B599_RS00005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS00005	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
B599_RS00030	PWY-5913	TCA cycle VI (obligate autotrophs)
B599_RS00030	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
B599_RS00030	PWY-6638	sulfolactate degradation III
B599_RS00030	PWY-6642	(<i>R</i>)-cysteate degradation
B599_RS00030	PWY-6643	coenzyme M biosynthesis II
B599_RS00030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
B599_RS00030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
B599_RS00030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
B599_RS00110	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
B599_RS00110	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
B599_RS00150	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS00185	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS00295	PWY-6823	molybdenum cofactor biosynthesis
B599_RS00295	PWY-6891	thiazole biosynthesis II (Bacillus)
B599_RS00295	PWY-6892	thiazole biosynthesis I (E. coli)
B599_RS00295	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
B599_RS00335	PWY-1042	glycolysis IV (plant cytosol)
B599_RS00335	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS00335	PWY-6886	1-butanol autotrophic biosynthesis
B599_RS00335	PWY-6901	superpathway of glucose and xylose degradation
B599_RS00335	PWY-7003	glycerol degradation to butanol
B599_RS00355	PWY-6825	phosphatidylcholine biosynthesis V
B599_RS00425	PWY-6004	glycine betaine biosynthesis V (from glycine)
B599_RS00465	PWY-2201	folate transformations I
B599_RS00465	PWY-5497	purine nucleobases degradation II (anaerobic)
B599_RS00470	PWY-5971	palmitate biosynthesis II (bacteria and plants)
B599_RS00470	PWY-5973	<i>cis</i>-vaccenate biosynthesis
B599_RS00470	PWY-5989	stearate biosynthesis II (bacteria and plants)
B599_RS00470	PWY-5994	palmitate biosynthesis I (animals and fungi)
B599_RS00470	PWY-6113	superpathway of mycolate biosynthesis
B599_RS00470	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
B599_RS00470	PWY-6519	8-amino-7-oxononanoate biosynthesis I
B599_RS00470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
B599_RS00470	PWY-7663	gondoate biosynthesis (anaerobic)
B599_RS00470	PWY-7664	oleate biosynthesis IV (anaerobic)
B599_RS00470	PWYG-321	mycolate biosynthesis
B599_RS00605	PWY-1042	glycolysis IV (plant cytosol)
B599_RS00605	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS00605	PWY-6901	superpathway of glucose and xylose degradation
B599_RS00605	PWY-7003	glycerol degradation to butanol
B599_RS00635	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS00635	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
B599_RS00635	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS00635	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS00635	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
B599_RS00635	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
B599_RS00635	PWY-7205	CMP phosphorylation
B599_RS00635	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
B599_RS00635	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS00635	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS00635	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS00635	PWY-7224	purine deoxyribonucleosides salvage
B599_RS00635	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS00635	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
B599_RS00660	PWY-5269	cardiolipin biosynthesis II
B599_RS00660	PWY-5668	cardiolipin biosynthesis I
B599_RS00685	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS00695	PWY-5686	UMP biosynthesis
B599_RS00700	PWY-622	starch biosynthesis
B599_RS00710	PWY-6825	phosphatidylcholine biosynthesis V
B599_RS00860	PWY-7560	methylerythritol phosphate pathway II
B599_RS00900	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
B599_RS00900	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
B599_RS00915	PWY-7205	CMP phosphorylation
B599_RS00955	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS01020	PWY-7560	methylerythritol phosphate pathway II
B599_RS01065	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
B599_RS01065	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
B599_RS01065	PWY-6897	thiamin salvage II
B599_RS01065	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
B599_RS01065	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
B599_RS01065	PWY-7356	thiamin salvage IV (yeast)
B599_RS01065	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
B599_RS01070	PWY-6897	thiamin salvage II
B599_RS01070	PWY-7356	thiamin salvage IV (yeast)
B599_RS01070	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
