locus-tag class description JS522_RS00005 PF00490 Delta-aminolevulinic acid dehydratase JS522_RS00010 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JS522_RS00010 PF11973 NQRA C-terminal domain JS522_RS00020 PF01272 Transcription elongation factor, GreA/GreB, C-term JS522_RS00020 PF03449 Transcription elongation factor, N-terminal JS522_RS00030 PF00155 Aminotransferase class I and II JS522_RS00040 PF00580 UvrD/REP helicase N-terminal domain JS522_RS00040 PF13361 UvrD-like helicase C-terminal domain JS522_RS00050 PF07690 Major Facilitator Superfamily JS522_RS00055 PF17773 UPF0176 acylphosphatase like domain JS522_RS00055 PF12368 Rhodanase C-terminal JS522_RS00055 PF00581 Rhodanese-like domain JS522_RS00060 PF01479 S4 domain JS522_RS00060 PF00163 Ribosomal protein S4/S9 N-terminal domain JS522_RS00065 PF01261 Xylose isomerase-like TIM barrel JS522_RS00070 PF03023 Lipid II flippase MurJ JS522_RS00100 PF00005 ABC transporter JS522_RS00110 PF00793 DAHP synthetase I family JS522_RS00125 PF00849 RNA pseudouridylate synthase JS522_RS00125 PF01479 S4 domain JS522_RS00140 PF00521 DNA gyrase/topoisomerase IV, subunit A JS522_RS00145 PF00204 DNA gyrase B JS522_RS00145 PF00986 DNA gyrase B subunit, carboxyl terminus JS522_RS00145 PF01751 Toprim domain JS522_RS00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS522_RS00150 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JS522_RS00155 PF05932 Tir chaperone protein (CesT) family JS522_RS00165 PF17376 Family of unknown function (DUF5398) JS522_RS00170 PF17401 Family of unknown function (DUF5407) JS522_RS00185 PF18269 T3SS EscN ATPase C-terminal domain JS522_RS00185 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS522_RS00185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS522_RS00195 PF17458 Family of unknown function (DUF5421) JS522_RS00205 PF03793 PASTA domain JS522_RS00205 PF00069 Protein kinase domain JS522_RS00210 PF00263 Bacterial type II and III secretion system protein JS522_RS00210 PF03958 Bacterial type II/III secretion system short domain JS522_RS00220 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JS522_RS00225 PF02151 UvrB/uvrC motif JS522_RS00240 PF01765 Ribosome recycling factor JS522_RS00245 PF00696 Amino acid kinase family JS522_RS00250 PF00889 Elongation factor TS JS522_RS00255 PF00318 Ribosomal protein S2 JS522_RS00265 PF01308 Chlamydia major outer membrane protein JS522_RS00270 PF00905 Penicillin binding protein transpeptidase domain JS522_RS00280 PF01458 Uncharacterized protein family (UPF0051) JS522_RS00285 PF00005 ABC transporter JS522_RS00290 PF01458 Uncharacterized protein family (UPF0051) JS522_RS00295 PF00266 Aminotransferase class-V JS522_RS00315 PF02195 ParB-like nuclease domain JS522_RS00315 PF17762 HTH domain found in ParB protein JS522_RS00320 PF00005 ABC transporter JS522_RS00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS522_RS00325 PF00005 ABC transporter JS522_RS00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS522_RS00330 PF01865 Protein of unknown function DUF47 JS522_RS00335 PF01384 Phosphate transporter family JS522_RS00340 PF00162 Phosphoglycerate kinase JS522_RS00370 PF07943 Penicillin-binding protein 5, C-terminal domain JS522_RS00370 PF00768 D-alanyl-D-alanine carboxypeptidase JS522_RS00400 PF07733 Bacterial DNA polymerase III alpha NTPase domain JS522_RS00400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JS522_RS00400 PF14579 Helix-hairpin-helix motif JS522_RS00400 PF02811 PHP domain JS522_RS00405 PF07690 Major Facilitator Superfamily JS522_RS00415 PF03129 Anticodon binding domain JS522_RS00415 PF13393 Histidyl-tRNA synthetase JS522_RS00420 PF00152 tRNA synthetases class II (D, K and N) JS522_RS00420 PF01336 OB-fold nucleic acid binding domain JS522_RS00420 PF02938 GAD domain JS522_RS00425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JS522_RS00425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JS522_RS00430 PF00588 SpoU rRNA Methylase family JS522_RS00435 PF00085 Thioredoxin JS522_RS00445 PF10915 Protein of unknown function (DUF2709) JS522_RS00455 PF00929 Exonuclease JS522_RS00460 PF03061 Thioesterase superfamily JS522_RS00465 PF00795 Carbon-nitrogen hydrolase JS522_RS00470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JS522_RS00475 PF07977 FabA-like domain JS522_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) JS522_RS00480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JS522_RS00485 PF00551 Formyl transferase JS522_RS00485 PF02911 Formyl transferase, C-terminal domain JS522_RS00495 PF00297 Ribosomal protein L3 JS522_RS00500 PF00573 Ribosomal protein L4/L1 family JS522_RS00505 PF00276 Ribosomal protein L23 JS522_RS00510 PF03947 Ribosomal Proteins L2, C-terminal domain JS522_RS00510 PF00181 Ribosomal Proteins L2, RNA binding domain JS522_RS00515 PF00203 Ribosomal protein S19 JS522_RS00520 PF00237 Ribosomal protein L22p/L17e JS522_RS00525 PF07650 KH domain JS522_RS00525 PF00189 Ribosomal protein S3, C-terminal domain JS522_RS00530 PF00252 Ribosomal protein L16p/L10e JS522_RS00535 PF00831 Ribosomal L29 protein JS522_RS00540 PF00366 Ribosomal protein S17 JS522_RS00545 PF00238 Ribosomal protein L14p/L23e JS522_RS00550 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JS522_RS00550 PF00467 KOW motif JS522_RS00555 PF00281 Ribosomal protein L5 JS522_RS00555 PF00673 ribosomal L5P family C-terminus JS522_RS00560 PF00410 Ribosomal protein S8 JS522_RS00565 PF00347 Ribosomal protein L6 JS522_RS00570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JS522_RS00575 PF00333 Ribosomal protein S5, N-terminal domain JS522_RS00575 PF03719 Ribosomal protein S5, C-terminal domain JS522_RS00580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JS522_RS00585 PF00344 SecY translocase JS522_RS00590 PF00416 Ribosomal protein S13/S18 JS522_RS00595 PF00411 Ribosomal protein S11 JS522_RS00600 PF01000 RNA polymerase Rpb3/RpoA insert domain JS522_RS00600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JS522_RS00600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JS522_RS00605 PF01196 Ribosomal protein L17 JS522_RS00610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JS522_RS00610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JS522_RS00630 PF02075 Crossover junction endodeoxyribonuclease RuvC JS522_RS00635 PF01330 RuvA N terminal domain JS522_RS00640 PF00334 Nucleoside diphosphate kinase JS522_RS00650 PF01134 Glucose inhibited division protein A JS522_RS00650 