CHPS25_RS00005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS00005	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CHPS25_RS00030	PWY-5913	TCA cycle VI (obligate autotrophs)
CHPS25_RS00030	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CHPS25_RS00030	PWY-6638	sulfolactate degradation III
CHPS25_RS00030	PWY-6642	(<i>R</i>)-cysteate degradation
CHPS25_RS00030	PWY-6643	coenzyme M biosynthesis II
CHPS25_RS00030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CHPS25_RS00030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CHPS25_RS00030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CHPS25_RS00115	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CHPS25_RS00115	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CHPS25_RS00155	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS00190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS00300	PWY-6823	molybdenum cofactor biosynthesis
CHPS25_RS00300	PWY-6891	thiazole biosynthesis II (Bacillus)
CHPS25_RS00300	PWY-6892	thiazole biosynthesis I (E. coli)
CHPS25_RS00300	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CHPS25_RS00330	PWY-6854	ethylene biosynthesis III (microbes)
CHPS25_RS00340	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS00340	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS00340	PWY-6886	1-butanol autotrophic biosynthesis
CHPS25_RS00340	PWY-6901	superpathway of glucose and xylose degradation
CHPS25_RS00340	PWY-7003	glycerol degradation to butanol
CHPS25_RS00360	PWY-6825	phosphatidylcholine biosynthesis V
CHPS25_RS00430	PWY-6004	glycine betaine biosynthesis V (from glycine)
CHPS25_RS00470	PWY-2201	folate transformations I
CHPS25_RS00470	PWY-5497	purine nucleobases degradation II (anaerobic)
CHPS25_RS00475	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CHPS25_RS00475	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CHPS25_RS00475	PWY-5989	stearate biosynthesis II (bacteria and plants)
CHPS25_RS00475	PWY-5994	palmitate biosynthesis I (animals and fungi)
CHPS25_RS00475	PWY-6113	superpathway of mycolate biosynthesis
CHPS25_RS00475	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CHPS25_RS00475	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CHPS25_RS00475	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CHPS25_RS00475	PWY-7663	gondoate biosynthesis (anaerobic)
CHPS25_RS00475	PWY-7664	oleate biosynthesis IV (anaerobic)
CHPS25_RS00475	PWY-7858	CHPS25_RS00475
CHPS25_RS00475	PWYG-321	mycolate biosynthesis
CHPS25_RS00610	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS00610	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS00610	PWY-6901	superpathway of glucose and xylose degradation
CHPS25_RS00610	PWY-7003	glycerol degradation to butanol
CHPS25_RS00640	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CHPS25_RS00640	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CHPS25_RS00640	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS00640	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS00640	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CHPS25_RS00640	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CHPS25_RS00640	PWY-7205	CMP phosphorylation
CHPS25_RS00640	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CHPS25_RS00640	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS00640	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS00640	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS00640	PWY-7224	purine deoxyribonucleosides salvage
CHPS25_RS00640	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS00640	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS00675	PWY-5269	cardiolipin biosynthesis II
CHPS25_RS00675	PWY-5668	cardiolipin biosynthesis I
CHPS25_RS00675	PWY-7817	CHPS25_RS00675
CHPS25_RS00695	PWY-7851	CHPS25_RS00695
CHPS25_RS00700	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS00710	PWY-5686	UMP biosynthesis
CHPS25_RS00710	PWY-7790	CHPS25_RS00710
CHPS25_RS00710	PWY-7791	CHPS25_RS00710
CHPS25_RS00715	PWY-622	starch biosynthesis
CHPS25_RS00875	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS00915	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CHPS25_RS00915	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CHPS25_RS00930	PWY-7205	CMP phosphorylation
CHPS25_RS00965	PWY-7805	CHPS25_RS00965
CHPS25_RS00965	PWY-7807	CHPS25_RS00965
CHPS25_RS00980	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS01045	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS01095	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CHPS25_RS01095	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CHPS25_RS01095	PWY-6897	thiamin salvage II
CHPS25_RS01095	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CHPS25_RS01095	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CHPS25_RS01095	PWY-7356	thiamin salvage IV (yeast)
