF00701 Dihydrodipicolinate synthetase family CFLA_RS07725 PF12706 Beta-lactamase superfamily domain CFLA_RS07725 PF17770 Ribonuclease J C-terminal domain CFLA_RS07725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CFLA_RS07730 PF12833 Helix-turn-helix domain CFLA_RS07730 PF01965 DJ-1/PfpI family CFLA_RS07745 PF17854 FtsK alpha domain CFLA_RS07745 PF09397 Ftsk gamma domain CFLA_RS07745 PF01580 FtsK/SpoIIIE family CFLA_RS07750 PF03707 Bacterial signalling protein N terminal repeat CFLA_RS07750 PF00563 EAL domain CFLA_RS07750 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS07760 PF01066 CDP-alcohol phosphatidyltransferase CFLA_RS07765 PF02464 Competence-damaged protein CFLA_RS07765 PF18146 Damage-inducible protein CinA KH domain CFLA_RS07765 PF00994 Probable molybdopterin binding domain CFLA_RS07775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFLA_RS07775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFLA_RS07780 PF08494 DEAD/H associated CFLA_RS07780 PF00271 Helicase conserved C-terminal domain CFLA_RS07780 PF00270 DEAD/DEAH box helicase CFLA_RS07795 PF12706 Beta-lactamase superfamily domain CFLA_RS07800 PF00154 recA bacterial DNA recombination protein CFLA_RS07805 PF02631 RecX family CFLA_RS07810 PF00013 KH domain CFLA_RS07810 PF12072 Domain of unknown function (DUF3552) CFLA_RS07810 PF01966 HD domain CFLA_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS07825 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFLA_RS07830 PF00005 ABC transporter CFLA_RS07835 PF00919 Uncharacterized protein family UPF0004 CFLA_RS07835 PF04055 Radical SAM superfamily CFLA_RS07840 PF06826 Predicted Permease Membrane Region CFLA_RS07840 PF02080 TrkA-C domain CFLA_RS07865 PF01678 Diaminopimelate epimerase CFLA_RS07875 PF07690 Major Facilitator Superfamily CFLA_RS07880 PF05175 Methyltransferase small domain CFLA_RS07885 PF13167 GTP-binding GTPase N-terminal CFLA_RS07885 PF01926 50S ribosome-binding GTPase CFLA_RS07885 PF16360 GTP-binding GTPase Middle Region CFLA_RS07890 PF13307 Helicase C-terminal domain CFLA_RS07895 PF00056 lactate/malate dehydrogenase, NAD binding domain CFLA_RS07895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFLA_RS07905 PF00717 Peptidase S24-like CFLA_RS07905 PF01726 LexA DNA binding domain CFLA_RS07915 PF03477 ATP cone domain CFLA_RS07925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFLA_RS07925 PF01842 ACT domain CFLA_RS07925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFLA_RS07930 PF00553 Cellulose binding domain CFLA_RS07930 PF01341 Glycosyl hydrolases family 6 CFLA_RS07950 PF08448 PAS fold CFLA_RS07950 PF07228 Stage II sporulation protein E (SpoIIE) CFLA_RS07950 PF13466 STAS domain CFLA_RS07950 PF13581 Histidine kinase-like ATPase domain CFLA_RS07955 PF00360 Phytochrome region CFLA_RS07955 PF08446 PAS fold CFLA_RS07955 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS07955 PF01590 GAF domain CFLA_RS07960 PF00072 Response regulator receiver domain CFLA_RS07970 PF00313 'Cold-shock' DNA-binding domain CFLA_RS07975 PF01596 O-methyltransferase CFLA_RS08000 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS08000 PF17863 AAA lid domain CFLA_RS08005 PF02381 MraZ protein, putative antitoxin-like CFLA_RS08010 PF01795 MraW methylase family CFLA_RS08020 PF00905 Penicillin binding protein transpeptidase domain CFLA_RS08020 PF03717 Penicillin-binding Protein dimerisation domain CFLA_RS08025 PF01225 Mur ligase family, catalytic domain CFLA_RS08025 PF02875 Mur ligase family, glutamate ligase domain CFLA_RS08025 PF08245 Mur ligase middle domain CFLA_RS08030 PF01225 Mur ligase family, catalytic domain CFLA_RS08030 PF02875 Mur ligase family, glutamate ligase domain CFLA_RS08030 PF08245 Mur ligase middle domain CFLA_RS08035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CFLA_RS08035 PF00953 Glycosyl transferase family 4 CFLA_RS08040 PF02875 Mur ligase family, glutamate ligase domain CFLA_RS08040 PF08245 Mur ligase middle domain CFLA_RS08045 PF01098 Cell cycle protein CFLA_RS08050 PF01225 Mur ligase family, catalytic domain CFLA_RS08050 PF08245 Mur ligase middle domain CFLA_RS08050 PF02875 Mur ligase family, glutamate ligase domain CFLA_RS08060 PF12327 FtsZ family, C-terminal domain CFLA_RS08060 PF00091 Tubulin/FtsZ family, GTPase domain CFLA_RS08065 PF02578 Multi-copper polyphenol oxidoreductase laccase CFLA_RS08070 PF04472 Cell division protein SepF CFLA_RS08080 PF05103 DivIVA protein CFLA_RS08090 PF01252 Signal peptidase (SPase) II CFLA_RS08095 PF00849 RNA pseudouridylate synthase CFLA_RS08100 PF02811 PHP domain CFLA_RS08100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFLA_RS08100 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFLA_RS08100 PF14579 Helix-hairpin-helix motif CFLA_RS08125 PF00815 Histidinol dehydrogenase CFLA_RS08130 PF16124 RecQ zinc-binding CFLA_RS08130 PF00570 HRDC domain CFLA_RS08130 PF09382 RQC domain CFLA_RS08130 PF00270 DEAD/DEAH box helicase CFLA_RS08130 PF00271 Helicase conserved C-terminal domain CFLA_RS08135 PF00155 Aminotransferase class I and II CFLA_RS08140 PF00475 Imidazoleglycerol-phosphate dehydratase CFLA_RS08155 PF00977 Histidine biosynthesis protein CFLA_RS08170 PF13180 PDZ domain CFLA_RS08185 PF06628 Catalase-related immune-responsive CFLA_RS08185 PF00199 Catalase CFLA_RS08190 PF01475 Ferric uptake regulator family CFLA_RS08195 PF05198 Translation initiation factor IF-3, N-terminal domain CFLA_RS08195 PF00707 Translation initiation factor IF-3, C-terminal domain CFLA_RS08200 PF01632 Ribosomal protein L35 CFLA_RS08205 PF00453 Ribosomal protein L20 CFLA_RS08210 PF00588 SpoU rRNA Methylase family CFLA_RS08220 PF01409 tRNA synthetases class II core domain (F) CFLA_RS08220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CFLA_RS08225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CFLA_RS08225 PF03147 Ferredoxin-fold anticodon binding domain CFLA_RS08225 PF01588 Putative tRNA binding domain CFLA_RS08225 PF03483 B3/4 domain CFLA_RS08225 PF03484 tRNA synthetase B5 domain CFLA_RS08230 PF00149 Calcineurin-like phosphoesterase CFLA_RS08240 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS08245 PF02110 Hydroxyethylthiazole kinase family CFLA_RS08250 PF02581 Thiamine monophosphate synthase CFLA_RS08255 PF02581 Thiamine monophosphate synthase CFLA_RS08255 PF08543 Phosphomethylpyrimidine kinase CFLA_RS08255 PF03070 TENA/THI-4/PQQC family CFLA_RS08260 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS08275 PF00107 Zinc-binding dehydrogenase CFLA_RS08275 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS08280 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFLA_RS08280 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFLA_RS08285 PF01960 ArgJ family CFLA_RS08290 PF00696 Amino acid kinase family CFLA_RS08295 PF00202 Aminotransferase class-III CFLA_RS08300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFLA_RS08300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFLA_RS08305 PF01316 Arginine repressor, DNA binding domain CFLA_RS08305 PF02863 Arginine repressor, C-terminal domain CFLA_RS08310 PF00764 Arginosuccinate synthase CFLA_RS08315 PF00206 Lyase CFLA_RS08315 PF14698 Argininosuccinate lyase C-terminal CFLA_RS08330 PF02245 Methylpurine-DNA glycosylase (MPG) CFLA_RS08335 PF00579 tRNA synthetases class I (W and Y) CFLA_RS08375 PF01479 S4 domain CFLA_RS08375 PF01728 FtsJ-like methyltransferase CFLA_RS08380 PF01513 ATP-NAD kinase CFLA_RS08385 PF02463 RecF/RecN/SMC N terminal domain CFLA_RS08395 PF11382 Copper transport outer membrane protein, MctB CFLA_RS08405 PF03023 Lipid II flippase MurJ CFLA_RS08410 PF06418 CTP synthase N-terminus CFLA_RS08410 PF00117 Glutamine amidotransferase class-I CFLA_RS08415 PF00293 NUDIX domain CFLA_RS08430 PF13732 Domain of unknown function (DUF4162) CFLA_RS08430 PF00005 ABC transporter CFLA_RS08445 PF01458 Uncharacterized protein family (UPF0051) CFLA_RS08450 PF01458 Uncharacterized protein family (UPF0051) CFLA_RS08460 PF00005 ABC transporter CFLA_RS08465 PF00266 Aminotransferase class-V CFLA_RS08470 PF01592 NifU-like N terminal domain CFLA_RS08475 PF01883 Iron-sulfur cluster assembly protein CFLA_RS08480 PF04228 Putative neutral zinc metallopeptidase CFLA_RS08490 PF00005 ABC transporter CFLA_RS08495 PF02632 BioY family CFLA_RS08500 PF00005 ABC transporter CFLA_RS08500 PF12848 ABC transporter CFLA_RS08500 PF16326 ABC transporter C-terminal domain CFLA_RS08530 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS08540 PF00483 Nucleotidyl transferase CFLA_RS08545 PF13439 Glycosyltransferase Family 4 CFLA_RS08545 PF00534 Glycosyl transferases group 1 CFLA_RS08555 PF03989 DNA gyrase C-terminal domain, beta-propeller CFLA_RS08555 PF00521 DNA gyrase/topoisomerase IV, subunit A CFLA_RS08560 PF13380 CoA binding domain CFLA_RS08560 PF13607 Succinyl-CoA ligase like flavodoxin domain CFLA_RS08575 PF00265 Thymidine kinase CFLA_RS08580 PF11268 Protein of unknown function (DUF3071) CFLA_RS08585 PF03458 UPF0126 domain CFLA_RS08590 PF00459 Inositol monophosphatase family CFLA_RS08605 PF00692 dUTPase CFLA_RS08625 PF02254 TrkA-N domain CFLA_RS08625 PF02080 TrkA-C domain CFLA_RS08630 PF02254 TrkA-N domain CFLA_RS08630 PF02080 TrkA-C domain CFLA_RS08635 PF13520 Amino acid permease CFLA_RS08640 PF05958 tRNA (Uracil-5-)-methyltransferase CFLA_RS08640 PF01938 TRAM domain CFLA_RS08650 PF00330 Aconitase family (aconitate hydratase) CFLA_RS08650 PF00694 Aconitase C-terminal domain CFLA_RS08670 PF00293 NUDIX domain CFLA_RS08675 PF02540 NAD synthase CFLA_RS08675 PF00117 Glutamine amidotransferase class-I CFLA_RS08675 PF00958 GMP synthase C terminal domain CFLA_RS08680 PF00478 IMP dehydrogenase / GMP reductase domain CFLA_RS08680 PF00571 CBS domain CFLA_RS08690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFLA_RS08690 PF02779 Transketolase, pyrimidine binding domain CFLA_RS08690 PF02780 Transketolase, C-terminal domain CFLA_RS08695 PF01228 Glycine radical CFLA_RS08695 PF02901 Pyruvate formate lyase-like CFLA_RS08700 PF04055 Radical SAM superfamily CFLA_RS08710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFLA_RS08710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFLA_RS08710 PF00378 Enoyl-CoA hydratase/isomerase CFLA_RS08715 PF00108 Thiolase, N-terminal domain CFLA_RS08715 PF02803 Thiolase, C-terminal domain CFLA_RS08720 PF01612 3'-5' exonuclease CFLA_RS08720 PF00570 HRDC domain CFLA_RS08725 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS08725 PF00072 Response regulator receiver domain CFLA_RS08735 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFLA_RS08735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFLA_RS08745 PF01177 Asp/Glu/Hydantoin racemase CFLA_RS08760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFLA_RS08760 PF14824 Sirohaem biosynthesis protein central CFLA_RS08760 PF10414 Sirohaem synthase dimerisation region CFLA_RS08765 PF00009 Elongation factor Tu GTP binding domain CFLA_RS08770 PF01507 Phosphoadenosine phosphosulfate reductase family CFLA_RS08775 PF01507 Phosphoadenosine phosphosulfate reductase family CFLA_RS08780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFLA_RS08780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFLA_RS08790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFLA_RS08790 PF00128 Alpha amylase, catalytic domain CFLA_RS08795 PF00128 Alpha amylase, catalytic domain CFLA_RS08800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFLA_RS08800 PF00128 Alpha amylase, catalytic domain CFLA_RS08805 PF01841 Transglutaminase-like superfamily CFLA_RS08805 PF08379 Bacterial transglutaminase-like N-terminal region CFLA_RS08810 PF00535 Glycosyl transferase family 2 CFLA_RS08830 PF00005 ABC transporter CFLA_RS08830 PF03459 TOBE domain CFLA_RS08835 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS08850 PF02391 MoaE protein CFLA_RS08860 PF06463 Molybdenum Cofactor Synthesis C CFLA_RS08860 PF04055 Radical SAM superfamily CFLA_RS08865 PF03454 MoeA C-terminal region (domain IV) CFLA_RS08865 PF03453 MoeA N-terminal region (domain I and II) CFLA_RS08865 PF00994 Probable molybdopterin binding domain CFLA_RS08870 PF01967 MoaC family CFLA_RS08875 PF00994 Probable molybdopterin binding domain CFLA_RS08875 