PF13932 GidA associated domain JS522_RS00660 PF03796 DnaB-like helicase C terminal domain JS522_RS00660 PF00772 DnaB-like helicase N terminal domain JS522_RS00670 PF01066 CDP-alcohol phosphatidyltransferase JS522_RS00675 PF03219 TLC ATP/ADP transporter JS522_RS00680 PF08496 Peptidase family S49 N-terminal JS522_RS00680 PF01343 Peptidase family S49 JS522_RS00685 PF01367 5'-3' exonuclease, C-terminal SAM fold JS522_RS00685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JS522_RS00685 PF00476 DNA polymerase family A JS522_RS00690 PF01121 Dephospho-CoA kinase JS522_RS00695 PF07497 Rho termination factor, RNA-binding domain JS522_RS00695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS522_RS00695 PF07498 Rho termination factor, N-terminal domain JS522_RS00705 PF00156 Phosphoribosyl transferase domain JS522_RS00710 PF00483 Nucleotidyl transferase JS522_RS00730 PF00762 Ferrochelatase JS522_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS00770 PF12911 N-terminal TM domain of oligopeptide transport permease C JS522_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS00785 PF03147 Ferredoxin-fold anticodon binding domain JS522_RS00785 PF03484 tRNA synthetase B5 domain JS522_RS00785 PF01588 Putative tRNA binding domain JS522_RS00785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JS522_RS00785 PF03483 B3/4 domain JS522_RS00790 PF01476 LysM domain JS522_RS00795 PF01809 Putative membrane protein insertion efficiency factor JS522_RS00815 PF02565 Recombination protein O C terminal JS522_RS00835 PF00158 Sigma-54 interaction domain JS522_RS00835 PF00072 Response regulator receiver domain JS522_RS00835 PF02954 Bacterial regulatory protein, Fis family JS522_RS00845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS522_RS00845 PF00512 His Kinase A (phospho-acceptor) domain JS522_RS00865 PF13419 Haloacid dehalogenase-like hydrolase JS522_RS00870 PF01416 tRNA pseudouridine synthase JS522_RS00875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JS522_RS00880 PF00149 Calcineurin-like phosphoesterase JS522_RS00905 PF01709 Transcriptional regulator JS522_RS00915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JS522_RS00920 PF05746 DALR anticodon binding domain JS522_RS00920 PF00750 tRNA synthetases class I (R) JS522_RS00920 PF03485 Arginyl tRNA synthetase N terminal domain JS522_RS00930 PF02224 Cytidylate kinase JS522_RS00940 PF01255 Putative undecaprenyl diphosphate synthase JS522_RS00950 PF07549 SecD/SecF GG Motif JS522_RS00950 PF02355 Protein export membrane protein JS522_RS00955 PF01368 DHH family JS522_RS00955 PF02272 DHHA1 domain JS522_RS00955 PF17768 RecJ OB domain JS522_RS00965 PF12728 Helix-turn-helix domain JS522_RS00970 PF00749 tRNA synthetases class I (E and Q), catalytic domain JS522_RS00980 PF03503 Chlamydia cysteine-rich outer membrane protein 3 JS522_RS00985 PF03504 Chlamydia cysteine-rich outer membrane protein 6 JS522_RS00985 PF01345 Domain of unknown function DUF11 JS522_RS00990 PF05745 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) JS522_RS00995 PF17804 Tail specific protease N-terminal domain JS522_RS00995 PF00595 PDZ domain JS522_RS00995 PF03572 Peptidase family S41 JS522_RS00995 PF11818 C-terminal domain of tail specific protease (DUF3340) JS522_RS01010 PF00164 Ribosomal protein S12/S23 JS522_RS01015 PF00177 Ribosomal protein S7p/S5e JS522_RS01020 PF00679 Elongation factor G C-terminus JS522_RS01020 PF00009 Elongation factor Tu GTP binding domain JS522_RS01020 PF03764 Elongation factor G, domain IV JS522_RS01020 PF03144 Elongation factor Tu domain 2 JS522_RS01020 PF14492 Elongation Factor G, domain II JS522_RS01025 PF00338 Ribosomal protein S10p/S20e JS522_RS01030 PF00175 Oxidoreductase NAD-binding domain JS522_RS01030 PF00258 Flavodoxin JS522_RS01030 PF00667 FAD binding domain JS522_RS01035 PF02542 YgbB family JS522_RS01050 PF00829 Ribosomal prokaryotic L21 protein JS522_RS01055 PF01016 Ribosomal L27 protein JS522_RS01060 PF01926 50S ribosome-binding GTPase JS522_RS01060 PF01018 GTP1/OBG JS522_RS01065 PF00950 ABC 3 transport family JS522_RS01070 PF00005 ABC transporter JS522_RS01075 PF01297 Zinc-uptake complex component A periplasmic JS522_RS01085 PF02581 Thiamine monophosphate synthase JS522_RS01090 PF02110 Hydroxyethylthiazole kinase family JS522_RS01095 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01095 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01095 PF03797 Autotransporter beta-domain JS522_RS01100 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01100 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01115 PF01235 Sodium:alanine symporter family JS522_RS01120 PF01252 Signal peptidase (SPase) II JS522_RS01125 PF01258 Prokaryotic dksA/traR C4-type zinc finger JS522_RS01130 PF03477 ATP cone domain JS522_RS01135 PF00677 Lumazine binding domain JS522_RS01140 PF10672 S-adenosylmethionine-dependent methyltransferase JS522_RS01145 PF00588 SpoU rRNA Methylase family JS522_RS01150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JS522_RS01155 PF00375 Sodium:dicarboxylate symporter family JS522_RS01160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS522_RS01160 PF00364 Biotin-requiring enzyme JS522_RS01160 PF02817 e3 binding domain JS522_RS01165 PF01380 SIS domain JS522_RS01165 PF00571 CBS domain JS522_RS01195 PF00464 Serine hydroxymethyltransferase JS522_RS01200 PF00574 Clp protease JS522_RS01205 PF01678 Diaminopimelate epimerase JS522_RS01210 PF03682 Uncharacterised protein family (UPF0158) JS522_RS01215 PF01209 ubiE/COQ5 methyltransferase family JS522_RS01225 PF04055 Radical SAM superfamily JS522_RS01235 PF12228 Protein of unknown function (DUF3604) JS522_RS01240 PF01740 STAS domain JS522_RS01245 PF00571 CBS domain JS522_RS01245 PF03471 Transporter associated domain JS522_RS01250 PF02130 Uncharacterized protein family UPF0054 JS522_RS01270 PF02245 Methylpurine-DNA glycosylase (MPG) JS522_RS01275 PF08206 Ribonuclease B OB domain JS522_RS01275 PF00773 RNB domain JS522_RS01280 PF00012 Hsp70 protein JS522_RS01285 PF01025 GrpE JS522_RS01290 PF01628 HrcA protein C terminal domain JS522_RS01295 PF03129 Anticodon binding domain JS522_RS01295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS522_RS01295 PF04073 Aminoacyl-tRNA editing domain JS522_RS01310 PF02594 Uncharacterised ACR, YggU family COG1872 JS522_RS01320 PF00155 Aminotransferase class I and II JS522_RS01340 PF03690 Uncharacterised protein family (UPF0160) JS522_RS01345 PF01230 HIT