CHPS25_RS01095	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CHPS25_RS01100	PWY-6897	thiamin salvage II
CHPS25_RS01100	PWY-7356	thiamin salvage IV (yeast)
CHPS25_RS01100	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CHPS25_RS01145	PWY-6167	flavin biosynthesis II (archaea)
CHPS25_RS01145	PWY-6168	flavin biosynthesis III (fungi)
CHPS25_RS01145	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS01200	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS01200	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CHPS25_RS01205	PWY-1622	formaldehyde assimilation I (serine pathway)
CHPS25_RS01205	PWY-181	photorespiration
CHPS25_RS01205	PWY-2161	folate polyglutamylation
CHPS25_RS01205	PWY-2201	folate transformations I
CHPS25_RS01205	PWY-3661	glycine betaine degradation I
CHPS25_RS01205	PWY-3661-1	glycine betaine degradation II (mammalian)
CHPS25_RS01205	PWY-3841	folate transformations II
CHPS25_RS01205	PWY-5497	purine nucleobases degradation II (anaerobic)
CHPS25_RS01215	PWY-2941	L-lysine biosynthesis II
CHPS25_RS01215	PWY-5097	L-lysine biosynthesis VI
CHPS25_RS01225	PWY-5839	menaquinol-7 biosynthesis
CHPS25_RS01225	PWY-5844	menaquinol-9 biosynthesis
CHPS25_RS01225	PWY-5849	menaquinol-6 biosynthesis
CHPS25_RS01225	PWY-5890	menaquinol-10 biosynthesis
CHPS25_RS01225	PWY-5891	menaquinol-11 biosynthesis
CHPS25_RS01225	PWY-5892	menaquinol-12 biosynthesis
CHPS25_RS01225	PWY-5895	menaquinol-13 biosynthesis
CHPS25_RS01230	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CHPS25_RS01230	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CHPS25_RS01235	PWY-5198	factor 420 biosynthesis
CHPS25_RS01330	PWY-5097	L-lysine biosynthesis VI
CHPS25_RS01385	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CHPS25_RS01385	PWY-6164	3-dehydroquinate biosynthesis I
CHPS25_RS01385	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CHPS25_RS01425	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CHPS25_RS01425	PWY-622	starch biosynthesis
CHPS25_RS01545	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CHPS25_RS01625	PWY-6891	thiazole biosynthesis II (Bacillus)
CHPS25_RS01625	PWY-6892	thiazole biosynthesis I (E. coli)
CHPS25_RS01625	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS01645	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS01645	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS01645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CHPS25_RS01645	PWY-7003	glycerol degradation to butanol
CHPS25_RS01700	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CHPS25_RS01700	PWY-5368	dimorphecolate biosynthesis
CHPS25_RS01700	PWY-5995	linoleate biosynthesis I (plants)
CHPS25_RS01700	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CHPS25_RS01700	PWY-6803	phosphatidylcholine acyl editing
CHPS25_RS01700	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CHPS25_RS01700	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CHPS25_RS01700	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CHPS25_RS01700	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CHPS25_RS01700	PWY-7470	phosphatidylcholine biosynthesis VII
CHPS25_RS01700	PWY-7618	ricinoleate biosynthesis
CHPS25_RS01775	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS01775	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CHPS25_RS01795	PWY-6749	CMP-legionaminate biosynthesis I
CHPS25_RS01800	PWY-6854	ethylene biosynthesis III (microbes)
CHPS25_RS01930	PWY-2201	folate transformations I
CHPS25_RS01975	PWY-6679	jadomycin biosynthesis
CHPS25_RS01975	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CHPS25_RS02015	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CHPS25_RS02015	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CHPS25_RS02015	PWY-5989	stearate biosynthesis II (bacteria and plants)
CHPS25_RS02015	PWY-6113	superpathway of mycolate biosynthesis
CHPS25_RS02015	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CHPS25_RS02015	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CHPS25_RS02015	PWY-7663	gondoate biosynthesis (anaerobic)
CHPS25_RS02015	PWY-7664	oleate biosynthesis IV (anaerobic)
CHPS25_RS02015	PWY-7858	CHPS25_RS02015
CHPS25_RS02015	PWYG-321	mycolate biosynthesis
CHPS25_RS02080	PWY-6823	molybdenum cofactor biosynthesis
CHPS25_RS02080	PWY-6891	thiazole biosynthesis II (Bacillus)
CHPS25_RS02080	PWY-6892	thiazole biosynthesis I (E. coli)
CHPS25_RS02080	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CHPS25_RS02100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS02155	PWY-2201	folate transformations I
CHPS25_RS02185	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CHPS25_RS02190	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CHPS25_RS02295	PWY-7294	xylose degradation IV
