DNC_RS00005 PF00490 Delta-aminolevulinic acid dehydratase DNC_RS00010 PF05896 DNC_RS00010 DNC_RS00010 PF11973 DNC_RS00010 DNC_RS00020 PF01272 Transcription elongation factor, GreA/GreB, C-term DNC_RS00020 PF03449 Transcription elongation factor, N-terminal DNC_RS00030 PF00155 Aminotransferase class I and II DNC_RS00035 PF04085 rod shape-determining protein MreC DNC_RS00040 PF00580 UvrD/REP helicase N-terminal domain DNC_RS00040 PF13361 UvrD-like helicase C-terminal domain DNC_RS00045 PF04257 Exodeoxyribonuclease V, gamma subunit DNC_RS00050 PF07690 Major Facilitator Superfamily DNC_RS00065 PF01131 DNA topoisomerase DNC_RS00065 PF01396 DNC_RS00065 DNC_RS00065 PF01751 Toprim domain DNC_RS00065 PF02201 SWIB/MDM2 domain DNC_RS00070 PF01207 Dihydrouridine synthase (Dus) DNC_RS00075 PF02325 DNC_RS00075 DNC_RS00090 PF07661 DNC_RS00090 DNC_RS00095 PF01812 5-formyltetrahydrofolate cyclo-ligase family DNC_RS00100 PF00154 recA bacterial DNA recombination protein DNC_RS00105 PF07079 DNC_RS00105 DNC_RS00110 PF13538 UvrD-like helicase C-terminal domain DNC_RS00110 PF13604 AAA domain DNC_RS00120 PF00005 ABC transporter DNC_RS00125 PF06587 DNC_RS00125 DNC_RS00130 PF00793 DAHP synthetase I family DNC_RS00150 PF00849 RNA pseudouridylate synthase DNC_RS00150 PF01479 S4 domain DNC_RS00155 PF13083 KH domain DNC_RS00160 PF00521 DNA gyrase/topoisomerase IV, subunit A DNC_RS00165 PF00204 DNA gyrase B DNC_RS00165 PF00986 DNA gyrase B subunit, carboxyl terminus DNC_RS00165 PF01751 Toprim domain DNC_RS00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNC_RS00170 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DNC_RS00175 PF05932 Tir chaperone protein (CesT) family DNC_RS00180 PF04972 BON domain DNC_RS00180 PF16697 DNC_RS00180 DNC_RS00205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNC_RS00205 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNC_RS00210 PF16789 DNC_RS00210 DNC_RS00220 PF01052 Surface presentation of antigens (SPOA) DNC_RS00225 PF00069 Protein kinase domain DNC_RS00230 PF00263 DNC_RS00230 DNC_RS00230 PF03958 Bacterial type II/III secretion system short domain DNC_RS00240 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DNC_RS00245 PF02151 UvrB/uvrC motif DNC_RS00260 PF01765 Ribosome recycling factor DNC_RS00265 PF00696 Amino acid kinase family DNC_RS00270 PF00889 Elongation factor TS DNC_RS00275 PF00318 Ribosomal protein S2 DNC_RS00285 PF01308 DNC_RS00285 DNC_RS00290 PF00905 Penicillin binding protein transpeptidase domain DNC_RS00290 PF03717 Penicillin-binding Protein dimerisation domain DNC_RS00295 PF00515 Tetratricopeptide repeat DNC_RS00295 PF13181 Tetratricopeptide repeat DNC_RS00295 PF13432 Tetratricopeptide repeat DNC_RS00300 PF01458 Uncharacterized protein family (UPF0051) DNC_RS00305 PF00005 ABC transporter DNC_RS00310 PF01458 Uncharacterized protein family (UPF0051) DNC_RS00315 PF00266 Aminotransferase class-V DNC_RS00320 PF02195 ParB-like nuclease domain DNC_RS00325 PF00005 ABC transporter DNC_RS00325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNC_RS00330 PF00005 ABC transporter DNC_RS00330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNC_RS00335 PF01865 Protein of unknown function DUF47 DNC_RS00340 PF01384 DNC_RS00340 DNC_RS00345 PF00162 Phosphoglycerate kinase DNC_RS00365 PF00633 Helix-hairpin-helix motif DNC_RS00365 PF00730 HhH-GPD superfamily base excision DNA repair protein DNC_RS00370 PF01926 50S ribosome-binding GTPase DNC_RS00370 PF10396 GTP-binding protein TrmE N-terminus DNC_RS00370 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE DNC_RS00380 PF02666 DNC_RS00380 DNC_RS00390 PF01043 SecA preprotein cross-linking domain DNC_RS00390 PF07516 SecA Wing and Scaffold domain DNC_RS00390 PF07517 SecA DEAD-like domain DNC_RS00400 PF01926 50S ribosome-binding GTPase DNC_RS00400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DNC_RS00405 PF01743 Poly A polymerase head domain DNC_RS00405 PF12627 Probable RNA and SrmB- binding site of polymerase A DNC_RS00410 PF06689 ClpX C4-type zinc finger DNC_RS00410 PF07724 AAA domain (Cdc48 subfamily) DNC_RS00410 PF10431 C-terminal, D2-small domain, of ClpB protein DNC_RS00415 PF00574 Clp protease DNC_RS00420 PF05697 Bacterial trigger factor protein (TF) DNC_RS00420 PF05698 Bacterial trigger factor protein (TF) C-terminus DNC_RS00430 PF00176 SNF2 family N-terminal domain DNC_RS00430 PF00271 Helicase conserved C-terminal domain DNC_RS00430 PF08455 DNC_RS00430 DNC_RS00435 PF06723 MreB/Mbl protein DNC_RS00440 PF00821 Phosphoenolpyruvate carboxykinase DNC_RS00445 PF04518 DNC_RS00445 DNC_RS00450 PF04518 DNC_RS00450 DNC_RS00455 PF01308 DNC_RS00455 DNC_RS00460 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DNC_RS00460 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DNC_RS00465 PF01704 UTP--glucose-1-phosphate uridylyltransferase DNC_RS00475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNC_RS00475 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNC_RS00485 PF01514 Secretory protein of YscJ/FliF family DNC_RS00485 PF14841 FliG middle domain DNC_RS00490 PF01106 NifU-like domain DNC_RS00490 PF01592 NifU-like N terminal domain DNC_RS00495 PF00266 Aminotransferase class-V DNC_RS00500 PF00300 Histidine phosphatase superfamily (branch 1) DNC_RS00505 PF00849 RNA pseudouridylate synthase DNC_RS00505 PF01479 S4 domain DNC_RS00515 PF03099 Biotin/lipoate A/B protein ligase family DNC_RS00520 PF01098 DNC_RS00520 DNC_RS00525 PF00122 E1-E2 ATPase DNC_RS00525 PF00702 haloacid dehalogenase-like hydrolase DNC_RS00530 PF01988 DNC_RS00530 DNC_RS00535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNC_RS00535 PF02403 Seryl-tRNA synthetase N-terminal domain DNC_RS00540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNC_RS00540 PF01872 RibD C-terminal domain DNC_RS00545 PF00925 GTP cyclohydrolase II DNC_RS00545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DNC_RS00550 PF00885 6,7-dimethyl-8-ribityllumazine synthase DNC_RS00565 PF01235 DNC_RS00565 DNC_RS00570 PF01161 Phosphatidylethanolamine-binding protein DNC_RS00575 PF00856 SET domain DNC_RS00580 PF12706 Beta-lactamase superfamily domain DNC_RS00585 PF01580 FtsK/SpoIIIE family DNC_RS00585 PF09397 Ftsk gamma domain DNC_RS00585 PF13491 DNC_RS00585 DNC_RS00620 PF00111 2Fe-2S iron-sulfur cluster binding domain DNC_RS00620 PF00175 Oxidoreductase NAD-binding