domain JS522_RS01370 PF18152 DAHP synthase ferredoxin-like domain JS522_RS01370 PF00793 DAHP synthetase I family JS522_RS01380 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS522_RS01390 PF03099 Biotin/lipoate A/B protein ligase family JS522_RS01390 PF12706 Beta-lactamase superfamily domain JS522_RS01395 PF01926 50S ribosome-binding GTPase JS522_RS01395 PF13167 GTP-binding GTPase N-terminal JS522_RS01395 PF16360 GTP-binding GTPase Middle Region JS522_RS01400 PF04055 Radical SAM superfamily JS522_RS01400 PF00919 Uncharacterized protein family UPF0004 JS522_RS01410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JS522_RS01410 PF02806 Alpha amylase, C-terminal all-beta domain JS522_RS01410 PF00128 Alpha amylase, catalytic domain JS522_RS01425 PF03797 Autotransporter beta-domain JS522_RS01425 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01425 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01430 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01430 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01440 PF03797 Autotransporter beta-domain JS522_RS01440 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01440 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01445 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01445 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01465 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01465 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01470 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01485 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS01485 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JS522_RS01500 PF02686 Glu-tRNAGln amidotransferase C subunit JS522_RS01505 PF01425 Amidase JS522_RS01510 PF02934 GatB/GatE catalytic domain JS522_RS01510 PF02637 GatB domain JS522_RS01515 PF17461 Family of unknown function (DUF5423) JS522_RS01530 PF11858 Domain of unknown function (DUF3378) JS522_RS01530 PF01351 Ribonuclease HII JS522_RS01560 PF11019 Protein of unknown function (DUF2608) JS522_RS01570 PF03190 Protein of unknown function, DUF255 JS522_RS01580 PF00398 Ribosomal RNA adenine dimethylase JS522_RS01590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JS522_RS01590 PF02780 Transketolase, C-terminal domain JS522_RS01590 PF02779 Transketolase, pyrimidine binding domain JS522_RS01600 PF02609 Exonuclease VII small subunit JS522_RS01605 PF13742 OB-fold nucleic acid binding domain JS522_RS01605 PF02601 Exonuclease VII, large subunit JS522_RS01610 PF00121 Triosephosphate isomerase JS522_RS01620 PF01327 Polypeptide deformylase JS522_RS01635 PF02545 Maf-like protein JS522_RS01640 PF00005 ABC transporter JS522_RS01640 PF12848 ABC transporter JS522_RS01645 PF00589 Phage integrase family JS522_RS01645 PF13495 Phage integrase, N-terminal SAM-like domain JS522_RS01650 PF12706 Beta-lactamase superfamily domain JS522_RS01650 PF00753 Metallo-beta-lactamase superfamily JS522_RS01660 PF00004 ATPase family associated with various cellular activities (AAA) JS522_RS01660 PF02190 ATP-dependent protease La (LON) substrate-binding domain JS522_RS01660 PF05362 Lon protease (S16) C-terminal proteolytic domain JS522_RS01665 PF00814 Glycoprotease family JS522_RS01670 PF01165 Ribosomal protein S21 JS522_RS01675 PF00226 DnaJ domain JS522_RS01675 PF01556 DnaJ C terminal domain JS522_RS01675 PF00684 DnaJ central domain JS522_RS01680 PF02780 Transketolase, C-terminal domain JS522_RS01680 PF02779 Transketolase, pyrimidine binding domain JS522_RS01700 PF00381 PTS HPr component phosphorylation site JS522_RS01705 PF02896 PEP-utilising enzyme, TIM barrel domain JS522_RS01705 PF05524 PEP-utilising enzyme, N-terminal JS522_RS01705 PF00391 PEP-utilising enzyme, mobile domain JS522_RS01710 PF02575 YbaB/EbfC DNA-binding family JS522_RS01715 PF12169 DNA polymerase III subunits gamma and tau domain III JS522_RS01720 PF07697 7TM-HD extracellular JS522_RS01720 PF01966 HD domain JS522_RS01720 PF07698 7TM receptor with intracellular HD hydrolase JS522_RS01740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JS522_RS01745 PF18073 Rubredoxin metal binding domain JS522_RS01750 PF14622 Ribonuclease-III-like JS522_RS01750 PF00035 Double-stranded RNA binding motif JS522_RS01760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JS522_RS01760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JS522_RS01760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JS522_RS01760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JS522_RS01765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JS522_RS01765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JS522_RS01770 PF17848 Acetyl-coA carboxylase zinc finger domain JS522_RS01770 PF01039 Carboxyl transferase domain JS522_RS01775 PF00692 dUTPase JS522_RS01780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS522_RS01785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS522_RS01815 PF00004 ATPase family associated with various cellular activities (AAA) JS522_RS01815 PF07724 AAA domain (Cdc48 subfamily) JS522_RS01815 PF17871 AAA lid domain JS522_RS01815 PF02861 Clp amino terminal domain, pathogenicity island component JS522_RS01815 PF10431 C-terminal, D2-small domain, of ClpB protein JS522_RS01825 PF13091 PLD-like domain JS522_RS01825 PF13396 Phospholipase_D-nuclease N-terminal JS522_RS01835 PF01597 Glycine cleavage H-protein JS522_RS01850 PF02508 Rnf-Nqr subunit, membrane protein JS522_RS01855 PF02508 Rnf-Nqr subunit, membrane protein JS522_RS01860 PF04205 FMN-binding domain JS522_RS01865 PF03116 NQR2, RnfD, RnfE family JS522_RS01880 PF08299 Bacterial dnaA protein helix-turn-helix JS522_RS01880 PF00308 Bacterial dnaA protein JS522_RS01880 PF11638 DnaA N-terminal domain JS522_RS01895 PF17377 Family of unknown function (DUF5399) JS522_RS01900 PF01795 MraW methylase family JS522_RS01910 PF00905 Penicillin binding protein transpeptidase domain JS522_RS01910 PF03717 Penicillin-binding Protein dimerisation domain JS522_RS01920 PF02875 Mur ligase family, glutamate ligase domain JS522_RS01920 PF01225 Mur ligase family, catalytic domain JS522_RS01920 PF08245 Mur ligase middle domain JS522_RS01925 PF01520 N-acetylmuramoyl-L-alanine amidase JS522_RS01925 PF08239 Bacterial SH3 domain JS522_RS01935 PF00216 Bacterial DNA-binding protein JS522_RS01945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JS522_RS01950 PF00664 ABC transporter transmembrane region JS522_RS01950 PF00005 ABC transporter JS522_RS01960 PF02621 