B599_RS01115	PWY-6167	flavin biosynthesis II (archaea)
B599_RS01115	PWY-6168	flavin biosynthesis III (fungi)
B599_RS01115	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS01165	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS01165	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
B599_RS01170	PWY-1622	formaldehyde assimilation I (serine pathway)
B599_RS01170	PWY-181	photorespiration
B599_RS01170	PWY-2161	folate polyglutamylation
B599_RS01170	PWY-2201	folate transformations I
B599_RS01170	PWY-3661	glycine betaine degradation I
B599_RS01170	PWY-3661-1	glycine betaine degradation II (mammalian)
B599_RS01170	PWY-3841	folate transformations II
B599_RS01170	PWY-5497	purine nucleobases degradation II (anaerobic)
B599_RS01180	PWY-2941	L-lysine biosynthesis II
B599_RS01180	PWY-5097	L-lysine biosynthesis VI
B599_RS01190	PWY-5839	menaquinol-7 biosynthesis
B599_RS01190	PWY-5844	menaquinol-9 biosynthesis
B599_RS01190	PWY-5849	menaquinol-6 biosynthesis
B599_RS01190	PWY-5890	menaquinol-10 biosynthesis
B599_RS01190	PWY-5891	menaquinol-11 biosynthesis
B599_RS01190	PWY-5892	menaquinol-12 biosynthesis
B599_RS01190	PWY-5895	menaquinol-13 biosynthesis
B599_RS01195	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
B599_RS01195	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
B599_RS01200	PWY-5198	factor 420 biosynthesis
B599_RS01285	PWY-5097	L-lysine biosynthesis VI
B599_RS01335	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
B599_RS01335	PWY-6164	3-dehydroquinate biosynthesis I
B599_RS01335	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
B599_RS01375	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
B599_RS01375	PWY-622	starch biosynthesis
B599_RS01480	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
B599_RS01555	PWY-6891	thiazole biosynthesis II (Bacillus)
B599_RS01555	PWY-6892	thiazole biosynthesis I (E. coli)
B599_RS01555	PWY-7560	methylerythritol phosphate pathway II
B599_RS01575	PWY-1042	glycolysis IV (plant cytosol)
B599_RS01575	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS01575	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
B599_RS01575	PWY-7003	glycerol degradation to butanol
B599_RS01630	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
B599_RS01630	PWY-5368	dimorphecolate biosynthesis
B599_RS01630	PWY-5995	linoleate biosynthesis I (plants)
B599_RS01630	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
B599_RS01630	PWY-6803	phosphatidylcholine acyl editing
B599_RS01630	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
B599_RS01630	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
B599_RS01630	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
B599_RS01630	PWY-7470	phosphatidylcholine biosynthesis VII
B599_RS01630	PWY-7618	ricinoleate biosynthesis
B599_RS01705	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS01705	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
B599_RS01725	PWY-6749	CMP-legionaminate biosynthesis I
B599_RS01730	PWY-6854	ethylene biosynthesis III (microbes)
B599_RS01735	PWY-4381	fatty acid biosynthesis initiation I
B599_RS01735	PWY-5743	3-hydroxypropanoate cycle
B599_RS01735	PWY-5744	glyoxylate assimilation
B599_RS01735	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
B599_RS01735	PWY-6679	jadomycin biosynthesis
B599_RS01735	PWY-6722	candicidin biosynthesis
B599_RS01735	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
B599_RS01740	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS01740	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS01740	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS01740	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
B599_RS01865	PWY-2201	folate transformations I
B599_RS01910	PWY-4381	fatty acid biosynthesis initiation I
B599_RS01910	PWY-5743	3-hydroxypropanoate cycle
B599_RS01910	PWY-5744	glyoxylate assimilation
B599_RS01910	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
B599_RS01910	PWY-6679	jadomycin biosynthesis
B599_RS01910	PWY-6722	candicidin biosynthesis
B599_RS01910	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
B599_RS02010	PWY-6823	molybdenum cofactor biosynthesis
B599_RS02010	PWY-6891	thiazole biosynthesis II (Bacillus)
B599_RS02010	PWY-6892	thiazole biosynthesis I (E. coli)
B599_RS02010	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
B599_RS02030	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS02075	PWY-2201	folate transformations I
B599_RS02105	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
B599_RS02110	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
B599_RS02215	PWY-7294	xylose degradation IV