domain DNC_RS00625 PF02699 Preprotein translocase subunit DNC_RS00630 PF05958 tRNA (Uracil-5-)-methyltransferase DNC_RS00635 PF07432 DNC_RS00635 DNC_RS00645 PF01593 Flavin containing amine oxidoreductase DNC_RS00650 PF04055 Radical SAM superfamily DNC_RS00650 PF06969 HemN C-terminal domain DNC_RS00655 PF01208 Uroporphyrinogen decarboxylase (URO-D) DNC_RS00660 PF00270 DEAD/DEAH box helicase DNC_RS00660 PF00271 Helicase conserved C-terminal domain DNC_RS00660 PF02559 CarD-like/TRCF domain DNC_RS00660 PF03461 TRCF domain DNC_RS00665 PF01411 tRNA synthetases class II (A) DNC_RS00665 PF02272 DHHA1 domain DNC_RS00665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNC_RS00690 PF00456 Transketolase, thiamine diphosphate binding domain DNC_RS00690 PF02779 Transketolase, pyrimidine binding domain DNC_RS00695 PF01048 Phosphorylase superfamily DNC_RS00700 PF01132 Elongation factor P (EF-P) OB domain DNC_RS00700 PF08207 Elongation factor P (EF-P) KOW-like domain DNC_RS00700 PF09285 Elongation factor P, C-terminal DNC_RS00710 PF00149 Calcineurin-like phosphoesterase DNC_RS00715 PF00118 TCP-1/cpn60 chaperonin family DNC_RS00725 PF01225 Mur ligase family, catalytic domain DNC_RS00725 PF02875 Mur ligase family, glutamate ligase domain DNC_RS00725 PF08245 Mur ligase middle domain DNC_RS00730 PF00953 Glycosyl transferase family 4 DNC_RS00735 PF02875 Mur ligase family, glutamate ligase domain DNC_RS00735 PF08245 Mur ligase middle domain DNC_RS00740 PF01476 LysM domain DNC_RS00745 PF01098 DNC_RS00745 DNC_RS00750 PF03033 Glycosyltransferase family 28 N-terminal domain DNC_RS00750 PF04101 Glycosyltransferase family 28 C-terminal domain DNC_RS00755 PF01225 Mur ligase family, catalytic domain DNC_RS00755 PF01820 D-ala D-ala ligase N-terminus DNC_RS00755 PF02875 Mur ligase family, glutamate ligase domain DNC_RS00755 PF07478 D-ala D-ala ligase C-terminus DNC_RS00755 PF08245 Mur ligase middle domain DNC_RS00760 PF13083 KH domain DNC_RS00770 PF01740 STAS domain DNC_RS00775 PF01715 IPP transferase DNC_RS00780 PF04055 Radical SAM superfamily DNC_RS00790 PF02410 Oligomerisation domain DNC_RS00795 PF00109 Beta-ketoacyl synthase, N-terminal domain DNC_RS00795 PF02801 Beta-ketoacyl synthase, C-terminal domain DNC_RS00800 PF00293 NUDIX domain DNC_RS00805 PF00719 Inorganic pyrophosphatase DNC_RS00810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNC_RS00810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNC_RS00815 PF00459 Inositol monophosphatase family DNC_RS00820 PF01553 Acyltransferase DNC_RS00825 PF00501 AMP-binding enzyme DNC_RS00830 PF00155 Aminotransferase class I and II DNC_RS00835 PF00271 Helicase conserved C-terminal domain DNC_RS00835 PF04851 Type III restriction enzyme, res subunit DNC_RS00845 PF13899 Thioredoxin-like DNC_RS00850 PF00152 tRNA synthetases class II (D, K and N) DNC_RS00850 PF01336 OB-fold nucleic acid binding domain DNC_RS00855 PF01406 tRNA synthetases class I (C) catalytic domain DNC_RS00855 PF09190 DALR domain DNC_RS00860 PF13899 Thioredoxin-like DNC_RS00865 PF00825 Ribonuclease P DNC_RS00870 PF00444 Ribosomal protein L36 DNC_RS00875 PF00253 Ribosomal protein S14p/S29e DNC_RS00885 PF03780 DNC_RS00885 DNC_RS00890 PF01541 GIY-YIG catalytic domain DNC_RS00890 PF08459 UvrC Helix-hairpin-helix N-terminal DNC_RS00890 PF14520 Helix-hairpin-helix domain DNC_RS00895 PF00488 MutS domain V DNC_RS00895 PF01624 MutS domain I DNC_RS00895 PF05188 MutS domain II DNC_RS00895 PF05190 MutS family domain IV DNC_RS00895 PF05192 MutS domain III DNC_RS00900 PF01807 CHC2 zinc finger DNC_RS00900 PF08275 DNA primase catalytic core, N-terminal domain DNC_RS00900 PF13155 Toprim-like DNC_RS00915 PF02091 Glycyl-tRNA synthetase alpha subunit DNC_RS00915 PF02092 DNC_RS00915 DNC_RS00915 PF05746 DALR anticodon binding domain DNC_RS00920 PF01066 CDP-alcohol phosphatidyltransferase DNC_RS00925 PF00534 Glycosyl transferases group 1 DNC_RS00925 PF08323 Starch synthase catalytic domain DNC_RS00935 PF01386 Ribosomal L25p family DNC_RS00935 PF14693 Ribosomal protein TL5, C-terminal domain DNC_RS00940 PF01195 Peptidyl-tRNA hydrolase DNC_RS00945 PF01250 Ribosomal protein S6 DNC_RS00950 PF01084 Ribosomal protein S18 DNC_RS00955 PF01281 Ribosomal protein L9, N-terminal domain DNC_RS00955 PF03948 Ribosomal protein L9, C-terminal domain DNC_RS00960 PF00288 GHMP kinases N terminal domain DNC_RS00970 PF07399 DNC_RS00970 DNC_RS00975 PF00675 Insulinase (Peptidase family M16) DNC_RS00975 PF05193 Peptidase M16 inactive domain DNC_RS00975 PF16187 DNC_RS00975 DNC_RS00980 PF01553 Acyltransferase DNC_RS00985 PF10150 Ribonuclease E/G family DNC_RS00995 PF02504 Fatty acid synthesis protein DNC_RS01000 PF02415 DNC_RS01000 DNC_RS01000 PF03797 Autotransporter beta-domain DNC_RS01000 PF07548 DNC_RS01000 DNC_RS01010 PF12732 DNC_RS01010 DNC_RS01020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNC_RS01020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNC_RS01020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNC_RS01020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNC_RS01025 PF01380 SIS domain DNC_RS01025 PF13522 Glutamine amidotransferase domain DNC_RS01030 PF03222 Tryptophan/tyrosine permease family DNC_RS01035 PF03222 Tryptophan/tyrosine permease family DNC_RS01040 PF01027 Inhibitor of apoptosis-promoting Bax1 DNC_RS01045 PF00448 SRP54-type protein, GTPase domain DNC_RS01050 PF00549 CoA-ligase DNC_RS01050 PF08442 ATP-grasp domain DNC_RS01055 PF00549 CoA-ligase DNC_RS01055 PF02629 CoA binding domain DNC_RS01060 PF13180 PDZ domain DNC_RS01060 PF13365 Trypsin-like peptidase domain DNC_RS01065 PF00675 Insulinase (Peptidase family M16) DNC_RS01065 PF05193 Peptidase M16 inactive domain DNC_RS01065 PF08367 Peptidase M16C associated DNC_RS01070 PF02646 DNC_RS01070 DNC_RS01075 PF01066 CDP-alcohol phosphatidyltransferase DNC_RS01080 PF00317 Ribonucleotide reductase, all-alpha domain DNC_RS01080 PF02867 Ribonucleotide reductase, barrel domain DNC_RS01080 PF03477 ATP cone domain DNC_RS01085 PF00268 Ribonucleotide reductase, small chain DNC_RS01095 PF06962 Putative rRNA methylase DNC_RS01100 PF01565 FAD binding domain DNC_RS01100 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DNC_RS01105 PF01029 NusB family DNC_RS01110 PF00707 Translation initiation factor IF-3, C-terminal domain DNC_RS01110 PF05198 Translation initiation factor