locus-tag	class	description
NC80_RS00005	PF00490	Delta-aminolevulinic acid dehydratase
NC80_RS00010	PF05896	Na(+)-translocating NADH-quinone reductase subunit A (NQRA)
NC80_RS00010	PF11973	NQRA C-terminal domain
NC80_RS00020	PF01272	Transcription elongation factor, GreA/GreB, C-term
NC80_RS00020	PF03449	Transcription elongation factor, N-terminal
NC80_RS00030	PF00155	Aminotransferase class I and II
NC80_RS00040	PF00580	UvrD/REP helicase N-terminal domain
NC80_RS00040	PF13361	UvrD-like helicase C-terminal domain
NC80_RS00050	PF07690	Major Facilitator Superfamily
NC80_RS00065	PF01131	DNA topoisomerase
NC80_RS00065	PF01751	Toprim domain
NC80_RS00065	PF01396	Topoisomerase DNA binding C4 zinc finger
NC80_RS00070	PF01207	Dihydrouridine synthase (Dus)
NC80_RS00090	PF01812	5-formyltetrahydrofolate cyclo-ligase family
NC80_RS00095	PF00154	recA bacterial DNA recombination protein
NC80_RS00105	PF13538	UvrD-like helicase C-terminal domain
NC80_RS00115	PF00005	ABC transporter
NC80_RS00125	PF00793	DAHP synthetase I family
NC80_RS00145	PF00849	RNA pseudouridylate synthase
NC80_RS00145	PF01479	S4 domain
NC80_RS00155	PF00521	DNA gyrase/topoisomerase IV, subunit A
NC80_RS00160	PF00204	DNA gyrase B
NC80_RS00160	PF00986	DNA gyrase B subunit, carboxyl terminus
NC80_RS00160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NC80_RS00160	PF01751	Toprim domain
NC80_RS00165	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
NC80_RS00170	PF05932	Tir chaperone protein (CesT) family
NC80_RS00180	PF17376	Family of unknown function (DUF5398)
NC80_RS00185	PF17401	Family of unknown function (DUF5407)
NC80_RS00200	PF18269	T3SS EscN ATPase C-terminal domain
NC80_RS00200	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NC80_RS00200	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NC80_RS00210	PF17458	Family of unknown function (DUF5421)
NC80_RS00220	PF03793	PASTA domain
NC80_RS00220	PF00069	Protein kinase domain
NC80_RS00225	PF00263	Bacterial type II and III secretion system protein
NC80_RS00225	PF03958	Bacterial type II/III secretion system short domain
NC80_RS00235	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
NC80_RS00255	PF01765	Ribosome recycling factor
NC80_RS00260	PF00696	Amino acid kinase family
NC80_RS00265	PF00889	Elongation factor TS
NC80_RS00270	PF00318	Ribosomal protein S2
NC80_RS00280	PF01308	Chlamydia major outer membrane protein
NC80_RS00285	PF00905	Penicillin binding protein transpeptidase domain
NC80_RS00285	PF03717	Penicillin-binding Protein dimerisation domain
NC80_RS00295	PF01458	Uncharacterized protein family (UPF0051)
NC80_RS00300	PF00005	ABC transporter
NC80_RS00305	PF01458	Uncharacterized protein family (UPF0051)
NC80_RS00310	PF00266	Aminotransferase class-V
NC80_RS00315	PF02195	ParB-like nuclease domain
NC80_RS00315	PF17762	HTH domain found in ParB protein
NC80_RS00320	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
NC80_RS00320	PF00005	ABC transporter
NC80_RS00325	PF00005	ABC transporter
NC80_RS00325	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
NC80_RS00330	PF01865	Protein of unknown function DUF47
NC80_RS00335	PF01384	Phosphate transporter family
NC80_RS00340	PF00162	Phosphoglycerate kinase
NC80_RS00360	PF00633	Helix-hairpin-helix motif
NC80_RS00360	PF10576	Iron-sulfur binding domain of endonuclease III
NC80_RS00360	PF00730	HhH-GPD superfamily base excision DNA repair protein
NC80_RS00365	PF01926	50S ribosome-binding GTPase
NC80_RS00365	PF12631	MnmE helical domain
NC80_RS00365	PF10396	GTP-binding protein TrmE N-terminus
NC80_RS00370	PF02666	Phosphatidylserine decarboxylase
NC80_RS00380	PF01043	SecA preprotein cross-linking domain
NC80_RS00380	PF07517	SecA DEAD-like domain
NC80_RS00380	PF07516	SecA Wing and Scaffold domain
NC80_RS00390	PF01926	50S ribosome-binding GTPase
NC80_RS00390	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
NC80_RS00395	PF01743	Poly A polymerase head domain
NC80_RS00395	PF12627	Probable RNA and SrmB- binding site of polymerase A
NC80_RS00395	PF13735	tRNA nucleotidyltransferase domain 2 putative
NC80_RS00400	PF10431	C-terminal, D2-small domain, of ClpB protein 
NC80_RS00400	PF06689	ClpX C4-type zinc finger
NC80_RS00400	PF07724	AAA domain (Cdc48 subfamily)
NC80_RS00405	PF00574	Clp protease
NC80_RS00410	PF05697	Bacterial trigger factor protein (TF)
NC80_RS00410	PF05698	Bacterial trigger factor protein (TF) C-terminus
NC80_RS00420	PF04434	SWIM zinc finger
NC80_RS00420	PF00271	Helicase conserved C-terminal domain
NC80_RS00420	PF00176	SNF2 family N-terminal domain
NC80_RS00430	PF17297	Phosphoenolpyruvate carboxykinase N-terminal domain
NC80_RS00430	PF00821	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
NC80_RS00445	PF01308	Chlamydia major outer membrane protein
NC80_RS00450	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NC80_RS00450	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NC80_RS00455	PF01704	UTP--glucose-1-phosphate uridylyltransferase
NC80_RS00465	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NC80_RS00465	PF18269	T3SS EscN ATPase C-terminal domain
NC80_RS00465	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NC80_RS00475	PF14842	FliG N-terminal domain
NC80_RS00475	PF01706	FliG C-terminal domain
NC80_RS00475	PF14841	FliG middle domain
NC80_RS00485	PF00266	Aminotransferase class-V
NC80_RS00490	PF00300	Histidine phosphatase superfamily (branch 1)
NC80_RS00495	PF01479	S4 domain
NC80_RS00495	PF00849	RNA pseudouridylate synthase
NC80_RS00505	PF03099	Biotin/lipoate A/B protein ligase family
NC80_RS00505	PF02237	Biotin protein ligase C terminal domain
NC80_RS00505	PF08279	HTH domain
NC80_RS00510	PF01098	Cell cycle protein
NC80_RS00515	PF00403	Heavy-metal-associated domain
NC80_RS00525	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NC80_RS00525	PF02403	Seryl-tRNA synthetase N-terminal domain
NC80_RS00530	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
NC80_RS00530	PF01872	RibD C-terminal domain
NC80_RS00535	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
NC80_RS00535	PF00925	GTP cyclohydrolase II
NC80_RS00540	PF00885	6,7-dimethyl-8-ribityllumazine synthase
NC80_RS00555	PF01235	Sodium:alanine symporter family
NC80_RS00560	PF01161	Phosphatidylethanolamine-binding protein
NC80_RS00570	PF00753	Metallo-beta-lactamase superfamily
NC80_RS00575	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
NC80_RS00575	PF17854	FtsK alpha domain
NC80_RS00575	PF01580	FtsK/SpoIIIE family
NC80_RS00575	PF09397	Ftsk gamma domain
NC80_RS00605	PF00111	2Fe-2S iron-sulfur cluster binding domain
NC80_RS00605	PF00175	Oxidoreductase NAD-binding domain 