CHPS25_RS02295	PWY-7295	L-arabinose degradation IV
CHPS25_RS02295	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS02330	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CHPS25_RS02330	PWY-2201	folate transformations I
CHPS25_RS02330	PWY-3841	folate transformations II
CHPS25_RS02330	PWY-5030	L-histidine degradation III
CHPS25_RS02330	PWY-5497	purine nucleobases degradation II (anaerobic)
CHPS25_RS02330	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CHPS25_RS02360	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CHPS25_RS02360	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CHPS25_RS02360	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CHPS25_RS02360	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CHPS25_RS02360	PWY-6978	plastoquinol-9 biosynthesis II
CHPS25_RS02400	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CHPS25_RS02400	PWY-6167	flavin biosynthesis II (archaea)
CHPS25_RS02400	PWY-6168	flavin biosynthesis III (fungi)
CHPS25_RS02400	PWY-7863	CHPS25_RS02400
CHPS25_RS02435	PWY-6012	acyl carrier protein metabolism I
CHPS25_RS02435	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CHPS25_RS02465	PWY-5941	glycogen degradation II (eukaryotic)
CHPS25_RS02465	PWY-6731	starch degradation III
CHPS25_RS02465	PWY-6737	starch degradation V
CHPS25_RS02465	PWY-7238	sucrose biosynthesis II
CHPS25_RS02510	PWY-4381	fatty acid biosynthesis initiation I
CHPS25_RS02515	PWY-4381	fatty acid biosynthesis initiation I
CHPS25_RS02515	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CHPS25_RS02515	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CHPS25_RS02520	PWY-5367	petroselinate biosynthesis
CHPS25_RS02520	PWY-5515	L-arabinose degradation II
CHPS25_RS02520	PWY-5525	D-glucuronate degradation I
CHPS25_RS02520	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CHPS25_RS02520	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CHPS25_RS02520	PWY-5989	stearate biosynthesis II (bacteria and plants)
CHPS25_RS02520	PWY-5994	palmitate biosynthesis I (animals and fungi)
CHPS25_RS02520	PWY-6113	superpathway of mycolate biosynthesis
CHPS25_RS02520	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CHPS25_RS02520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CHPS25_RS02520	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CHPS25_RS02520	PWY-7663	gondoate biosynthesis (anaerobic)
CHPS25_RS02520	PWY-7664	oleate biosynthesis IV (anaerobic)
CHPS25_RS02520	PWY-7858	CHPS25_RS02520
CHPS25_RS02520	PWYG-321	mycolate biosynthesis
CHPS25_RS02630	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CHPS25_RS02630	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS02630	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS02630	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CHPS25_RS02630	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CHPS25_RS02630	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CHPS25_RS02650	PWY-7533	gliotoxin biosynthesis
CHPS25_RS02695	PWY-5381	pyridine nucleotide cycling (plants)
CHPS25_RS02695	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CHPS25_RS02695	PWY-6596	adenosine nucleotides degradation I
CHPS25_RS02695	PWY-6606	guanosine nucleotides degradation II
CHPS25_RS02695	PWY-6607	guanosine nucleotides degradation I
CHPS25_RS02695	PWY-6608	guanosine nucleotides degradation III
CHPS25_RS02695	PWY-7185	UTP and CTP dephosphorylation I
CHPS25_RS02695	PWY-7821	CHPS25_RS02695
CHPS25_RS02775	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS02795	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CHPS25_RS02795	PWY-6855	chitin degradation I (archaea)
CHPS25_RS02795	PWY-6906	chitin derivatives degradation
CHPS25_RS02800	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CHPS25_RS02810	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CHPS25_RS02810	PWY-5368	dimorphecolate biosynthesis
CHPS25_RS02810	PWY-5995	linoleate biosynthesis I (plants)
CHPS25_RS02810	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CHPS25_RS02810	PWY-6803	phosphatidylcholine acyl editing
CHPS25_RS02810	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CHPS25_RS02810	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CHPS25_RS02810	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CHPS25_RS02810	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CHPS25_RS02810	PWY-7470	phosphatidylcholine biosynthesis VII
CHPS25_RS02810	PWY-7618	ricinoleate biosynthesis
CHPS25_RS02850	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS02850	PWY-5723	Rubisco shunt
CHPS25_RS02925	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS02970	PWY-6700	queuosine biosynthesis