B599_RS02215	PWY-7295	L-arabinose degradation IV
B599_RS02215	PWY-7560	methylerythritol phosphate pathway II
B599_RS02250	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
B599_RS02250	PWY-2201	folate transformations I
B599_RS02250	PWY-3841	folate transformations II
B599_RS02250	PWY-5030	L-histidine degradation III
B599_RS02250	PWY-5497	purine nucleobases degradation II (anaerobic)
B599_RS02250	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
B599_RS02275	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
B599_RS02275	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
B599_RS02275	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
B599_RS02275	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
B599_RS02275	PWY-6978	plastoquinol-9 biosynthesis II
B599_RS02285	PWY-5941	glycogen degradation II (eukaryotic)
B599_RS02285	PWY-6724	starch degradation II
B599_RS02285	PWY-6737	starch degradation V
B599_RS02285	PWY-7238	sucrose biosynthesis II
B599_RS02315	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
B599_RS02315	PWY-6167	flavin biosynthesis II (archaea)
B599_RS02315	PWY-6168	flavin biosynthesis III (fungi)
B599_RS02350	PWY-6012	acyl carrier protein metabolism I
B599_RS02350	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
B599_RS02380	PWY-5941	glycogen degradation II (eukaryotic)
B599_RS02380	PWY-6731	starch degradation III
B599_RS02380	PWY-6737	starch degradation V
B599_RS02380	PWY-7238	sucrose biosynthesis II
B599_RS02425	PWY-4381	fatty acid biosynthesis initiation I
B599_RS02430	PWY-4381	fatty acid biosynthesis initiation I
B599_RS02430	PWY-6799	fatty acid biosynthesis (plant mitochondria)
B599_RS02430	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
B599_RS02435	PWY-5367	petroselinate biosynthesis
B599_RS02435	PWY-5515	L-arabinose degradation II
B599_RS02435	PWY-5525	D-glucuronate degradation I
B599_RS02435	PWY-5971	palmitate biosynthesis II (bacteria and plants)
B599_RS02435	PWY-5973	<i>cis</i>-vaccenate biosynthesis
B599_RS02435	PWY-5989	stearate biosynthesis II (bacteria and plants)
B599_RS02435	PWY-5994	palmitate biosynthesis I (animals and fungi)
B599_RS02435	PWY-6113	superpathway of mycolate biosynthesis
B599_RS02435	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
B599_RS02435	PWY-6519	8-amino-7-oxononanoate biosynthesis I
B599_RS02435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
B599_RS02435	PWY-7663	gondoate biosynthesis (anaerobic)
B599_RS02435	PWY-7664	oleate biosynthesis IV (anaerobic)
B599_RS02435	PWYG-321	mycolate biosynthesis
B599_RS02545	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS02545	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS02545	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS02545	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
B599_RS02545	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
B599_RS02545	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
B599_RS02565	PWY-7533	gliotoxin biosynthesis
B599_RS02610	PWY-5381	pyridine nucleotide cycling (plants)
B599_RS02610	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
B599_RS02610	PWY-6596	adenosine nucleotides degradation I
B599_RS02610	PWY-6606	guanosine nucleotides degradation II
B599_RS02610	PWY-6607	guanosine nucleotides degradation I
B599_RS02610	PWY-6608	guanosine nucleotides degradation III
B599_RS02610	PWY-7185	UTP and CTP dephosphorylation I
B599_RS02690	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS02710	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
B599_RS02710	PWY-6855	chitin degradation I (archaea)
B599_RS02710	PWY-6906	chitin derivatives degradation
B599_RS02715	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
B599_RS02725	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
B599_RS02725	PWY-5368	dimorphecolate biosynthesis
B599_RS02725	PWY-5995	linoleate biosynthesis I (plants)
B599_RS02725	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
B599_RS02725	PWY-6803	phosphatidylcholine acyl editing
B599_RS02725	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
B599_RS02725	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
B599_RS02725	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
B599_RS02725	PWY-7470	phosphatidylcholine biosynthesis VII
B599_RS02725	PWY-7618	ricinoleate biosynthesis
B599_RS02770	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS02770	PWY-5723	Rubisco shunt
B599_RS02865	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS02870	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
B599_RS02870	PWY-6596	adenosine nucleotides degradation I