IF-3, N-terminal domain DNC_RS01115 PF01632 Ribosomal protein L35 DNC_RS01120 PF00453 Ribosomal protein L20 DNC_RS01125 PF01409 tRNA synthetases class II core domain (F) DNC_RS01125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DNC_RS01140 PF03739 DNC_RS01140 DNC_RS01145 PF03739 DNC_RS01145 DNC_RS01150 PF01171 PP-loop family DNC_RS01155 PF00004 ATPase family associated with various cellular activities (AAA) DNC_RS01155 PF01434 Peptidase family M41 DNC_RS01160 PF00013 KH domain DNC_RS01160 PF00575 S1 RNA binding domain DNC_RS01160 PF01138 3' exoribonuclease family, domain 1 DNC_RS01160 PF03725 3' exoribonuclease family, domain 2 DNC_RS01160 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DNC_RS01165 PF00312 Ribosomal protein S15 DNC_RS01170 PF14437 DNC_RS01170 DNC_RS01185 PF05302 DNC_RS01185 DNC_RS01190 PF05302 DNC_RS01190 DNC_RS01195 PF05302 DNC_RS01195 DNC_RS01210 PF00557 Metallopeptidase family M24 DNC_RS01210 PF02810 SEC-C motif DNC_RS01215 PF01914 DNC_RS01215 DNC_RS01220 PF01914 DNC_RS01220 DNC_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS01225 PF09084 NMT1/THI5 like DNC_RS01230 PF00206 Lyase DNC_RS01230 PF10415 Fumarase C C-terminus DNC_RS01235 PF00916 DNC_RS01235 DNC_RS01235 PF01740 STAS domain DNC_RS01245 PF03600 Citrate transporter DNC_RS01250 PF03572 Peptidase family S41 DNC_RS01255 PF02401 LytB protein DNC_RS01270 PF07720 Tetratricopeptide repeat DNC_RS01290 PF00589 Phage integrase family DNC_RS01290 PF02899 Phage integrase, N-terminal SAM-like domain DNC_RS01300 PF00128 Alpha amylase, catalytic domain DNC_RS01300 PF02806 Alpha amylase, C-terminal all-beta domain DNC_RS01300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNC_RS01305 PF02902 Ulp1 protease family, C-terminal catalytic domain DNC_RS01320 PF02902 Ulp1 protease family, C-terminal catalytic domain DNC_RS01325 PF03797 Autotransporter beta-domain DNC_RS01325 PF07548 DNC_RS01325 DNC_RS01330 PF03797 Autotransporter beta-domain DNC_RS01330 PF07548 DNC_RS01330 DNC_RS01335 PF02415 DNC_RS01335 DNC_RS01335 PF03797 Autotransporter beta-domain DNC_RS01335 PF07548 DNC_RS01335 DNC_RS01340 PF02415 DNC_RS01340 DNC_RS01340 PF03797 Autotransporter beta-domain DNC_RS01340 PF07548 DNC_RS01340 DNC_RS01350 PF02415 DNC_RS01350 DNC_RS01350 PF07548 DNC_RS01350 DNC_RS01360 PF04070 DNC_RS01360 DNC_RS01365 PF02686 Glu-tRNAGln amidotransferase C subunit DNC_RS01370 PF01425 Amidase DNC_RS01375 PF02637 GatB domain DNC_RS01375 PF02934 GatB/GatE catalytic domain DNC_RS01395 PF01351 Ribonuclease HII DNC_RS01395 PF11858 Domain of unknown function (DUF3378) DNC_RS01400 PF13413 Helix-turn-helix domain DNC_RS01405 PF03279 DNC_RS01405 DNC_RS01415 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNC_RS01420 PF01654 DNC_RS01420 DNC_RS01425 PF02322 DNC_RS01425 DNC_RS01430 PF02562 PhoH-like protein DNC_RS01430 PF13638 PIN domain DNC_RS01440 PF08239 Bacterial SH3 domain DNC_RS01450 PF00133 tRNA synthetases class I (I, L, M and V) DNC_RS01450 PF08264 Anticodon-binding domain of tRNA DNC_RS01455 PF00717 Peptidase S24-like DNC_RS01465 PF01197 Ribosomal protein L31 DNC_RS01470 PF00472 RF-1 domain DNC_RS01470 PF03462 PCRF domain DNC_RS01475 PF05175 Methyltransferase small domain DNC_RS01480 PF00448 SRP54-type protein, GTPase domain DNC_RS01480 PF02881 SRP54-type protein, helical bundle domain DNC_RS01480 PF02978 Signal peptide binding domain DNC_RS01485 PF00886 Ribosomal protein S16 DNC_RS01490 PF01746 tRNA (Guanine-1)-methyltransferase DNC_RS01495 PF01245 Ribosomal protein L19 DNC_RS01500 PF01351 Ribonuclease HII DNC_RS01505 PF00625 Guanylate kinase DNC_RS01515 PF08264 Anticodon-binding domain of tRNA DNC_RS01515 PF09334 tRNA synthetases class I (M) DNC_RS01520 PF13538 UvrD-like helicase C-terminal domain DNC_RS01520 PF13604 AAA domain DNC_RS01520 PF14490 Helix-hairpin-helix containing domain DNC_RS01525 PF00892 EamA-like transporter family DNC_RS01530 PF09825 DNC_RS01530 DNC_RS01550 PF00692 dUTPase DNC_RS01555 PF05491 Holliday junction DNA helicase ruvB C-terminus DNC_RS01555 PF05496 Holliday junction DNA helicase ruvB N-terminus DNC_RS01560 PF08486 DNC_RS01560 DNC_RS01565 PF00128 Alpha amylase, catalytic domain DNC_RS01565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNC_RS01570 PF05932 Tir chaperone protein (CesT) family DNC_RS01575 PF00436 Single-strand binding protein family DNC_RS01580 PF00883 Cytosol aminopeptidase family, catalytic domain DNC_RS01580 PF02789 Cytosol aminopeptidase family, N-terminal domain DNC_RS01585 PF07382 DNC_RS01585 DNC_RS01615 PF04055 Radical SAM superfamily DNC_RS01630 PF00676 Dehydrogenase E1 component DNC_RS01630 PF02779 Transketolase, pyrimidine binding domain DNC_RS01630 PF16870 DNC_RS01630 DNC_RS01635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNC_RS01635 PF00364 Biotin-requiring enzyme DNC_RS01640 PF02578 Multi-copper polyphenol oxidoreductase laccase DNC_RS01645 PF04551 GcpE protein DNC_RS01655 PF00111 2Fe-2S iron-sulfur cluster binding domain DNC_RS01665 PF00771 FHIPEP family DNC_RS01670 PF04539 Sigma-70 region 3 DNC_RS01670 PF04542 Sigma-70 region 2 DNC_RS01670 PF04545 Sigma-70, region 4 DNC_RS01675 PF00579 tRNA synthetases class I (W and Y) DNC_RS01675 PF01479 S4 domain DNC_RS01680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNC_RS01680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNC_RS01685 PF00009 Elongation factor Tu GTP binding domain DNC_RS01685 PF00679 Elongation factor G C-terminus DNC_RS01685 PF03144 Elongation factor Tu domain 2 DNC_RS01685 PF06421 GTP-binding protein LepA C-terminus DNC_RS01690 PF03219 DNC_RS01690 DNC_RS01710 PF01297 Periplasmic solute binding protein family DNC_RS01715 PF00005 ABC transporter DNC_RS01720 PF00950 DNC_RS01720 DNC_RS01720 PF02742 Iron dependent repressor, metal binding and dimerisation domain DNC_RS01725 PF00950 DNC_RS01725 DNC_RS01730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNC_RS01730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal DNC_RS01730 PF13288 DXP reductoisomerase C-terminal domain DNC_RS01735 PF02163 Peptidase family M50 DNC_RS01745 PF02463 RecF/RecN/SMC N terminal domain DNC_RS01750 PF00712 DNA polymerase III beta subunit, N-terminal domain DNC_RS01750 PF02767 DNA polymerase III beta subunit, central domain DNC_RS01750 PF02768 DNA polymerase III beta subunit, C-terminal domain DNC_RS01755 PF01668 