Menaquinone biosynthesis JS522_RS02000 PF00849 RNA pseudouridylate synthase JS522_RS02000 PF01479 S4 domain JS522_RS02005 PF00730 HhH-GPD superfamily base excision DNA repair protein JS522_RS02005 PF14815 NUDIX domain JS522_RS02005 PF00633 Helix-hairpin-helix motif JS522_RS02020 PF02517 CPBP intramembrane metalloprotease JS522_RS02055 PF00266 Aminotransferase class-V JS522_RS02060 PF00571 CBS domain JS522_RS02060 PF03471 Transporter associated domain JS522_RS02065 PF03471 Transporter associated domain JS522_RS02065 PF01595 Cyclin M transmembrane N-terminal domain JS522_RS02065 PF00571 CBS domain JS522_RS02075 PF00692 dUTPase JS522_RS02080 PF17864 RuvB AAA lid domain JS522_RS02080 PF05491 RuvB C-terminal winged helix domain JS522_RS02080 PF05496 Holliday junction DNA helicase RuvB P-loop domain JS522_RS02085 PF08486 Stage II sporulation protein JS522_RS02090 PF00128 Alpha amylase, catalytic domain JS522_RS02090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JS522_RS02100 PF00436 Single-strand binding protein family JS522_RS02105 PF00883 Cytosol aminopeptidase family, catalytic domain JS522_RS02105 PF02789 Cytosol aminopeptidase family, N-terminal domain JS522_RS02110 PF07382 Histone H1-like nucleoprotein HC2 JS522_RS02140 PF06969 HemN C-terminal domain JS522_RS02140 PF04055 Radical SAM superfamily JS522_RS02150 PF16870 2-oxoglutarate dehydrogenase C-terminal JS522_RS02150 PF00676 Dehydrogenase E1 component JS522_RS02150 PF02779 Transketolase, pyrimidine binding domain JS522_RS02150 PF16078 2-oxoglutarate dehydrogenase N-terminus JS522_RS02155 PF02817 e3 binding domain JS522_RS02155 PF00364 Biotin-requiring enzyme JS522_RS02155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS522_RS02165 PF04551 GcpE protein JS522_RS02185 PF00111 2Fe-2S iron-sulfur cluster binding domain JS522_RS02195 PF00771 FHIPEP family JS522_RS02200 PF04539 Sigma-70 region 3 JS522_RS02200 PF04545 Sigma-70, region 4 JS522_RS02200 PF04542 Sigma-70 region 2 JS522_RS02210 PF00579 tRNA synthetases class I (W and Y) JS522_RS02210 PF01479 S4 domain JS522_RS02215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JS522_RS02215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JS522_RS02220 PF03144 Elongation factor Tu domain 2 JS522_RS02220 PF00009 Elongation factor Tu GTP binding domain JS522_RS02220 PF00679 Elongation factor G C-terminus JS522_RS02220 PF06421 GTP-binding protein LepA C-terminus JS522_RS02230 PF03219 TLC ATP/ADP transporter JS522_RS02240 PF01297 Zinc-uptake complex component A periplasmic JS522_RS02245 PF00005 ABC transporter JS522_RS02250 PF00950 ABC 3 transport family JS522_RS02250 PF02742 Iron dependent repressor, metal binding and dimerisation domain JS522_RS02255 PF00950 ABC 3 transport family JS522_RS02260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JS522_RS02260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JS522_RS02260 PF13288 DXP reductoisomerase C-terminal domain JS522_RS02265 PF02163 Peptidase family M50 JS522_RS02275 PF02463 RecF/RecN/SMC N terminal domain JS522_RS02280 PF00712 DNA polymerase III beta subunit, N-terminal domain JS522_RS02280 PF02767 DNA polymerase III beta subunit, central domain JS522_RS02280 PF02768 DNA polymerase III beta subunit, C-terminal domain JS522_RS02285 PF01668 SmpB protein JS522_RS02290 PF02424 ApbE family JS522_RS02295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JS522_RS02295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JS522_RS02305 PF17455 Late transcription unit B JS522_RS02325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JS522_RS02330 PF00830 Ribosomal L28 family JS522_RS02335 PF02446 4-alpha-glucanotransferase JS522_RS02350 PF00771 FHIPEP family JS522_RS02355 PF01312 FlhB HrpN YscU SpaS Family JS522_RS02360 PF06071 Protein of unknown function (DUF933) JS522_RS02360 PF01926 50S ribosome-binding GTPase JS522_RS02365 PF06574 FAD synthetase JS522_RS02365 PF01687 Riboflavin kinase JS522_RS02370 PF16198 tRNA pseudouridylate synthase B C-terminal domain JS522_RS02370 PF01509 TruB family pseudouridylate synthase (N terminal domain) JS522_RS02375 PF02033 Ribosome-binding factor A JS522_RS02380 PF00009 Elongation factor Tu GTP binding domain JS522_RS02380 PF11987 Translation-initiation factor 2 JS522_RS02385 PF08529 NusA N-terminal domain JS522_RS02385 PF13184 NusA-like KH domain JS522_RS02390 PF00575 S1 RNA binding domain JS522_RS02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS522_RS02400 PF01648 4'-phosphopantetheinyl transferase superfamily JS522_RS02410 PF01790 Prolipoprotein diacylglyceryl transferase JS522_RS02415 PF02096 60Kd inner membrane protein JS522_RS02420 PF00308 Bacterial dnaA protein JS522_RS02420 PF08299 Bacterial dnaA protein helix-turn-helix JS522_RS02430 PF00343 Carbohydrate phosphorylase JS522_RS02435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS522_RS02435 PF00364 Biotin-requiring enzyme JS522_RS02435 PF02817 e3 binding domain JS522_RS02440 PF00364 Biotin-requiring enzyme JS522_RS02440 PF02779 Transketolase, pyrimidine binding domain JS522_RS02440 PF02780 Transketolase, C-terminal domain JS522_RS02445 PF00676 Dehydrogenase E1 component JS522_RS02455 PF00132 Bacterial transferase hexapeptide (six repeats) JS522_RS02455 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JS522_RS02460 PF03938 Outer membrane protein (OmpH-like) JS522_RS02465 PF07244 Surface antigen variable number repeat JS522_RS02465 PF01103 Surface antigen JS522_RS02470 PF13662 Toprim domain JS522_RS02475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JS522_RS02475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JS522_RS02480 PF00698 Acyl transferase domain JS522_RS02490 PF00550 Phosphopantetheine attachment site JS522_RS02515 PF00209 Sodium:neurotransmitter symporter family JS522_RS02520 PF00375 Sodium:dicarboxylate symporter family JS522_RS02535 PF00571 CBS domain JS522_RS02535 PF01769 Divalent cation transporter JS522_RS02535 PF03448 MgtE intracellular N domain JS522_RS02545 PF13520 Amino acid permease JS522_RS02550 PF01791 DeoC/LacD family aldolase JS522_RS02560 PF00005 ABC transporter JS522_RS02560 PF09383 NIL domain JS522_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS02570 PF03180 NLPA lipoprotein JS522_RS02585 PF01751 Toprim domain JS522_RS02585 PF00204 DNA gyrase B JS522_RS02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS522_RS02585 PF00986 DNA gyrase B subunit, carboxyl terminus JS522_RS02590 PF00521 DNA