PF01967 MoaC family CFLA_RS08885 PF02613 Nitrate reductase delta subunit CFLA_RS08885 PF02665 Nitrate reductase gamma subunit CFLA_RS08885 PF00384 Molybdopterin oxidoreductase CFLA_RS08890 PF00384 Molybdopterin oxidoreductase CFLA_RS08890 PF02613 Nitrate reductase delta subunit CFLA_RS08890 PF02665 Nitrate reductase gamma subunit CFLA_RS08895 PF14711 Respiratory nitrate reductase beta C-terminal CFLA_RS08895 PF13247 4Fe-4S dicluster domain CFLA_RS08900 PF01568 Molydopterin dinucleotide binding domain CFLA_RS08900 PF00384 Molybdopterin oxidoreductase CFLA_RS08905 PF07690 Major Facilitator Superfamily CFLA_RS08925 PF07732 Multicopper oxidase CFLA_RS08930 PF07690 Major Facilitator Superfamily CFLA_RS08935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFLA_RS08935 PF00384 Molybdopterin oxidoreductase CFLA_RS08935 PF01568 Molydopterin dinucleotide binding domain CFLA_RS08945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFLA_RS08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS08945 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFLA_RS08945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFLA_RS08945 PF04324 BFD-like [2Fe-2S] binding domain CFLA_RS08955 PF10414 Sirohaem synthase dimerisation region CFLA_RS08955 PF14824 Sirohaem biosynthesis protein central CFLA_RS08955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFLA_RS08970 PF00535 Glycosyl transferase family 2 CFLA_RS08995 PF00117 Glutamine amidotransferase class-I CFLA_RS08995 PF04715 Anthranilate synthase component I, N terminal region CFLA_RS08995 PF00425 chorismate binding enzyme CFLA_RS09000 PF01063 Amino-transferase class IV CFLA_RS09015 PF00795 Carbon-nitrogen hydrolase CFLA_RS09015 PF02540 NAD synthase CFLA_RS09020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFLA_RS09020 PF03129 Anticodon binding domain CFLA_RS09020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFLA_RS09025 PF01230 HIT domain CFLA_RS09030 PF01066 CDP-alcohol phosphatidyltransferase CFLA_RS09035 PF03279 Bacterial lipid A biosynthesis acyltransferase CFLA_RS09040 PF13439 Glycosyltransferase Family 4 CFLA_RS09050 PF01680 SOR/SNZ family CFLA_RS09055 PF00293 NUDIX domain CFLA_RS09060 PF00155 Aminotransferase class I and II CFLA_RS09065 PF01174 SNO glutamine amidotransferase family CFLA_RS09070 PF01709 Transcriptional regulator CFLA_RS09075 PF02075 Crossover junction endodeoxyribonuclease RuvC CFLA_RS09080 PF07499 RuvA, C-terminal domain CFLA_RS09080 PF01330 RuvA N terminal domain CFLA_RS09085 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFLA_RS09085 PF05491 RuvB C-terminal winged helix domain CFLA_RS09085 PF17864 RuvB AAA lid domain CFLA_RS09095 PF07549 SecD/SecF GG Motif CFLA_RS09095 PF02355 Protein export membrane protein CFLA_RS09100 PF02355 Protein export membrane protein CFLA_RS09100 PF07549 SecD/SecF GG Motif CFLA_RS09105 PF00156 Phosphoribosyl transferase domain CFLA_RS09110 PF04607 Region found in RelA / SpoT proteins CFLA_RS09110 PF02824 TGS domain CFLA_RS09110 PF13291 ACT domain CFLA_RS09120 PF03993 Domain of Unknown Function (DUF349) CFLA_RS09125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFLA_RS09130 PF00753 Metallo-beta-lactamase superfamily CFLA_RS09135 PF03129 Anticodon binding domain CFLA_RS09135 PF13393 Histidyl-tRNA synthetase CFLA_RS09145 PF04055 Radical SAM superfamily CFLA_RS09150 PF01336 OB-fold nucleic acid binding domain CFLA_RS09150 PF02938 GAD domain CFLA_RS09150 PF00152 tRNA synthetases class II (D, K and N) CFLA_RS09170 PF03176 MMPL family CFLA_RS09175 PF12002 MgsA AAA+ ATPase C terminal CFLA_RS09175 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS09175 PF16193 AAA C-terminal domain CFLA_RS09180 PF01479 S4 domain CFLA_RS09180 PF00163 Ribosomal protein S4/S9 N-terminal domain CFLA_RS09200 PF02272 DHHA1 domain CFLA_RS09200 PF01411 tRNA synthetases class II (A) CFLA_RS09200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFLA_RS09205 PF03652 Holliday junction resolvase CFLA_RS09215 PF01488 Shikimate / quinate 5-dehydrogenase CFLA_RS09215 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFLA_RS09215 PF08501 Shikimate dehydrogenase substrate binding domain CFLA_RS09220 PF00437 Type II/IV secretion system protein CFLA_RS09220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CFLA_RS09225 PF00437 Type II/IV secretion system protein CFLA_RS09230 PF00482 Type II secretion system (T2SS), protein F CFLA_RS09235 PF14245 Type IV pilin PilA CFLA_RS09235 PF07963 Prokaryotic N-terminal methylation motif CFLA_RS09255 PF06750 Bacterial Peptidase A24 N-terminal domain CFLA_RS09255 PF01478 Type IV leader peptidase family CFLA_RS09260 PF11104 Type IV pilus assembly protein PilM; CFLA_RS09275 PF01264 Chorismate synthase CFLA_RS09280 PF01202 Shikimate kinase CFLA_RS09285 PF01761 3-dehydroquinate synthase CFLA_RS09305 PF09285 Elongation factor P, C-terminal CFLA_RS09305 PF01132 Elongation factor P (EF-P) OB domain CFLA_RS09305 PF08207 Elongation factor P (EF-P) KOW-like domain CFLA_RS09310 PF01029 NusB family CFLA_RS09315 PF13426 PAS domain CFLA_RS09315 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS09315 PF00563 EAL domain CFLA_RS09320 PF00156 Phosphoribosyl transferase domain CFLA_RS09325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFLA_RS09325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFLA_RS09330 PF01979 Amidohydrolase family CFLA_RS09340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CFLA_RS09340 PF00117 Glutamine amidotransferase class-I CFLA_RS09345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFLA_RS09345 PF02142 MGS-like domain CFLA_RS09345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFLA_RS09350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFLA_RS09365 PF00625 Guanylate kinase CFLA_RS09370 PF01192 RNA polymerase Rpb6 CFLA_RS09375 PF04127 DNA / pantothenate metabolism flavoprotein CFLA_RS09375 PF02441 Flavoprotein CFLA_RS09380 PF02773 S-adenosylmethionine synthetase, C-terminal domain CFLA_RS09380 PF00438 S-adenosylmethionine synthetase, N-terminal domain CFLA_RS09380 PF02772 S-adenosylmethionine synthetase, central domain CFLA_RS09385 PF17764 3′ DNA-binding domain (3′BD) CFLA_RS09390 PF00551 Formyl transferase CFLA_RS09390 PF02911 Formyl transferase, C-terminal domain CFLA_RS09395 PF01189 16S rRNA methyltransferase RsmB/F CFLA_RS09395 PF01029 NusB family CFLA_RS09400 PF00834 Ribulose-phosphate 3 epimerase family CFLA_RS09405 PF01872 RibD C-terminal domain CFLA_RS09405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFLA_RS09410 PF00677 Lumazine binding domain CFLA_RS09415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFLA_RS09415 PF00925 GTP cyclohydrolase II CFLA_RS09420 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFLA_RS09425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CFLA_RS09430 PF01634 ATP phosphoribosyltransferase CFLA_RS09430 PF08029 HisG, C-terminal domain CFLA_RS09445 PF13280 WYL domain CFLA_RS09460 PF02416 mttA/Hcf106 family CFLA_RS09465 PF00902 Sec-independent protein translocase protein (TatC) CFLA_RS09470 PF00781 Diacylglycerol kinase catalytic domain CFLA_RS09475 PF00270 DEAD/DEAH box helicase CFLA_RS09475 PF00271 Helicase conserved C-terminal domain CFLA_RS09475 PF08148 DSHCT (NUC185) domain CFLA_RS09480 PF07969 Amidohydrolase family CFLA_RS09485 PF00795 Carbon-nitrogen hydrolase CFLA_RS09485 PF00535 Glycosyl transferase family 2 CFLA_RS09490 PF13397 RNA polymerase-binding protein CFLA_RS09495 PF00248 Aldo/keto reductase family CFLA_RS09510 PF00583 Acetyltransferase (GNAT) family CFLA_RS09525 PF13614 AAA domain CFLA_RS09530 PF13411 MerR HTH family regulatory protein CFLA_RS09535 PF02577 Bifunctional nuclease CFLA_RS09540 PF00376 MerR family regulatory protein CFLA_RS09545 PF00498 FHA domain CFLA_RS09550 PF05949 Bacterial protein of unknown function (DUF881) CFLA_RS09555 PF06947 Protein of unknown function (DUF1290) CFLA_RS09565 PF01066 CDP-alcohol phosphatidyltransferase CFLA_RS09575 PF00270 DEAD/DEAH box helicase CFLA_RS09575 PF00271 Helicase conserved C-terminal domain CFLA_RS09575 PF03880 DbpA RNA binding domain CFLA_RS09580 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS09585 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS09590 PF01341 Glycosyl hydrolases family 6 CFLA_RS09590 PF00553 Cellulose binding domain CFLA_RS09590 PF00041 Fibronectin type III domain CFLA_RS09595 PF00553 Cellulose binding domain CFLA_RS09595 PF00041 Fibronectin type III domain CFLA_RS09595 PF00150 Cellulase (glycosyl hydrolase family 5) CFLA_RS09600 PF01212 Beta-eliminating lyase CFLA_RS09610 PF00216 Bacterial DNA-binding protein CFLA_RS09615 PF02811 PHP domain CFLA_RS09615 PF14716 Helix-hairpin-helix domain CFLA_RS09615 PF14791 DNA polymerase beta thumb CFLA_RS09620 PF02735 Ku70/Ku80 beta-barrel domain CFLA_RS09625 PF04679 ATP dependent DNA ligase C terminal region CFLA_RS09625 PF13298 DNA polymerase Ligase (LigD) CFLA_RS09625 PF01068 ATP dependent DNA ligase domain CFLA_RS09630 PF00210 Ferritin-like domain CFLA_RS09650 PF06039 Malate:quinone oxidoreductase (Mqo) CFLA_RS09665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFLA_RS09665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFLA_RS09670 PF04542 Sigma-70 region 2 CFLA_RS09670 PF04545 Sigma-70, region 4 CFLA_RS09675 PF00248 Aldo/keto reductase family CFLA_RS09690 PF13085 2Fe-2S iron-sulfur cluster binding domain CFLA_RS09690 PF13183 4Fe-4S dicluster domain CFLA_RS09695 PF02910 Fumarate reductase flavoprotein C-term CFLA_RS09695 PF00890 FAD binding domain CFLA_RS09710 PF00582 Universal stress protein family CFLA_RS09745 PF01926 50S ribosome-binding GTPase CFLA_RS09745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CFLA_RS09755 PF02224 Cytidylate kinase CFLA_RS09760 PF02153 Prephenate dehydrogenase CFLA_RS09765 PF00849 RNA pseudouridylate synthase CFLA_RS09765 PF01479 S4 domain CFLA_RS09770 PF04079 Segregation and condensation complex subunit ScpB CFLA_RS09775 PF02616 Segregation and condensation protein ScpA CFLA_RS09780 PF13614 AAA domain CFLA_RS09785 PF02899 Phage integrase, N-terminal SAM-like domain CFLA_RS09785 PF00589 Phage integrase family CFLA_RS09790 PF01040 UbiA prenyltransferase family CFLA_RS09795 PF00456 Transketolase, thiamine diphosphate binding domain CFLA_RS09795 PF02779 Transketolase, pyrimidine binding domain CFLA_RS09795 PF02780 Transketolase, C-terminal domain CFLA_RS09800 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFLA_RS09805 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CFLA_RS09805 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CFLA_RS09815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CFLA_RS09825 PF03840 Preprotein translocase SecG subunit CFLA_RS09830 PF00121 Triosephosphate isomerase CFLA_RS09835 PF00162 Phosphoglycerate kinase CFLA_RS09840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFLA_RS09840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFLA_RS09845 PF10298 WhiA N-terminal LAGLIDADG-like domain CFLA_RS09845 PF14527 WhiA LAGLIDADG-like domain CFLA_RS09845 PF02650 WhiA C-terminal HTH domain CFLA_RS09850 PF01933 Uncharacterised protein family UPF0052 CFLA_RS09855 PF03668 P-loop ATPase protein family CFLA_RS09860 PF08459 UvrC Helix-hairpin-helix N-terminal CFLA_RS09860 PF01541 GIY-YIG catalytic domain CFLA_RS09860 PF02151 UvrB/uvrC motif CFLA_RS09870 PF17760 UvrA interaction domain CFLA_RS09870 PF17755 UvrA DNA-binding domain CFLA_RS09870 PF00005 ABC transporter CFLA_RS09875 PF00723 Glycosyl hydrolases family 15 CFLA_RS09880 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFLA_RS09880 PF00753 Metallo-beta-lactamase superfamily CFLA_RS09895 PF03741 Integral membrane protein TerC family CFLA_RS09905 PF02151 UvrB/uvrC motif CFLA_RS09905 PF00271 Helicase conserved C-terminal domain CFLA_RS09905 PF12344 Ultra-violet resistance protein B CFLA_RS09905 PF04851 Type III restriction enzyme, res subunit CFLA_RS09905 PF17757 UvrB interaction domain CFLA_RS09915 PF04229 GrpB protein CFLA_RS09915 PF01121 Dephospho-CoA kinase CFLA_RS09920 PF00575 S1 RNA binding domain CFLA_RS09925 PF00365 Phosphofructokinase CFLA_RS09930 PF00005 ABC transporter