SmpB protein DNC_RS01760 PF02424 ApbE family DNC_RS01765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DNC_RS01765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DNC_RS01770 PF04093 DNC_RS01770 DNC_RS01790 PF13091 PLD-like domain DNC_RS01795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DNC_RS01800 PF00830 Ribosomal L28 family DNC_RS01805 PF02446 4-alpha-glucanotransferase DNC_RS01810 PF05932 Tir chaperone protein (CesT) family DNC_RS01815 PF07201 HrpJ-like domain DNC_RS01820 PF00771 FHIPEP family DNC_RS01825 PF01312 FlhB HrpN YscU SpaS Family DNC_RS01830 PF01926 50S ribosome-binding GTPase DNC_RS01830 PF06071 Protein of unknown function (DUF933) DNC_RS01835 PF01687 Riboflavin kinase DNC_RS01835 PF06574 FAD synthetase DNC_RS01840 PF01509 TruB family pseudouridylate synthase (N terminal domain) DNC_RS01840 PF16198 DNC_RS01840 DNC_RS01845 PF02033 Ribosome-binding factor A DNC_RS01850 PF00009 Elongation factor Tu GTP binding domain DNC_RS01850 PF04760 Translation initiation factor IF-2, N-terminal region DNC_RS01850 PF11987 Translation-initiation factor 2 DNC_RS01855 PF08529 NusA N-terminal domain DNC_RS01855 PF13184 NusA-like KH domain DNC_RS01860 PF00575 S1 RNA binding domain DNC_RS01865 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNC_RS01870 PF01648 4'-phosphopantetheinyl transferase superfamily DNC_RS01880 PF04347 DNC_RS01880 DNC_RS01885 PF08282 haloacid dehalogenase-like hydrolase DNC_RS01890 PF13561 Enoyl-(Acyl carrier protein) reductase DNC_RS01900 PF00849 RNA pseudouridylate synthase DNC_RS01905 PF00633 Helix-hairpin-helix motif DNC_RS01905 PF00730 HhH-GPD superfamily base excision DNA repair protein DNC_RS01905 PF14815 NUDIX domain DNC_RS01910 PF01784 NIF3 (NGG1p interacting factor 3) DNC_RS01920 PF00118 TCP-1/cpn60 chaperonin family DNC_RS01925 PF00166 Chaperonin 10 Kd subunit DNC_RS01930 PF01432 Peptidase family M3 DNC_RS01930 PF08439 Oligopeptidase F DNC_RS01935 PF00004 ATPase family associated with various cellular activities (AAA) DNC_RS01935 PF02861 Clp amino terminal domain DNC_RS01935 PF07724 AAA domain (Cdc48 subfamily) DNC_RS01935 PF10431 C-terminal, D2-small domain, of ClpB protein DNC_RS01940 PF13369 DNC_RS01940 DNC_RS01965 PF04156 DNC_RS01965 DNC_RS01975 PF00834 Ribulose-phosphate 3 epimerase family DNC_RS01980 PF01132 Elongation factor P (EF-P) OB domain DNC_RS01980 PF08207 Elongation factor P (EF-P) KOW-like domain DNC_RS01980 PF09285 Elongation factor P, C-terminal DNC_RS01985 PF00364 Biotin-requiring enzyme DNC_RS01990 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain DNC_RS01990 PF02785 Biotin carboxylase C-terminal domain DNC_RS01990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNC_RS01995 PF00572 Ribosomal protein L13 DNC_RS02000 PF00380 Ribosomal protein S9/S16 DNC_RS02005 PF00877 NlpC/P60 family DNC_RS02010 PF00406 Adenylate kinase DNC_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS02020 PF00005 ABC transporter DNC_RS02030 PF03631 DNC_RS02030 DNC_RS02035 PF13847 Methyltransferase domain DNC_RS02050 PF02230 Phospholipase/Carboxylesterase DNC_RS02055 PF01300 Telomere recombination DNC_RS02060 PF01244 Membrane dipeptidase (Peptidase family M19) DNC_RS02065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNC_RS02070 PF02592 DNC_RS02070 DNC_RS02075 PF02810 SEC-C motif DNC_RS02105 PF00069 Protein kinase domain DNC_RS02105 PF03781 Sulfatase-modifying factor enzyme 1 DNC_RS02110 PF00533 BRCA1 C Terminus (BRCT) domain DNC_RS02110 PF01653 NAD-dependent DNA ligase adenylation domain DNC_RS02110 PF03120 NAD-dependent DNA ligase OB-fold domain DNC_RS02110 PF12826 Helix-hairpin-helix motif DNC_RS02120 PF01494 FAD binding domain DNC_RS02125 PF12146 Putative lysophospholipase DNC_RS02135 PF00471 Ribosomal protein L33 DNC_RS02140 PF02687 DNC_RS02140 DNC_RS02145 PF00005 ABC transporter DNC_RS02150 PF01823 MAC/Perforin domain DNC_RS02155 PF13091 PLD-like domain DNC_RS02160 PF13091 PLD-like domain DNC_RS02165 PF13091 PLD-like domain DNC_RS02170 PF13091 PLD-like domain DNC_RS02175 PF13091 PLD-like domain DNC_RS02180 PF11996 DNC_RS02180 DNC_RS02180 PF12918 TcdB toxin N-terminal helical domain DNC_RS02180 PF12919 TcdA/TcdB catalytic glycosyltransferase domain DNC_RS02185 PF11996 DNC_RS02185 DNC_RS02185 PF12918 TcdB toxin N-terminal helical domain DNC_RS02185 PF12919 TcdA/TcdB catalytic glycosyltransferase domain DNC_RS02190 PF11996 DNC_RS02190 DNC_RS02190 PF12918 TcdB toxin N-terminal helical domain DNC_RS02190 PF12919 TcdA/TcdB catalytic glycosyltransferase domain DNC_RS02195 PF13091 PLD-like domain DNC_RS02200 PF00962 Adenosine/AMP deaminase DNC_RS02205 PF00117 Glutamine amidotransferase class-I DNC_RS02205 PF00958 GMP synthase C terminal domain DNC_RS02205 PF02540 NAD synthase DNC_RS02210 PF00478 IMP dehydrogenase / GMP reductase domain DNC_RS02225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNC_RS02230 PF13091 PLD-like domain DNC_RS02235 PF02600 Disulfide bond formation protein DsbB DNC_RS02240 PF13462 Thioredoxin DNC_RS02255 PF00005 ABC transporter DNC_RS02275 PF02348 Cytidylyltransferase DNC_RS02280 PF00117 Glutamine amidotransferase class-I DNC_RS02280 PF06418 CTP synthase N-terminus DNC_RS02285 PF03652 Uncharacterised protein family (UPF0081) DNC_RS02290 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNC_RS02290 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNC_RS02295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DNC_RS02300 PF13177 DNA polymerase III, delta subunit DNC_RS02305 PF02223 Thymidylate kinase DNC_RS02310 PF00521 DNA gyrase/topoisomerase IV, subunit A DNC_RS02310 PF03989 DNA gyrase C-terminal domain, beta-propeller DNC_RS02315 PF00204 DNA gyrase B DNC_RS02315 PF00986 DNA gyrase B subunit, carboxyl terminus DNC_RS02315 PF01751 Toprim domain DNC_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNC_RS02320 PF05258 DNC_RS02320 DNC_RS02330 PF01702 Queuine tRNA-ribosyltransferase DNC_RS02335 PF00571 CBS domain DNC_RS02335 PF01769 Divalent cation transporter DNC_RS02335 PF03448 MgtE intracellular N domain DNC_RS02350 PF00814 Glycoprotease family DNC_RS02355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNC_RS02360 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS02365 PF12911 DNC_RS02365 DNC_RS02370 PF00005 ABC transporter DNC_RS02370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNC_RS02375 