A6E29_RS00025	SM00845	GatB domain
A6E29_RS00080	SM00670	Large family of predicted nucleotide-binding domains
A6E29_RS00090	SM00287	Bacterial SH3 domain homologues
A6E29_RS00125	SM00937	A6E29_RS00125
A6E29_RS00135	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00135	SM00962	SRP54-type protein, GTPase domain
A6E29_RS00135	SM00963	SRP54-type protein, helical bundle domain
A6E29_RS00160	SM00072	Guanylate kinase homologues.
A6E29_RS00175	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00220	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00230	SM00642	Alpha-amylase domain
A6E29_RS00280	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E29_RS00290	SM00861	Transketolase, pyrimidine binding domain
A6E29_RS00310	SM00506	Appr-1"-p processing enzyme
A6E29_RS00335	SM00363	S4 RNA-binding domain
A6E29_RS00340	SM01350	A6E29_RS00340
A6E29_RS00365	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00370	SM00529	Helix-turn-helix diphteria tox regulatory element
A6E29_RS00400	SM00480	DNA polymerase III beta subunit
A6E29_RS00445	SM00155	Phospholipase D. Active site motifs.
A6E29_RS00490	SM00904	Riboflavin kinase
A6E29_RS00510	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E29_RS00510	SM00322	K homology RNA-binding domain
A6E29_RS00515	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E29_RS00555	SM00363	S4 RNA-binding domain
A6E29_RS00560	SM00478	endonuclease III
A6E29_RS00560	SM00525	A6E29_RS00560
A6E29_RS00580	SM00883	Chaperonin 10 Kd subunit
A6E29_RS00590	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00590	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E29_RS00635	SM00841	Elongation factor P, C-terminal
A6E29_RS00635	SM01185	A6E29_RS00635
A6E29_RS00645	SM00878	Biotin carboxylase C-terminal domain
A6E29_RS00675	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00760	SM00220	Serine/Threonine protein kinases, catalytic domain
A6E29_RS00765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6E29_RS00765	SM00292	breast cancer carboxy-terminal domain
A6E29_RS00765	SM00532	Ligase N family
A6E29_RS00795	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00800	SM00457	membrane-attack complex / perforin
A6E29_RS00800	SM00472	Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
A6E29_RS00805	SM00155	Phospholipase D. Active site motifs.
A6E29_RS00810	SM00155	Phospholipase D. Active site motifs.
A6E29_RS00815	SM00155	Phospholipase D. Active site motifs.
A6E29_RS00820	SM00155	Phospholipase D. Active site motifs.
A6E29_RS00935	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS00965	SM00732	Likely ribonuclease with RNase H fold.
A6E29_RS00990	SM00434	DNA Topoisomerase IV
A6E29_RS00995	SM00387	Histidine kinase-like ATPases
A6E29_RS00995	SM00433	TopoisomeraseII
A6E29_RS01015	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E29_RS01015	SM00924	MgtE intracellular N domain
A6E29_RS01050	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01055	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01130	SM01133	A6E29_RS01130
A6E29_RS01245	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E29_RS01255	SM00822	A6E29_RS01255
A6E29_RS01260	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6E29_RS01270	SM00493	A6E29_RS01270
A6E29_RS01280	SM00935	Outer membrane protein (OmpH-like)
A6E29_RS01300	SM00861	Transketolase, pyrimidine binding domain
A6E29_RS01320	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01320	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6E29_RS01355	SM01091	Transporter associated domain
A6E29_RS01360	SM01091	Transporter associated domain
A6E29_RS01370	SM00331	Sigma factor PP2C-like phosphatases
A6E29_RS01370	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6E29_RS01380	SM00479	A6E29_RS01380
A6E29_RS01395	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01410	SM00411	bacterial (prokaryotic) histone like domain
A6E29_RS01415	SM00646	A6E29_RS01415
A6E29_RS01450	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01450	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6E29_RS01470	SM00900	A6E29_RS01470
A6E29_RS01495	SM00155	Phospholipase D. Active site motifs.