CFLA_RS09930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFLA_RS09935 PF12911 N-terminal TM domain of oligopeptide transport permease C CFLA_RS09935 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS09940 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS09945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFLA_RS09950 PF08241 Methyltransferase domain CFLA_RS09955 PF00474 Sodium:solute symporter family CFLA_RS09965 PF00476 DNA polymerase family A CFLA_RS09965 PF01367 5'-3' exonuclease, C-terminal SAM fold CFLA_RS09965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFLA_RS09970 PF03061 Thioesterase superfamily CFLA_RS09980 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS09985 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS09985 PF11862 Domain of unknown function (DUF3382) CFLA_RS09990 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFLA_RS09990 PF00005 ABC transporter CFLA_RS09995 PF00005 ABC transporter CFLA_RS10000 PF13458 Periplasmic binding protein CFLA_RS10005 PF00072 Response regulator receiver domain CFLA_RS10005 PF03861 ANTAR domain CFLA_RS10025 PF02887 Pyruvate kinase, alpha/beta domain CFLA_RS10025 PF00224 Pyruvate kinase, barrel domain CFLA_RS10030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFLA_RS10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS10035 PF00310 Glutamine amidotransferases class-II CFLA_RS10035 PF04898 Glutamate synthase central domain CFLA_RS10035 PF01645 Conserved region in glutamate synthase CFLA_RS10035 PF01493 GXGXG motif CFLA_RS10040 PF01790 Prolipoprotein diacylglyceryl transferase CFLA_RS10045 PF00290 Tryptophan synthase alpha chain CFLA_RS10050 PF00291 Pyridoxal-phosphate dependent enzyme CFLA_RS10055 PF00218 Indole-3-glycerol phosphate synthase CFLA_RS10085 PF00425 chorismate binding enzyme CFLA_RS10085 PF04715 Anthranilate synthase component I, N terminal region CFLA_RS10090 PF01502 Phosphoribosyl-AMP cyclohydrolase CFLA_RS10095 PF00664 ABC transporter transmembrane region CFLA_RS10095 PF00005 ABC transporter CFLA_RS10100 PF00005 ABC transporter CFLA_RS10100 PF00664 ABC transporter transmembrane region CFLA_RS10110 PF00977 Histidine biosynthesis protein CFLA_RS10120 PF03136 Pup-ligase protein CFLA_RS10125 PF00227 Proteasome subunit CFLA_RS10130 PF00227 Proteasome subunit CFLA_RS10135 PF05639 Pup-like protein CFLA_RS10140 PF03136 Pup-ligase protein CFLA_RS10145 PF16450 Proteasomal ATPase OB C-terminal domain CFLA_RS10145 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS10145 PF17758 Proteasomal ATPase OB N-terminal domain CFLA_RS10150 PF08704 tRNA methyltransferase complex GCD14 subunit CFLA_RS10155 PF00571 CBS domain CFLA_RS10155 PF02163 Peptidase family M50 CFLA_RS10165 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS10175 PF01406 tRNA synthetases class I (C) catalytic domain CFLA_RS10180 PF02673 Bacitracin resistance protein BacA CFLA_RS10185 PF00248 Aldo/keto reductase family CFLA_RS10200 PF07687 Peptidase dimerisation domain CFLA_RS10200 PF01546 Peptidase family M20/M25/M40 CFLA_RS10205 PF01432 Peptidase family M3 CFLA_RS10210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFLA_RS10210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFLA_RS10215 PF01037 Lrp/AsnC ligand binding domain CFLA_RS10235 PF00561 alpha/beta hydrolase fold CFLA_RS10240 PF11799 impB/mucB/samB family C-terminal domain CFLA_RS10240 PF00817 impB/mucB/samB family CFLA_RS10255 PF01594 AI-2E family transporter CFLA_RS10320 PF01336 OB-fold nucleic acid binding domain CFLA_RS10320 PF02811 PHP domain CFLA_RS10320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFLA_RS10320 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFLA_RS10320 PF14579 Helix-hairpin-helix motif CFLA_RS10340 PF01740 STAS domain CFLA_RS10340 PF00916 Sulfate permease family CFLA_RS10345 PF01161 Phosphatidylethanolamine-binding protein CFLA_RS10360 PF00588 SpoU rRNA Methylase family CFLA_RS10375 PF00664 ABC transporter transmembrane region CFLA_RS10375 PF00005 ABC transporter CFLA_RS10380 PF00005 ABC transporter CFLA_RS10380 PF00664 ABC transporter transmembrane region CFLA_RS10385 PF01145 SPFH domain / Band 7 family CFLA_RS10395 PF00005 ABC transporter CFLA_RS10405 PF00986 DNA gyrase B subunit, carboxyl terminus CFLA_RS10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS10405 PF00204 DNA gyrase B CFLA_RS10405 PF01751 Toprim domain CFLA_RS10415 PF04545 Sigma-70, region 4 CFLA_RS10415 PF04539 Sigma-70 region 3 CFLA_RS10415 PF00140 Sigma-70 factor, region 1.2 CFLA_RS10415 PF04542 Sigma-70 region 2 CFLA_RS10420 PF00582 Universal stress protein family CFLA_RS10435 PF00348 Polyprenyl synthetase CFLA_RS10445 PF01464 Transglycosylase SLT domain CFLA_RS10445 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CFLA_RS10450 PF03793 PASTA domain CFLA_RS10450 PF00069 Protein kinase domain CFLA_RS10455 PF01474 Class-II DAHP synthetase family CFLA_RS10460 PF00365 Phosphofructokinase CFLA_RS10475 PF00480 ROK family CFLA_RS10480 PF00501 AMP-binding enzyme CFLA_RS10485 PF01541 GIY-YIG catalytic domain CFLA_RS10485 PF00929 Exonuclease CFLA_RS10495 PF00591 Glycosyl transferase family, a/b domain CFLA_RS10495 PF02885 Glycosyl transferase family, helical bundle domain CFLA_RS10505 PF00510 Cytochrome c oxidase subunit III CFLA_RS10510 PF00034 Cytochrome c CFLA_RS10510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFLA_RS10515 PF00355 Rieske [2Fe-2S] domain CFLA_RS10520 PF13631 Cytochrome b(N-terminal)/b6/petB CFLA_RS10525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFLA_RS10525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFLA_RS10535 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFLA_RS10540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFLA_RS10545 PF00266 Aminotransferase class-V CFLA_RS10550 PF01521 Iron-sulphur cluster biosynthesis CFLA_RS10555 PF02595 Glycerate kinase family CFLA_RS10560 PF02445 Quinolinate synthetase A protein CFLA_RS10565 PF01965 DJ-1/PfpI family CFLA_RS10575 PF07687 Peptidase dimerisation domain CFLA_RS10575 PF01546 Peptidase family M20/M25/M40 CFLA_RS10580 PF11241 Protein of unknown function (DUF3043) CFLA_RS10600 PF00155 Aminotransferase class I and II CFLA_RS10610 PF01180 Dihydroorotate dehydrogenase CFLA_RS10625 PF02789 Cytosol aminopeptidase family, N-terminal domain CFLA_RS10625 PF00883 Cytosol aminopeptidase family, catalytic domain CFLA_RS10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS10635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFLA_RS10640 PF02817 e3 binding domain CFLA_RS10640 PF00364 Biotin-requiring enzyme CFLA_RS10640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFLA_RS10645 PF01370 NAD dependent epimerase/dehydratase family CFLA_RS10645 PF08338 Domain of unknown function (DUF1731) CFLA_RS10655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFLA_RS10655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFLA_RS10660 PF03176 MMPL family CFLA_RS10670 PF03099 Biotin/lipoate A/B protein ligase family CFLA_RS10680 PF04055 Radical SAM superfamily CFLA_RS10680 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CFLA_RS10685 PF13829 Domain of unknown function (DUF4191) CFLA_RS10695 PF03951 Glutamine synthetase, beta-Grasp domain CFLA_RS10695 PF00120 Glutamine synthetase, catalytic domain CFLA_RS10710 PF02634 FdhD/NarQ family CFLA_RS10715 PF00384 Molybdopterin oxidoreductase CFLA_RS10715 PF01568 Molydopterin dinucleotide binding domain CFLA_RS10725 PF08335 GlnD PII-uridylyltransferase CFLA_RS10725 PF03710 Glutamate-ammonia ligase adenylyltransferase CFLA_RS10730 PF00120 Glutamine synthetase, catalytic domain CFLA_RS10730 PF03951 Glutamine synthetase, beta-Grasp domain CFLA_RS10735 PF02548 Ketopantoate hydroxymethyltransferase CFLA_RS10740 PF00557 Metallopeptidase family M24 CFLA_RS10745 PF00480 ROK family CFLA_RS10760 PF00501 AMP-binding enzyme CFLA_RS10760 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS10770 PF00221 Aromatic amino acid lyase CFLA_RS10780 PF01070 FMN-dependent dehydrogenase CFLA_RS10785 PF00067 Cytochrome P450 CFLA_RS10790 PF00999 Sodium/hydrogen exchanger family CFLA_RS10795 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS10795 PF00072 Response regulator receiver domain CFLA_RS10800 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS10825 PF03883 Peroxide stress protein YaaA CFLA_RS10830 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS10835 PF02591 C4-type zinc ribbon domain CFLA_RS10840 PF01784 NIF3 (NGG1p interacting factor 3) CFLA_RS10845 PF00107 Zinc-binding dehydrogenase CFLA_RS10845 PF13823 Alcohol dehydrogenase GroES-associated CFLA_RS10845 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS10855 PF00578 AhpC/TSA family CFLA_RS10865 PF00456 Transketolase, thiamine diphosphate binding domain CFLA_RS10865 PF17831 Pyruvate dehydrogenase E1 component middle domain CFLA_RS10875 PF17853 GGDEF-like domain CFLA_RS10875 PF13556 PucR C-terminal helix-turn-helix domain CFLA_RS10880 PF00698 Acyl transferase domain CFLA_RS10885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFLA_RS10885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFLA_RS10890 PF00550 Phosphopantetheine attachment site CFLA_RS10895 PF02801 Beta-ketoacyl synthase, C-terminal domain CFLA_RS10895 PF00109 Beta-ketoacyl synthase, N-terminal domain CFLA_RS10905 PF00175 Oxidoreductase NAD-binding domain CFLA_RS10905 PF00970 Oxidoreductase FAD-binding domain CFLA_RS10905 PF00042 Globin CFLA_RS10920 PF01327 Polypeptide deformylase CFLA_RS10940 PF01569 PAP2 superfamily CFLA_RS10985 PF01841 Transglutaminase-like superfamily CFLA_RS10985 PF08379 Bacterial transglutaminase-like N-terminal region CFLA_RS10990 PF10410 DnaB-helicase binding domain of primase CFLA_RS10990 PF08275 DNA primase catalytic core, N-terminal domain CFLA_RS10990 PF08278 DNA primase DnaG DnaB-binding CFLA_RS10990 PF13662 Toprim domain CFLA_RS10990 PF01807 CHC2 zinc finger CFLA_RS10995 PF03795 YCII-related domain CFLA_RS11000 PF01966 HD domain CFLA_RS11000 PF13286 Phosphohydrolase-associated domain CFLA_RS11005 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS11010 PF14785 Maltose transport system permease protein MalF P2 domain CFLA_RS11010 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS11020 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS11025 PF00128 Alpha amylase, catalytic domain CFLA_RS11030 PF04107 Glutamate-cysteine ligase family 2(GCS2) CFLA_RS11035 PF08281 Sigma-70, region 4 CFLA_RS11035 PF04542 Sigma-70 region 2 CFLA_RS11045 PF01207 Dihydrouridine synthase (Dus) CFLA_RS11050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFLA_RS11050 PF03129 Anticodon binding domain CFLA_RS11055 PF01297 Zinc-uptake complex component A periplasmic CFLA_RS11060 PF00005 ABC transporter CFLA_RS11065 PF00950 ABC 3 transport family CFLA_RS11080 PF01255 Putative undecaprenyl diphosphate synthase CFLA_RS11085 PF02565 Recombination protein O C terminal CFLA_RS11085 PF11967 Recombination protein O N terminal CFLA_RS11090 PF08502 LeuA allosteric (dimerisation) domain CFLA_RS11090 PF00682 HMGL-like CFLA_RS11105 PF02909 Tetracyclin repressor-like, C-terminal domain CFLA_RS11105 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS11125 PF17863 AAA lid domain CFLA_RS11125 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS11135 PF13191 AAA ATPase domain CFLA_RS11135 PF00069 Protein kinase domain CFLA_RS11155 PF07650 KH domain CFLA_RS11155 PF01926 50S ribosome-binding GTPase CFLA_RS11160 PF03471 Transporter associated domain CFLA_RS11160 PF00571 CBS domain CFLA_RS11160 PF01595 Cyclin M transmembrane N-terminal domain CFLA_RS11165 PF02130 Uncharacterized protein family UPF0054 CFLA_RS11170 PF02562 PhoH-like protein CFLA_RS11175 PF02896 PEP-utilising enzyme, TIM barrel domain CFLA_RS11175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CFLA_RS11175 PF00391 PEP-utilising enzyme, mobile domain CFLA_RS11180 PF04452 RNA methyltransferase CFLA_RS11185 PF00226 DnaJ domain CFLA_RS11185 PF01556 DnaJ C terminal domain CFLA_RS11185 PF00684 DnaJ central domain CFLA_RS11190 PF08220 DeoR-like helix-turn-helix domain CFLA_RS11190 PF01628 HrcA protein C terminal domain CFLA_RS11215 PF04055 Radical SAM superfamily CFLA_RS11220 