B599_RS02870	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS02905	PWY-6700	queuosine biosynthesis
B599_RS02970	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
B599_RS03030	PWY-1042	glycolysis IV (plant cytosol)
B599_RS03030	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS03030	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS03030	PWY-7385	1,3-propanediol biosynthesis (engineered)
B599_RS03040	PWY-1042	glycolysis IV (plant cytosol)
B599_RS03040	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS03040	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS03040	PWY-7385	1,3-propanediol biosynthesis (engineered)
B599_RS03055	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
B599_RS03155	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS03170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS03170	PWY-5723	Rubisco shunt
B599_RS03250	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS03265	PWY-6829	tRNA methylation (yeast)
B599_RS03265	PWY-7285	methylwyosine biosynthesis
B599_RS03265	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
B599_RS03365	PWY-1042	glycolysis IV (plant cytosol)
B599_RS03365	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
B599_RS03365	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS03365	PWY-5723	Rubisco shunt
B599_RS03365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
B599_RS03365	PWY-6886	1-butanol autotrophic biosynthesis
B599_RS03365	PWY-6901	superpathway of glucose and xylose degradation
B599_RS03365	PWY-7003	glycerol degradation to butanol
B599_RS03365	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
B599_RS03365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
B599_RS03405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS03410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS03435	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS03435	PWY-5723	Rubisco shunt
B599_RS03540	PWY-2941	L-lysine biosynthesis II
B599_RS03540	PWY-2942	L-lysine biosynthesis III
B599_RS03540	PWY-5097	L-lysine biosynthesis VI
B599_RS03545	PWY-2941	L-lysine biosynthesis II
B599_RS03545	PWY-2942	L-lysine biosynthesis III
B599_RS03545	PWY-5097	L-lysine biosynthesis VI
B599_RS03545	PWY-6559	spermidine biosynthesis II
B599_RS03545	PWY-6562	norspermidine biosynthesis
B599_RS03545	PWY-7153	grixazone biosynthesis
B599_RS03550	PWY-2941	L-lysine biosynthesis II
B599_RS03550	PWY-2942	L-lysine biosynthesis III
B599_RS03550	PWY-5097	L-lysine biosynthesis VI
B599_RS03550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
B599_RS03550	PWY-6559	spermidine biosynthesis II
B599_RS03550	PWY-6562	norspermidine biosynthesis
B599_RS03550	PWY-7153	grixazone biosynthesis
B599_RS03550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
B599_RS03555	PWY-2941	L-lysine biosynthesis II
B599_RS03555	PWY-2942	L-lysine biosynthesis III
B599_RS03555	PWY-5097	L-lysine biosynthesis VI
B599_RS03580	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
B599_RS03590	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
B599_RS03605	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
B599_RS03610	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
B599_RS03615	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
B599_RS03620	PWY-6164	3-dehydroquinate biosynthesis I
B599_RS03625	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
B599_RS03625	PWY-6416	quinate degradation II
B599_RS03625	PWY-6707	gallate biosynthesis
B599_RS03640	PWY-40	putrescine biosynthesis I
B599_RS03640	PWY-43	putrescine biosynthesis II
B599_RS03640	PWY-6305	putrescine biosynthesis IV
B599_RS03640	PWY-6834	spermidine biosynthesis III
B599_RS03660	PWY-1622	formaldehyde assimilation I (serine pathway)
B599_RS03660	PWY-5392	reductive TCA cycle II
B599_RS03660	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
B599_RS03660	PWY-5690	TCA cycle II (plants and fungi)
B599_RS03660	PWY-5913	TCA cycle VI (obligate autotrophs)
B599_RS03660	PWY-6728	methylaspartate cycle
B599_RS03660	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS03660	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
B599_RS03660	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
B599_RS03670	PWY-3801	sucrose degradation II (sucrose synthase)
B599_RS03670	PWY-5054	sorbitol biosynthesis I
B599_RS03670	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
B599_RS03670	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
B599_RS03670	PWY-5659	GDP-mannose biosynthesis
B599_RS03670	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
B599_RS03670	PWY-621	sucrose degradation III (sucrose invertase)
B599_RS03670	PWY-622	starch biosynthesis