NC80_RS00610	PF02699	Preprotein translocase subunit
NC80_RS00615	PF05958	tRNA (Uracil-5-)-methyltransferase
NC80_RS00620	PF07432	Histone H1-like protein Hc1
NC80_RS00630	PF01593	Flavin containing amine oxidoreductase
NC80_RS00635	PF04055	Radical SAM superfamily
NC80_RS00635	PF06969	HemN C-terminal domain
NC80_RS00640	PF01208	Uroporphyrinogen decarboxylase (URO-D)
NC80_RS00645	PF03461	TRCF domain
NC80_RS00645	PF17757	UvrB interaction domain
NC80_RS00645	PF00270	DEAD/DEAH box helicase
NC80_RS00645	PF02559	CarD-like/TRCF domain
NC80_RS00645	PF00271	Helicase conserved C-terminal domain
NC80_RS00650	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
NC80_RS00650	PF01411	tRNA synthetases class II (A)
NC80_RS00650	PF02272	DHHA1 domain
NC80_RS00675	PF02780	Transketolase, C-terminal domain
NC80_RS00675	PF02779	Transketolase, pyrimidine binding domain
NC80_RS00675	PF00456	Transketolase, thiamine diphosphate binding domain
NC80_RS00685	PF09285	Elongation factor P, C-terminal
NC80_RS00685	PF01132	Elongation factor P (EF-P) OB domain
NC80_RS00685	PF08207	Elongation factor P (EF-P) KOW-like domain
NC80_RS00710	PF08245	Mur ligase middle domain
NC80_RS00710	PF02875	Mur ligase family, glutamate ligase domain
NC80_RS00710	PF01225	Mur ligase family, catalytic domain
NC80_RS00715	PF00953	Glycosyl transferase family 4
NC80_RS00720	PF02875	Mur ligase family, glutamate ligase domain
NC80_RS00720	PF08245	Mur ligase middle domain
NC80_RS00730	PF01098	Cell cycle protein
NC80_RS00735	PF04101	Glycosyltransferase family 28 C-terminal domain
NC80_RS00735	PF03033	Glycosyltransferase family 28 N-terminal domain
NC80_RS00740	PF01225	Mur ligase family, catalytic domain
NC80_RS00740	PF02875	Mur ligase family, glutamate ligase domain
NC80_RS00740	PF07478	D-ala D-ala ligase C-terminus
NC80_RS00740	PF01820	D-ala D-ala ligase N-terminus
NC80_RS00740	PF08245	Mur ligase middle domain
NC80_RS00755	PF01740	STAS domain
NC80_RS00765	PF04055	Radical SAM superfamily
NC80_RS00780	PF02801	Beta-ketoacyl synthase, C-terminal domain
NC80_RS00780	PF00109	Beta-ketoacyl synthase, N-terminal domain
NC80_RS00785	PF00293	NUDIX domain
NC80_RS00790	PF00719	Inorganic pyrophosphatase
NC80_RS00795	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
NC80_RS00795	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
NC80_RS00800	PF00459	Inositol monophosphatase family
NC80_RS00810	PF00501	AMP-binding enzyme
NC80_RS00810	PF01553	Acyltransferase
NC80_RS00815	PF00155	Aminotransferase class I and II
NC80_RS00820	PF04851	Type III restriction enzyme, res subunit
NC80_RS00820	PF18074	Primosomal protein N C-terminal domain
NC80_RS00820	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
NC80_RS00820	PF17764	3′ DNA-binding domain (3′BD)
NC80_RS00835	PF00152	tRNA synthetases class II (D, K and N) 
NC80_RS00835	PF01336	OB-fold nucleic acid binding domain
NC80_RS00840	PF09190	DALR domain
NC80_RS00840	PF01406	tRNA synthetases class I (C) catalytic domain
NC80_RS00850	PF00825	Ribonuclease P
NC80_RS00855	PF00444	Ribosomal protein L36
NC80_RS00860	PF00253	Ribosomal protein S14p/S29e
NC80_RS00875	PF01541	GIY-YIG catalytic domain
NC80_RS00875	PF08459	UvrC Helix-hairpin-helix N-terminal
NC80_RS00880	PF01624	MutS domain I
NC80_RS00880	PF00488	MutS domain V
NC80_RS00880	PF05188	MutS domain II
NC80_RS00880	PF05190	MutS family domain IV
NC80_RS00880	PF05192	MutS domain III
NC80_RS00885	PF08275	DNA primase catalytic core, N-terminal domain
NC80_RS00885	PF01807	CHC2 zinc finger
NC80_RS00900	PF02091	Glycyl-tRNA synthetase alpha subunit
NC80_RS00900	PF02092	Glycyl-tRNA synthetase beta subunit
NC80_RS00900	PF05746	DALR anticodon binding domain
NC80_RS00905	PF01066	CDP-alcohol phosphatidyltransferase
NC80_RS00910	PF08323	Starch synthase catalytic domain
NC80_RS00910	PF00534	Glycosyl transferases group 1
NC80_RS00920	PF01386	Ribosomal L25p family
NC80_RS00920	PF14693	Ribosomal protein TL5, C-terminal domain
NC80_RS00925	PF01195	Peptidyl-tRNA hydrolase
NC80_RS00930	PF01250	Ribosomal protein S6
NC80_RS00935	PF01084	Ribosomal protein S18
NC80_RS00940	PF01281	Ribosomal protein L9, N-terminal domain
NC80_RS00940	PF03948	Ribosomal protein L9, C-terminal domain
NC80_RS00945	PF00288	GHMP kinases N terminal domain
NC80_RS00960	PF00675	Insulinase (Peptidase family M16)
NC80_RS00960	PF05193	Peptidase M16 inactive domain
NC80_RS00970	PF00575	S1 RNA binding domain
NC80_RS00970	PF10150	Ribonuclease E/G family
NC80_RS00980	PF02504	Fatty acid synthesis protein
NC80_RS00985	PF03797	Autotransporter beta-domain
NC80_RS00985	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS00985	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01005	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
NC80_RS01005	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NC80_RS01005	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
NC80_RS01005	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
NC80_RS01010	PF01380	SIS domain
NC80_RS01015	PF03222	Tryptophan/tyrosine permease family
NC80_RS01020	PF03222	Tryptophan/tyrosine permease family
NC80_RS01025	PF01027	Inhibitor of apoptosis-promoting Bax1
NC80_RS01030	PF00448	SRP54-type protein, GTPase domain
NC80_RS01035	PF08442	ATP-grasp domain
NC80_RS01035	PF00549	CoA-ligase
NC80_RS01040	PF00549	CoA-ligase
NC80_RS01040	PF02629	CoA binding domain
NC80_RS01045	PF17820	PDZ domain
NC80_RS01045	PF13180	PDZ domain
NC80_RS01050	PF05193	Peptidase M16 inactive domain
NC80_RS01050	PF00675	Insulinase (Peptidase family M16)
NC80_RS01050	PF08367	Peptidase M16C associated
NC80_RS01055	PF02646	RmuC family
NC80_RS01060	PF01066	CDP-alcohol phosphatidyltransferase
NC80_RS01065	PF03477	ATP cone domain
NC80_RS01065	PF02867	Ribonucleotide reductase, barrel domain
NC80_RS01065	PF00317	Ribonucleotide reductase, all-alpha domain
NC80_RS01070	PF00268	Ribonucleotide reductase, small chain
NC80_RS01080	PF06962	Putative rRNA methylase
NC80_RS01085	PF01565	FAD binding domain 
NC80_RS01085	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
NC80_RS01090	PF01029	NusB family
NC80_RS01095	PF00707	Translation initiation factor IF-3, C-terminal domain
NC80_RS01095	PF05198	Translation initiation factor IF-3, N-terminal domain
NC80_RS01100	PF01632	Ribosomal protein L35
NC80_RS01105	PF00453	Ribosomal protein L20
NC80_RS01110	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
NC80_RS01110	PF01409	tRNA synthetases class II core domain (F)
NC80_RS01135	PF01171	PP-loop family
NC80_RS01140	PF17862	AAA+ lid domain
NC80_RS01140	PF00004	ATPase family associated with various cellular activities (AAA)
NC80_RS01140	PF01434	Peptidase family M41