PF00005 ABC transporter DNC_RS02380 PF06685 DNC_RS02380 DNC_RS02385 PF00939 Sodium:sulfate symporter transmembrane region DNC_RS02390 PF00365 Phosphofructokinase DNC_RS02395 PF12146 Putative lysophospholipase DNC_RS02400 PF00365 Phosphofructokinase DNC_RS02415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DNC_RS02420 PF00133 tRNA synthetases class I (I, L, M and V) DNC_RS02420 PF08264 Anticodon-binding domain of tRNA DNC_RS02420 PF09334 tRNA synthetases class I (M) DNC_RS02420 PF13603 Leucyl-tRNA synthetase, Domain 2 DNC_RS02425 PF00202 Aminotransferase class-III DNC_RS02430 PF02622 Uncharacterized ACR, COG1678 DNC_RS02435 PF02577 Bifunctional nuclease DNC_RS02440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNC_RS02455 PF01791 DeoC/LacD family aldolase DNC_RS02460 PF13520 Amino acid permease DNC_RS02465 PF01171 PP-loop family DNC_RS02470 PF00580 UvrD/REP helicase N-terminal domain DNC_RS02470 PF13361 UvrD-like helicase C-terminal domain DNC_RS02475 PF01975 Survival protein SurE DNC_RS02480 PF01040 UbiA prenyltransferase family DNC_RS02485 PF02441 Flavoprotein DNC_RS02490 PF02588 DNC_RS02490 DNC_RS02490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNC_RS02510 PF04156 DNC_RS02510 DNC_RS02515 PF04156 DNC_RS02515 DNC_RS02535 PF04156 DNC_RS02535 DNC_RS02540 PF04156 DNC_RS02540 DNC_RS02545 PF00375 Sodium:dicarboxylate symporter family DNC_RS02550 PF00209 Sodium:neurotransmitter symporter family DNC_RS02570 PF00027 Cyclic nucleotide-binding domain DNC_RS02575 PF00550 Phosphopantetheine attachment site DNC_RS02580 PF13561 Enoyl-(Acyl carrier protein) reductase DNC_RS02585 PF00698 Acyl transferase domain DNC_RS02590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNC_RS02590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNC_RS02595 PF13662 Toprim domain DNC_RS02600 PF01103 Surface antigen DNC_RS02600 PF07244 Surface antigen variable number repeat DNC_RS02605 PF03938 Outer membrane protein (OmpH-like) DNC_RS02610 PF00132 Bacterial transferase hexapeptide (six repeats) DNC_RS02610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DNC_RS02620 PF00676 Dehydrogenase E1 component DNC_RS02625 PF02779 Transketolase, pyrimidine binding domain DNC_RS02625 PF02780 Transketolase, C-terminal domain DNC_RS02630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNC_RS02630 PF00364 Biotin-requiring enzyme DNC_RS02630 PF02817 e3 binding domain DNC_RS02635 PF00343 Carbohydrate phosphorylase DNC_RS02645 PF00308 Bacterial dnaA protein DNC_RS02645 PF08299 Bacterial dnaA protein helix-turn-helix DNC_RS02645 PF11638 DnaA N-terminal domain DNC_RS02650 PF02096 60Kd inner membrane protein DNC_RS02655 PF01790 DNC_RS02655 DNC_RS02665 PF02517 CAAX protease self-immunity DNC_RS02670 PF03819 MazG nucleotide pyrophosphohydrolase domain DNC_RS02675 PF00571 CBS domain DNC_RS02675 PF01595 DNC_RS02675 DNC_RS02675 PF03471 Transporter associated domain DNC_RS02680 PF01595 DNC_RS02680 DNC_RS02680 PF03471 Transporter associated domain DNC_RS02685 PF00266 Aminotransferase class-V DNC_RS02690 PF13672 Protein phosphatase 2C DNC_RS02695 PF10722 Putative bacterial sensory transduction regulator DNC_RS02700 PF00929 Exonuclease DNC_RS02700 PF12843 DNC_RS02700 DNC_RS02705 PF02621 Menaquinone biosynthesis DNC_RS02715 PF00005 ABC transporter DNC_RS02715 PF00664 ABC transporter transmembrane region DNC_RS02720 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DNC_RS02730 PF00216 Bacterial DNA-binding protein DNC_RS02735 PF01520 N-acetylmuramoyl-L-alanine amidase DNC_RS02740 PF02875 Mur ligase family, glutamate ligase domain DNC_RS02740 PF08245 Mur ligase middle domain DNC_RS02750 PF00905 Penicillin binding protein transpeptidase domain DNC_RS02760 PF01795 MraW methylase family DNC_RS02775 PF00308 Bacterial dnaA protein DNC_RS02775 PF08299 Bacterial dnaA protein helix-turn-helix DNC_RS02775 PF11638 DnaA N-terminal domain DNC_RS02780 PF04519 DNC_RS02780 DNC_RS02790 PF03116 DNC_RS02790 DNC_RS02795 PF04205 FMN-binding domain DNC_RS02800 PF02508 DNC_RS02800 DNC_RS02805 PF02508 DNC_RS02805 DNC_RS02810 PF01597 Glycine cleavage H-protein DNC_RS02820 PF13091 PLD-like domain DNC_RS02825 PF03099 Biotin/lipoate A/B protein ligase family DNC_RS02830 PF00004 ATPase family associated with various cellular activities (AAA) DNC_RS02830 PF02151 UvrB/uvrC motif DNC_RS02830 PF02861 Clp amino terminal domain DNC_RS02830 PF07724 AAA domain (Cdc48 subfamily) DNC_RS02830 PF10431 C-terminal, D2-small domain, of ClpB protein DNC_RS02835 PF03054 tRNA methyl transferase DNC_RS02850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNC_RS02850 PF12728 Helix-turn-helix domain DNC_RS02855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNC_RS02860 PF00692 dUTPase DNC_RS02865 PF01039 Carboxyl transferase domain DNC_RS02870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DNC_RS02870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DNC_RS02875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNC_RS02875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNC_RS02875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNC_RS02875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNC_RS02880 PF16802 DNC_RS02880 DNC_RS02885 PF00035 Double-stranded RNA binding motif DNC_RS02885 PF14622 Ribonuclease-III-like DNC_RS02890 PF05362 Lon protease (S16) C-terminal proteolytic domain DNC_RS02890 PF13481 AAA domain DNC_RS02895 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DNC_RS02910 PF00069 Protein kinase domain DNC_RS02915 PF00133 tRNA synthetases class I (I, L, M and V) DNC_RS02915 PF08264 Anticodon-binding domain of tRNA DNC_RS02915 PF10458 Valyl tRNA synthetase tRNA binding arm DNC_RS02925 PF00137 ATP synthase subunit C DNC_RS02935 PF01813 ATP synthase subunit D DNC_RS02940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNC_RS02940 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNC_RS02945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNC_RS02945 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNC_RS02945 PF16886 DNC_RS02945 DNC_RS02950 PF10962 DNC_RS02950 DNC_RS02955 PF06188 DNC_RS02955 DNC_RS02970 PF00923 Transaldolase DNC_RS02975 PF00623 RNA polymerase Rpb1, domain 2 DNC_RS02975 PF04983 RNA polymerase Rpb1, domain 3 DNC_RS02975 PF04997 RNA polymerase Rpb1, domain 1 DNC_RS02975 PF04998 RNA polymerase Rpb1, domain 