A6E29_RS01505	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01505	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E29_RS01560	SM00358	Double-stranded RNA binding motif
A6E29_RS01560	SM00535	Ribonuclease III family
A6E29_RS01565	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01580	SM00220	Serine/Threonine protein kinases, catalytic domain
A6E29_RS01645	SM00663	RNA polymerase I subunit A N-terminus
A6E29_RS01670	SM00649	Ribosomal protein L11/L12
A6E29_RS01675	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6E29_RS01675	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6E29_RS01700	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E29_RS01770	SM00861	Transketolase, pyrimidine binding domain
A6E29_RS01785	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01820	SM00861	Transketolase, pyrimidine binding domain
A6E29_RS01825	SM00271	DnaJ molecular chaperone homology domain
A6E29_RS01840	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01840	SM00464	Found in ATP-dependent protease La (LON)
A6E29_RS01860	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS01890	SM00650	Ribosomal RNA adenine dimethylases
A6E29_RS01935	SM01130	A6E29_RS01935
A6E29_RS01945	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6E29_RS02030	SM00849	Metallo-beta-lactamase superfamily
A6E29_RS02035	SM00062	Bacterial periplasmic substrate-binding proteins
A6E29_RS02075	SM01152	A6E29_RS02075
A6E29_RS02120	SM00357	Cold shock protein domain
A6E29_RS02120	SM00955	A6E29_RS02120
A6E29_RS02155	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6E29_RS02195	SM01259	A6E29_RS02195
A6E29_RS02205	SM00710	Parallel beta-helix repeats
A6E29_RS02205	SM00869	Autotransporter beta-domain
A6E29_RS02210	SM00869	Autotransporter beta-domain
A6E29_RS02225	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS02275	SM01091	Transporter associated domain
A6E29_RS02340	SM01403	A6E29_RS02340
A6E29_RS02345	SM00838	Elongation factor G C-terminus
A6E29_RS02345	SM00889	Elongation factor G, domain IV
A6E29_RS02365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E29_RS02365	SM00245	tail specific protease
A6E29_RS02435	SM00563	Phosphate acyltransferases
A6E29_RS02440	SM00836	DALR anticodon binding domain
A6E29_RS02440	SM01016	Arginyl tRNA synthetase N terminal dom
A6E29_RS02465	SM00937	A6E29_RS02465
A6E29_RS02470	SM00151	SWI complex, BAF60b domains
A6E29_RS02510	SM00091	PAS domain
A6E29_RS02510	SM00387	Histidine kinase-like ATPases
A6E29_RS02510	SM00388	His Kinase A (phosphoacceptor) domain
A6E29_RS02515	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS02515	SM00448	cheY-homologous receiver domain
A6E29_RS02565	SM00873	B3/4 domain
A6E29_RS02565	SM00874	tRNA synthetase B5 domain
A6E29_RS02565	SM00896	Ferredoxin-fold anticodon binding domain
A6E29_RS02625	SM00062	Bacterial periplasmic substrate-binding proteins
A6E29_RS02650	SM00357	Cold shock protein domain
A6E29_RS02650	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS02650	SM00959	Rho termination factor, N-terminal domain
A6E29_RS02660	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6E29_RS02660	SM00474	3'-5' exonuclease
A6E29_RS02660	SM00475	5'-3' exonuclease
A6E29_RS02660	SM00482	DNA polymerase A domain
A6E29_RS02695	SM01228	A6E29_RS02695
A6E29_RS02705	SM00562	A6E29_RS02705
A6E29_RS02710	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6E29_RS02735	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6E29_RS02745	SM00662	RNA polymerases D
A6E29_RS02795	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6E29_RS02800	SM01374	A6E29_RS02800
A6E29_RS02820	SM00322	K homology RNA-binding domain
A6E29_RS02835	SM01382	A6E29_RS02835
A6E29_RS02835	SM01383	A6E29_RS02835
A6E29_RS02890	SM00479	A6E29_RS02890
A6E29_RS02945	SM00481	DNA polymerase alpha chain like domain
A6E29_RS02955	SM00028	Tetratricopeptide repeats
A6E29_RS03000	SM00487	DEAD-like helicases superfamily
A6E29_RS03000	SM00490	helicase superfamily c-terminal domain
A6E29_RS03015	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E29_RS03105	SM00853	MutL C terminal dimerisation domain
A6E29_RS03105	SM01340	A6E29_RS03105
A6E29_RS03140	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6E29_RS03165	SM00487	DEAD-like helicases superfamily
A6E29_RS03165	SM00490	helicase superfamily c-terminal domain
A6E29_RS03170	SM01192	A6E29_RS03170
A6E29_RS03170	SM01193	A6E29_RS03170
A6E29_RS03175	SM00331	Sigma factor PP2C-like phosphatases