B599_RS03670	PWY-6981	chitin biosynthesis
B599_RS03670	PWY-6992	1,5-anhydrofructose degradation
B599_RS03670	PWY-7238	sucrose biosynthesis II
B599_RS03670	PWY-7347	sucrose biosynthesis III
B599_RS03670	PWY-7385	1,3-propanediol biosynthesis (engineered)
B599_RS03735	PWY-5392	reductive TCA cycle II
B599_RS03735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
B599_RS03735	PWY-5690	TCA cycle II (plants and fungi)
B599_RS03735	PWY-5913	TCA cycle VI (obligate autotrophs)
B599_RS03735	PWY-6728	methylaspartate cycle
B599_RS03735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS03735	PWY-7254	TCA cycle VII (acetate-producers)
B599_RS03735	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
B599_RS03865	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
B599_RS03865	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
B599_RS03880	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS03880	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS03880	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
B599_RS03880	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
B599_RS03880	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS03880	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS03880	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS03880	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
B599_RS03885	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS03885	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS03885	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
B599_RS03885	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
B599_RS03885	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS03885	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
B599_RS03885	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
B599_RS03885	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
B599_RS03915	PWY-5392	reductive TCA cycle II
B599_RS03915	PWY-5537	pyruvate fermentation to acetate V
B599_RS03915	PWY-5538	pyruvate fermentation to acetate VI
B599_RS03915	PWY-5690	TCA cycle II (plants and fungi)
B599_RS03915	PWY-5913	TCA cycle VI (obligate autotrophs)
B599_RS03915	PWY-6728	methylaspartate cycle
B599_RS03915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS03915	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
B599_RS03920	PWY-5392	reductive TCA cycle II
B599_RS03920	PWY-5537	pyruvate fermentation to acetate V
B599_RS03920	PWY-5538	pyruvate fermentation to acetate VI
B599_RS03920	PWY-5690	TCA cycle II (plants and fungi)
B599_RS03920	PWY-5913	TCA cycle VI (obligate autotrophs)
B599_RS03920	PWY-6728	methylaspartate cycle
B599_RS03920	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS03920	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
B599_RS03940	PWY-6749	CMP-legionaminate biosynthesis I
B599_RS03945	PWY-6749	CMP-legionaminate biosynthesis I
B599_RS03955	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
B599_RS03955	PWY-622	starch biosynthesis
B599_RS04040	PWY-5667	CDP-diacylglycerol biosynthesis I
B599_RS04040	PWY-6453	stigma estolide biosynthesis
B599_RS04040	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
B599_RS04040	PWY-7587	oleate biosynthesis III (cyanobacteria)
B599_RS04060	PWY-7560	methylerythritol phosphate pathway II
B599_RS04080	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
B599_RS04095	PWY-622	starch biosynthesis
B599_RS04100	PWY-5269	cardiolipin biosynthesis II
B599_RS04100	PWY-5668	cardiolipin biosynthesis I
B599_RS04260	PWY-5198	factor 420 biosynthesis
B599_RS04260	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
B599_RS04260	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
B599_RS04265	PWY-2781	<i>cis</i>-zeatin biosynthesis
B599_RS04290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
B599_RS04290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
B599_RS04295	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
B599_RS04295	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
B599_RS04295	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
B599_RS04295	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
B599_RS04310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
B599_RS04310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
B599_RS04315	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
B599_RS04315	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
B599_RS04315	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
B599_RS04320	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
B599_RS04320	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
B599_RS04320	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