5 DNC_RS02975 PF05000 RNA polymerase Rpb1, domain 4 DNC_RS02980 PF00562 RNA polymerase Rpb2, domain 6 DNC_RS02980 PF04560 RNA polymerase Rpb2, domain 7 DNC_RS02980 PF04561 RNA polymerase Rpb2, domain 2 DNC_RS02980 PF04563 RNA polymerase beta subunit DNC_RS02980 PF04565 RNA polymerase Rpb2, domain 3 DNC_RS02980 PF10385 RNA polymerase beta subunit external 1 domain DNC_RS02985 PF00542 Ribosomal protein L7/L12 C-terminal domain DNC_RS02985 PF16320 DNC_RS02985 DNC_RS02990 PF00466 Ribosomal protein L10 DNC_RS02995 PF00687 Ribosomal protein L1p/L10e family DNC_RS03000 PF00298 Ribosomal protein L11, RNA binding domain DNC_RS03000 PF03946 Ribosomal protein L11, N-terminal domain DNC_RS03005 PF02357 Transcription termination factor nusG DNC_RS03010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DNC_RS03020 PF00009 Elongation factor Tu GTP binding domain DNC_RS03020 PF03143 Elongation factor Tu C-terminal domain DNC_RS03020 PF03144 Elongation factor Tu domain 2 DNC_RS03030 PF01176 Translation initiation factor 1A / IF-1 DNC_RS03040 PF02657 Fe-S metabolism associated domain DNC_RS03045 PF05095 DNC_RS03045 DNC_RS03055 PF00271 Helicase conserved C-terminal domain DNC_RS03055 PF03457 Helicase associated domain DNC_RS03055 PF04851 Type III restriction enzyme, res subunit DNC_RS03055 PF13156 DNC_RS03055 DNC_RS03060 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DNC_RS03065 PF00121 Triosephosphate isomerase DNC_RS03070 PF02601 DNC_RS03070 DNC_RS03070 PF13742 DNC_RS03070 DNC_RS03075 PF02609 Exonuclease VII small subunit DNC_RS03085 PF02779 Transketolase, pyrimidine binding domain DNC_RS03085 PF02780 Transketolase, C-terminal domain DNC_RS03085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNC_RS03090 PF00224 Pyruvate kinase, barrel domain DNC_RS03090 PF02887 Pyruvate kinase, alpha/beta domain DNC_RS03100 PF12169 DNA polymerase III subunits gamma and tau domain III DNC_RS03100 PF13177 DNA polymerase III, delta subunit DNC_RS03105 PF02575 YbaB/EbfC DNA-binding family DNC_RS03110 PF00391 PEP-utilising enzyme, mobile domain DNC_RS03110 PF02896 PEP-utilising enzyme, TIM barrel domain DNC_RS03110 PF05524 PEP-utilising enzyme, N-terminal DNC_RS03115 PF00381 PTS HPr component phosphorylation site DNC_RS03130 PF03772 DNC_RS03130 DNC_RS03135 PF00676 Dehydrogenase E1 component DNC_RS03135 PF02779 Transketolase, pyrimidine binding domain DNC_RS03135 PF02780 Transketolase, C-terminal domain DNC_RS03140 PF00226 DnaJ domain DNC_RS03140 PF00684 DnaJ central domain DNC_RS03140 PF01556 DnaJ C terminal domain DNC_RS03145 PF01165 Ribosomal protein S21 DNC_RS03150 PF00814 Glycoprotease family DNC_RS03155 PF00004 ATPase family associated with various cellular activities (AAA) DNC_RS03155 PF02190 ATP-dependent protease La (LON) domain DNC_RS03155 PF05362 Lon protease (S16) C-terminal proteolytic domain DNC_RS03165 PF00753 Metallo-beta-lactamase superfamily DNC_RS03170 PF00589 Phage integrase family DNC_RS03170 PF13495 Phage integrase, N-terminal SAM-like domain DNC_RS03175 PF00005 ABC transporter DNC_RS03175 PF12848 ABC transporter DNC_RS03180 PF02545 Maf-like protein DNC_RS03195 PF03840 Preprotein translocase SecG subunit DNC_RS03200 PF01327 Polypeptide deformylase DNC_RS03205 PF00398 Ribosomal RNA adenine dimethylase DNC_RS03215 PF03190 Protein of unknown function, DUF255 DNC_RS03235 PF02632 BioY family DNC_RS03245 PF00701 Dihydrodipicolinate synthetase family DNC_RS03250 PF00696 Amino acid kinase family DNC_RS03255 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNC_RS03255 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNC_RS03260 PF01113 Dihydrodipicolinate reductase, N-terminus DNC_RS03260 PF05173 Dihydrodipicolinate reductase, C-terminus DNC_RS03270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNC_RS03275 PF01202 Shikimate kinase DNC_RS03280 PF01264 Chorismate synthase DNC_RS03285 PF01761 3-dehydroquinate synthase DNC_RS03290 PF01487 Type I 3-dehydroquinase DNC_RS03290 PF01488 Shikimate / quinate 5-dehydrogenase DNC_RS03290 PF08501 Shikimate dehydrogenase substrate binding domain DNC_RS03295 PF11019 DNC_RS03295 DNC_RS03300 PF04966 Carbohydrate-selective porin, OprB family DNC_RS03305 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DNC_RS03310 PF13520 Amino acid permease DNC_RS03315 PF01266 FAD dependent oxidoreductase DNC_RS03320 PF00056 lactate/malate dehydrogenase, NAD binding domain DNC_RS03320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNC_RS03330 PF00342 Phosphoglucose isomerase DNC_RS03335 PF01926 50S ribosome-binding GTPase DNC_RS03335 PF13167 DNC_RS03335 DNC_RS03335 PF16360 DNC_RS03335 DNC_RS03340 PF12706 Beta-lactamase superfamily domain DNC_RS03345 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNC_RS03350 PF00793 DAHP synthetase I family DNC_RS03370 PF01230 HIT domain DNC_RS03375 PF03690 DNC_RS03375 DNC_RS03385 PF03641 Possible lysine decarboxylase DNC_RS03390 PF02594 Uncharacterised ACR, YggU family COG1872 DNC_RS03395 PF06727 DNC_RS03395 DNC_RS03400 PF00155 Aminotransferase class I and II DNC_RS03405 PF04392 ABC transporter substrate binding protein DNC_RS03415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNC_RS03415 PF03129 Anticodon binding domain DNC_RS03415 PF04073 Aminoacyl-tRNA editing domain DNC_RS03420 PF01628 HrcA protein C terminal domain DNC_RS03425 PF01025 GrpE DNC_RS03430 PF00012 Hsp70 protein DNC_RS03435 PF00773 RNB domain DNC_RS03435 PF08206 Ribonuclease B OB domain DNC_RS03440 PF02591 Putative zinc ribbon domain DNC_RS03445 PF00571 CBS domain DNC_RS03445 PF01380 SIS domain DNC_RS03450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNC_RS03450 PF00364 Biotin-requiring enzyme DNC_RS03450 PF02817 e3 binding domain DNC_RS03455 PF00375 Sodium:dicarboxylate symporter family DNC_RS03460 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DNC_RS03465 PF00588 SpoU rRNA Methylase family DNC_RS03465 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNC_RS03470 PF10672 S-adenosylmethionine-dependent methyltransferase DNC_RS03475 PF00677 Lumazine binding domain DNC_RS03480 PF03477 ATP cone domain DNC_RS03485 PF01258 Prokaryotic dksA/traR C4-type zinc finger DNC_RS03490 PF01252 DNC_RS03490 DNC_RS03495 PF01235 DNC_RS03495 DNC_RS03500 PF01743 Poly A polymerase head domain DNC_RS03500 PF12627 Probable RNA and SrmB- binding site of polymerase A