NC80_RS01145	PF00013	KH domain
NC80_RS01145	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
NC80_RS01145	PF03725	3' exoribonuclease family, domain 2
NC80_RS01145	PF00575	S1 RNA binding domain
NC80_RS01145	PF01138	3' exoribonuclease family, domain 1
NC80_RS01150	PF00312	Ribosomal protein S15
NC80_RS01155	PF14437	MafB19-like deaminase
NC80_RS01195	PF02810	SEC-C motif
NC80_RS01195	PF00557	Metallopeptidase family M24
NC80_RS01200	PF01914	MarC family integral membrane protein
NC80_RS01215	PF10415	Fumarase C C-terminus
NC80_RS01215	PF00206	Lyase
NC80_RS01220	PF00916	Sulfate permease family
NC80_RS01220	PF01740	STAS domain
NC80_RS01230	PF03600	Citrate transporter
NC80_RS01235	PF03572	Peptidase family S41
NC80_RS01235	PF17816	PDZ domain
NC80_RS01240	PF02401	LytB protein
NC80_RS01275	PF02899	Phage integrase, N-terminal SAM-like domain
NC80_RS01275	PF00589	Phage integrase family
NC80_RS01285	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NC80_RS01285	PF02806	Alpha amylase, C-terminal all-beta domain
NC80_RS01285	PF00128	Alpha amylase, catalytic domain
NC80_RS01290	PF02902	Ulp1 protease family, C-terminal catalytic domain
NC80_RS01300	PF02902	Ulp1 protease family, C-terminal catalytic domain
NC80_RS01305	PF02902	Ulp1 protease family, C-terminal catalytic domain
NC80_RS01310	PF03797	Autotransporter beta-domain
NC80_RS01310	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01315	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01320	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01320	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS01320	PF03797	Autotransporter beta-domain
NC80_RS01325	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS01325	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01325	PF03797	Autotransporter beta-domain
NC80_RS01335	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS01335	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS01350	PF02686	Glu-tRNAGln amidotransferase C subunit
NC80_RS01355	PF01425	Amidase
NC80_RS01360	PF02637	GatB domain
NC80_RS01360	PF02934	GatB/GatE catalytic domain
NC80_RS01365	PF17461	Family of unknown function (DUF5423)
NC80_RS01370	PF17459	Family of unknown function (DUF5422)
NC80_RS01380	PF11858	Domain of unknown function (DUF3378)
NC80_RS01380	PF01351	Ribonuclease HII
NC80_RS01390	PF03279	Bacterial lipid A biosynthesis acyltransferase
NC80_RS01400	PF02457	DisA bacterial checkpoint controller nucleotide-binding
NC80_RS01405	PF01654	Cytochrome bd terminal oxidase subunit I
NC80_RS01410	PF02322	Cytochrome bd terminal oxidase subunit II
NC80_RS01415	PF13638	PIN domain
NC80_RS01415	PF02562	PhoH-like protein
NC80_RS01435	PF08264	Anticodon-binding domain of tRNA
NC80_RS01435	PF00133	tRNA synthetases class I (I, L, M and V)
NC80_RS01440	PF10502	Signal peptidase, peptidase S26 
NC80_RS01440	PF10502	Signal peptidase, peptidase S26 
NC80_RS01450	PF01197	Ribosomal protein L31
NC80_RS01455	PF03462	PCRF domain
NC80_RS01455	PF00472	RF-1 domain
NC80_RS01460	PF17827	PrmC N-terminal domain
NC80_RS01460	PF05175	Methyltransferase small domain
NC80_RS01465	PF02978	Signal peptide binding domain
NC80_RS01465	PF02881	SRP54-type protein, helical bundle domain
NC80_RS01465	PF00448	SRP54-type protein, GTPase domain
NC80_RS01470	PF00886	Ribosomal protein S16
NC80_RS01475	PF01746	tRNA (Guanine-1)-methyltransferase
NC80_RS01480	PF01245	Ribosomal protein L19
NC80_RS01485	PF01351	Ribonuclease HII
NC80_RS01490	PF00625	Guanylate kinase
NC80_RS01500	PF09334	tRNA synthetases class I (M)
NC80_RS01500	PF08264	Anticodon-binding domain of tRNA
NC80_RS01505	PF13538	UvrD-like helicase C-terminal domain
NC80_RS01505	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
NC80_RS01505	PF14490	Helix-hairpin-helix containing domain
NC80_RS01515	PF09825	Biotin-protein ligase, N terminal
NC80_RS01535	PF00692	dUTPase
NC80_RS01540	PF05496	Holliday junction DNA helicase RuvB P-loop domain
NC80_RS01540	PF05491	RuvB C-terminal winged helix domain
NC80_RS01540	PF17864	RuvB AAA lid domain
NC80_RS01545	PF08486	Stage II sporulation protein
NC80_RS01550	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
NC80_RS01550	PF00128	Alpha amylase, catalytic domain
NC80_RS01560	PF00436	Single-strand binding protein family
NC80_RS01565	PF00883	Cytosol aminopeptidase family, catalytic domain
NC80_RS01565	PF02789	Cytosol aminopeptidase family, N-terminal domain
NC80_RS01570	PF07382	Histone H1-like nucleoprotein HC2
NC80_RS01580	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
NC80_RS01600	PF04055	Radical SAM superfamily
NC80_RS01600	PF06969	HemN C-terminal domain
NC80_RS01610	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NC80_RS01610	PF16078	2-oxoglutarate dehydrogenase N-terminus
NC80_RS01610	PF00676	Dehydrogenase E1 component
NC80_RS01610	PF16870	2-oxoglutarate dehydrogenase C-terminal
NC80_RS01610	PF02779	Transketolase, pyrimidine binding domain
NC80_RS01615	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NC80_RS01615	PF00364	Biotin-requiring enzyme
NC80_RS01615	PF02817	e3 binding domain
NC80_RS01625	PF04551	GcpE protein
NC80_RS01635	PF00111	2Fe-2S iron-sulfur cluster binding domain
NC80_RS01645	PF00771	FHIPEP family
NC80_RS01650	PF04539	Sigma-70 region 3
NC80_RS01650	PF04545	Sigma-70, region 4
NC80_RS01650	PF04542	Sigma-70 region 2 
NC80_RS01655	PF00579	tRNA synthetases class I (W and Y)
NC80_RS01655	PF01479	S4 domain
NC80_RS01660	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
NC80_RS01660	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
NC80_RS01665	PF03144	Elongation factor Tu domain 2
NC80_RS01665	PF06421	GTP-binding protein LepA C-terminus
NC80_RS01665	PF00009	Elongation factor Tu GTP binding domain
NC80_RS01665	PF00679	Elongation factor G C-terminus
NC80_RS01670	PF03219	TLC ATP/ADP transporter
NC80_RS01690	PF01297	Zinc-uptake complex component A periplasmic
NC80_RS01695	PF00005	ABC transporter
NC80_RS01700	PF02742	Iron dependent repressor, metal binding and dimerisation domain
NC80_RS01700	PF00950	ABC 3 transport family
NC80_RS01705	PF00950	ABC 3 transport family
NC80_RS01710	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
NC80_RS01710	PF13288	DXP reductoisomerase C-terminal domain
NC80_RS01710	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
NC80_RS01715	PF02163	Peptidase family M50
NC80_RS01725	PF02463	RecF/RecN/SMC N terminal domain
NC80_RS01730	PF02768	DNA polymerase III beta subunit, C-terminal domain
NC80_RS01730	PF02767	DNA polymerase III beta subunit, central domain
NC80_RS01730	PF00712	DNA polymerase III beta subunit, N-terminal domain