CHPS25_RS03035	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CHPS25_RS03040	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CHPS25_RS03040	PWY-7177	UTP and CTP dephosphorylation II
CHPS25_RS03040	PWY-7185	UTP and CTP dephosphorylation I
CHPS25_RS03095	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS03095	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS03095	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS03095	PWY-7385	1,3-propanediol biosynthesis (engineered)
CHPS25_RS03105	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS03105	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS03105	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS03105	PWY-7385	1,3-propanediol biosynthesis (engineered)
CHPS25_RS03120	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CHPS25_RS03215	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CHPS25_RS03230	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS03230	PWY-5723	Rubisco shunt
CHPS25_RS03315	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS03330	PWY-6829	tRNA methylation (yeast)
CHPS25_RS03330	PWY-7285	methylwyosine biosynthesis
CHPS25_RS03330	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CHPS25_RS03435	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS03435	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CHPS25_RS03435	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS03435	PWY-5723	Rubisco shunt
CHPS25_RS03435	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CHPS25_RS03435	PWY-6886	1-butanol autotrophic biosynthesis
CHPS25_RS03435	PWY-6901	superpathway of glucose and xylose degradation
CHPS25_RS03435	PWY-7003	glycerol degradation to butanol
CHPS25_RS03435	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CHPS25_RS03435	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CHPS25_RS03475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS03480	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS03505	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS03505	PWY-5723	Rubisco shunt
CHPS25_RS03615	PWY-2941	L-lysine biosynthesis II
CHPS25_RS03615	PWY-2942	L-lysine biosynthesis III
CHPS25_RS03615	PWY-5097	L-lysine biosynthesis VI
CHPS25_RS03620	PWY-2941	L-lysine biosynthesis II
CHPS25_RS03620	PWY-2942	L-lysine biosynthesis III
CHPS25_RS03620	PWY-5097	L-lysine biosynthesis VI
CHPS25_RS03620	PWY-6559	spermidine biosynthesis II
CHPS25_RS03620	PWY-6562	norspermidine biosynthesis
CHPS25_RS03620	PWY-7153	grixazone biosynthesis
CHPS25_RS03625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CHPS25_RS03625	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CHPS25_RS03630	PWY-2941	L-lysine biosynthesis II
CHPS25_RS03630	PWY-2942	L-lysine biosynthesis III
CHPS25_RS03630	PWY-5097	L-lysine biosynthesis VI
CHPS25_RS03655	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CHPS25_RS03665	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CHPS25_RS03680	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CHPS25_RS03685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CHPS25_RS03690	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CHPS25_RS03695	PWY-6164	3-dehydroquinate biosynthesis I
CHPS25_RS03700	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CHPS25_RS03700	PWY-6416	quinate degradation II
CHPS25_RS03700	PWY-6707	gallate biosynthesis
CHPS25_RS03715	PWY-40	putrescine biosynthesis I
CHPS25_RS03715	PWY-43	putrescine biosynthesis II
CHPS25_RS03715	PWY-6305	putrescine biosynthesis IV
CHPS25_RS03715	PWY-6834	spermidine biosynthesis III
CHPS25_RS03735	PWY-1622	formaldehyde assimilation I (serine pathway)
CHPS25_RS03735	PWY-5392	reductive TCA cycle II
CHPS25_RS03735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CHPS25_RS03735	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS03735	PWY-5913	TCA cycle VI (obligate autotrophs)
CHPS25_RS03735	PWY-6728	methylaspartate cycle
CHPS25_RS03735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS03735	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CHPS25_RS03735	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CHPS25_RS03745	PWY-3801	sucrose degradation II (sucrose synthase)
CHPS25_RS03745	PWY-5054	sorbitol biosynthesis I
CHPS25_RS03745	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CHPS25_RS03745	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CHPS25_RS03745	PWY-5659	GDP-mannose biosynthesis
CHPS25_RS03745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CHPS25_RS03745	PWY-621	sucrose degradation III (sucrose invertase)
CHPS25_RS03745	PWY-622	starch biosynthesis
CHPS25_RS03745	PWY-6981	chitin biosynthesis
CHPS25_RS03745	PWY-6992	1,5-anhydrofructose degradation
CHPS25_RS03745	PWY-7238	sucrose biosynthesis II
CHPS25_RS03745	PWY-7347	sucrose biosynthesis III