PF00009 Elongation factor Tu GTP binding domain CFLA_RS11220 PF00679 Elongation factor G C-terminus CFLA_RS11220 PF06421 GTP-binding protein LepA C-terminus CFLA_RS11230 PF08241 Methyltransferase domain CFLA_RS11235 PF01841 Transglutaminase-like superfamily CFLA_RS11235 PF08379 Bacterial transglutaminase-like N-terminal region CFLA_RS11245 PF04174 A circularly permuted ATPgrasp CFLA_RS11255 PF01649 Ribosomal protein S20 CFLA_RS11285 PF10531 SLBB domain CFLA_RS11300 PF02645 Uncharacterised protein, DegV family COG1307 CFLA_RS11305 PF13603 Leucyl-tRNA synthetase, Domain 2 CFLA_RS11305 PF08264 Anticodon-binding domain of tRNA CFLA_RS11305 PF09334 tRNA synthetases class I (M) CFLA_RS11310 PF05872 Bacterial protein of unknown function (DUF853) CFLA_RS11330 PF00296 Luciferase-like monooxygenase CFLA_RS11340 PF13409 Glutathione S-transferase, N-terminal domain CFLA_RS11350 PF00271 Helicase conserved C-terminal domain CFLA_RS11350 PF00270 DEAD/DEAH box helicase CFLA_RS11355 PF08281 Sigma-70, region 4 CFLA_RS11355 PF12680 SnoaL-like domain CFLA_RS11355 PF04542 Sigma-70 region 2 CFLA_RS11365 PF00293 NUDIX domain CFLA_RS11365 PF13344 Haloacid dehalogenase-like hydrolase CFLA_RS11370 PF01434 Peptidase family M41 CFLA_RS11370 PF17862 AAA+ lid domain CFLA_RS11370 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS11375 PF00311 Phosphoenolpyruvate carboxylase CFLA_RS11425 PF17758 Proteasomal ATPase OB N-terminal domain CFLA_RS11425 PF16450 Proteasomal ATPase OB C-terminal domain CFLA_RS11425 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS11520 PF01467 Cytidylyltransferase-like CFLA_RS11525 PF00171 Aldehyde dehydrogenase family CFLA_RS11530 PF00696 Amino acid kinase family CFLA_RS11530 PF01472 PUA domain CFLA_RS11535 PF09269 Domain of unknown function (DUF1967) CFLA_RS11535 PF01018 GTP1/OBG CFLA_RS11535 PF01926 50S ribosome-binding GTPase CFLA_RS11540 PF01016 Ribosomal L27 protein CFLA_RS11545 PF00829 Ribosomal prokaryotic L21 protein CFLA_RS11550 PF10150 Ribonuclease E/G family CFLA_RS11555 PF01654 Cytochrome bd terminal oxidase subunit I CFLA_RS11560 PF02322 Cytochrome bd terminal oxidase subunit II CFLA_RS11565 PF00664 ABC transporter transmembrane region CFLA_RS11565 PF00005 ABC transporter CFLA_RS11570 PF00664 ABC transporter transmembrane region CFLA_RS11570 PF00005 ABC transporter CFLA_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS11575 PF13185 GAF domain CFLA_RS11575 PF07730 Histidine kinase CFLA_RS11580 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS11580 PF00072 Response regulator receiver domain CFLA_RS11585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFLA_RS11585 PF01842 ACT domain CFLA_RS11585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFLA_RS11590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFLA_RS11590 PF06827 Zinc finger found in FPG and IleRS CFLA_RS11590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFLA_RS11595 PF14622 Ribonuclease-III-like CFLA_RS11595 PF00035 Double-stranded RNA binding motif CFLA_RS11600 PF01783 Ribosomal L32p protein family CFLA_RS11605 PF02620 Large ribosomal RNA subunit accumulation protein YceD CFLA_RS11615 PF01467 Cytidylyltransferase-like CFLA_RS11620 PF00583 Acetyltransferase (GNAT) family CFLA_RS11630 PF03435 Saccharopine dehydrogenase NADP binding domain CFLA_RS11645 PF00005 ABC transporter CFLA_RS11650 PF17191 RecG wedge domain CFLA_RS11650 PF00271 Helicase conserved C-terminal domain CFLA_RS11650 PF00270 DEAD/DEAH box helicase CFLA_RS11660 PF00830 Ribosomal L28 family CFLA_RS11670 PF02769 AIR synthase related protein, C-terminal domain CFLA_RS11670 PF00586 AIR synthase related protein, N-terminal domain CFLA_RS11680 PF07478 D-ala D-ala ligase C-terminus CFLA_RS11680 PF01820 D-ala D-ala ligase N-terminus CFLA_RS11685 PF01053 Cys/Met metabolism PLP-dependent enzyme CFLA_RS11690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CFLA_RS11690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CFLA_RS11700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFLA_RS11705 PF00694 Aconitase C-terminal domain CFLA_RS11710 PF00330 Aconitase family (aconitate hydratase) CFLA_RS11715 PF01614 Bacterial transcriptional regulator CFLA_RS11715 PF09339 IclR helix-turn-helix domain CFLA_RS11765 PF01043 SecA preprotein cross-linking domain CFLA_RS11765 PF07516 SecA Wing and Scaffold domain CFLA_RS11765 PF07517 SecA DEAD-like domain CFLA_RS11770 PF06224 Winged helix DNA-binding domain CFLA_RS11775 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS11775 PF00331 Glycosyl hydrolase family 10 CFLA_RS11780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFLA_RS11780 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CFLA_RS11785 PF00156 Phosphoribosyl transferase domain CFLA_RS11795 PF00672 HAMP domain CFLA_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS11795 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS11800 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS11800 PF00072 Response regulator receiver domain CFLA_RS11815 PF14258 Domain of unknown function (DUF4350) CFLA_RS11820 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS11820 PF17863 AAA lid domain CFLA_RS11840 PF03966 Trm112p-like protein CFLA_RS11875 PF02467 Transcription factor WhiB CFLA_RS11885 PF00483 Nucleotidyl transferase CFLA_RS11890 PF04321 RmlD substrate binding domain CFLA_RS11895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFLA_RS11915 PF00535 Glycosyl transferase family 2 CFLA_RS11940 PF00535 Glycosyl transferase family 2 CFLA_RS11970 PF16363 GDP-mannose 4,6 dehydratase CFLA_RS11975 PF16363 GDP-mannose 4,6 dehydratase CFLA_RS11995 PF01061 ABC-2 type transporter CFLA_RS12000 PF14524 Wzt C-terminal domain CFLA_RS12000 PF00005 ABC transporter CFLA_RS12010 PF13439 Glycosyltransferase Family 4 CFLA_RS12010 PF00534 Glycosyl transferases group 1 CFLA_RS12020 PF01040 UbiA prenyltransferase family CFLA_RS12025 PF01569 PAP2 superfamily CFLA_RS12050 PF16363 GDP-mannose 4,6 dehydratase CFLA_RS12055 PF03816 Cell envelope-related transcriptional attenuator domain CFLA_RS12060 PF03816 Cell envelope-related transcriptional attenuator domain CFLA_RS12065 PF00731 AIR carboxylase CFLA_RS12070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CFLA_RS12070 PF02222 ATP-grasp domain CFLA_RS12075 PF01238 Phosphomannose isomerase type I CFLA_RS12080 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS12080 PF00672 HAMP domain CFLA_RS12085 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS12085 PF00072 Response regulator receiver domain CFLA_RS12090 PF07730 Histidine kinase CFLA_RS12095 PF00072 Response regulator receiver domain CFLA_RS12095 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS12100 PF00005 ABC transporter CFLA_RS12100 PF02687 FtsX-like permease family CFLA_RS12100 PF12704 MacB-like periplasmic core domain CFLA_RS12110 PF01580 FtsK/SpoIIIE family CFLA_RS12110 PF12538 DNA transporter CFLA_RS12120 PF02467 Transcription factor WhiB CFLA_RS12125 PF07568 Histidine kinase CFLA_RS12125 PF12282 Signal transduction histidine kinase CFLA_RS12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS12150 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS12160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFLA_RS12160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFLA_RS12170 PF06778 Chlorite dismutase CFLA_RS12175 PF00762 Ferrochelatase CFLA_RS12180 PF00069 Protein kinase domain CFLA_RS12205 PF01230 HIT domain CFLA_RS12210 PF06965 Na+/H+ antiporter 1 CFLA_RS12215 PF00106 short chain dehydrogenase CFLA_RS12220 PF06965 Na+/H+ antiporter 1 CFLA_RS12220 PF13462 Thioredoxin CFLA_RS12230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFLA_RS12230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFLA_RS12235 PF06029 AlkA N-terminal domain CFLA_RS12235 PF00730 HhH-GPD superfamily base excision DNA repair protein CFLA_RS12235 PF12833 Helix-turn-helix domain CFLA_RS12235 PF02805 Metal binding domain of Ada CFLA_RS12250 PF00689 Cation transporting ATPase, C-terminus CFLA_RS12250 PF00690 Cation transporter/ATPase, N-terminus CFLA_RS12270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS12270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFLA_RS12275 PF03009 Glycerophosphoryl diester phosphodiesterase family CFLA_RS12280 PF17946 RecC C-terminal domain CFLA_RS12285 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12285 PF12705 PD-(D/E)XK nuclease superfamily CFLA_RS12285 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12290 PF13538 UvrD-like helicase C-terminal domain CFLA_RS12310 PF00665 Integrase core domain CFLA_RS12310 PF13936 Helix-turn-helix domain CFLA_RS12335 PF01475 Ferric uptake regulator family CFLA_RS12340 PF00171 Aldehyde dehydrogenase family CFLA_RS12350 PF05661 Protein of unknown function (DUF808) CFLA_RS12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFLA_RS12375 PF03466 LysR substrate binding domain CFLA_RS12380 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CFLA_RS12395 PF08924 Domain of unknown function (DUF1906) CFLA_RS12395 PF01471 Putative peptidoglycan binding domain CFLA_RS12400 PF08924 Domain of unknown function (DUF1906) CFLA_RS12400 PF01471 Putative peptidoglycan binding domain CFLA_RS12410 PF00005 ABC transporter CFLA_RS12410 PF02687 FtsX-like permease family CFLA_RS12410 PF12704 MacB-like periplasmic core domain CFLA_RS12430 PF00892 EamA-like transporter family CFLA_RS12435 PF03699 Uncharacterised protein family (UPF0182) CFLA_RS12445 PF13180 PDZ domain CFLA_RS12445 PF05362 Lon protease (S16) C-terminal proteolytic domain CFLA_RS12470 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12470 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12470 PF00570 HRDC domain CFLA_RS12475 PF00462 Glutaredoxin CFLA_RS12480 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CFLA_RS12480 PF09297 NADH pyrophosphatase zinc ribbon domain CFLA_RS12480 PF00293 NUDIX domain CFLA_RS12490 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12490 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12490 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12490 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12495 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12495 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12515 PF00271 Helicase conserved C-terminal domain CFLA_RS12515 PF00270 DEAD/DEAH box helicase CFLA_RS12520 PF01914 MarC family integral membrane protein CFLA_RS12525 PF02811 PHP domain CFLA_RS12530 PF00557 Metallopeptidase family M24 CFLA_RS12530 PF05195 Aminopeptidase P, N-terminal domain CFLA_RS12540 PF03448 MgtE intracellular N domain CFLA_RS12540 PF01769 Divalent cation transporter CFLA_RS12540 PF00571 CBS domain CFLA_RS12555 PF01883 Iron-sulfur cluster assembly protein CFLA_RS12555 PF10609 NUBPL iron-transfer P-loop NTPase CFLA_RS12560 PF00331 Glycosyl hydrolase family 10 CFLA_RS12560 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS12565 PF00331 Glycosyl hydrolase family 10 CFLA_RS12565 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS12570 PF00455 DeoR C terminal sensor domain CFLA_RS12570 PF08220 DeoR-like helix-turn-helix domain CFLA_RS12575 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CFLA_RS12575 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CFLA_RS12580 PF08544 GHMP kinases C terminal CFLA_RS12580 PF00288 GHMP kinases N terminal domain CFLA_RS12580 PF10509 Galactokinase galactose-binding signature CFLA_RS12590 PF00005 ABC transporter CFLA_RS12590 PF02687 FtsX-like permease family CFLA_RS12590 PF12704 MacB-like periplasmic core domain CFLA_RS12595 PF12704 MacB-like periplasmic core domain CFLA_RS12595 PF00005 ABC transporter CFLA_RS12595 PF02687 FtsX-like permease family CFLA_RS12610 PF00005 ABC transporter CFLA_RS12610 PF12704 MacB-like periplasmic core domain CFLA_RS12610 PF02687 FtsX-like permease family CFLA_RS12615 PF12704 MacB-like periplasmic core domain CFLA_RS12615 PF02687 FtsX-like permease family CFLA_RS12630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFLA_RS12630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFLA_RS12635 PF00464 Serine hydroxymethyltransferase CFLA_RS12650 PF04545 Sigma-70, region 