DNC_RS03505 PF02684 DNC_RS03505 DNC_RS03505 PF07578 Lipid A Biosynthesis N-terminal domain DNC_RS03510 PF02415 DNC_RS03510 DNC_RS03510 PF07548 DNC_RS03510 DNC_RS03515 PF02415 DNC_RS03515 DNC_RS03515 PF03797 Autotransporter beta-domain DNC_RS03515 PF07548 DNC_RS03515 DNC_RS03520 PF03797 Autotransporter beta-domain DNC_RS03520 PF07548 DNC_RS03520 DNC_RS03530 PF01297 Periplasmic solute binding protein family DNC_RS03535 PF00005 ABC transporter DNC_RS03540 PF00950 DNC_RS03540 DNC_RS03545 PF01018 GTP1/OBG DNC_RS03545 PF01926 50S ribosome-binding GTPase DNC_RS03550 PF01016 Ribosomal L27 protein DNC_RS03555 PF00829 Ribosomal prokaryotic L21 protein DNC_RS03565 PF04367 DNC_RS03565 DNC_RS03570 PF02130 Uncharacterized protein family UPF0054 DNC_RS03575 PF00571 CBS domain DNC_RS03575 PF03471 Transporter associated domain DNC_RS03580 PF01740 STAS domain DNC_RS03585 PF12228 DNC_RS03585 DNC_RS03590 PF04055 Radical SAM superfamily DNC_RS03595 PF02621 Menaquinone biosynthesis DNC_RS03600 PF01209 ubiE/COQ5 methyltransferase family DNC_RS03605 PF03682 DNC_RS03605 DNC_RS03610 PF01678 Diaminopimelate epimerase DNC_RS03615 PF00574 Clp protease DNC_RS03620 PF00464 Serine hydroxymethyltransferase DNC_RS03625 PF02602 Uroporphyrinogen-III synthase HemD DNC_RS03630 PF02542 YgbB family DNC_RS03635 PF00175 Oxidoreductase NAD-binding domain DNC_RS03635 PF00667 FAD binding domain DNC_RS03640 PF00338 Ribosomal protein S10p/S20e DNC_RS03645 PF00009 Elongation factor Tu GTP binding domain DNC_RS03645 PF00679 Elongation factor G C-terminus DNC_RS03645 PF03144 Elongation factor Tu domain 2 DNC_RS03645 PF03764 Elongation factor G, domain IV DNC_RS03645 PF14492 Elongation Factor G, domain II DNC_RS03650 PF00177 Ribosomal protein S7p/S5e DNC_RS03655 PF00164 Ribosomal protein S12/S23 DNC_RS03665 PF00595 PDZ domain (Also known as DHR or GLGF) DNC_RS03665 PF03572 Peptidase family S41 DNC_RS03670 PF05745 DNC_RS03670 DNC_RS03680 PF01345 DNC_RS03680 DNC_RS03680 PF03504 DNC_RS03680 DNC_RS03685 PF03503 DNC_RS03685 DNC_RS03695 PF00749 tRNA synthetases class I (E and Q), catalytic domain DNC_RS03700 PF12728 Helix-turn-helix domain DNC_RS03705 PF01368 DHH family DNC_RS03705 PF02272 DHHA1 domain DNC_RS03710 PF02355 Protein export membrane protein DNC_RS03720 PF01255 Putative undecaprenyl diphosphate synthase DNC_RS03725 PF01148 Cytidylyltransferase family DNC_RS03730 PF02224 Cytidylate kinase DNC_RS03735 PF01553 Acyltransferase DNC_RS03740 PF00750 tRNA synthetases class I (R) DNC_RS03740 PF03485 Arginyl tRNA synthetase N terminal domain DNC_RS03740 PF05746 DALR anticodon binding domain DNC_RS03745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNC_RS03750 PF07577 DNC_RS03750 DNC_RS03755 PF01709 Transcriptional regulator DNC_RS03760 PF00583 Acetyltransferase (GNAT) family DNC_RS03765 PF00472 RF-1 domain DNC_RS03765 PF03462 PCRF domain DNC_RS03770 PF02201 SWIB/MDM2 domain DNC_RS03775 PF00149 Calcineurin-like phosphoesterase DNC_RS03780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DNC_RS03785 PF01416 tRNA pseudouridine synthase DNC_RS03790 PF13419 Haloacid dehalogenase-like hydrolase DNC_RS03810 PF00512 His Kinase A (phospho-acceptor) domain DNC_RS03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNC_RS03810 PF13188 PAS domain DNC_RS03815 PF00072 Response regulator receiver domain DNC_RS03815 PF00158 Sigma-54 interaction domain DNC_RS03825 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DNC_RS03830 PF02565 Recombination protein O C terminal DNC_RS03850 PF02582 DNC_RS03850 DNC_RS03855 PF01809 DNC_RS03855 DNC_RS03865 PF01588 Putative tRNA binding domain DNC_RS03865 PF03147 Ferredoxin-fold anticodon binding domain DNC_RS03865 PF03483 B3/4 domain DNC_RS03865 PF03484 tRNA synthetase B5 domain DNC_RS03875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNC_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component DNC_RS03890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNC_RS03895 PF01522 Polysaccharide deacetylase DNC_RS03915 PF00762 Ferrochelatase DNC_RS03920 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNC_RS03925 PF03602 Conserved hypothetical protein 95 DNC_RS03930 PF00149 Calcineurin-like phosphoesterase DNC_RS03935 PF00483 Nucleotidyl transferase DNC_RS03945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNC_RS03945 PF07497 Rho termination factor, RNA-binding domain DNC_RS03945 PF07498 Rho termination factor, N-terminal domain DNC_RS03950 PF01121 Dephospho-CoA kinase DNC_RS03955 PF00476 DNA polymerase family A DNC_RS03955 PF01367 5'-3' exonuclease, C-terminal SAM fold DNC_RS03955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNC_RS03960 PF01343 Peptidase family S49 DNC_RS03965 PF03219 DNC_RS03965 DNC_RS03970 PF01066 CDP-alcohol phosphatidyltransferase DNC_RS03985 PF00772 DnaB-like helicase N terminal domain DNC_RS03985 PF03796 DnaB-like helicase C terminal domain DNC_RS03990 PF01134 Glucose inhibited division protein A DNC_RS03990 PF13932 GidA associated domain 3 DNC_RS04000 PF00334 Nucleoside diphosphate kinase DNC_RS04005 PF01330 RuvA N terminal domain DNC_RS04005 PF14520 Helix-hairpin-helix domain DNC_RS04010 PF02075 Crossover junction endodeoxyribonuclease RuvC DNC_RS04030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNC_RS04030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNC_RS04035 PF01196 Ribosomal protein L17 DNC_RS04040 PF01000 RNA polymerase Rpb3/RpoA insert domain DNC_RS04040 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DNC_RS04040 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DNC_RS04045 PF00411 Ribosomal protein S11 DNC_RS04050 PF00416 Ribosomal protein S13/S18 DNC_RS04055 PF00344 SecY translocase DNC_RS04060 PF00828 Ribosomal protein L18e/L15 DNC_RS04065 PF00333 Ribosomal protein S5, N-terminal domain DNC_RS04065 PF03719 Ribosomal protein S5, C-terminal domain DNC_RS04070 PF00861 Ribosomal L18p/L5e family DNC_RS04075 PF00347 Ribosomal protein L6 DNC_RS04080 PF00410 Ribosomal protein S8 DNC_RS04085 PF00281 Ribosomal protein L5 DNC_RS04085 PF00673 ribosomal L5P family C-terminus DNC_RS04090 PF00467 KOW motif DNC_RS04090 PF17136 DNC_RS04090 DNC_RS04095 PF00238 Ribosomal protein L14p/L23e DNC_RS04100 PF00366 Ribosomal protein S17 DNC_RS04105 PF00831 Ribosomal L29 protein DNC_RS04110 PF00252 Ribosomal protein L16p/L10e DNC_RS04115 PF00189 Ribosomal protein