NC80_RS01735	PF01668	SmpB protein
NC80_RS01740	PF02424	ApbE family
NC80_RS01745	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
NC80_RS01745	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
NC80_RS01755	PF17455	Late transcription unit B
NC80_RS01770	PF13091	PLD-like domain
NC80_RS01775	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
NC80_RS01780	PF00830	Ribosomal L28 family
NC80_RS01785	PF02446	4-alpha-glucanotransferase
NC80_RS01800	PF00771	FHIPEP family
NC80_RS01805	PF01312	FlhB HrpN YscU SpaS Family
NC80_RS01810	PF01926	50S ribosome-binding GTPase
NC80_RS01810	PF06071	Protein of unknown function (DUF933)
NC80_RS01815	PF01687	Riboflavin kinase
NC80_RS01815	PF06574	FAD synthetase
NC80_RS01820	PF01509	TruB family pseudouridylate synthase (N terminal domain)
NC80_RS01820	PF16198	tRNA pseudouridylate synthase B C-terminal domain
NC80_RS01825	PF02033	Ribosome-binding factor A
NC80_RS01830	PF11987	Translation-initiation factor 2
NC80_RS01830	PF00009	Elongation factor Tu GTP binding domain
NC80_RS01830	PF04760	Translation initiation factor IF-2, N-terminal region
NC80_RS01835	PF13184	NusA-like KH domain
NC80_RS01835	PF00575	S1 RNA binding domain
NC80_RS01835	PF08529	NusA N-terminal domain
NC80_RS01840	PF00575	S1 RNA binding domain
NC80_RS01845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NC80_RS01850	PF01648	4'-phosphopantetheinyl transferase superfamily
NC80_RS01880	PF01479	S4 domain
NC80_RS01880	PF00849	RNA pseudouridylate synthase
NC80_RS01885	PF14815	NUDIX domain
NC80_RS01885	PF00633	Helix-hairpin-helix motif
NC80_RS01885	PF00730	HhH-GPD superfamily base excision DNA repair protein
NC80_RS01890	PF01784	NIF3 (NGG1p interacting factor 3)
NC80_RS01900	PF00118	TCP-1/cpn60 chaperonin family
NC80_RS01905	PF00166	Chaperonin 10 Kd subunit
NC80_RS01910	PF08439	Oligopeptidase F
NC80_RS01910	PF01432	Peptidase family M3
NC80_RS01915	PF07724	AAA domain (Cdc48 subfamily)
NC80_RS01915	PF00004	ATPase family associated with various cellular activities (AAA)
NC80_RS01915	PF02861	Clp amino terminal domain, pathogenicity island component
NC80_RS01915	PF17871	AAA lid domain
NC80_RS01915	PF10431	C-terminal, D2-small domain, of ClpB protein 
NC80_RS01930	PF17627	Inclusion membrane protein E
NC80_RS01935	PF17626	Inclusion membrane protein F
NC80_RS01955	PF00834	Ribulose-phosphate 3 epimerase family
NC80_RS01960	PF01132	Elongation factor P (EF-P) OB domain
NC80_RS01960	PF08207	Elongation factor P (EF-P) KOW-like domain
NC80_RS01960	PF09285	Elongation factor P, C-terminal
NC80_RS01965	PF00364	Biotin-requiring enzyme
NC80_RS01970	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
NC80_RS01970	PF00289	Biotin carboxylase, N-terminal domain
NC80_RS01970	PF02785	Biotin carboxylase C-terminal domain
NC80_RS01975	PF00572	Ribosomal protein L13
NC80_RS01980	PF00380	Ribosomal protein S9/S16
NC80_RS01995	PF00528	Binding-protein-dependent transport system inner membrane component
NC80_RS02000	PF00005	ABC transporter
NC80_RS02035	PF01300	Telomere recombination
NC80_RS02045	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
NC80_RS02055	PF02810	SEC-C motif
NC80_RS02055	PF03695	Uncharacterised protein family (UPF0149)
NC80_RS02085	PF03781	Sulfatase-modifying factor enzyme 1
NC80_RS02085	PF00069	Protein kinase domain
NC80_RS02090	PF12826	Helix-hairpin-helix motif
NC80_RS02090	PF03120	NAD-dependent DNA ligase OB-fold domain
NC80_RS02090	PF01653	NAD-dependent DNA ligase adenylation domain
NC80_RS02090	PF00533	BRCA1 C Terminus (BRCT) domain
NC80_RS02100	PF01494	FAD binding domain
NC80_RS02115	PF00471	Ribosomal protein L33
NC80_RS02125	PF00005	ABC transporter
NC80_RS02160	PF12920	TcdA/TcdB pore forming domain
NC80_RS02160	PF12919	TcdA/TcdB catalytic glycosyltransferase domain
NC80_RS02160	PF11713	Peptidase C80 family
NC80_RS02160	PF01473	Putative cell wall binding repeat
NC80_RS02160	PF12918	TcdB toxin N-terminal helical domain
NC80_RS02170	PF12919	TcdA/TcdB catalytic glycosyltransferase domain
NC80_RS02170	PF11713	Peptidase C80 family
NC80_RS02170	PF12920	TcdA/TcdB pore forming domain
NC80_RS02170	PF01473	Putative cell wall binding repeat
NC80_RS02170	PF12918	TcdB toxin N-terminal helical domain
NC80_RS02180	PF00962	Adenosine/AMP deaminase
NC80_RS02185	PF00117	Glutamine amidotransferase class-I
NC80_RS02185	PF02540	NAD synthase
NC80_RS02185	PF00958	GMP synthase C terminal domain
NC80_RS02190	PF00571	CBS domain
NC80_RS02190	PF00478	IMP dehydrogenase / GMP reductase domain
NC80_RS02205	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
NC80_RS02215	PF02600	Disulfide bond formation protein DsbB
NC80_RS02235	PF00005	ABC transporter
NC80_RS02255	PF02348	Cytidylyltransferase
NC80_RS02260	PF00117	Glutamine amidotransferase class-I
NC80_RS02260	PF06418	CTP synthase N-terminus
NC80_RS02265	PF03652	Holliday junction resolvase
NC80_RS02270	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
NC80_RS02270	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
NC80_RS02275	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NC80_RS02280	PF12170	DNA polymerase III tau subunit V interacting with alpha
NC80_RS02280	PF12169	DNA polymerase III subunits gamma and tau domain III
NC80_RS02285	PF02223	Thymidylate kinase
NC80_RS02290	PF03989	DNA gyrase C-terminal domain, beta-propeller
NC80_RS02290	PF00521	DNA gyrase/topoisomerase IV, subunit A
NC80_RS02295	PF01751	Toprim domain
NC80_RS02295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NC80_RS02295	PF00986	DNA gyrase B subunit, carboxyl terminus
NC80_RS02295	PF00204	DNA gyrase B
NC80_RS02310	PF01702	Queuine tRNA-ribosyltransferase
NC80_RS02315	PF00571	CBS domain
NC80_RS02315	PF01769	Divalent cation transporter
NC80_RS02315	PF03448	MgtE intracellular N domain
NC80_RS02330	PF00814	Glycoprotease family
NC80_RS02335	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
NC80_RS02340	PF00528	Binding-protein-dependent transport system inner membrane component
NC80_RS02345	PF00528	Binding-protein-dependent transport system inner membrane component
NC80_RS02345	PF12911	N-terminal TM domain of oligopeptide transport permease C
NC80_RS02350	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
NC80_RS02350	PF00005	ABC transporter
NC80_RS02355	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
NC80_RS02355	PF00005	ABC transporter
NC80_RS02360	PF06685	Protein of unknown function (DUF1186)
NC80_RS02365	PF00939	Sodium:sulfate symporter transmembrane region
NC80_RS02370	PF00365	Phosphofructokinase
NC80_RS02380	PF00365	Phosphofructokinase
NC80_RS02395	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