A6E29_RS03180	SM00331	Sigma factor PP2C-like phosphatases
A6E29_RS03245	SM00257	Lysin motif
A6E29_RS03285	SM00986	Uracil DNA glycosylase superfamily
A6E29_RS03285	SM00987	UreE urease accessory protein, C-terminal domain 
A6E29_RS03300	SM01236	A6E29_RS03300
A6E29_RS03320	SM00905	Dihydroneopterin aldolase
A6E29_RS03375	SM00518	AP endonuclease family 2
A6E29_RS03380	SM00363	S4 RNA-binding domain
A6E29_RS03380	SM01390	A6E29_RS03380
A6E29_RS03385	SM00450	Rhodanese Homology Domain
A6E29_RS03400	SM00862	Transcriptional regulatory protein, C terminal
A6E29_RS03420	SM01004	Delta-aminolevulinic acid dehydratase
A6E29_RS03475	SM00151	SWI complex, BAF60b domains
A6E29_RS03475	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6E29_RS03475	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6E29_RS03475	SM00493	A6E29_RS03475
A6E29_RS03510	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03530	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03560	SM00363	S4 RNA-binding domain
A6E29_RS03570	SM00434	DNA Topoisomerase IV
A6E29_RS03575	SM00387	Histidine kinase-like ATPases
A6E29_RS03575	SM00433	TopoisomeraseII
A6E29_RS03590	SM00240	Forkhead associated domain
A6E29_RS03615	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03635	SM00220	Serine/Threonine protein kinases, catalytic domain
A6E29_RS03705	SM00028	Tetratricopeptide repeats
A6E29_RS03715	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03730	SM00470	ParB-like nuclease domain
A6E29_RS03735	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03740	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03775	SM00478	endonuclease III
A6E29_RS03790	SM00028	Tetratricopeptide repeats
A6E29_RS03795	SM00957	SecA DEAD-like domain
A6E29_RS03795	SM00958	SecA preprotein cross-linking domain
A6E29_RS03815	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03815	SM00994	ClpX C4-type zinc finger
A6E29_RS03815	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E29_RS03840	SM00487	DEAD-like helicases superfamily
A6E29_RS03840	SM00490	helicase superfamily c-terminal domain
A6E29_RS03910	SM00855	Phosphoglycerate mutase family
A6E29_RS03915	SM00363	S4 RNA-binding domain
A6E29_RS03985	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
A6E29_RS03990	SM00849	Metallo-beta-lactamase superfamily
A6E29_RS03995	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS03995	SM00843	A6E29_RS03995
A6E29_RS04030	SM01323	A6E29_RS04030
A6E29_RS04055	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E29_RS04065	SM00487	DEAD-like helicases superfamily
A6E29_RS04065	SM00490	helicase superfamily c-terminal domain
A6E29_RS04065	SM00982	A6E29_RS04065
A6E29_RS04065	SM01058	CarD-like/TRCF domain
A6E29_RS04070	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6E29_RS04095	SM00861	Transketolase, pyrimidine binding domain
A6E29_RS04105	SM00841	Elongation factor P, C-terminal
A6E29_RS04105	SM01185	A6E29_RS04105
A6E29_RS04145	SM00257	Lysin motif
A6E29_RS04200	SM00825	Beta-ketoacyl synthase
A6E29_RS04220	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6E29_RS04230	SM00563	Phosphate acyltransferases
A6E29_RS04245	SM00487	DEAD-like helicases superfamily
A6E29_RS04245	SM00490	helicase superfamily c-terminal domain
A6E29_RS04265	SM00840	A6E29_RS04265
A6E29_RS04310	SM00465	GIY-YIG type nucleases (URI domain)
A6E29_RS04315	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6E29_RS04315	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6E29_RS04325	SM00400	zinc finger
A6E29_RS04325	SM00493	A6E29_RS04325
A6E29_RS04410	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E29_RS04435	SM00869	Autotransporter beta-domain
A6E29_RS04480	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS04480	SM00962	SRP54-type protein, GTPase domain
A6E29_RS04490	SM00881	CoA binding domain
A6E29_RS04495	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E29_RS04500	SM01264	A6E29_RS04500
A6E29_RS04595	SM00382	ATPases associated with a variety of cellular activities
A6E29_RS04600	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E29_RS04600	SM00322	K homology RNA-binding domain
A6E29_RS04605	SM01387	A6E29_RS04605
A6E29_RS04695	SM00245	tail specific protease
A6E29_RS04745	SM00642	Alpha-amylase domain
A6E29_RS04760	SM00869	Autotransporter beta-domain
A6E29_RS04765	SM00869	Autotransporter beta-domain
A6E29_RS04770	SM00869	Autotransporter beta-domain
A6E29_RS04775	SM00869	Autotransporter beta-domain
A6E29_RS04785	SM00869	Autotransporter beta-domain