S3, C-terminal domain DNC_RS04115 PF07650 KH domain DNC_RS04120 PF00237 Ribosomal protein L22p/L17e DNC_RS04125 PF00203 Ribosomal protein S19 DNC_RS04130 PF00181 Ribosomal Proteins L2, RNA binding domain DNC_RS04130 PF03947 Ribosomal Proteins L2, C-terminal domain DNC_RS04135 PF00276 Ribosomal protein L23 DNC_RS04140 PF00573 Ribosomal protein L4/L1 family DNC_RS04145 PF00297 Ribosomal protein L3 DNC_RS04155 PF00551 Formyl transferase DNC_RS04155 PF02911 Formyl transferase, C-terminal domain DNC_RS04160 PF00132 Bacterial transferase hexapeptide (six repeats) DNC_RS04160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DNC_RS04165 PF07977 FabA-like domain DNC_RS04170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DNC_RS04175 PF00795 Carbon-nitrogen hydrolase DNC_RS04180 PF03061 Thioesterase superfamily DNC_RS04185 PF00929 Exonuclease DNC_RS04185 PF12843 DNC_RS04185 DNC_RS04190 PF02367 Uncharacterised P-loop hydrolase UPF0079 DNC_RS04195 PF10915 DNC_RS04195 DNC_RS04205 PF00085 Thioredoxin DNC_RS04210 PF00588 SpoU rRNA Methylase family DNC_RS04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNC_RS04215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DNC_RS04220 PF00152 tRNA synthetases class II (D, K and N) DNC_RS04220 PF01336 OB-fold nucleic acid binding domain DNC_RS04220 PF02938 GAD domain DNC_RS04225 PF03129 Anticodon binding domain DNC_RS04225 PF13393 Histidyl-tRNA synthetase DNC_RS04230 PF07690 Major Facilitator Superfamily DNC_RS04235 PF02811 PHP domain DNC_RS04235 PF07733 Bacterial DNA polymerase III alpha subunit DNC_RS04235 PF14579 Helix-hairpin-helix motif DNC_RS04240 PF14681 Uracil phosphoribosyltransferase DNC_RS04250 PF13174 Tetratricopeptide repeat DNC_RS04250 PF13525 Outer membrane lipoprotein DNC_RS04255 PF04390 Lipopolysaccharide-assembly DNC_RS04260 PF13581 Histidine kinase-like ATPase domain DNC_RS04270 PF00768 D-alanyl-D-alanine carboxypeptidase DNC_RS04280 PF01189 NOL1/NOP2/sun family DNC_RS04285 PF05525 DNC_RS04285 DNC_RS04290 PF00176 SNF2 family N-terminal domain DNC_RS04290 PF00271 Helicase conserved C-terminal domain DNC_RS04290 PF04434 DNC_RS04290 DNC_RS04300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNC_RS04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNC_RS04305 PF04055 Radical SAM superfamily DNC_RS04305 PF16881 DNC_RS04305 DNC_RS04310 PF01514 Secretory protein of YscJ/FliF family DNC_RS04320 PF02108 DNC_RS04320 DNC_RS04325 PF00813 DNC_RS04325 DNC_RS04330 PF01313 DNC_RS04330 DNC_RS04335 PF01311 DNC_RS04335 DNC_RS04350 PF07379 DNC_RS04350 DNC_RS04365 PF00482 Type II secretion system (T2SS), protein F DNC_RS04370 PF00437 Type II/IV secretion system protein DNC_RS04370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DNC_RS04375 PF00263 DNC_RS04375 DNC_RS04375 PF03958 Bacterial type II/III secretion system short domain DNC_RS04385 PF00557 Metallopeptidase family M24 DNC_RS04385 PF01321 Creatinase/Prolidase N-terminal domain DNC_RS04390 PF01119 DNA mismatch repair protein, C-terminal domain DNC_RS04390 PF08676 MutL C terminal dimerisation domain DNC_RS04390 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNC_RS04395 PF07720 Tetratricopeptide repeat DNC_RS04410 PF04888 DNC_RS04410 DNC_RS04415 PF00892 EamA-like transporter family DNC_RS04420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNC_RS04420 PF02824 TGS domain DNC_RS04420 PF03129 Anticodon binding domain DNC_RS04420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNC_RS04425 PF13614 AAA domain DNC_RS04430 PF03677 DNC_RS04430 DNC_RS04440 PF00579 tRNA synthetases class I (W and Y) DNC_RS04445 PF00271 Helicase conserved C-terminal domain DNC_RS04445 PF02151 UvrB/uvrC motif DNC_RS04445 PF04851 Type III restriction enzyme, res subunit DNC_RS04445 PF12344 Ultra-violet resistance protein B DNC_RS04450 PF00113 Enolase, C-terminal TIM barrel domain DNC_RS04450 PF03952 Enolase, N-terminal domain DNC_RS04455 PF00672 HAMP domain DNC_RS04455 PF07228 Stage II sporulation protein E (SpoIIE) DNC_RS04460 PF07228 Stage II sporulation protein E (SpoIIE) DNC_RS04470 PF13085 2Fe-2S iron-sulfur cluster binding domain DNC_RS04470 PF13183 4Fe-4S dicluster domain DNC_RS04475 PF00890 FAD binding domain DNC_RS04475 PF02910 Fumarate reductase flavoprotein C-term DNC_RS04485 PF01026 TatD related DNase DNC_RS04490 PF02683 DNC_RS04490 DNC_RS04490 PF11412 Disulphide bond corrector protein DsbC DNC_RS04490 PF13899 Thioredoxin-like DNC_RS04495 PF01618 DNC_RS04495 DNC_RS04500 PF02472 Biopolymer transport protein ExbD/TolR DNC_RS04510 PF07676 WD40-like Beta Propeller Repeat DNC_RS04515 PF00691 OmpA family DNC_RS04520 PF01476 LysM domain DNC_RS04530 PF00578 AhpC/TSA family DNC_RS04530 PF10417 C-terminal domain of 1-Cys peroxiredoxin DNC_RS04540 PF00118 TCP-1/cpn60 chaperonin family DNC_RS04545 PF07075 Protein of unknown function (DUF1343) DNC_RS04550 PF01725 Ham1 family DNC_RS04560 PF03167 Uracil DNA glycosylase superfamily DNC_RS04565 PF00580 UvrD/REP helicase N-terminal domain DNC_RS04565 PF13361 UvrD-like helicase C-terminal domain DNC_RS04570 PF00309 DNC_RS04570 DNC_RS04570 PF04552 Sigma-54, DNA binding domain DNC_RS04570 PF04963 Sigma-54 factor, core binding domain DNC_RS04575 PF03070 TENA/THI-4/PQQC family DNC_RS04580 PF01996 F420-0:Gamma-glutamyl ligase DNC_RS04585 PF00186 Dihydrofolate reductase DNC_RS04590 PF00809 Pterin binding enzyme DNC_RS04590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DNC_RS04595 PF02152 Dihydroneopterin aldolase DNC_RS04600 PF00140 Sigma-70 factor, region 1 DNC_RS04600 PF03979 Sigma-70 factor, region 1 DNC_RS04600 PF04539 Sigma-70 region 3 DNC_RS04600 PF04542 Sigma-70 region 2 DNC_RS04600 PF04545 Sigma-70, region 4 DNC_RS04605 PF06785 DNC_RS04605 DNC_RS04615 PF01649 Ribosomal protein S20 DNC_RS04625 PF04518 DNC_RS04625 DNC_RS04630 PF04518 DNC_RS04630 DNC_RS04635 PF04518 DNC_RS04635 DNC_RS04650 PF03023 DNC_RS04650 DNC_RS04655 PF01261 Xylose isomerase-like TIM barrel DNC_RS04660 PF00163 Ribosomal protein S4/S9 N-terminal domain DNC_RS04660 PF01479 S4 domain DNC_RS04665 PF00581 Rhodanese-like domain DNC_RS04665 PF12368 DNC_RS04665 DNC_RS04670 PF00348 Polyprenyl synthetase DNC_RS04675 PF00132 Bacterial transferase hexapeptide (six repeats) DNC_RS04680 PF00486 Transcriptional regulatory protein, C terminal DNC_RS04695 PF02511 Thymidylate synthase complementing protein