NC80_RS02400	PF13603	Leucyl-tRNA synthetase, Domain 2
NC80_RS02400	PF09334	tRNA synthetases class I (M)
NC80_RS02400	PF08264	Anticodon-binding domain of tRNA
NC80_RS02405	PF00202	Aminotransferase class-III
NC80_RS02410	PF02622	Uncharacterized ACR, COG1678
NC80_RS02420	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
NC80_RS02435	PF01791	DeoC/LacD family aldolase
NC80_RS02440	PF13520	Amino acid permease
NC80_RS02445	PF01171	PP-loop family
NC80_RS02450	PF13361	UvrD-like helicase C-terminal domain
NC80_RS02450	PF00580	UvrD/REP helicase N-terminal domain
NC80_RS02450	PF12462	DNA helicase IV / RNA helicase N terminal
NC80_RS02455	PF01975	Survival protein SurE
NC80_RS02460	PF01040	UbiA prenyltransferase family
NC80_RS02465	PF02441	Flavoprotein
NC80_RS02470	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
NC80_RS02470	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NC80_RS02525	PF00375	Sodium:dicarboxylate symporter family
NC80_RS02530	PF00209	Sodium:neurotransmitter symporter family
NC80_RS02555	PF00550	Phosphopantetheine attachment site
NC80_RS02565	PF00698	Acyl transferase domain
NC80_RS02570	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
NC80_RS02570	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
NC80_RS02575	PF13662	Toprim domain
NC80_RS02580	PF01103	Surface antigen
NC80_RS02580	PF07244	Surface antigen variable number repeat
NC80_RS02585	PF03938	Outer membrane protein (OmpH-like)
NC80_RS02590	PF00132	Bacterial transferase hexapeptide (six repeats)
NC80_RS02590	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
NC80_RS02600	PF00676	Dehydrogenase E1 component
NC80_RS02605	PF02779	Transketolase, pyrimidine binding domain
NC80_RS02605	PF02780	Transketolase, C-terminal domain
NC80_RS02605	PF00364	Biotin-requiring enzyme
NC80_RS02610	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NC80_RS02610	PF00364	Biotin-requiring enzyme
NC80_RS02610	PF02817	e3 binding domain
NC80_RS02615	PF00343	Carbohydrate phosphorylase
NC80_RS02625	PF08299	Bacterial dnaA protein helix-turn-helix
NC80_RS02625	PF00308	Bacterial dnaA  protein
NC80_RS02630	PF02096	60Kd inner membrane protein
NC80_RS02635	PF01790	Prolipoprotein diacylglyceryl transferase
NC80_RS02645	PF02517	CPBP intramembrane metalloprotease
NC80_RS02655	PF03471	Transporter associated domain
NC80_RS02655	PF00571	CBS domain
NC80_RS02655	PF01595	Cyclin M transmembrane N-terminal domain
NC80_RS02665	PF00266	Aminotransferase class-V
NC80_RS02680	PF00929	Exonuclease
NC80_RS02680	PF11490	DNA polymerase III polC-type N-terminus II
NC80_RS02680	PF02811	PHP domain
NC80_RS02680	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NC80_RS02680	PF14579	Helix-hairpin-helix motif
NC80_RS02680	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NC80_RS02685	PF02621	Menaquinone biosynthesis
NC80_RS02695	PF00005	ABC transporter
NC80_RS02695	PF00664	ABC transporter transmembrane region
NC80_RS02700	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
NC80_RS02710	PF00216	Bacterial DNA-binding protein
NC80_RS02715	PF08239	Bacterial SH3 domain
NC80_RS02715	PF01520	N-acetylmuramoyl-L-alanine amidase
NC80_RS02720	PF08245	Mur ligase middle domain
NC80_RS02720	PF02875	Mur ligase family, glutamate ligase domain
NC80_RS02730	PF00905	Penicillin binding protein transpeptidase domain
NC80_RS02730	PF03717	Penicillin-binding Protein dimerisation domain
NC80_RS02740	PF01795	MraW methylase family
NC80_RS02745	PF17377	Family of unknown function (DUF5399)
NC80_RS02755	PF00308	Bacterial dnaA  protein
NC80_RS02755	PF08299	Bacterial dnaA protein helix-turn-helix
NC80_RS02755	PF11638	DnaA N-terminal domain
NC80_RS02770	PF03116	NQR2, RnfD, RnfE family
NC80_RS02775	PF04205	FMN-binding domain
NC80_RS02780	PF02508	Rnf-Nqr subunit, membrane protein
NC80_RS02785	PF02508	Rnf-Nqr subunit, membrane protein
NC80_RS02790	PF01597	Glycine cleavage H-protein
NC80_RS02810	PF10431	C-terminal, D2-small domain, of ClpB protein 
NC80_RS02810	PF07724	AAA domain (Cdc48 subfamily)
NC80_RS02810	PF02861	Clp amino terminal domain, pathogenicity island component
NC80_RS02810	PF17871	AAA lid domain
NC80_RS02810	PF00004	ATPase family associated with various cellular activities (AAA)
NC80_RS02830	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
NC80_RS02835	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
NC80_RS02840	PF00692	dUTPase
NC80_RS02845	PF17848	Acetyl-coA carboxylase zinc finger domain
NC80_RS02845	PF01039	Carboxyl transferase domain
NC80_RS02850	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
NC80_RS02850	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
NC80_RS02855	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
NC80_RS02855	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NC80_RS02855	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
NC80_RS02855	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
NC80_RS02865	PF00035	Double-stranded RNA binding motif
NC80_RS02865	PF14622	Ribonuclease-III-like
NC80_RS02870	PF18073	Rubredoxin metal binding domain
NC80_RS02870	PF05362	Lon protease (S16) C-terminal proteolytic domain
NC80_RS02875	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
NC80_RS02890	PF00069	Protein kinase domain
NC80_RS02895	PF10458	Valyl tRNA synthetase tRNA binding arm
NC80_RS02895	PF00133	tRNA synthetases class I (I, L, M and V)
NC80_RS02895	PF08264	Anticodon-binding domain of tRNA
NC80_RS02915	PF01813	ATP synthase subunit D 
NC80_RS02920	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NC80_RS02920	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NC80_RS02925	PF16886	ATPsynthase alpha/beta subunit N-term extension
NC80_RS02925	PF02874	ATP synthase alpha/beta family, beta-barrel domain
NC80_RS02925	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NC80_RS02930	PF10962	Protein of unknown function (DUF2764)
NC80_RS02935	PF06188	HrpE/YscL/FliH and V-type ATPase subunit E
NC80_RS02950	PF00923	Transaldolase/Fructose-6-phosphate aldolase
NC80_RS02955	PF04997	RNA polymerase Rpb1, domain 1
NC80_RS02955	PF04983	RNA polymerase Rpb1, domain 3
NC80_RS02955	PF00623	RNA polymerase Rpb1, domain 2
NC80_RS02955	PF05000	RNA polymerase Rpb1, domain 4
NC80_RS02955	PF04998	RNA polymerase Rpb1, domain 5
NC80_RS02960	PF04560	RNA polymerase Rpb2, domain 7
NC80_RS02960	PF04563	RNA polymerase beta subunit
NC80_RS02960	PF00562	RNA polymerase Rpb2, domain 6
NC80_RS02960	PF04561	RNA polymerase Rpb2, domain 2
NC80_RS02960	PF04565	RNA polymerase Rpb2, domain 3
NC80_RS02960	PF10385	RNA polymerase beta subunit external 1 domain
NC80_RS02965	PF00542	Ribosomal protein L7/L12 C-terminal domain