B599_RS04325	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
B599_RS04325	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
B599_RS04360	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
B599_RS04360	PWY-5723	Rubisco shunt
B599_RS04360	PWY-6891	thiazole biosynthesis II (Bacillus)
B599_RS04360	PWY-6892	thiazole biosynthesis I (E. coli)
B599_RS04360	PWY-6901	superpathway of glucose and xylose degradation
B599_RS04360	PWY-7560	methylerythritol phosphate pathway II
B599_RS04375	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
B599_RS04375	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
B599_RS04385	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
B599_RS04480	PWY-6167	flavin biosynthesis II (archaea)
B599_RS04480	PWY-6168	flavin biosynthesis III (fungi)
B599_RS04485	PWY-6167	flavin biosynthesis II (archaea)
B599_RS04485	PWY-6168	flavin biosynthesis III (fungi)
B599_RS04485	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
B599_RS04490	PWY-5525	D-glucuronate degradation I
B599_RS04495	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
B599_RS04530	PWY-1622	formaldehyde assimilation I (serine pathway)
B599_RS04530	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS04560	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
B599_RS04575	PWY-5667	CDP-diacylglycerol biosynthesis I
B599_RS04575	PWY-5981	CDP-diacylglycerol biosynthesis III
B599_RS04655	PWY-5669	phosphatidylethanolamine biosynthesis I
B599_RS04685	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
B599_RS04685	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
B599_RS04690	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
B599_RS04690	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
B599_RS04845	PWY-1042	glycolysis IV (plant cytosol)
B599_RS04845	PWY-1622	formaldehyde assimilation I (serine pathway)
B599_RS04845	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
B599_RS04845	PWY-5484	glycolysis II (from fructose 6-phosphate)
B599_RS04845	PWY-5723	Rubisco shunt
B599_RS04845	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
B599_RS04845	PWY-6886	1-butanol autotrophic biosynthesis
B599_RS04845	PWY-6901	superpathway of glucose and xylose degradation
B599_RS04845	PWY-7003	glycerol degradation to butanol
B599_RS04845	PWY-7124	ethylene biosynthesis V (engineered)
B599_RS04845	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
B599_RS04870	PWY-3781	aerobic respiration I (cytochrome c)
B599_RS04870	PWY-4302	aerobic respiration III (alternative oxidase pathway)
B599_RS04870	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
B599_RS04870	PWY-5690	TCA cycle II (plants and fungi)
B599_RS04870	PWY-6728	methylaspartate cycle
B599_RS04870	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS04870	PWY-7254	TCA cycle VII (acetate-producers)
B599_RS04870	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
B599_RS04875	PWY-3781	aerobic respiration I (cytochrome c)
B599_RS04875	PWY-4302	aerobic respiration III (alternative oxidase pathway)
B599_RS04875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
B599_RS04875	PWY-5690	TCA cycle II (plants and fungi)
B599_RS04875	PWY-6728	methylaspartate cycle
B599_RS04875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
B599_RS04875	PWY-7254	TCA cycle VII (acetate-producers)
B599_RS04875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
B599_RS04950	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
B599_RS05030	PWY-5199	factor 420 polyglutamylation
B599_RS05035	PWY-3841	folate transformations II
B599_RS05035	PWY-6614	tetrahydrofolate biosynthesis
B599_RS05040	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
B599_RS05040	PWY-6148	tetrahydromethanopterin biosynthesis
B599_RS05040	PWY-6614	tetrahydrofolate biosynthesis
B599_RS05040	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
B599_RS05040	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
B599_RS05045	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
B599_RS05045	PWY-6148	tetrahydromethanopterin biosynthesis
B599_RS05045	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
B599_RS05045	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
B599_RS05105	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
B599_RS05105	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
B599_RS05105	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
B599_RS05105	PWY-6936	seleno-amino acid biosynthesis
B599_RS05105	PWY-702	L-methionine biosynthesis II
B599_RS05115	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
B599_RS05115	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