gyrase/topoisomerase IV, subunit A JS522_RS02590 PF03989 DNA gyrase C-terminal domain, beta-propeller JS522_RS02595 PF02223 Thymidylate kinase JS522_RS02610 PF01300 Telomere recombination JS522_RS02610 PF03481 Putative GTP-binding controlling metal-binding JS522_RS02640 PF02441 Flavoprotein JS522_RS02645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS522_RS02645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS522_RS02660 PF01975 Survival protein SurE JS522_RS02665 PF01171 PP-loop family JS522_RS02670 PF02810 SEC-C motif JS522_RS02670 PF07517 SecA DEAD-like domain JS522_RS02670 PF01043 SecA preprotein cross-linking domain JS522_RS02670 PF07516 SecA Wing and Scaffold domain JS522_RS02700 PF00919 Uncharacterized protein family UPF0004 JS522_RS02700 PF18693 TRAM domain JS522_RS02700 PF04055 Radical SAM superfamily JS522_RS02705 PF00471 Ribosomal protein L33 JS522_RS02715 PF00005 ABC transporter JS522_RS02725 PF00572 Ribosomal protein L13 JS522_RS02730 PF00380 Ribosomal protein S9/S16 JS522_RS02760 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JS522_RS02765 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JS522_RS02765 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JS522_RS02770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS522_RS02775 PF00814 Glycoprotease family JS522_RS02785 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS02790 PF00005 ABC transporter JS522_RS02805 PF03631 Virulence factor BrkB JS522_RS02820 PF00834 Ribulose-phosphate 3 epimerase family JS522_RS02825 PF08207 Elongation factor P (EF-P) KOW-like domain JS522_RS02825 PF01132 Elongation factor P (EF-P) OB domain JS522_RS02825 PF09285 Elongation factor P, C-terminal JS522_RS02830 PF00364 Biotin-requiring enzyme JS522_RS02835 PF00289 Biotin carboxylase, N-terminal domain JS522_RS02835 PF02785 Biotin carboxylase C-terminal domain JS522_RS02835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JS522_RS02880 PF00571 CBS domain JS522_RS02880 PF00478 IMP dehydrogenase / GMP reductase domain JS522_RS02910 PF01702 Queuine tRNA-ribosyltransferase JS522_RS02930 PF02600 Disulfide bond formation protein DsbB JS522_RS02950 PF00005 ABC transporter JS522_RS02975 PF02348 Cytidylyltransferase JS522_RS02980 PF06418 CTP synthase N-terminus JS522_RS02980 PF00117 Glutamine amidotransferase class-I JS522_RS02985 PF03652 Holliday junction resolvase JS522_RS02990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS522_RS02995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS522_RS03000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS522_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS03010 PF12911 N-terminal TM domain of oligopeptide transport permease C JS522_RS03015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS522_RS03015 PF00005 ABC transporter JS522_RS03020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS522_RS03020 PF00005 ABC transporter JS522_RS03025 PF06685 Protein of unknown function (DUF1186) JS522_RS03030 PF00939 Sodium:sulfate symporter transmembrane region JS522_RS03035 PF00365 Phosphofructokinase JS522_RS03045 PF00365 Phosphofructokinase JS522_RS03060 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JS522_RS03065 PF08264 Anticodon-binding domain of tRNA JS522_RS03065 PF13603 Leucyl-tRNA synthetase, Domain 2 JS522_RS03065 PF09334 tRNA synthetases class I (M) JS522_RS03075 PF01494 FAD binding domain JS522_RS03085 PF03120 NAD-dependent DNA ligase OB-fold domain JS522_RS03085 PF12826 Helix-hairpin-helix motif JS522_RS03085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JS522_RS03085 PF00533 BRCA1 C Terminus (BRCT) domain JS522_RS03085 PF01653 NAD-dependent DNA ligase adenylation domain JS522_RS03090 PF00069 Protein kinase domain JS522_RS03090 PF03781 Sulfatase-modifying factor enzyme 1 JS522_RS03130 PF00004 ATPase family associated with various cellular activities (AAA) JS522_RS03130 PF10431 C-terminal, D2-small domain, of ClpB protein JS522_RS03130 PF17871 AAA lid domain JS522_RS03130 PF02861 Clp amino terminal domain, pathogenicity island component JS522_RS03130 PF07724 AAA domain (Cdc48 subfamily) JS522_RS03140 PF00005 ABC transporter JS522_RS03145 PF02405 Permease MlaE JS522_RS03150 PF00202 Aminotransferase class-III JS522_RS03155 PF02622 Uncharacterized ACR, COG1678 JS522_RS03165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JS522_RS03185 PF01784 NIF3 (NGG1p interacting factor 3) JS522_RS03190 PF08439 Oligopeptidase F JS522_RS03190 PF01432 Peptidase family M3 JS522_RS03195 PF00166 Chaperonin 10 Kd subunit JS522_RS03200 PF00118 TCP-1/cpn60 chaperonin family JS522_RS03220 PF09825 Biotin-protein ligase, N terminal JS522_RS03225 PF00892 EamA-like transporter family JS522_RS03230 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JS522_RS03230 PF14490 Helix-hairpin-helix containing domain JS522_RS03230 PF13538 UvrD-like helicase C-terminal domain JS522_RS03235 PF08264 Anticodon-binding domain of tRNA JS522_RS03235 PF09334 tRNA synthetases class I (M) JS522_RS03245 PF00625 Guanylate kinase JS522_RS03250 PF01351 Ribonuclease HII JS522_RS03255 PF01245 Ribosomal protein L19 JS522_RS03260 PF01746 tRNA (Guanine-1)-methyltransferase JS522_RS03265 PF00886 Ribosomal protein S16 JS522_RS03270 PF02978 Signal peptide binding domain JS522_RS03270 PF02881 SRP54-type protein, helical bundle domain JS522_RS03270 PF00448 SRP54-type protein, GTPase domain JS522_RS03275 PF05175 Methyltransferase small domain JS522_RS03275 PF17827 PrmC N-terminal domain JS522_RS03280 PF03462 PCRF domain JS522_RS03280 PF00472 RF-1 domain JS522_RS03285 PF01197 Ribosomal protein L31 JS522_RS03295 PF10502 Signal peptidase, peptidase S26 JS522_RS03300 PF00133 tRNA synthetases class I (I, L, M and V) JS522_RS03300 PF08264 Anticodon-binding domain of tRNA JS522_RS03315 PF13638 PIN domain JS522_RS03315 PF02562 PhoH-like protein JS522_RS03335 PF02322 Cytochrome bd terminal oxidase subunit II JS522_RS03340 PF01654 Cytochrome bd terminal oxidase subunit I JS522_RS03345 PF02457 DisA bacterial checkpoint controller nucleotide-binding JS522_RS03365 PF00224 Pyruvate kinase, barrel domain JS522_RS03365 PF02887 Pyruvate kinase, alpha/beta domain JS522_RS03370 PF17760 UvrA interaction domain JS522_RS03370 PF17755 UvrA DNA-binding domain JS522_RS03375 PF00069 Protein kinase domain JS522_RS03380 PF00133 tRNA synthetases class I (I, L, M and V) JS522_RS03380 PF08264 Anticodon-binding domain of tRNA JS522_RS03400 PF01813 ATP