CHPS25_RS03745	PWY-7385	1,3-propanediol biosynthesis (engineered)
CHPS25_RS03790	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS03810	PWY-5392	reductive TCA cycle II
CHPS25_RS03810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CHPS25_RS03810	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS03810	PWY-5913	TCA cycle VI (obligate autotrophs)
CHPS25_RS03810	PWY-6728	methylaspartate cycle
CHPS25_RS03810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS03810	PWY-7254	TCA cycle VII (acetate-producers)
CHPS25_RS03810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CHPS25_RS03820	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS03835	PWY-7799	CHPS25_RS03835
CHPS25_RS03835	PWY-7800	CHPS25_RS03835
CHPS25_RS03945	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CHPS25_RS03945	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CHPS25_RS03965	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CHPS25_RS03965	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS03965	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CHPS25_RS03965	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CHPS25_RS03965	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS03965	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS03965	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS03965	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS03970	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CHPS25_RS03970	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS03970	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CHPS25_RS03970	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CHPS25_RS03970	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS03970	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CHPS25_RS03970	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CHPS25_RS03970	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS04000	PWY-5392	reductive TCA cycle II
CHPS25_RS04000	PWY-5537	pyruvate fermentation to acetate V
CHPS25_RS04000	PWY-5538	pyruvate fermentation to acetate VI
CHPS25_RS04000	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS04000	PWY-5913	TCA cycle VI (obligate autotrophs)
CHPS25_RS04000	PWY-6728	methylaspartate cycle
CHPS25_RS04000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS04000	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CHPS25_RS04005	PWY-5392	reductive TCA cycle II
CHPS25_RS04005	PWY-5537	pyruvate fermentation to acetate V
CHPS25_RS04005	PWY-5538	pyruvate fermentation to acetate VI
CHPS25_RS04005	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS04005	PWY-5913	TCA cycle VI (obligate autotrophs)
CHPS25_RS04005	PWY-6728	methylaspartate cycle
CHPS25_RS04005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS04005	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CHPS25_RS04025	PWY-6749	CMP-legionaminate biosynthesis I
CHPS25_RS04030	PWY-6749	CMP-legionaminate biosynthesis I
CHPS25_RS04040	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CHPS25_RS04040	PWY-622	starch biosynthesis
CHPS25_RS04135	PWY-5667	CDP-diacylglycerol biosynthesis I
CHPS25_RS04135	PWY-6453	stigma estolide biosynthesis
CHPS25_RS04135	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CHPS25_RS04135	PWY-7587	oleate biosynthesis III (cyanobacteria)
CHPS25_RS04155	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS04175	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CHPS25_RS04190	PWY-622	starch biosynthesis
CHPS25_RS04195	PWY-5269	cardiolipin biosynthesis II
CHPS25_RS04195	PWY-5668	cardiolipin biosynthesis I
CHPS25_RS04195	PWY-7817	CHPS25_RS04195
CHPS25_RS04325	PWY-7805	CHPS25_RS04325
CHPS25_RS04325	PWY-7807	CHPS25_RS04325
CHPS25_RS04355	PWY-5198	factor 420 biosynthesis
CHPS25_RS04355	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CHPS25_RS04355	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CHPS25_RS04360	PWY-2781	<i>cis</i>-zeatin biosynthesis
CHPS25_RS04385	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CHPS25_RS04385	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CHPS25_RS04390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CHPS25_RS04390	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CHPS25_RS04390	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CHPS25_RS04390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CHPS25_RS04405	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CHPS25_RS04405	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CHPS25_RS04410	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CHPS25_RS04410	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CHPS25_RS04410	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CHPS25_RS04415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CHPS25_RS04415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CHPS25_RS04450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CHPS25_RS04450	PWY-5723	Rubisco shunt