NC80_RS02965	PF16320	Ribosomal protein L7/L12 dimerisation domain
NC80_RS02970	PF00466	Ribosomal protein L10
NC80_RS02975	PF00687	Ribosomal protein L1p/L10e family
NC80_RS02980	PF00298	Ribosomal protein L11, RNA binding domain
NC80_RS02980	PF03946	Ribosomal protein L11, N-terminal domain
NC80_RS02985	PF02357	Transcription termination factor nusG
NC80_RS03000	PF03144	Elongation factor Tu domain 2
NC80_RS03000	PF00009	Elongation factor Tu GTP binding domain
NC80_RS03000	PF03143	Elongation factor Tu C-terminal domain
NC80_RS03010	PF01176	Translation initiation factor 1A / IF-1
NC80_RS03040	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
NC80_RS03045	PF00121	Triosephosphate isomerase
NC80_RS03050	PF02601	Exonuclease VII, large subunit
NC80_RS03050	PF13742	OB-fold nucleic acid binding domain
NC80_RS03055	PF02609	Exonuclease VII small subunit
NC80_RS03065	PF02779	Transketolase, pyrimidine binding domain
NC80_RS03065	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
NC80_RS03065	PF02780	Transketolase, C-terminal domain
NC80_RS03070	PF00224	Pyruvate kinase, barrel domain
NC80_RS03070	PF02887	Pyruvate kinase, alpha/beta domain
NC80_RS03075	PF17755	UvrA DNA-binding domain
NC80_RS03075	PF17760	UvrA interaction domain
NC80_RS03080	PF12169	DNA polymerase III subunits gamma and tau domain III
NC80_RS03085	PF02575	YbaB/EbfC DNA-binding family
NC80_RS03090	PF00391	PEP-utilising enzyme, mobile domain
NC80_RS03090	PF02896	PEP-utilising enzyme, TIM barrel domain
NC80_RS03090	PF05524	PEP-utilising enzyme, N-terminal
NC80_RS03095	PF00381	PTS HPr component phosphorylation site
NC80_RS03115	PF02779	Transketolase, pyrimidine binding domain
NC80_RS03115	PF02780	Transketolase, C-terminal domain
NC80_RS03120	PF00684	DnaJ central domain
NC80_RS03120	PF01556	DnaJ C terminal domain
NC80_RS03120	PF00226	DnaJ domain
NC80_RS03125	PF01165	Ribosomal protein S21
NC80_RS03130	PF00814	Glycoprotease family
NC80_RS03135	PF05362	Lon protease (S16) C-terminal proteolytic domain
NC80_RS03135	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
NC80_RS03135	PF00004	ATPase family associated with various cellular activities (AAA)
NC80_RS03145	PF00753	Metallo-beta-lactamase superfamily
NC80_RS03150	PF13495	Phage integrase, N-terminal SAM-like domain
NC80_RS03150	PF00589	Phage integrase family
NC80_RS03155	PF00005	ABC transporter
NC80_RS03155	PF12848	ABC transporter
NC80_RS03160	PF02545	Maf-like protein
NC80_RS03180	PF01327	Polypeptide deformylase
NC80_RS03185	PF00398	Ribosomal RNA adenine dimethylase
NC80_RS03195	PF03190	Protein of unknown function, DUF255
NC80_RS03225	PF00701	Dihydrodipicolinate synthetase family
NC80_RS03230	PF00696	Amino acid kinase family
NC80_RS03235	PF02774	Semialdehyde dehydrogenase, dimerisation domain
NC80_RS03235	PF01118	Semialdehyde dehydrogenase, NAD binding domain
NC80_RS03240	PF01113	Dihydrodipicolinate reductase, N-terminus
NC80_RS03240	PF05173	Dihydrodipicolinate reductase, C-terminus
NC80_RS03250	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
NC80_RS03255	PF01202	Shikimate kinase
NC80_RS03260	PF01264	Chorismate synthase
NC80_RS03265	PF01761	3-dehydroquinate synthase
NC80_RS03270	PF01488	Shikimate / quinate 5-dehydrogenase
NC80_RS03270	PF01487	Type I 3-dehydroquinase
NC80_RS03270	PF08501	Shikimate dehydrogenase substrate binding domain
NC80_RS03275	PF11019	Protein of unknown function (DUF2608)
NC80_RS03280	PF04966	Carbohydrate-selective porin, OprB family
NC80_RS03285	PF01862	Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
NC80_RS03290	PF13520	Amino acid permease
NC80_RS03295	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
NC80_RS03295	PF01266	FAD dependent oxidoreductase
NC80_RS03300	PF00056	lactate/malate dehydrogenase, NAD binding domain
NC80_RS03300	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
NC80_RS03305	PF00342	Phosphoglucose isomerase
NC80_RS03310	PF16360	GTP-binding GTPase Middle Region
NC80_RS03310	PF01926	50S ribosome-binding GTPase
NC80_RS03310	PF13167	GTP-binding GTPase N-terminal
NC80_RS03315	PF03099	Biotin/lipoate A/B protein ligase family
NC80_RS03315	PF12706	Beta-lactamase superfamily domain
NC80_RS03320	PF00497	Bacterial extracellular solute-binding proteins, family 3
NC80_RS03325	PF00793	DAHP synthetase I family
NC80_RS03325	PF01817	Chorismate mutase type II
NC80_RS03345	PF01230	HIT domain
NC80_RS03350	PF03690	Uncharacterised protein family (UPF0160)
NC80_RS03365	PF02594	Uncharacterised ACR, YggU family COG1872
NC80_RS03375	PF00155	Aminotransferase class I and II
NC80_RS03390	PF03129	Anticodon binding domain
NC80_RS03390	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NC80_RS03390	PF04073	Aminoacyl-tRNA editing domain
NC80_RS03395	PF01628	HrcA protein C terminal domain
NC80_RS03400	PF01025	GrpE
NC80_RS03405	PF00012	Hsp70 protein
NC80_RS03410	PF00773	RNB domain
NC80_RS03410	PF08206	Ribonuclease B OB domain
NC80_RS03420	PF00571	CBS domain
NC80_RS03420	PF01380	SIS domain
NC80_RS03425	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
NC80_RS03425	PF00364	Biotin-requiring enzyme
NC80_RS03425	PF02817	e3 binding domain
NC80_RS03430	PF00375	Sodium:dicarboxylate symporter family
NC80_RS03435	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
NC80_RS03440	PF08032	RNA 2'-O ribose methyltransferase substrate binding
NC80_RS03440	PF00588	SpoU rRNA Methylase family
NC80_RS03445	PF10672	S-adenosylmethionine-dependent methyltransferase
NC80_RS03445	PF17785	PUA-like domain
NC80_RS03450	PF00677	Lumazine binding domain
NC80_RS03455	PF03477	ATP cone domain
NC80_RS03460	PF01258	Prokaryotic dksA/traR C4-type zinc finger
NC80_RS03465	PF01252	Signal peptidase (SPase) II
NC80_RS03470	PF01235	Sodium:alanine symporter family
NC80_RS03475	PF12626	Polymerase A arginine-rich C-terminus
NC80_RS03475	PF01743	Poly A polymerase head domain
NC80_RS03475	PF12627	Probable RNA and SrmB- binding site of polymerase A
NC80_RS03480	PF07578	Lipid A Biosynthesis N-terminal domain
NC80_RS03480	PF02684	Lipid-A-disaccharide synthetase
NC80_RS03485	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS03485	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS03490	PF02415	Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
NC80_RS03490	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS03490	PF03797	Autotransporter beta-domain
NC80_RS03495	PF07548	Chlamydia polymorphic membrane protein middle domain
NC80_RS03495	PF03797	Autotransporter beta-domain
NC80_RS03505	PF01297	Zinc-uptake complex component A periplasmic
NC80_RS03510	PF00005	ABC transporter
NC80_RS03515	PF00950	ABC 3 transport family