synthase subunit D JS522_RS03405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS522_RS03405 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS522_RS03410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS522_RS03410 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS522_RS03410 PF16886 ATPsynthase alpha/beta subunit N-term extension JS522_RS03415 PF10962 Protein of unknown function (DUF2764) JS522_RS03420 PF06188 HrpE/YscL/FliH and V-type ATPase subunit E JS522_RS03435 PF00923 Transaldolase/Fructose-6-phosphate aldolase JS522_RS03440 PF04997 RNA polymerase Rpb1, domain 1 JS522_RS03440 PF04998 RNA polymerase Rpb1, domain 5 JS522_RS03440 PF04983 RNA polymerase Rpb1, domain 3 JS522_RS03440 PF05000 RNA polymerase Rpb1, domain 4 JS522_RS03440 PF00623 RNA polymerase Rpb1, domain 2 JS522_RS03445 PF04560 RNA polymerase Rpb2, domain 7 JS522_RS03445 PF04561 RNA polymerase Rpb2, domain 2 JS522_RS03445 PF00562 RNA polymerase Rpb2, domain 6 JS522_RS03445 PF04563 RNA polymerase beta subunit JS522_RS03445 PF10385 RNA polymerase beta subunit external 1 domain JS522_RS03445 PF04565 RNA polymerase Rpb2, domain 3 JS522_RS03450 PF16320 Ribosomal protein L7/L12 dimerisation domain JS522_RS03450 PF00542 Ribosomal protein L7/L12 C-terminal domain JS522_RS03455 PF00466 Ribosomal protein L10 JS522_RS03460 PF00687 Ribosomal protein L1p/L10e family JS522_RS03465 PF03946 Ribosomal protein L11, N-terminal domain JS522_RS03465 PF00298 Ribosomal protein L11, RNA binding domain JS522_RS03470 PF02357 Transcription termination factor nusG JS522_RS03485 PF03144 Elongation factor Tu domain 2 JS522_RS03485 PF00009 Elongation factor Tu GTP binding domain JS522_RS03485 PF03143 Elongation factor Tu C-terminal domain JS522_RS03495 PF01176 Translation initiation factor 1A / IF-1 JS522_RS03515 PF02632 BioY family JS522_RS03540 PF00701 Dihydrodipicolinate synthetase family JS522_RS03545 PF00696 Amino acid kinase family JS522_RS03550 PF01118 Semialdehyde dehydrogenase, NAD binding domain JS522_RS03550 PF02774 Semialdehyde dehydrogenase, dimerisation domain JS522_RS03555 PF01113 Dihydrodipicolinate reductase, N-terminus JS522_RS03555 PF05173 Dihydrodipicolinate reductase, C-terminus JS522_RS03560 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JS522_RS03570 PF02902 Ulp1 protease family, C-terminal catalytic domain JS522_RS03580 PF04055 Radical SAM superfamily JS522_RS03580 PF06968 Biotin and Thiamin Synthesis associated domain JS522_RS03585 PF00155 Aminotransferase class I and II JS522_RS03595 PF00202 Aminotransferase class-III JS522_RS03605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JS522_RS03610 PF01202 Shikimate kinase JS522_RS03615 PF01264 Chorismate synthase JS522_RS03620 PF01761 3-dehydroquinate synthase JS522_RS03625 PF01487 Type I 3-dehydroquinase JS522_RS03625 PF01488 Shikimate / quinate 5-dehydrogenase JS522_RS03625 PF08501 Shikimate dehydrogenase substrate binding domain JS522_RS03630 PF11019 Protein of unknown function (DUF2608) JS522_RS03635 PF04966 Carbohydrate-selective porin, OprB family JS522_RS03640 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) JS522_RS03645 PF13520 Amino acid permease JS522_RS03650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JS522_RS03650 PF01266 FAD dependent oxidoreductase JS522_RS03660 PF00056 lactate/malate dehydrogenase, NAD binding domain JS522_RS03660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JS522_RS03665 PF17446 Late transcription unit A JS522_RS03670 PF00342 Phosphoglucose isomerase JS522_RS03675 PF02899 Phage integrase, N-terminal SAM-like domain JS522_RS03675 PF00589 Phage integrase family JS522_RS03715 PF02401 LytB protein JS522_RS03720 PF03572 Peptidase family S41 JS522_RS03720 PF17816 PDZ domain JS522_RS03725 PF03600 Citrate transporter JS522_RS03730 PF01740 STAS domain JS522_RS03730 PF00916 Sulfate permease family JS522_RS03735 PF00206 Lyase JS522_RS03735 PF10415 Fumarase C C-terminus JS522_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component JS522_RS03755 PF01914 MarC family integral membrane protein JS522_RS03760 PF00557 Metallopeptidase family M24 JS522_RS03760 PF02810 SEC-C motif JS522_RS03800 PF14437 MafB19-like deaminase JS522_RS03805 PF00312 Ribosomal protein S15 JS522_RS03810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JS522_RS03810 PF01138 3' exoribonuclease family, domain 1 JS522_RS03810 PF00575 S1 RNA binding domain JS522_RS03810 PF00013 KH domain JS522_RS03810 PF03725 3' exoribonuclease family, domain 2 JS522_RS03815 PF01434 Peptidase family M41 JS522_RS03815 PF17862 AAA+ lid domain JS522_RS03815 PF00004 ATPase family associated with various cellular activities (AAA) JS522_RS03820 PF01171 PP-loop family JS522_RS03845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JS522_RS03845 PF01409 tRNA synthetases class II core domain (F) JS522_RS03850 PF00453 Ribosomal protein L20 JS522_RS03855 PF01632 Ribosomal protein L35 JS522_RS03860 PF00707 Translation initiation factor IF-3, C-terminal domain JS522_RS03860 PF05198 Translation initiation factor IF-3, N-terminal domain JS522_RS03865 PF01029 NusB family JS522_RS03870 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JS522_RS03870 PF01565 FAD binding domain JS522_RS03885 PF02390 Putative methyltransferase JS522_RS03890 PF00268 Ribonucleotide reductase, small chain JS522_RS03895 PF02867 Ribonucleotide reductase, barrel domain JS522_RS03895 PF03477 ATP cone domain JS522_RS03895 PF00317 Ribonucleotide reductase, all-alpha domain JS522_RS03900 PF01066 CDP-alcohol phosphatidyltransferase JS522_RS03905 PF02646 RmuC family JS522_RS03915 PF01546 Peptidase family M20/M25/M40 JS522_RS03915 PF07687 Peptidase dimerisation domain JS522_RS03920 PF17820 PDZ domain JS522_RS03920 PF13180 PDZ domain JS522_RS03925 PF00549 CoA-ligase JS522_RS03925 PF02629 CoA binding domain JS522_RS03930 PF00549 CoA-ligase JS522_RS03930 PF08442 ATP-grasp domain JS522_RS03935 PF00448 SRP54-type protein, GTPase domain JS522_RS03940 PF01027 Inhibitor of apoptosis-promoting Bax1 JS522_RS03945 PF03222 Tryptophan/tyrosine permease family JS522_RS03950 PF01380 SIS domain JS522_RS03955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JS522_RS03955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JS522_RS03955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JS522_RS03955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JS522_RS03960 PF12626 Polymerase A arginine-rich C-terminus JS522_RS03960 PF12627 