4 CFLA_RS12650 PF04542 Sigma-70 region 2 CFLA_RS12660 PF04545 Sigma-70, region 4 CFLA_RS12660 PF04542 Sigma-70 region 2 CFLA_RS12670 PF00551 Formyl transferase CFLA_RS12675 PF10503 Esterase PHB depolymerase CFLA_RS12685 PF00005 ABC transporter CFLA_RS12690 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFLA_RS12690 PF00480 ROK family CFLA_RS12695 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS12700 PF00005 ABC transporter CFLA_RS12705 PF13407 Periplasmic binding protein domain CFLA_RS12710 PF00005 ABC transporter CFLA_RS12715 PF00480 ROK family CFLA_RS12720 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS12725 PF00005 ABC transporter CFLA_RS12730 PF13407 Periplasmic binding protein domain CFLA_RS12735 PF00128 Alpha amylase, catalytic domain CFLA_RS12735 PF02806 Alpha amylase, C-terminal all-beta domain CFLA_RS12735 PF03714 Bacterial pullanase-associated domain CFLA_RS12740 PF00056 lactate/malate dehydrogenase, NAD binding domain CFLA_RS12740 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFLA_RS12770 PF00180 Isocitrate/isopropylmalate dehydrogenase CFLA_RS12775 PF00230 Major intrinsic protein CFLA_RS12785 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS12785 PF14759 Reductase C-terminal CFLA_RS12790 PF01808 AICARFT/IMPCHase bienzyme CFLA_RS12790 PF02142 MGS-like domain CFLA_RS12795 PF00551 Formyl transferase CFLA_RS12810 PF00549 CoA-ligase CFLA_RS12810 PF02629 CoA binding domain CFLA_RS12815 PF00549 CoA-ligase CFLA_RS12815 PF08442 ATP-grasp domain CFLA_RS12825 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS12825 PF13361 UvrD-like helicase C-terminal domain CFLA_RS12845 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS12845 PF00072 Response regulator receiver domain CFLA_RS12870 PF13439 Glycosyltransferase Family 4 CFLA_RS12870 PF00534 Glycosyl transferases group 1 CFLA_RS12885 PF02540 NAD synthase CFLA_RS12885 PF00117 Glutamine amidotransferase class-I CFLA_RS12885 PF00958 GMP synthase C terminal domain CFLA_RS12945 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS12945 PF00072 Response regulator receiver domain CFLA_RS12965 PF00437 Type II/IV secretion system protein CFLA_RS12995 PF00005 ABC transporter CFLA_RS12995 PF00664 ABC transporter transmembrane region CFLA_RS13000 PF00664 ABC transporter transmembrane region CFLA_RS13000 PF00005 ABC transporter CFLA_RS13010 PF09364 XFP N-terminal domain CFLA_RS13010 PF09363 XFP C-terminal domain CFLA_RS13010 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CFLA_RS13015 PF01515 Phosphate acetyl/butaryl transferase CFLA_RS13015 PF07085 DRTGG domain CFLA_RS13020 PF00871 Acetokinase family CFLA_RS13025 PF00171 Aldehyde dehydrogenase family CFLA_RS13035 PF01032 FecCD transport family CFLA_RS13040 PF01032 FecCD transport family CFLA_RS13045 PF00005 ABC transporter CFLA_RS13050 PF00478 IMP dehydrogenase / GMP reductase domain CFLA_RS13055 PF00478 IMP dehydrogenase / GMP reductase domain CFLA_RS13055 PF00571 CBS domain CFLA_RS13060 PF00072 Response regulator receiver domain CFLA_RS13060 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS13065 PF02607 B12 binding domain CFLA_RS13065 PF13411 MerR HTH family regulatory protein CFLA_RS13065 PF02310 B12 binding domain CFLA_RS13070 PF02467 Transcription factor WhiB CFLA_RS13075 PF00166 Chaperonin 10 Kd subunit CFLA_RS13080 PF18096 THUMP domain-like CFLA_RS13085 PF04107 Glutamate-cysteine ligase family 2(GCS2) CFLA_RS13100 PF00814 Glycoprotease family CFLA_RS13105 PF00881 Nitroreductase family CFLA_RS13110 PF00581 Rhodanese-like domain CFLA_RS13120 PF00814 Glycoprotease family CFLA_RS13125 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CFLA_RS13130 PF00842 Alanine racemase, C-terminal domain CFLA_RS13130 PF01168 Alanine racemase, N-terminal domain CFLA_RS13140 PF03853 YjeF-related protein N-terminus CFLA_RS13140 PF01256 Carbohydrate kinase CFLA_RS13145 PF00296 Luciferase-like monooxygenase CFLA_RS13150 PF01648 4'-phosphopantetheinyl transferase superfamily CFLA_RS13155 PF01380 SIS domain CFLA_RS13160 PF00485 Phosphoribulokinase / Uridine kinase family CFLA_RS13180 PF01327 Polypeptide deformylase CFLA_RS13185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFLA_RS13185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFLA_RS13185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFLA_RS13185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFLA_RS13190 PF00380 Ribosomal protein S9/S16 CFLA_RS13195 PF00572 Ribosomal protein L13 CFLA_RS13200 PF12848 ABC transporter CFLA_RS13200 PF16326 ABC transporter C-terminal domain CFLA_RS13200 PF00005 ABC transporter CFLA_RS13205 PF00535 Glycosyl transferase family 2 CFLA_RS13205 PF07238 PilZ domain CFLA_RS13205 PF03170 Bacterial cellulose synthase subunit CFLA_RS13205 PF03552 Cellulose synthase CFLA_RS13210 PF01740 STAS domain CFLA_RS13220 PF07228 Stage II sporulation protein E (SpoIIE) CFLA_RS13220 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CFLA_RS13230 PF01416 tRNA pseudouridine synthase CFLA_RS13235 PF00480 ROK family CFLA_RS13255 PF01196 Ribosomal protein L17 CFLA_RS13260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CFLA_RS13260 PF01000 RNA polymerase Rpb3/RpoA insert domain CFLA_RS13260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CFLA_RS13265 PF00411 Ribosomal protein S11 CFLA_RS13270 PF00416 Ribosomal protein S13/S18 CFLA_RS13275 PF00444 Ribosomal protein L36 CFLA_RS13280 PF01176 Translation initiation factor 1A / IF-1 CFLA_RS13285 PF00557 Metallopeptidase family M24 CFLA_RS13295 PF00344 SecY translocase CFLA_RS13330 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CFLA_RS13335 PF00327 Ribosomal protein L30p/L7e CFLA_RS13340 PF03719 Ribosomal protein S5, C-terminal domain CFLA_RS13340 PF00333 Ribosomal protein S5, N-terminal domain CFLA_RS13345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CFLA_RS13350 PF00347 Ribosomal protein L6 CFLA_RS13355 PF00410 Ribosomal protein S8 CFLA_RS13360 PF00253 Ribosomal protein S14p/S29e CFLA_RS13365 PF00281 Ribosomal protein L5 CFLA_RS13365 PF00673 ribosomal L5P family C-terminus CFLA_RS13370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CFLA_RS13375 PF00238 Ribosomal protein L14p/L23e CFLA_RS13380 PF00366 Ribosomal protein S17 CFLA_RS13385 PF00831 Ribosomal L29 protein CFLA_RS13390 PF00252 Ribosomal protein L16p/L10e CFLA_RS13395 PF07650 KH domain CFLA_RS13395 PF00189 Ribosomal protein S3, C-terminal domain CFLA_RS13400 PF00237 Ribosomal protein L22p/L17e CFLA_RS13405 PF00203 Ribosomal protein S19 CFLA_RS13410 PF03947 Ribosomal Proteins L2, C-terminal domain CFLA_RS13410 PF00181 Ribosomal Proteins L2, RNA binding domain CFLA_RS13415 PF00276 Ribosomal protein L23 CFLA_RS13420 PF00573 Ribosomal protein L4/L1 family CFLA_RS13425 PF00297 Ribosomal protein L3 CFLA_RS13430 PF00338 Ribosomal protein S10p/S20e CFLA_RS13435 PF03143 Elongation factor Tu C-terminal domain CFLA_RS13435 PF03144 Elongation factor Tu domain 2 CFLA_RS13435 PF00009 Elongation factor Tu GTP binding domain CFLA_RS13440 PF14492 Elongation Factor G, domain II CFLA_RS13440 PF00679 Elongation factor G C-terminus CFLA_RS13440 PF03144 Elongation factor Tu domain 2 CFLA_RS13440 PF03764 Elongation factor G, domain IV CFLA_RS13440 PF00009 Elongation factor Tu GTP binding domain CFLA_RS13445 PF00177 Ribosomal protein S7p/S5e CFLA_RS13450 PF00164 Ribosomal protein S12/S23 CFLA_RS13460 PF04998 RNA polymerase Rpb1, domain 5 CFLA_RS13460 PF04997 RNA polymerase Rpb1, domain 1 CFLA_RS13460 PF05000 RNA polymerase Rpb1, domain 4 CFLA_RS13460 PF04983 RNA polymerase Rpb1, domain 3 CFLA_RS13460 PF00623 RNA polymerase Rpb1, domain 2 CFLA_RS13465 PF04563 RNA polymerase beta subunit CFLA_RS13465 PF04565 RNA polymerase Rpb2, domain 3 CFLA_RS13465 PF10385 RNA polymerase beta subunit external 1 domain CFLA_RS13465 PF00562 RNA polymerase Rpb2, domain 6 CFLA_RS13465 PF04560 RNA polymerase Rpb2, domain 7 CFLA_RS13465 PF04561 RNA polymerase Rpb2, domain 2 CFLA_RS13470 PF16320 Ribosomal protein L7/L12 dimerisation domain CFLA_RS13470 PF00542 Ribosomal protein L7/L12 C-terminal domain CFLA_RS13475 PF00466 Ribosomal protein L10 CFLA_RS13505 PF00687 Ribosomal protein L1p/L10e family CFLA_RS13510 PF03946 Ribosomal protein L11, N-terminal domain CFLA_RS13510 PF00298 Ribosomal protein L11, RNA binding domain CFLA_RS13515 PF02357 Transcription termination factor nusG CFLA_RS13520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CFLA_RS13530 PF00155 Aminotransferase class I and II CFLA_RS13535 PF00005 ABC transporter CFLA_RS13550 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS13550 PF00072 Response regulator receiver domain CFLA_RS13555 PF18719 ArlS sensor domain CFLA_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS13555 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS13560 PF00072 Response regulator receiver domain CFLA_RS13560 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS13565 PF00962 Adenosine/AMP deaminase CFLA_RS13580 PF01565 FAD binding domain CFLA_RS13580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CFLA_RS13590 PF07690 Major Facilitator Superfamily CFLA_RS13595 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS13605 PF13452 N-terminal half of MaoC dehydratase CFLA_RS13610 PF00471 Ribosomal protein L33 CFLA_RS13635 PF04461 Protein of unknown function (DUF520) CFLA_RS13640 PF01435 Peptidase family M48 CFLA_RS13645 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS13650 PF00892 EamA-like transporter family CFLA_RS13665 PF00348 Polyprenyl synthetase CFLA_RS13670 PF00361 Proton-conducting membrane transporter CFLA_RS13675 PF00361 Proton-conducting membrane transporter CFLA_RS13680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFLA_RS13680 PF00361 Proton-conducting membrane transporter CFLA_RS13685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFLA_RS13695 PF12838 4Fe-4S dicluster domain CFLA_RS13700 PF00146 NADH dehydrogenase CFLA_RS13705 PF00384 Molybdopterin oxidoreductase CFLA_RS13705 PF01568 Molydopterin dinucleotide binding domain CFLA_RS13705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFLA_RS13710 PF10531 SLBB domain CFLA_RS13710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFLA_RS13710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFLA_RS13720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CFLA_RS13725 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CFLA_RS13730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFLA_RS13735 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CFLA_RS13740 PF01494 FAD binding domain CFLA_RS13745 PF01209 ubiE/COQ5 methyltransferase family CFLA_RS13755 PF00425 chorismate binding enzyme CFLA_RS13760 PF13180 PDZ domain CFLA_RS13765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFLA_RS13770 PF13378 Enolase C-terminal domain-like CFLA_RS13770 PF18374 Enolase N-terminal domain-like CFLA_RS13775 PF00378 Enoyl-CoA hydratase/isomerase CFLA_RS13790 PF00501 AMP-binding enzyme CFLA_RS13790 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS13795 PF01040 UbiA prenyltransferase family CFLA_RS13810 PF01578 Cytochrome C assembly protein CFLA_RS13815 PF05140 ResB-like family CFLA_RS13820 PF02683 Cytochrome C biogenesis protein transmembrane region CFLA_RS13830 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS13840 PF04264 YceI-like domain CFLA_RS13845 PF02629 CoA binding domain CFLA_RS13845 PF06971 Putative DNA-binding protein N-terminus CFLA_RS13865 PF16499 Alpha galactosidase A CFLA_RS13865 PF17801 Alpha galactosidase C-terminal beta sandwich domain CFLA_RS13870 PF12728 Helix-turn-helix domain CFLA_RS13875 PF00850 Histone deacetylase domain CFLA_RS13880 PF02386 Cation transport protein CFLA_RS13885 PF02254 TrkA-N domain CFLA_RS13885 PF02080 TrkA-C domain CFLA_RS13890 PF03976 Polyphosphate kinase 2 (PPK2) CFLA_RS13910 PF11762 L-arabinose isomerase C-terminal domain CFLA_RS13910 PF02610 L-arabinose isomerase CFLA_RS13915 PF00596 Class II Aldolase and Adducin N-terminal domain CFLA_RS13930 PF03807 NADP oxidoreductase coenzyme F420-dependent CFLA_RS13930 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFLA_RS13935 PF17827 PrmC N-terminal domain CFLA_RS13935 PF05175 