NC80_RS03520	PF01926	50S ribosome-binding GTPase
NC80_RS03520	PF01018	GTP1/OBG
NC80_RS03525	PF01016	Ribosomal L27 protein
NC80_RS03530	PF00829	Ribosomal prokaryotic L21 protein
NC80_RS03545	PF02130	Uncharacterized protein family UPF0054
NC80_RS03550	PF03471	Transporter associated domain
NC80_RS03550	PF00571	CBS domain
NC80_RS03555	PF01740	STAS domain
NC80_RS03560	PF12228	Protein of unknown function (DUF3604)
NC80_RS03565	PF04055	Radical SAM superfamily
NC80_RS03575	PF01209	ubiE/COQ5 methyltransferase family
NC80_RS03580	PF03682	Uncharacterised protein family (UPF0158)
NC80_RS03585	PF01678	Diaminopimelate epimerase
NC80_RS03590	PF00574	Clp protease
NC80_RS03595	PF00464	Serine hydroxymethyltransferase
NC80_RS03605	PF02542	YgbB family
NC80_RS03610	PF00175	Oxidoreductase NAD-binding domain 
NC80_RS03610	PF00258	Flavodoxin
NC80_RS03610	PF00667	FAD binding domain
NC80_RS03615	PF00338	Ribosomal protein S10p/S20e
NC80_RS03620	PF03144	Elongation factor Tu domain 2
NC80_RS03620	PF14492	Elongation Factor G, domain II
NC80_RS03620	PF00679	Elongation factor G C-terminus
NC80_RS03620	PF03764	Elongation factor G, domain IV
NC80_RS03620	PF00009	Elongation factor Tu GTP binding domain
NC80_RS03625	PF00177	Ribosomal protein S7p/S5e
NC80_RS03630	PF00164	Ribosomal protein S12/S23
NC80_RS03640	PF11818	C-terminal domain of tail specific protease (DUF3340)
NC80_RS03640	PF03572	Peptidase family S41
NC80_RS03640	PF17804	Tail specific protease N-terminal domain
NC80_RS03640	PF00595	PDZ domain
NC80_RS03645	PF05745	Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
NC80_RS03650	PF03504	Chlamydia cysteine-rich outer membrane protein 6
NC80_RS03650	PF01345	Domain of unknown function DUF11
NC80_RS03655	PF03503	Chlamydia cysteine-rich outer membrane protein 3
NC80_RS03665	PF00749	tRNA synthetases class I (E and Q), catalytic domain
NC80_RS03670	PF12728	Helix-turn-helix domain
NC80_RS03675	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
NC80_RS03675	PF17768	RecJ OB domain
NC80_RS03675	PF02272	DHHA1 domain
NC80_RS03675	PF01368	DHH family
NC80_RS03680	PF07549	SecD/SecF GG Motif
NC80_RS03680	PF02355	Protein export membrane protein
NC80_RS03690	PF01255	Putative undecaprenyl diphosphate synthase
NC80_RS03700	PF02224	Cytidylate kinase
NC80_RS03705	PF00501	AMP-binding enzyme
NC80_RS03705	PF01553	Acyltransferase
NC80_RS03710	PF00750	tRNA synthetases class I (R)
NC80_RS03710	PF03485	Arginyl tRNA synthetase N terminal domain
NC80_RS03710	PF05746	DALR anticodon binding domain
NC80_RS03715	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
NC80_RS03720	PF07577	Domain of Unknown Function (DUF1547)
NC80_RS03725	PF01709	Transcriptional regulator
NC80_RS03730	PF00583	Acetyltransferase (GNAT) family
NC80_RS03735	PF00472	RF-1 domain
NC80_RS03735	PF03462	PCRF domain
NC80_RS03745	PF00149	Calcineurin-like phosphoesterase
NC80_RS03750	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
NC80_RS03755	PF01416	tRNA pseudouridine synthase
NC80_RS03760	PF13419	Haloacid dehalogenase-like hydrolase
NC80_RS03780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NC80_RS03780	PF00512	His Kinase A (phospho-acceptor) domain
NC80_RS03785	PF00072	Response regulator receiver domain
NC80_RS03785	PF00158	Sigma-54 interaction domain
NC80_RS03785	PF02954	Bacterial regulatory protein, Fis family
NC80_RS03800	PF02565	Recombination protein O C terminal
NC80_RS03825	PF01809	Putative membrane protein insertion efficiency factor
NC80_RS03835	PF03147	Ferredoxin-fold anticodon binding domain
NC80_RS03835	PF01588	Putative tRNA binding domain
NC80_RS03835	PF03484	tRNA synthetase B5 domain
NC80_RS03835	PF03483	B3/4 domain
NC80_RS03835	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
NC80_RS03850	PF12911	N-terminal TM domain of oligopeptide transport permease C
NC80_RS03850	PF00528	Binding-protein-dependent transport system inner membrane component
NC80_RS03855	PF00528	Binding-protein-dependent transport system inner membrane component
NC80_RS03885	PF00762	Ferrochelatase
NC80_RS03905	PF00483	Nucleotidyl transferase
NC80_RS03915	PF07498	Rho termination factor, N-terminal domain
NC80_RS03915	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
NC80_RS03915	PF07497	Rho termination factor, RNA-binding domain
NC80_RS03920	PF01121	Dephospho-CoA kinase
NC80_RS03925	PF01367	5'-3' exonuclease, C-terminal SAM fold
NC80_RS03925	PF00476	DNA polymerase family A
NC80_RS03925	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
NC80_RS03930	PF01343	Peptidase family S49
NC80_RS03935	PF03219	TLC ATP/ADP transporter
NC80_RS03940	PF01066	CDP-alcohol phosphatidyltransferase
NC80_RS03955	PF00772	DnaB-like helicase N terminal domain
NC80_RS03955	PF03796	DnaB-like helicase C terminal domain
NC80_RS03960	PF01134	Glucose inhibited division protein A
NC80_RS03960	PF13932	GidA associated domain
NC80_RS03965	PF10437	Bacterial lipoate protein ligase C-terminus
NC80_RS03965	PF03099	Biotin/lipoate A/B protein ligase family
NC80_RS03970	PF00334	Nucleoside diphosphate kinase
NC80_RS03975	PF01330	RuvA N terminal domain
NC80_RS03980	PF02075	Crossover junction endodeoxyribonuclease RuvC
NC80_RS04000	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NC80_RS04000	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
NC80_RS04005	PF01196	Ribosomal protein L17
NC80_RS04010	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
NC80_RS04010	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
NC80_RS04010	PF01000	RNA polymerase Rpb3/RpoA insert domain
NC80_RS04015	PF00411	Ribosomal protein S11
NC80_RS04020	PF00416	Ribosomal protein S13/S18
NC80_RS04025	PF00344	SecY translocase
NC80_RS04030	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
NC80_RS04035	PF00333	Ribosomal protein S5, N-terminal domain
NC80_RS04035	PF03719	Ribosomal protein S5, C-terminal domain
NC80_RS04040	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
NC80_RS04045	PF00347	Ribosomal protein L6
NC80_RS04050	PF00410	Ribosomal protein S8
NC80_RS04055	PF00281	Ribosomal protein L5
NC80_RS04055	PF00673	ribosomal L5P family C-terminus
NC80_RS04060	PF00467	KOW motif
NC80_RS04060	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
NC80_RS04065	PF00238	Ribosomal protein L14p/L23e
NC80_RS04070	PF00366	Ribosomal protein S17
NC80_RS04075	PF00831	Ribosomal L29 protein
NC80_RS04080	PF00252	Ribosomal protein L16p/L10e
NC80_RS04085	PF07650	KH domain
NC80_RS04085	PF00189	Ribosomal protein S3, C-terminal domain
NC80_RS04090	PF00237	Ribosomal protein L22p/L17e
NC80_RS04095	PF00203	Ribosomal protein S19
NC80_RS04100	PF00181	Ribosomal Proteins L2, RNA binding domain