CHPS25_RS04450	PWY-6891	thiazole biosynthesis II (Bacillus)
CHPS25_RS04450	PWY-6892	thiazole biosynthesis I (E. coli)
CHPS25_RS04450	PWY-6901	superpathway of glucose and xylose degradation
CHPS25_RS04450	PWY-7560	methylerythritol phosphate pathway II
CHPS25_RS04465	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CHPS25_RS04465	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CHPS25_RS04465	PWY-7766	CHPS25_RS04465
CHPS25_RS04475	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CHPS25_RS04565	PWY-6167	flavin biosynthesis II (archaea)
CHPS25_RS04565	PWY-6168	flavin biosynthesis III (fungi)
CHPS25_RS04570	PWY-6167	flavin biosynthesis II (archaea)
CHPS25_RS04570	PWY-6168	flavin biosynthesis III (fungi)
CHPS25_RS04570	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CHPS25_RS04575	PWY-5525	D-glucuronate degradation I
CHPS25_RS04580	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CHPS25_RS04615	PWY-1622	formaldehyde assimilation I (serine pathway)
CHPS25_RS04615	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS04640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CHPS25_RS04655	PWY-5667	CDP-diacylglycerol biosynthesis I
CHPS25_RS04655	PWY-5981	CDP-diacylglycerol biosynthesis III
CHPS25_RS04675	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CHPS25_RS04740	PWY-5669	phosphatidylethanolamine biosynthesis I
CHPS25_RS04770	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CHPS25_RS04770	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CHPS25_RS04775	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CHPS25_RS04775	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CHPS25_RS04855	PWY-7799	CHPS25_RS04855
CHPS25_RS04855	PWY-7800	CHPS25_RS04855
CHPS25_RS04920	PWY-1042	glycolysis IV (plant cytosol)
CHPS25_RS04920	PWY-1622	formaldehyde assimilation I (serine pathway)
CHPS25_RS04920	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CHPS25_RS04920	PWY-5484	glycolysis II (from fructose 6-phosphate)
CHPS25_RS04920	PWY-5723	Rubisco shunt
CHPS25_RS04920	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CHPS25_RS04920	PWY-6886	1-butanol autotrophic biosynthesis
CHPS25_RS04920	PWY-6901	superpathway of glucose and xylose degradation
CHPS25_RS04920	PWY-7003	glycerol degradation to butanol
CHPS25_RS04920	PWY-7124	ethylene biosynthesis V (engineered)
CHPS25_RS04920	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CHPS25_RS04945	PWY-3781	aerobic respiration I (cytochrome c)
CHPS25_RS04945	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CHPS25_RS04945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CHPS25_RS04945	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS04945	PWY-6728	methylaspartate cycle
CHPS25_RS04945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS04945	PWY-7254	TCA cycle VII (acetate-producers)
CHPS25_RS04945	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CHPS25_RS04950	PWY-3781	aerobic respiration I (cytochrome c)
CHPS25_RS04950	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CHPS25_RS04950	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CHPS25_RS04950	PWY-5690	TCA cycle II (plants and fungi)
CHPS25_RS04950	PWY-6728	methylaspartate cycle
CHPS25_RS04950	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CHPS25_RS04950	PWY-7254	TCA cycle VII (acetate-producers)
CHPS25_RS04950	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CHPS25_RS05105	PWY-5199	factor 420 polyglutamylation
CHPS25_RS05110	PWY-3841	folate transformations II
CHPS25_RS05110	PWY-6614	tetrahydrofolate biosynthesis
CHPS25_RS05115	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CHPS25_RS05115	PWY-6148	tetrahydromethanopterin biosynthesis
CHPS25_RS05115	PWY-6614	tetrahydrofolate biosynthesis
CHPS25_RS05115	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CHPS25_RS05115	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CHPS25_RS05115	PWY-7852	CHPS25_RS05115
CHPS25_RS05115	PWY-7853	CHPS25_RS05115
CHPS25_RS05120	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CHPS25_RS05120	PWY-6148	tetrahydromethanopterin biosynthesis
CHPS25_RS05120	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CHPS25_RS05120	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CHPS25_RS05180	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CHPS25_RS05180	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CHPS25_RS05180	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CHPS25_RS05180	PWY-6936	seleno-amino acid biosynthesis
CHPS25_RS05180	PWY-702	L-methionine biosynthesis II