Probable RNA and SrmB- binding site of polymerase A JS522_RS03960 PF01743 Poly A polymerase head domain JS522_RS03965 PF07578 Lipid A Biosynthesis N-terminal domain JS522_RS03965 PF02684 Lipid-A-disaccharide synthetase JS522_RS04030 PF03797 Autotransporter beta-domain JS522_RS04030 PF07548 Chlamydia polymorphic membrane protein middle domain JS522_RS04035 PF02504 Fatty acid synthesis protein JS522_RS04040 PF01783 Ribosomal L32p protein family JS522_RS04050 PF00575 S1 RNA binding domain JS522_RS04050 PF10150 Ribonuclease E/G family JS522_RS04075 PF00288 GHMP kinases N terminal domain JS522_RS04080 PF03948 Ribosomal protein L9, C-terminal domain JS522_RS04080 PF01281 Ribosomal protein L9, N-terminal domain JS522_RS04085 PF01084 Ribosomal protein S18 JS522_RS04090 PF01250 Ribosomal protein S6 JS522_RS04095 PF01195 Peptidyl-tRNA hydrolase JS522_RS04100 PF01386 Ribosomal L25p family JS522_RS04100 PF14693 Ribosomal protein TL5, C-terminal domain JS522_RS04110 PF00534 Glycosyl transferases group 1 JS522_RS04110 PF08323 Starch synthase catalytic domain JS522_RS04115 PF01066 CDP-alcohol phosphatidyltransferase JS522_RS04120 PF02092 Glycyl-tRNA synthetase beta subunit JS522_RS04120 PF02091 Glycyl-tRNA synthetase alpha subunit JS522_RS04145 PF08275 DNA primase catalytic core, N-terminal domain JS522_RS04145 PF01807 CHC2 zinc finger JS522_RS04150 PF05188 MutS domain II JS522_RS04150 PF01624 MutS domain I JS522_RS04150 PF05192 MutS domain III JS522_RS04150 PF05190 MutS family domain IV JS522_RS04150 PF00488 MutS domain V JS522_RS04155 PF01541 GIY-YIG catalytic domain JS522_RS04155 PF08459 UvrC Helix-hairpin-helix N-terminal JS522_RS04170 PF00253 Ribosomal protein S14p/S29e JS522_RS04175 PF00444 Ribosomal protein L36 JS522_RS04180 PF00468 Ribosomal protein L34 JS522_RS04185 PF00825 Ribonuclease P JS522_RS04195 PF01406 tRNA synthetases class I (C) catalytic domain JS522_RS04195 PF09190 DALR domain JS522_RS04200 PF00152 tRNA synthetases class II (D, K and N) JS522_RS04200 PF01336 OB-fold nucleic acid binding domain JS522_RS04215 PF04851 Type III restriction enzyme, res subunit JS522_RS04215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JS522_RS04215 PF18074 Primosomal protein N C-terminal domain JS522_RS04215 PF17764 3′ DNA-binding domain (3′BD) JS522_RS04215 PF00271 Helicase conserved C-terminal domain JS522_RS04220 PF00155 Aminotransferase class I and II JS522_RS04225 PF00501 AMP-binding enzyme JS522_RS04225 PF01553 Acyltransferase JS522_RS04235 PF00459 Inositol monophosphatase family JS522_RS04240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JS522_RS04240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JS522_RS04245 PF00719 Inorganic pyrophosphatase JS522_RS04250 PF00293 NUDIX domain JS522_RS04255 PF00109 Beta-ketoacyl synthase, N-terminal domain JS522_RS04255 PF02801 Beta-ketoacyl synthase, C-terminal domain JS522_RS04275 PF04055 Radical SAM superfamily JS522_RS04305 PF02875 Mur ligase family, glutamate ligase domain JS522_RS04305 PF01225 Mur ligase family, catalytic domain JS522_RS04305 PF01820 D-ala D-ala ligase N-terminus JS522_RS04305 PF07478 D-ala D-ala ligase C-terminus JS522_RS04305 PF08245 Mur ligase middle domain JS522_RS04310 PF04101 Glycosyltransferase family 28 C-terminal domain JS522_RS04310 PF03033 Glycosyltransferase family 28 N-terminal domain JS522_RS04315 PF01098 Cell cycle protein JS522_RS04320 PF01476 LysM domain JS522_RS04320 PF00877 NlpC/P60 family JS522_RS04325 PF02875 Mur ligase family, glutamate ligase domain JS522_RS04325 PF08245 Mur ligase middle domain JS522_RS04330 PF00953 Glycosyl transferase family 4 JS522_RS04335 PF01225 Mur ligase family, catalytic domain JS522_RS04335 PF02875 Mur ligase family, glutamate ligase domain JS522_RS04335 PF08245 Mur ligase middle domain JS522_RS04345 PF00118 TCP-1/cpn60 chaperonin family JS522_RS04360 PF09285 Elongation factor P, C-terminal JS522_RS04360 PF01132 Elongation factor P (EF-P) OB domain JS522_RS04360 PF08207 Elongation factor P (EF-P) KOW-like domain JS522_RS04370 PF00456 Transketolase, thiamine diphosphate binding domain JS522_RS04370 PF02779 Transketolase, pyrimidine binding domain JS522_RS04370 PF02780 Transketolase, C-terminal domain JS522_RS04375 PF01411 tRNA synthetases class II (A) JS522_RS04375 PF02272 DHHA1 domain JS522_RS04375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JS522_RS04380 PF17757 UvrB interaction domain JS522_RS04380 PF02559 CarD-like/TRCF domain JS522_RS04380 PF00270 DEAD/DEAH box helicase JS522_RS04380 PF00271 Helicase conserved C-terminal domain JS522_RS04380 PF03461 TRCF domain JS522_RS04385 PF01208 Uroporphyrinogen decarboxylase (URO-D) JS522_RS04390 PF04055 Radical SAM superfamily JS522_RS04390 PF06969 HemN C-terminal domain JS522_RS04395 PF01593 Flavin containing amine oxidoreductase JS522_RS04405 PF07432 Histone H1-like protein Hc1 JS522_RS04410 PF05958 tRNA (Uracil-5-)-methyltransferase JS522_RS04415 PF02699 Preprotein translocase subunit JS522_RS04420 PF00175 Oxidoreductase NAD-binding domain JS522_RS04420 PF00111 2Fe-2S iron-sulfur cluster binding domain JS522_RS04450 PF01580 FtsK/SpoIIIE family JS522_RS04450 PF17854 FtsK alpha domain JS522_RS04450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JS522_RS04450 PF09397 Ftsk gamma domain JS522_RS04455 PF00753 Metallo-beta-lactamase superfamily JS522_RS04465 PF01161 Phosphatidylethanolamine-binding protein JS522_RS04470 PF01235 Sodium:alanine symporter family JS522_RS04485 PF00885 6,7-dimethyl-8-ribityllumazine synthase JS522_RS04490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JS522_RS04490 PF00925 GTP cyclohydrolase II JS522_RS04495 PF01872 RibD C-terminal domain JS522_RS04495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JS522_RS04500 PF02403 Seryl-tRNA synthetase N-terminal domain JS522_RS04500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS522_RS04510 PF00403 Heavy-metal-associated domain JS522_RS04515 PF01098 Cell cycle protein JS522_RS04520 PF02237 Biotin protein ligase C terminal domain JS522_RS04520 PF03099 Biotin/lipoate A/B protein ligase family JS522_RS04530 PF00849 RNA pseudouridylate synthase JS522_RS04530 PF01479 S4 domain JS522_RS04535 PF00300 Histidine phosphatase superfamily (branch 1) JS522_RS04550 PF08345 Flagellar M-ring protein C-terminal JS522_RS04550 PF01514 Secretory protein of YscJ/FliF family JS522_RS04560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS522_RS04560 