Methyltransferase small domain CFLA_RS13950 PF03030 Inorganic H+ pyrophosphatase CFLA_RS13955 PF01740 STAS domain CFLA_RS13960 PF04542 Sigma-70 region 2 CFLA_RS13960 PF04545 Sigma-70, region 4 CFLA_RS14000 PF02626 Carboxyltransferase domain, subdomain A and B CFLA_RS14005 PF03746 LamB/YcsF family CFLA_RS14010 PF00270 DEAD/DEAH box helicase CFLA_RS14010 PF09369 Domain of unknown function (DUF1998) CFLA_RS14010 PF00271 Helicase conserved C-terminal domain CFLA_RS14045 PF00437 Type II/IV secretion system protein CFLA_RS14055 PF03069 Acetamidase/Formamidase family CFLA_RS14060 PF01425 Amidase CFLA_RS14070 PF00576 HIUase/Transthyretin family CFLA_RS14075 PF01014 Uricase CFLA_RS14080 PF01979 Amidohydrolase family CFLA_RS14085 PF00266 Aminotransferase class-V CFLA_RS14090 PF07687 Peptidase dimerisation domain CFLA_RS14090 PF01546 Peptidase family M20/M25/M40 CFLA_RS14105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CFLA_RS14105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CFLA_RS14125 PF13478 XdhC Rossmann domain CFLA_RS14125 PF02625 XdhC and CoxI family CFLA_RS14130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFLA_RS14135 PF09084 NMT1/THI5 like CFLA_RS14140 PF00005 ABC transporter CFLA_RS14150 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS14175 PF00390 Malic enzyme, N-terminal domain CFLA_RS14175 PF03949 Malic enzyme, NAD binding domain CFLA_RS14180 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS14205 PF16177 Acetyl-coenzyme A synthetase N-terminus CFLA_RS14205 PF13193 AMP-binding enzyme C-terminal domain CFLA_RS14205 PF00501 AMP-binding enzyme CFLA_RS14210 PF00150 Cellulase (glycosyl hydrolase family 5) CFLA_RS14210 PF02013 Cellulose or protein binding domain CFLA_RS14225 PF00583 Acetyltransferase (GNAT) family CFLA_RS14230 PF13089 Polyphosphate kinase N-terminal domain CFLA_RS14230 PF02503 Polyphosphate kinase middle domain CFLA_RS14230 PF17941 Polyphosphate kinase C-terminal domain 1 CFLA_RS14230 PF13090 Polyphosphate kinase C-terminal domain 2 CFLA_RS14235 PF00300 Histidine phosphatase superfamily (branch 1) CFLA_RS14235 PF00293 NUDIX domain CFLA_RS14240 PF01384 Phosphate transporter family CFLA_RS14255 PF00083 Sugar (and other) transporter CFLA_RS14260 PF07690 Major Facilitator Superfamily CFLA_RS14275 PF01641 SelR domain CFLA_RS14280 PF00563 EAL domain CFLA_RS14280 PF03707 Bacterial signalling protein N terminal repeat CFLA_RS14280 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS14305 PF03358 NADPH-dependent FMN reductase CFLA_RS14325 PF00248 Aldo/keto reductase family CFLA_RS14335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFLA_RS14335 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS14360 PF03795 YCII-related domain CFLA_RS14365 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS14365 PF00072 Response regulator receiver domain CFLA_RS14370 PF07730 Histidine kinase CFLA_RS14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS14385 PF00005 ABC transporter CFLA_RS14395 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS14395 PF03664 Glycosyl hydrolase family 62 CFLA_RS14410 PF00106 short chain dehydrogenase CFLA_RS14425 PF00580 UvrD/REP helicase N-terminal domain CFLA_RS14425 PF13361 UvrD-like helicase C-terminal domain CFLA_RS14425 PF00570 HRDC domain CFLA_RS14460 PF00795 Carbon-nitrogen hydrolase CFLA_RS14460 PF02540 NAD synthase CFLA_RS14465 PF00293 NUDIX domain CFLA_RS14465 PF03099 Biotin/lipoate A/B protein ligase family CFLA_RS14470 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFLA_RS14470 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFLA_RS14475 PF03006 Haemolysin-III related CFLA_RS14515 PF00156 Phosphoribosyl transferase domain CFLA_RS14525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFLA_RS14535 PF00583 Acetyltransferase (GNAT) family CFLA_RS14550 PF01226 Formate/nitrite transporter CFLA_RS14570 PF02719 Polysaccharide biosynthesis protein CFLA_RS14575 PF03473 MOSC domain CFLA_RS14575 PF03475 3-alpha domain CFLA_RS14580 PF04264 YceI-like domain CFLA_RS14585 PF00072 Response regulator receiver domain CFLA_RS14585 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS14595 PF01040 UbiA prenyltransferase family CFLA_RS14600 PF01040 UbiA prenyltransferase family CFLA_RS14610 PF01593 Flavin containing amine oxidoreductase CFLA_RS14625 PF01370 NAD dependent epimerase/dehydratase family CFLA_RS14640 PF03466 LysR substrate binding domain CFLA_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFLA_RS14645 PF02983 Alpha-lytic protease prodomain CFLA_RS14650 PF01545 Cation efflux family CFLA_RS14705 PF00586 AIR synthase related protein, N-terminal domain CFLA_RS14705 PF02769 AIR synthase related protein, C-terminal domain CFLA_RS14710 PF00156 Phosphoribosyl transferase domain CFLA_RS14725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFLA_RS14725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFLA_RS14730 PF01341 Glycosyl hydrolases family 6 CFLA_RS14730 PF00553 Cellulose binding domain CFLA_RS14735 PF00553 Cellulose binding domain CFLA_RS14735 PF01341 Glycosyl hydrolases family 6 CFLA_RS14740 PF02557 D-alanyl-D-alanine carboxypeptidase CFLA_RS14745 PF17876 Cold shock domain CFLA_RS14745 PF00773 RNB domain CFLA_RS14745 PF00575 S1 RNA binding domain CFLA_RS14745 PF08461 Ribonuclease R winged-helix domain CFLA_RS14745 PF08206 Ribonuclease B OB domain CFLA_RS14750 PF04324 BFD-like [2Fe-2S] binding domain CFLA_RS14750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFLA_RS14750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS14750 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFLA_RS14750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFLA_RS14750 PF13806 Rieske-like [2Fe-2S] domain CFLA_RS14755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFLA_RS14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS14755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFLA_RS14755 PF04324 BFD-like [2Fe-2S] binding domain CFLA_RS14755 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFLA_RS14760 PF03358 NADPH-dependent FMN reductase CFLA_RS14770 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CFLA_RS14770 PF00586 AIR synthase related protein, N-terminal domain CFLA_RS14770 PF02769 AIR synthase related protein, C-terminal domain CFLA_RS14785 PF18011 C-terminal domain found in long catalases CFLA_RS14785 PF00199 Catalase CFLA_RS14785 PF06628 Catalase-related immune-responsive CFLA_RS14795 PF00561 alpha/beta hydrolase fold CFLA_RS14805 PF08543 Phosphomethylpyrimidine kinase CFLA_RS14840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFLA_RS14840 PF02770 Acyl-CoA dehydrogenase, middle domain CFLA_RS14840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFLA_RS14845 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS14850 PF02803 Thiolase, C-terminal domain CFLA_RS14850 PF00108 Thiolase, N-terminal domain CFLA_RS14860 PF01575 MaoC like domain CFLA_RS14875 PF00266 Aminotransferase class-V CFLA_RS14880 PF01402 Ribbon-helix-helix protein, copG family CFLA_RS14895 PF00581 Rhodanese-like domain CFLA_RS14900 PF01053 Cys/Met metabolism PLP-dependent enzyme CFLA_RS14910 PF00248 Aldo/keto reductase family CFLA_RS14940 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CFLA_RS14945 PF07969 Amidohydrolase family CFLA_RS14950 PF01223 DNA/RNA non-specific endonuclease CFLA_RS14955 PF01259 SAICAR synthetase CFLA_RS14960 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS14960 PF17862 AAA+ lid domain CFLA_RS14960 PF01434 Peptidase family M41 CFLA_RS14965 PF02844 Phosphoribosylglycinamide synthetase, N domain CFLA_RS14965 PF02843 Phosphoribosylglycinamide synthetase, C domain CFLA_RS14965 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFLA_RS14980 PF00709 Adenylosuccinate synthetase CFLA_RS14995 PF07228 Stage II sporulation protein E (SpoIIE) CFLA_RS14995 PF13466 STAS domain CFLA_RS14995 PF13581 Histidine kinase-like ATPase domain CFLA_RS14995 PF08448 PAS fold CFLA_RS15005 PF01116 Fructose-bisphosphate aldolase class-II CFLA_RS15015 PF00588 SpoU rRNA Methylase family CFLA_RS15020 PF09335 SNARE associated Golgi protein CFLA_RS15025 PF13344 Haloacid dehalogenase-like hydrolase CFLA_RS15035 PF04011 LemA family CFLA_RS15045 PF00156 Phosphoribosyl transferase domain CFLA_RS15070 PF09382 RQC domain CFLA_RS15070 PF00570 HRDC domain CFLA_RS15070 PF16124 RecQ zinc-binding CFLA_RS15070 PF00270 DEAD/DEAH box helicase CFLA_RS15070 PF00271 Helicase conserved C-terminal domain CFLA_RS15075 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15080 PF13378 Enolase C-terminal domain-like CFLA_RS15080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFLA_RS15085 PF07488 Glycosyl hydrolase family 67 middle domain CFLA_RS15085 PF07477 Glycosyl hydrolase family 67 C-terminus CFLA_RS15085 PF03648 Glycosyl hydrolase family 67 N-terminus CFLA_RS15090 PF00248 Aldo/keto reductase family CFLA_RS15100 PF00183 Hsp90 protein CFLA_RS15130 PF12728 Helix-turn-helix domain CFLA_RS15140 PF02449 Beta-galactosidase CFLA_RS15140 PF08533 Beta-galactosidase C-terminal domain CFLA_RS15140 PF08532 Beta-galactosidase trimerisation domain CFLA_RS15150 PF01229 Glycosyl hydrolases family 39 CFLA_RS15160 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15170 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15180 PF00588 SpoU rRNA Methylase family CFLA_RS15195 PF00392 Bacterial regulatory proteins, gntR family CFLA_RS15195 PF07729 FCD domain CFLA_RS15210 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15215 PF00294 pfkB family carbohydrate kinase CFLA_RS15220 PF01081 KDPG and KHG aldolase CFLA_RS15225 PF02614 Glucuronate isomerase CFLA_RS15230 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15235 PF08125 Mannitol dehydrogenase C-terminal domain CFLA_RS15235 PF01232 Mannitol dehydrogenase Rossmann domain CFLA_RS15245 PF00005 ABC transporter CFLA_RS15250 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15255 PF09084 NMT1/THI5 like CFLA_RS15260 PF01381 Helix-turn-helix CFLA_RS15265 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS15275 PF08533 Beta-galactosidase C-terminal domain CFLA_RS15275 PF08532 Beta-galactosidase trimerisation domain CFLA_RS15275 PF02449 Beta-galactosidase CFLA_RS15280 PF00005 ABC transporter CFLA_RS15285 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS15285 PF03664 Glycosyl hydrolase family 62 CFLA_RS15290 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15300 PF14310 Fibronectin type III-like domain CFLA_RS15300 PF00933 Glycosyl hydrolase family 3 N terminal domain CFLA_RS15300 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFLA_RS15315 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15320 PF02927 Cellulase N-terminal ig-like domain CFLA_RS15320 PF02018 Carbohydrate binding domain CFLA_RS15320 PF07679 Immunoglobulin I-set domain CFLA_RS15320 PF00759 Glycosyl hydrolase family 9 CFLA_RS15325 PF12464 Maltose acetyltransferase CFLA_RS15325 PF00132 Bacterial transferase hexapeptide (six repeats) CFLA_RS15345 PF03176 MMPL family CFLA_RS15355 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS15360 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS15365 PF00005 ABC transporter CFLA_RS15370 PF13407 Periplasmic binding protein domain CFLA_RS15375 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS15380 PF01839 FG-GAP repeat CFLA_RS15380 PF18370 Rhamnogalacturonan I lyases beta-sheet domain CFLA_RS15390 PF00293 NUDIX domain CFLA_RS15400 PF13302 Acetyltransferase (GNAT) domain CFLA_RS15405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CFLA_RS15405 PF04616 Glycosyl hydrolases family 43 CFLA_RS15410 PF14310 Fibronectin type III-like domain CFLA_RS15410 PF00933 Glycosyl hydrolase family 3 N terminal domain CFLA_RS15410 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFLA_RS15415 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15420 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15435 PF07724 AAA domain (Cdc48 subfamily) CFLA_RS15435 PF10431 C-terminal, D2-small domain, of ClpB protein CFLA_RS15435 PF17871 AAA lid domain CFLA_RS15435 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS15435 PF02861 Clp amino terminal domain, pathogenicity