NC80_RS04100	PF03947	Ribosomal Proteins L2, C-terminal domain
NC80_RS04105	PF00276	Ribosomal protein L23
NC80_RS04110	PF00573	Ribosomal protein L4/L1 family
NC80_RS04115	PF00297	Ribosomal protein L3
NC80_RS04125	PF02911	Formyl transferase, C-terminal domain
NC80_RS04125	PF00551	Formyl transferase
NC80_RS04130	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
NC80_RS04130	PF00132	Bacterial transferase hexapeptide (six repeats)
NC80_RS04135	PF07977	FabA-like domain
NC80_RS04140	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
NC80_RS04145	PF00795	Carbon-nitrogen hydrolase
NC80_RS04150	PF03061	Thioesterase superfamily
NC80_RS04155	PF00929	Exonuclease
NC80_RS04165	PF10915	Protein of unknown function (DUF2709)
NC80_RS04175	PF00085	Thioredoxin
NC80_RS04180	PF00588	SpoU rRNA Methylase family
NC80_RS04185	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
NC80_RS04185	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
NC80_RS04190	PF01336	OB-fold nucleic acid binding domain
NC80_RS04190	PF00152	tRNA synthetases class II (D, K and N) 
NC80_RS04190	PF02938	GAD domain
NC80_RS04195	PF13393	Histidyl-tRNA synthetase
NC80_RS04195	PF03129	Anticodon binding domain
NC80_RS04200	PF07690	Major Facilitator Superfamily
NC80_RS04205	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
NC80_RS04205	PF14579	Helix-hairpin-helix motif
NC80_RS04205	PF07733	Bacterial DNA polymerase III alpha NTPase domain
NC80_RS04205	PF02811	PHP domain
NC80_RS04240	PF07943	Penicillin-binding protein 5, C-terminal domain
NC80_RS04240	PF00768	D-alanyl-D-alanine carboxypeptidase
NC80_RS04250	PF01029	NusB family
NC80_RS04250	PF01189	16S rRNA methyltransferase RsmB/F
NC80_RS04255	PF05525	Branched-chain amino acid transport protein
NC80_RS04260	PF00271	Helicase conserved C-terminal domain
NC80_RS04260	PF04434	SWIM zinc finger
NC80_RS04260	PF00176	SNF2 family N-terminal domain
NC80_RS04270	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
NC80_RS04270	PF07992	Pyridine nucleotide-disulphide oxidoreductase
NC80_RS04275	PF04055	Radical SAM superfamily
NC80_RS04275	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
NC80_RS04280	PF01514	Secretory protein of YscJ/FliF family
NC80_RS04290	PF02108	Flagellar assembly protein FliH
NC80_RS04295	PF00813	FliP family
NC80_RS04300	PF01313	Bacterial export proteins, family 3
NC80_RS04305	PF01311	Bacterial export proteins, family 1
NC80_RS04330	PF07963	Prokaryotic N-terminal methylation motif
NC80_RS04335	PF00482	Type II secretion system (T2SS), protein F
NC80_RS04340	PF00437	Type II/IV secretion system protein
NC80_RS04345	PF07660	Secretin and TonB N terminus short domain
NC80_RS04345	PF03958	Bacterial type II/III secretion system short domain
NC80_RS04345	PF00263	Bacterial type II and III secretion system protein
NC80_RS04345	PF11741	AMIN domain
NC80_RS04355	PF01321	Creatinase/Prolidase N-terminal domain
NC80_RS04355	PF00557	Metallopeptidase family M24
NC80_RS04360	PF08676	MutL C terminal dimerisation domain
NC80_RS04360	PF01119	DNA mismatch repair protein, C-terminal domain
NC80_RS04380	PF04888	Secretion system effector C (SseC) like family 
NC80_RS04385	PF00892	EamA-like transporter family
NC80_RS04390	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
NC80_RS04390	PF02824	TGS domain
NC80_RS04390	PF03129	Anticodon binding domain
NC80_RS04390	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
NC80_RS04395	PF13614	AAA domain
NC80_RS04400	PF03677	Uncharacterised protein family (UPF0137)
NC80_RS04405	PF17435	Family of unknown function (DUF5414)
NC80_RS04410	PF00579	tRNA synthetases class I (W and Y)
NC80_RS04415	PF00271	Helicase conserved C-terminal domain
NC80_RS04415	PF02151	UvrB/uvrC motif
NC80_RS04415	PF04851	Type III restriction enzyme, res subunit
NC80_RS04415	PF12344	Ultra-violet resistance protein B
NC80_RS04415	PF17757	UvrB interaction domain
NC80_RS04420	PF00113	Enolase, C-terminal TIM barrel domain
NC80_RS04420	PF03952	Enolase, N-terminal domain
NC80_RS04440	PF13183	4Fe-4S dicluster domain
NC80_RS04440	PF13085	2Fe-2S iron-sulfur cluster binding domain
NC80_RS04445	PF02910	Fumarate reductase flavoprotein C-term
NC80_RS04445	PF00890	FAD binding domain
NC80_RS04455	PF01026	TatD related DNase
NC80_RS04460	PF02683	Cytochrome C biogenesis protein transmembrane region
NC80_RS04460	PF11412	Disulphide bond corrector protein DsbC
NC80_RS04465	PF01618	MotA/TolQ/ExbB proton channel family
NC80_RS04470	PF02472	Biopolymer transport protein ExbD/TolR
NC80_RS04480	PF07676	WD40-like Beta Propeller Repeat
NC80_RS04485	PF00691	OmpA family
NC80_RS04490	PF01476	LysM domain
NC80_RS04500	PF00578	AhpC/TSA family
NC80_RS04500	PF10417	C-terminal domain of 1-Cys peroxiredoxin
NC80_RS04510	PF00118	TCP-1/cpn60 chaperonin family
NC80_RS04515	PF07075	Protein of unknown function (DUF1343)
NC80_RS04520	PF01725	Ham1 family
NC80_RS04530	PF03167	Uracil DNA glycosylase superfamily
NC80_RS04535	PF00580	UvrD/REP helicase N-terminal domain
NC80_RS04535	PF13361	UvrD-like helicase C-terminal domain
NC80_RS04540	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
NC80_RS04540	PF04963	Sigma-54 factor, core binding domain
NC80_RS04540	PF04552	Sigma-54, DNA binding domain
NC80_RS04545	PF03070	TENA/THI-4/PQQC family
NC80_RS04550	PF01996	F420-0:Gamma-glutamyl ligase
NC80_RS04550	PF00881	Nitroreductase family
NC80_RS04555	PF00186	Dihydrofolate reductase
NC80_RS04560	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NC80_RS04560	PF00809	Pterin binding enzyme
NC80_RS04565	PF02152	Dihydroneopterin aldolase
NC80_RS04570	PF04545	Sigma-70, region 4
NC80_RS04570	PF04539	Sigma-70 region 3
NC80_RS04570	PF04542	Sigma-70 region 2 
NC80_RS04570	PF00140	Sigma-70 factor, region 1.2
NC80_RS04570	PF03979	Sigma-70 factor, region 1.1
NC80_RS04575	PF18095	UPF0242 C-terminal PAS-like domain
NC80_RS04575	PF06785	Uncharacterised protein family (UPF0242) N-terminus
NC80_RS04585	PF01649	Ribosomal protein S20
NC80_RS04620	PF03023	Lipid II flippase MurJ
NC80_RS04625	PF01261	Xylose isomerase-like TIM barrel
NC80_RS04630	PF00163	Ribosomal protein S4/S9 N-terminal domain
NC80_RS04630	PF01479	S4 domain
NC80_RS04635	PF17773	UPF0176 acylphosphatase like domain
NC80_RS04635	PF00581	Rhodanese-like domain
NC80_RS04635	PF12368	Rhodanase C-terminal
NC80_RS04640	PF00348	Polyprenyl synthetase
NC80_RS04645	PF12804	MobA-like NTP transferase domain
NC80_RS04645	PF14602	Hexapeptide repeat of succinyl-transferase
NC80_RS04645	PF00132	Bacterial transferase hexapeptide (six repeats)
NC80_RS04650	PF00486	Transcriptional regulatory protein, C terminal
NC80_RS04665	PF02511	Thymidylate synthase complementing protein