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS522_RS04560 PF18269 T3SS EscN ATPase C-terminal domain JS522_RS04575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JS522_RS04575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JS522_RS04595 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JS522_RS04595 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JS522_RS04605 PF00271 Helicase conserved C-terminal domain JS522_RS04605 PF00176 SNF2 family N-terminal domain JS522_RS04605 PF04434 SWIM zinc finger JS522_RS04615 PF05698 Bacterial trigger factor protein (TF) C-terminus JS522_RS04615 PF05697 Bacterial trigger factor protein (TF) JS522_RS04620 PF00574 Clp protease JS522_RS04625 PF06689 ClpX C4-type zinc finger JS522_RS04625 PF10431 C-terminal, D2-small domain, of ClpB protein JS522_RS04625 PF07724 AAA domain (Cdc48 subfamily) JS522_RS04630 PF13735 tRNA nucleotidyltransferase domain 2 putative JS522_RS04630 PF01743 Poly A polymerase head domain JS522_RS04630 PF12627 Probable RNA and SrmB- binding site of polymerase A JS522_RS04635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JS522_RS04635 PF01926 50S ribosome-binding GTPase JS522_RS04645 PF01043 SecA preprotein cross-linking domain JS522_RS04645 PF07516 SecA Wing and Scaffold domain JS522_RS04645 PF07517 SecA DEAD-like domain JS522_RS04655 PF02666 Phosphatidylserine decarboxylase JS522_RS04660 PF01926 50S ribosome-binding GTPase JS522_RS04660 PF12631 MnmE helical domain JS522_RS04660 PF10396 GTP-binding protein TrmE N-terminus JS522_RS04665 PF10576 Iron-sulfur binding domain of endonuclease III JS522_RS04665 PF00633 Helix-hairpin-helix motif JS522_RS04665 PF00730 HhH-GPD superfamily base excision DNA repair protein JS522_RS04670 PF05525 Branched-chain amino acid transport protein JS522_RS04675 PF00271 Helicase conserved C-terminal domain JS522_RS04675 PF12419 SNF2 Helicase protein JS522_RS04675 PF00176 SNF2 family N-terminal domain JS522_RS04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS522_RS04685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JS522_RS04690 PF04055 Radical SAM superfamily JS522_RS04695 PF01514 Secretory protein of YscJ/FliF family JS522_RS04705 PF02108 Flagellar assembly protein FliH JS522_RS04710 PF00813 FliP family JS522_RS04715 PF01313 Bacterial export proteins, family 3 JS522_RS04720 PF01311 Bacterial export proteins, family 1 JS522_RS04745 PF07963 Prokaryotic N-terminal methylation motif JS522_RS04750 PF00482 Type II secretion system (T2SS), protein F JS522_RS04755 PF00437 Type II/IV secretion system protein JS522_RS04760 PF11741 AMIN domain JS522_RS04760 PF00263 Bacterial type II and III secretion system protein JS522_RS04760 PF03958 Bacterial type II/III secretion system short domain JS522_RS04760 PF07660 Secretin and TonB N terminus short domain JS522_RS04770 PF01321 Creatinase/Prolidase N-terminal domain JS522_RS04770 PF00557 Metallopeptidase family M24 JS522_RS04775 PF01119 DNA mismatch repair protein, C-terminal domain JS522_RS04775 PF08676 MutL C terminal dimerisation domain JS522_RS04795 PF04888 Secretion system effector C (SseC) like family JS522_RS04800 PF00892 EamA-like transporter family JS522_RS04805 PF02824 TGS domain JS522_RS04805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS522_RS04805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JS522_RS04805 PF03129 Anticodon binding domain JS522_RS04810 PF13614 AAA domain JS522_RS04815 PF03677 Uncharacterised protein family (UPF0137) JS522_RS04820 PF17435 Family of unknown function (DUF5414) JS522_RS04825 PF00579 tRNA synthetases class I (W and Y) JS522_RS04830 PF17757 UvrB interaction domain JS522_RS04830 PF00271 Helicase conserved C-terminal domain JS522_RS04830 PF04851 Type III restriction enzyme, res subunit JS522_RS04830 PF02151 UvrB/uvrC motif JS522_RS04830 PF12344 Ultra-violet resistance protein B JS522_RS04835 PF00113 Enolase, C-terminal TIM barrel domain JS522_RS04835 PF03952 Enolase, N-terminal domain JS522_RS04860 PF13183 4Fe-4S dicluster domain JS522_RS04860 PF13085 2Fe-2S iron-sulfur cluster binding domain JS522_RS04865 PF00890 FAD binding domain JS522_RS04865 PF02910 Fumarate reductase flavoprotein C-term JS522_RS04875 PF01026 TatD related DNase JS522_RS04885 PF01618 MotA/TolQ/ExbB proton channel family JS522_RS04890 PF02472 Biopolymer transport protein ExbD/TolR JS522_RS04900 PF07676 WD40-like Beta Propeller Repeat JS522_RS04905 PF00691 OmpA family JS522_RS04920 PF10417 C-terminal domain of 1-Cys peroxiredoxin JS522_RS04920 PF00578 AhpC/TSA family JS522_RS04930 PF00118 TCP-1/cpn60 chaperonin family JS522_RS04935 PF07075 Protein of unknown function (DUF1343) JS522_RS04940 PF01725 Ham1 family JS522_RS04950 PF03167 Uracil DNA glycosylase superfamily JS522_RS04955 PF00580 UvrD/REP helicase N-terminal domain JS522_RS04955 PF13361 UvrD-like helicase C-terminal domain JS522_RS04960 PF04552 Sigma-54, DNA binding domain JS522_RS04960 PF04963 Sigma-54 factor, core binding domain JS522_RS04960 PF00309 Sigma-54 factor, Activator interacting domain (AID) JS522_RS04970 PF01751 Toprim domain JS522_RS04970 PF01131 DNA topoisomerase JS522_RS04970 PF01396 Topoisomerase DNA binding C4 zinc finger JS522_RS04975 PF01207 Dihydrouridine synthase (Dus) JS522_RS04980 PF02325 YGGT family JS522_RS05000 PF01812 5-formyltetrahydrofolate cyclo-ligase family JS522_RS05005 PF00154 recA bacterial DNA recombination protein JS522_RS05010 PF03070 TENA/THI-4/PQQC family JS522_RS05020 PF00186 Dihydrofolate reductase JS522_RS05025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JS522_RS05025 PF00809 Pterin binding enzyme JS522_RS05030 PF02152 Dihydroneopterin aldolase JS522_RS05035 PF04545 Sigma-70, region 4 JS522_RS05035 PF04539 Sigma-70 region 3 JS522_RS05035 PF04542 Sigma-70 region 2 JS522_RS05035 PF00140 Sigma-70 factor, region 1.2 JS522_RS05035 PF03979 Sigma-70 factor, region 1.1 JS522_RS05040 PF06785 Uncharacterised protein family (UPF0242) N-terminus JS522_RS05040 PF18095 UPF0242 C-terminal PAS-like domain JS522_RS05045 PF01649 Ribosomal protein S20 JS522_RS05055 PF13538 UvrD-like helicase C-terminal domain JS522_RS05065 PF00486 Transcriptional regulatory protein, C terminal JS522_RS05070 PF14602 Hexapeptide repeat of succinyl-transferase JS522_RS05070 PF00132 Bacterial transferase hexapeptide (six repeats) JS522_RS05070 PF12804 MobA-like NTP transferase domain JS522_RS05075 PF00348 Polyprenyl synthetase JS522_RS05090 PF02511 Thymidylate synthase complementing protein