island component CFLA_RS15445 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CFLA_RS15445 PF18277 AbrB C-terminal domain CFLA_RS15460 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS15460 PF17866 AAA lid domain CFLA_RS15470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFLA_RS15480 PF16919 Protein kinase G rubredoxin domain CFLA_RS15480 PF16918 Protein kinase G tetratricopeptide repeat CFLA_RS15480 PF00069 Protein kinase domain CFLA_RS15495 PF12773 Double zinc ribbon CFLA_RS15495 PF00498 FHA domain CFLA_RS15515 PF03061 Thioesterase superfamily CFLA_RS15525 PF02146 Sir2 family CFLA_RS15535 PF17863 AAA lid domain CFLA_RS15535 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS15575 PF02580 D-Tyr-tRNA(Tyr) deacylase CFLA_RS15595 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFLA_RS15595 PF01571 Aminomethyltransferase folate-binding domain CFLA_RS15600 PF08768 Domain of unknown function (DUF1794) CFLA_RS15610 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS15615 PF06965 Na+/H+ antiporter 1 CFLA_RS15620 PF00561 alpha/beta hydrolase fold CFLA_RS15625 PF00730 HhH-GPD superfamily base excision DNA repair protein CFLA_RS15625 PF10576 Iron-sulfur binding domain of endonuclease III CFLA_RS15625 PF00633 Helix-hairpin-helix motif CFLA_RS15635 PF13545 Crp-like helix-turn-helix domain CFLA_RS15635 PF00027 Cyclic nucleotide-binding domain CFLA_RS15645 PF02467 Transcription factor WhiB CFLA_RS15650 PF00912 Transglycosylase CFLA_RS15650 PF00905 Penicillin binding protein transpeptidase domain CFLA_RS15670 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS15670 PF00072 Response regulator receiver domain CFLA_RS15680 PF00041 Fibronectin type III domain CFLA_RS15680 PF02011 Glycosyl hydrolase family 48 CFLA_RS15680 PF00553 Cellulose binding domain CFLA_RS15690 PF00005 ABC transporter CFLA_RS15705 PF00005 ABC transporter CFLA_RS15730 PF01565 FAD binding domain CFLA_RS15730 PF08031 Berberine and berberine like CFLA_RS15745 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFLA_RS15745 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFLA_RS15750 PF01842 ACT domain CFLA_RS15750 PF13840 ACT domain CFLA_RS15750 PF00696 Amino acid kinase family CFLA_RS15760 PF00005 ABC transporter CFLA_RS15775 PF00633 Helix-hairpin-helix motif CFLA_RS15775 PF02132 RecR protein CFLA_RS15775 PF13662 Toprim domain CFLA_RS15780 PF12169 DNA polymerase III subunits gamma and tau domain III CFLA_RS15790 PF00005 ABC transporter CFLA_RS15800 PF01979 Amidohydrolase family CFLA_RS15810 PF00149 Calcineurin-like phosphoesterase CFLA_RS15835 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CFLA_RS15865 PF00313 'Cold-shock' DNA-binding domain CFLA_RS15885 PF01553 Acyltransferase CFLA_RS15910 PF00860 Permease family CFLA_RS15930 PF13632 Glycosyl transferase family group 2 CFLA_RS15930 PF00535 Glycosyl transferase family 2 CFLA_RS15945 PF06827 Zinc finger found in FPG and IleRS CFLA_RS15945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFLA_RS15945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFLA_RS15950 PF13350 Tyrosine phosphatase family CFLA_RS15955 PF00005 ABC transporter CFLA_RS15955 PF09383 NIL domain CFLA_RS15960 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS15965 PF03180 NLPA lipoprotein CFLA_RS15990 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS16005 PF13472 GDSL-like Lipase/Acylhydrolase family CFLA_RS16005 PF17996 Carbohydrate esterase 2 N-terminal CFLA_RS16010 PF08244 Glycosyl hydrolases family 32 C terminal CFLA_RS16010 PF00251 Glycosyl hydrolases family 32 N-terminal domain CFLA_RS16030 PF03259 Roadblock/LC7 domain CFLA_RS16040 PF16884 N-terminal domain of oxidoreductase CFLA_RS16040 PF00107 Zinc-binding dehydrogenase CFLA_RS16050 PF10759 Protein of unknown function (DUF2587) CFLA_RS16055 PF00892 EamA-like transporter family CFLA_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS16070 PF01547 Bacterial extracellular solute-binding protein CFLA_RS16080 PF02403 Seryl-tRNA synthetase N-terminal domain CFLA_RS16080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFLA_RS16085 PF00781 Diacylglycerol kinase catalytic domain CFLA_RS16090 PF00800 Prephenate dehydratase CFLA_RS16090 PF01842 ACT domain CFLA_RS16100 PF00535 Glycosyl transferase family 2 CFLA_RS16110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFLA_RS16110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFLA_RS16110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFLA_RS16110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFLA_RS16115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFLA_RS16115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFLA_RS16115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFLA_RS16120 PF02156 Glycosyl hydrolase family 26 CFLA_RS16120 PF00404 Dockerin type I domain CFLA_RS16120 PF03425 Carbohydrate binding domain (family 11) CFLA_RS16120 PF00150 Cellulase (glycosyl hydrolase family 5) CFLA_RS16125 PF00535 Glycosyl transferase family 2 CFLA_RS16135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFLA_RS16135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFLA_RS16135 PF00205 Thiamine pyrophosphate enzyme, central domain CFLA_RS16140 PF05977 Transmembrane secretion effector CFLA_RS16160 PF00005 ABC transporter CFLA_RS16160 PF17755 UvrA DNA-binding domain CFLA_RS16160 PF17760 UvrA interaction domain CFLA_RS16175 PF07228 Stage II sporulation protein E (SpoIIE) CFLA_RS16175 PF00672 HAMP domain CFLA_RS16180 PF13593 SBF-like CPA transporter family (DUF4137) CFLA_RS16190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFLA_RS16190 PF01367 5'-3' exonuclease, C-terminal SAM fold CFLA_RS16215 PF04954 Siderophore-interacting protein CFLA_RS16215 PF08021 Siderophore-interacting FAD-binding domain CFLA_RS16225 PF00296 Luciferase-like monooxygenase CFLA_RS16245 PF05368 NmrA-like family CFLA_RS16260 PF00072 Response regulator receiver domain CFLA_RS16260 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS16265 PF07729 FCD domain CFLA_RS16265 PF00392 Bacterial regulatory proteins, gntR family CFLA_RS16270 PF00296 Luciferase-like monooxygenase CFLA_RS16275 PF00128 Alpha amylase, catalytic domain CFLA_RS16275 PF16657 Maltogenic Amylase, C-terminal domain CFLA_RS16280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFLA_RS16285 PF03144 Elongation factor Tu domain 2 CFLA_RS16285 PF00009 Elongation factor Tu GTP binding domain CFLA_RS16285 PF14492 Elongation Factor G, domain II CFLA_RS16285 PF00679 Elongation factor G C-terminus CFLA_RS16285 PF03764 Elongation factor G, domain IV CFLA_RS16300 PF00005 ABC transporter CFLA_RS16305 PF01300 Telomere recombination CFLA_RS16310 PF03167 Uracil DNA glycosylase superfamily CFLA_RS16325 PF13460 NAD(P)H-binding CFLA_RS16335 PF00571 CBS domain CFLA_RS16355 PF07690 Major Facilitator Superfamily CFLA_RS16420 PF17191 RecG wedge domain CFLA_RS16420 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CFLA_RS16420 PF00270 DEAD/DEAH box helicase CFLA_RS16460 PF17418 Sporulation delaying protein SdpA CFLA_RS16495 PF12728 Helix-turn-helix domain CFLA_RS16530 PF00271 Helicase conserved C-terminal domain CFLA_RS16530 PF00176 SNF2 family N-terminal domain CFLA_RS16535 PF13476 AAA domain CFLA_RS16555 PF13333 Integrase core domain CFLA_RS16555 PF00665 Integrase core domain CFLA_RS16555 PF13276 HTH-like domain CFLA_RS16565 PF01527 Transposase CFLA_RS16570 PF00665 Integrase core domain CFLA_RS16570 PF13276 HTH-like domain CFLA_RS16595 PF00012 Hsp70 protein CFLA_RS16610 PF09369 Domain of unknown function (DUF1998) CFLA_RS16610 PF00271 Helicase conserved C-terminal domain CFLA_RS16610 PF00270 DEAD/DEAH box helicase CFLA_RS16615 PF18337 RapA N-terminal Tudor like domain CFLA_RS16615 PF12137 RNA polymerase recycling family C-terminal CFLA_RS16615 PF18339 RapA N-terminal Tudor like domain 1 CFLA_RS16615 PF00176 SNF2 family N-terminal domain CFLA_RS16615 PF00271 Helicase conserved C-terminal domain CFLA_RS16620 PF02384 N-6 DNA Methylase CFLA_RS16620 PF12161 HsdM N-terminal domain CFLA_RS16625 PF07728 AAA domain (dynein-related subfamily) CFLA_RS16625 PF12102 Domain of unknown function (DUF3578) CFLA_RS16705 PF12419 SNF2 Helicase protein CFLA_RS16705 PF00271 Helicase conserved C-terminal domain CFLA_RS16705 PF00176 SNF2 family N-terminal domain CFLA_RS16760 PF13520 Amino acid permease CFLA_RS16765 PF00324 Amino acid permease CFLA_RS16775 PF04072 Leucine carboxyl methyltransferase CFLA_RS16780 PF01494 FAD binding domain CFLA_RS16785 PF04486 SchA/CurD like domain CFLA_RS16805 PF03364 Polyketide cyclase / dehydrase and lipid transport CFLA_RS16810 PF02801 Beta-ketoacyl synthase, C-terminal domain CFLA_RS16810 PF00109 Beta-ketoacyl synthase, N-terminal domain CFLA_RS16815 PF00109 Beta-ketoacyl synthase, N-terminal domain CFLA_RS16815 PF02801 Beta-ketoacyl synthase, C-terminal domain CFLA_RS16820 PF07730 Histidine kinase CFLA_RS16825 PF00072 Response regulator receiver domain CFLA_RS16825 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS16835 PF03176 MMPL family CFLA_RS16840 PF00072 Response regulator receiver domain CFLA_RS16840 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS16845 PF00672 HAMP domain CFLA_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS16845 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS16850 PF00080 Copper/zinc superoxide dismutase (SODC) CFLA_RS16865 PF01022 Bacterial regulatory protein, arsR family CFLA_RS16880 PF01230 HIT domain CFLA_RS16885 PF07971 Glycosyl hydrolase family 92 CFLA_RS16885 PF17678 Glycosyl hydrolase family 92 N-terminal domain CFLA_RS16930 PF01522 Polysaccharide deacetylase CFLA_RS16935 PF00128 Alpha amylase, catalytic domain CFLA_RS16940 PF07859 alpha/beta hydrolase fold CFLA_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS16950 PF00528 Binding-protein-dependent transport system inner membrane component CFLA_RS16960 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS16975 PF07690 Major Facilitator Superfamily CFLA_RS16985 PF01554 MatE CFLA_RS17005 PF01022 Bacterial regulatory protein, arsR family CFLA_RS17010 PF13847 Methyltransferase domain CFLA_RS17030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFLA_RS17030 PF00364 Biotin-requiring enzyme CFLA_RS17030 PF02817 e3 binding domain CFLA_RS17035 PF02780 Transketolase, C-terminal domain CFLA_RS17035 PF02779 Transketolase, pyrimidine binding domain CFLA_RS17040 PF00676 Dehydrogenase E1 component CFLA_RS17045 PF05368 NmrA-like family CFLA_RS17050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFLA_RS17080 PF01580 FtsK/SpoIIIE family CFLA_RS17080 PF12538 DNA transporter CFLA_RS17100 PF00931 NB-ARC domain CFLA_RS17100 PF03704 Bacterial transcriptional activator domain CFLA_RS17100 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS17105 PF00155 Aminotransferase class I and II CFLA_RS17110 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CFLA_RS17120 PF02780 Transketolase, C-terminal domain CFLA_RS17120 PF02779 Transketolase, pyrimidine binding domain CFLA_RS17125 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS17130 PF08244 Glycosyl hydrolases family 32 C terminal CFLA_RS17130 PF00251 Glycosyl hydrolases family 32 N-terminal domain CFLA_RS17135 PF00005 ABC transporter CFLA_RS17140 PF02653 Branched-chain amino acid transport system / permease component CFLA_RS17145 PF13407 Periplasmic binding protein domain CFLA_RS17150 PF02435 Levansucrase/Invertase CFLA_RS17160 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CFLA_RS17190 PF07726 ATPase family associated with various cellular activities (AAA) CFLA_RS17190 PF17863 AAA lid domain CFLA_RS17205 PF05175 Methyltransferase small domain CFLA_RS17230 PF13936 Helix-turn-helix domain CFLA_RS17230 PF00665 Integrase core domain CFLA_RS17270 PF08328 Adenylosuccinate lyase C-terminal CFLA_RS17270 PF00206 Lyase CFLA_RS17280 PF03190 Protein of unknown function, DUF255 CFLA_RS17290 PF03364 Polyketide cyclase / dehydrase and lipid transport CFLA_RS17295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CFLA_RS17295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CFLA_RS17295 PF01488 Shikimate / quinate 5-dehydrogenase CFLA_RS17300 PF01208 Uroporphyrinogen decarboxylase (URO-D) CFLA_RS17305 PF01593 Flavin containing amine oxidoreductase CFLA_RS17310 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CFLA_RS17310 PF03900 Porphobilinogen deaminase, C-terminal domain CFLA_RS17320 PF00490 Delta-aminolevulinic acid dehydratase CFLA_RS17325 PF00202 Aminotransferase class-III CFLA_RS17330 PF01925 Sulfite exporter TauE/SafE CFLA_RS17335 PF02082 Transcriptional regulator CFLA_RS17340 PF02583 Metal-sensitive transcriptional repressor CFLA_RS17350 PF00403 Heavy-metal-associated domain CFLA_RS17370 PF00005 ABC transporter CFLA_RS17400 PF05532 CsbD-like CFLA_RS17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS17410 PF08446 PAS fold CFLA_RS17410 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS17410 PF01590 GAF domain CFLA_RS17410 PF00360 Phytochrome region CFLA_RS17430 PF00296 Luciferase-like monooxygenase CFLA_RS17440 PF01487 Type I 3-dehydroquinase CFLA_RS17445 PF03551 Transcriptional regulator PadR-like family CFLA_RS17450 PF01594 AI-2E family transporter CFLA_RS17470 PF00892 EamA-like transporter family CFLA_RS17475 PF01022 Bacterial regulatory protein, arsR family CFLA_RS17490 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CFLA_RS17495 PF00365 Phosphofructokinase CFLA_RS17500 PF16657 Maltogenic Amylase, C-terminal domain CFLA_RS17500 PF02903 Alpha amylase, N-terminal ig-like domain CFLA_RS17500 PF00128 Alpha amylase, catalytic domain CFLA_RS17510 PF13443 Cro/C1-type HTH DNA-binding domain CFLA_RS17520 PF08659 KR domain CFLA_RS17520 PF00698 Acyl transferase domain CFLA_RS17520 PF02801 Beta-ketoacyl synthase, C-terminal domain CFLA_RS17520 PF08990 Erythronolide synthase docking CFLA_RS17520 PF00109 Beta-ketoacyl synthase, N-terminal domain CFLA_RS17520 PF16197 Ketoacyl-synthetase C-terminal extension CFLA_RS17520 PF14765 Polyketide synthase dehydratase CFLA_RS17520 PF00550 Phosphopantetheine attachment site CFLA_RS17520 PF09277 Erythronolide synthase, docking CFLA_RS17520 PF08240 Alcohol dehydrogenase GroES-like domain CFLA_RS17525 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS17530 PF00005 ABC transporter CFLA_RS17535 PF02687 FtsX-like permease family CFLA_RS17540 PF01810 LysE type translocator CFLA_RS17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFLA_RS17545 PF03466 LysR substrate binding domain CFLA_RS17595 PF03009 Glycerophosphoryl diester phosphodiesterase family CFLA_RS17610 PF00067 Cytochrome P450 CFLA_RS17625 PF02675 S-adenosylmethionine decarboxylase CFLA_RS17650 PF03358 NADPH-dependent FMN reductase CFLA_RS17725 PF04545 Sigma-70, region 4 CFLA_RS17725 PF04542 Sigma-70 region 2 CFLA_RS17750 PF00042 Globin CFLA_RS17750 PF00175 Oxidoreductase NAD-binding domain CFLA_RS17750 PF00970 Oxidoreductase FAD-binding domain CFLA_RS17755 PF00561 alpha/beta hydrolase fold CFLA_RS17760 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CFLA_RS17765 PF00356 Bacterial regulatory proteins, lacI family CFLA_RS17775 PF00331 Glycosyl hydrolase family 10 CFLA_RS17775 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS17795 PF00672 HAMP domain CFLA_RS17795 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS17800 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS17800 PF00072 Response regulator receiver domain CFLA_RS17845 PF05199 GMC oxidoreductase CFLA_RS17850 PF00331 Glycosyl hydrolase family 10 CFLA_RS17850 PF00756 Putative esterase CFLA_RS17850 PF00404 Dockerin type I domain CFLA_RS17850 PF03422 Carbohydrate binding module (family 6) CFLA_RS17855 PF17933 Tetracyclin repressor-like, C-terminal domain CFLA_RS17855 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS17860 PF13732 Domain of unknown function (DUF4162) CFLA_RS17860 PF00005 ABC transporter CFLA_RS17870 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS17870 PF00072 Response regulator receiver domain CFLA_RS17875 PF02702 Osmosensitive K+ channel His kinase sensor domain CFLA_RS17875 PF13493 Domain of unknown function (DUF4118) CFLA_RS17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS17875 PF00512 His Kinase A (phospho-acceptor) domain CFLA_RS17875 PF00582 Universal stress protein family CFLA_RS17900 PF01494 FAD binding domain CFLA_RS17910 PF00849 RNA pseudouridylate synthase CFLA_RS17930 PF02018 Carbohydrate binding domain CFLA_RS17930 PF02927 Cellulase N-terminal ig-like domain CFLA_RS17930 PF00759 Glycosyl hydrolase family 9 CFLA_RS17975 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS17980 PF00106 short chain dehydrogenase CFLA_RS18045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFLA_RS18045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFLA_RS18045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFLA_RS18045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFLA_RS18050 PF12848 ABC transporter CFLA_RS18050 PF16326 ABC transporter C-terminal domain CFLA_RS18050 PF00005 ABC transporter CFLA_RS18065 PF00485 Phosphoribulokinase / Uridine kinase family CFLA_RS18070 PF00005 ABC transporter CFLA_RS18075 PF00005 ABC transporter CFLA_RS18075 PF00664 ABC transporter transmembrane region CFLA_RS18080 PF02709 N-terminal domain of galactosyltransferase CFLA_RS18080 PF00535 Glycosyl transferase family 2 CFLA_RS18085 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS18095 PF00483 Nucleotidyl transferase CFLA_RS18105 PF00483 Nucleotidyl transferase CFLA_RS18115 PF16363 GDP-mannose 4,6 dehydratase CFLA_RS18135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFLA_RS18140 PF01063 Amino-transferase class IV CFLA_RS18145 PF05050 Methyltransferase FkbM domain CFLA_RS18230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CFLA_RS18240 PF01588 Putative tRNA binding domain CFLA_RS18240 PF09334 tRNA synthetases class I (M) CFLA_RS18250 PF00206 Lyase CFLA_RS18250 PF02655 ATP-grasp domain CFLA_RS18260 PF01565 FAD binding domain CFLA_RS18260 PF08031 Berberine and berberine like CFLA_RS18265 PF01613 Flavin reductase like domain CFLA_RS18275 PF01965 DJ-1/PfpI family CFLA_RS18280 PF07690 Major Facilitator Superfamily CFLA_RS18300 PF05731 TROVE domain CFLA_RS18315 PF13419 Haloacid dehalogenase-like hydrolase CFLA_RS18325 PF00459 Inositol monophosphatase family CFLA_RS18330 PF00248 Aldo/keto reductase family CFLA_RS18335 PF13333 Integrase core domain CFLA_RS18335 PF13276 HTH-like domain CFLA_RS18335 PF00665 Integrase core domain CFLA_RS18355 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS18360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS18365 PF00085 Thioredoxin CFLA_RS18370 PF01758 Sodium Bile acid symporter family CFLA_RS18375 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS18380 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFLA_RS18395 PF01022 Bacterial regulatory protein, arsR family CFLA_RS18400 PF01022 Bacterial regulatory protein, arsR family CFLA_RS18415 PF00872 Transposase, Mutator family CFLA_RS18420 PF13411 MerR HTH family regulatory protein CFLA_RS18425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS18425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFLA_RS18430 PF00872 Transposase, Mutator family CFLA_RS18435 PF00403 Heavy-metal-associated domain CFLA_RS18450 PF00403 Heavy-metal-associated domain CFLA_RS18455 PF02583 Metal-sensitive transcriptional repressor CFLA_RS18465 PF00578 AhpC/TSA family CFLA_RS18480 PF00072 Response regulator receiver domain CFLA_RS18480 PF00486 Transcriptional regulatory protein, C terminal CFLA_RS18485 PF01790 Prolipoprotein diacylglyceryl transferase CFLA_RS18495 PF01012 Electron transfer flavoprotein domain CFLA_RS18500 PF01012 Electron transfer flavoprotein domain CFLA_RS18500 PF00766 Electron transfer flavoprotein FAD-binding domain CFLA_RS18510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS18540 PF03796 DnaB-like helicase C terminal domain CFLA_RS18540 PF03796 DnaB-like helicase C terminal domain CFLA_RS18545 PF01554 MatE CFLA_RS18585 PF01281 Ribosomal protein L9, N-terminal domain CFLA_RS18585 PF03948 Ribosomal protein L9, C-terminal domain CFLA_RS18590 PF01084 Ribosomal protein S18 CFLA_RS18595 PF00436 Single-strand binding protein family CFLA_RS18600 PF01250 Ribosomal protein S6 CFLA_RS18605 PF00912 Transglycosylase CFLA_RS18605 PF00905 Penicillin binding protein transpeptidase domain CFLA_RS18615 PF01658 Myo-inositol-1-phosphate synthase CFLA_RS18640 PF07690 Major Facilitator Superfamily CFLA_RS18645 PF13426 PAS domain CFLA_RS18645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFLA_RS18645 PF00072 Response regulator receiver domain CFLA_RS18660 PF13735 tRNA nucleotidyltransferase domain 2 putative CFLA_RS18660 PF01743 Poly A polymerase head domain CFLA_RS18660 PF12627 Probable RNA and SrmB- binding site of polymerase A CFLA_RS18665 PF00293 NUDIX domain CFLA_RS18675 PF03023 Lipid II flippase MurJ CFLA_RS18685 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFLA_RS18690 PF00085 Thioredoxin CFLA_RS18695 PF17762 HTH domain found in ParB protein CFLA_RS18695 PF02195 ParB-like nuclease domain CFLA_RS18700 PF13614 AAA domain CFLA_RS18710 PF02527 rRNA small subunit methyltransferase G CFLA_RS18720 PF02096 60Kd inner membrane protein CFLA_RS18725 PF01809 Putative membrane protein insertion efficiency factor CFLA_RS18730 PF00825 Ribonuclease P CFLA_RS18735 PF00468 Ribosomal protein L34 CFLA_RS18760 PF00069 Protein kinase domain CFLA_RS18775 PF00817 impB/mucB/samB family CFLA_RS18775 PF11799 impB/mucB/samB family C-terminal domain CFLA_RS18795 PF04616 Glycosyl hydrolases family 43 CFLA_RS18835 PF02557 D-alanyl-D-alanine carboxypeptidase CFLA_RS18840 PF00331 Glycosyl hydrolase family 10 CFLA_RS18840 PF02018 Carbohydrate binding domain CFLA_RS18840 PF06452 Carbohydrate family 9 binding domain-like CFLA_RS18850 PF01774 UreD urease accessory protein CFLA_RS18860 PF01730 UreF CFLA_RS18870 PF00534 Glycosyl transferases group 1 CFLA_RS18870 PF13439 Glycosyltransferase Family 4 CFLA_RS18885 PF00188 Cysteine-rich secretory protein family CFLA_RS18915 PF02011 Glycosyl hydrolase family 48 CFLA_RS18915 PF00041 Fibronectin type III domain CFLA_RS18915 PF00553 Cellulose binding domain CFLA_RS18930 PF00082 Subtilase family CFLA_RS18960 PF00436 Single-strand binding protein family CFLA_RS18965 PF00990 Diguanylate cyclase, GGDEF domain CFLA_RS18965 PF08448 PAS fold CFLA_RS18965 PF08447 PAS fold CFLA_RS18965 PF00563 EAL domain CFLA_RS18970 PF00331 Glycosyl hydrolase family 10 CFLA_RS18970 PF00553 Cellulose binding domain CFLA_RS18985 PF01476 LysM domain CFLA_RS18995 PF00117 Glutamine amidotransferase class-I CFLA_RS19010 PF00583 Acetyltransferase (GNAT) family CFLA_RS19025 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS19025 PF00331 Glycosyl hydrolase family 10 CFLA_RS19040 PF07470 Glycosyl Hydrolase Family 88 CFLA_RS19045 PF00877 NlpC/P60 family CFLA_RS19060 PF02734 DAK2 domain CFLA_RS19060 PF13684 Dihydroxyacetone kinase family CFLA_RS19075 PF00534 Glycosyl transferases group 1 CFLA_RS19075 PF13439 Glycosyltransferase Family 4 CFLA_RS19090 PF08310 LGFP repeat CFLA_RS19090 PF00756 Putative esterase CFLA_RS19105 PF00691 OmpA family CFLA_RS19105 PF05736 OprF membrane domain CFLA_RS19110 PF17200 Single Cache domain 2 CFLA_RS19110 PF07730 Histidine kinase CFLA_RS19195 PF00440 Bacterial regulatory proteins, tetR family CFLA_RS19210 PF00150 Cellulase (glycosyl hydrolase family 5) CFLA_RS19210 PF00404 Dockerin type I domain CFLA_RS19210 PF02156 Glycosyl hydrolase family 26 CFLA_RS19210 PF03425 Carbohydrate binding domain (family 11) CFLA_RS19245 PF00196 Bacterial regulatory proteins, luxR family CFLA_RS19245 PF00072 Response regulator receiver domain CFLA_RS19260 PF01209 ubiE/COQ5 methyltransferase family CFLA_RS19270 PF02861 Clp amino terminal domain, pathogenicity island component CFLA_RS19270 PF17871 AAA lid domain CFLA_RS19270 PF07724 AAA domain (Cdc48 subfamily) CFLA_RS19270 PF00004 ATPase family associated with various cellular activities (AAA) CFLA_RS19270 PF10431 C-terminal, D2-small domain, of ClpB protein CFLA_RS19275 PF00331 Glycosyl hydrolase family 10 CFLA_RS19275 PF00652 Ricin-type beta-trefoil lectin domain CFLA_RS19280 PF00264 Common central domain of tyrosinase CFLA_RS19285 PF08241 Methyltransferase domain CFLA_RS19300 PF00293 NUDIX domain