locus-tag class description BKB96_RS00015 PF02686 Glu-tRNAGln amidotransferase C subunit BKB96_RS00020 PF01425 Amidase BKB96_RS00025 PF02934 GatB/GatE catalytic domain BKB96_RS00025 PF02637 GatB domain BKB96_RS00030 PF17461 Family of unknown function (DUF5423) BKB96_RS00035 PF17459 Family of unknown function (DUF5422) BKB96_RS00045 PF11858 Domain of unknown function (DUF3378) BKB96_RS00045 PF01351 Ribonuclease HII BKB96_RS00055 PF03279 Bacterial lipid A biosynthesis acyltransferase BKB96_RS00065 PF02457 DisA bacterial checkpoint controller nucleotide-binding BKB96_RS00070 PF01654 Cytochrome bd terminal oxidase subunit I BKB96_RS00075 PF02322 Cytochrome bd terminal oxidase subunit II BKB96_RS00080 PF13638 PIN domain BKB96_RS00080 PF02562 PhoH-like protein BKB96_RS00105 PF00133 tRNA synthetases class I (I, L, M and V) BKB96_RS00105 PF08264 Anticodon-binding domain of tRNA BKB96_RS00110 PF10502 Signal peptidase, peptidase S26 BKB96_RS00120 PF01197 Ribosomal protein L31 BKB96_RS00125 PF03462 PCRF domain BKB96_RS00125 PF00472 RF-1 domain BKB96_RS00130 PF05175 Methyltransferase small domain BKB96_RS00130 PF17827 PrmC N-terminal domain BKB96_RS00135 PF02881 SRP54-type protein, helical bundle domain BKB96_RS00135 PF00448 SRP54-type protein, GTPase domain BKB96_RS00135 PF02978 Signal peptide binding domain BKB96_RS00140 PF00886 Ribosomal protein S16 BKB96_RS00145 PF01746 tRNA (Guanine-1)-methyltransferase BKB96_RS00150 PF01245 Ribosomal protein L19 BKB96_RS00155 PF01351 Ribonuclease HII BKB96_RS00160 PF00625 Guanylate kinase BKB96_RS00170 PF08264 Anticodon-binding domain of tRNA BKB96_RS00170 PF09334 tRNA synthetases class I (M) BKB96_RS00175 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BKB96_RS00175 PF14490 Helix-hairpin-helix containing domain BKB96_RS00175 PF13538 UvrD-like helicase C-terminal domain BKB96_RS00185 PF09825 Biotin-protein ligase, N terminal BKB96_RS00210 PF00692 dUTPase BKB96_RS00220 PF05491 RuvB C-terminal winged helix domain BKB96_RS00220 PF05496 Holliday junction DNA helicase RuvB P-loop domain BKB96_RS00220 PF17864 RuvB AAA lid domain BKB96_RS00225 PF08486 Stage II sporulation protein BKB96_RS00230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKB96_RS00230 PF00128 Alpha amylase, catalytic domain BKB96_RS00240 PF00436 Single-strand binding protein family BKB96_RS00245 PF00883 Cytosol aminopeptidase family, catalytic domain BKB96_RS00245 PF02789 Cytosol aminopeptidase family, N-terminal domain BKB96_RS00250 PF07382 Histone H1-like nucleoprotein HC2 BKB96_RS00260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKB96_RS00280 PF04055 Radical SAM superfamily BKB96_RS00280 PF06969 HemN C-terminal domain BKB96_RS00290 PF16870 2-oxoglutarate dehydrogenase C-terminal BKB96_RS00290 PF16078 2-oxoglutarate dehydrogenase N-terminus BKB96_RS00290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKB96_RS00290 PF00676 Dehydrogenase E1 component BKB96_RS00290 PF02779 Transketolase, pyrimidine binding domain BKB96_RS00295 PF00364 Biotin-requiring enzyme BKB96_RS00295 PF02817 e3 binding domain BKB96_RS00295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKB96_RS00305 PF04551 GcpE protein BKB96_RS00315 PF00111 2Fe-2S iron-sulfur cluster binding domain BKB96_RS00325 PF00771 FHIPEP family BKB96_RS00330 PF04539 Sigma-70 region 3 BKB96_RS00330 PF04542 Sigma-70 region 2 BKB96_RS00330 PF04545 Sigma-70, region 4 BKB96_RS00335 PF00579 tRNA synthetases class I (W and Y) BKB96_RS00335 PF01479 S4 domain BKB96_RS00340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKB96_RS00340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKB96_RS00345 PF06421 GTP-binding protein LepA C-terminus BKB96_RS00345 PF00009 Elongation factor Tu GTP binding domain BKB96_RS00345 PF00679 Elongation factor G C-terminus BKB96_RS00345 PF03144 Elongation factor Tu domain 2 BKB96_RS00350 PF03219 TLC ATP/ADP transporter BKB96_RS00365 PF01297 Zinc-uptake complex component A periplasmic BKB96_RS00370 PF00005 ABC transporter BKB96_RS00375 PF00950 ABC 3 transport family BKB96_RS00375 PF02742 Iron dependent repressor, metal binding and dimerisation domain BKB96_RS00380 PF00950 ABC 3 transport family BKB96_RS00385 PF13288 DXP reductoisomerase C-terminal domain BKB96_RS00385 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BKB96_RS00385 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BKB96_RS00390 PF02163 Peptidase family M50 BKB96_RS00400 PF02463 RecF/RecN/SMC N terminal domain BKB96_RS00405 PF02768 DNA polymerase III beta subunit, C-terminal domain BKB96_RS00405 PF02767 DNA polymerase III beta subunit, central domain BKB96_RS00405 PF00712 DNA polymerase III beta subunit, N-terminal domain BKB96_RS00410 PF01668 SmpB protein BKB96_RS00415 PF02424 ApbE family BKB96_RS00420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKB96_RS00420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKB96_RS00430 PF17455 Late transcription unit B BKB96_RS00455 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BKB96_RS00460 PF00830 Ribosomal L28 family BKB96_RS00465 PF02446 4-alpha-glucanotransferase BKB96_RS00480 PF00771 FHIPEP family BKB96_RS00485 PF01312 FlhB HrpN YscU SpaS Family BKB96_RS00490 PF01926 50S ribosome-binding GTPase BKB96_RS00490 PF06071 Protein of unknown function (DUF933) BKB96_RS00495 PF06574 FAD synthetase BKB96_RS00495 PF01687 Riboflavin kinase BKB96_RS00500 PF01509 TruB family pseudouridylate synthase (N terminal domain) BKB96_RS00500 PF16198 tRNA pseudouridylate synthase B C-terminal domain BKB96_RS00505 PF02033 Ribosome-binding factor A BKB96_RS00510 PF11987 Translation-initiation factor 2 BKB96_RS00510 PF00009 Elongation factor Tu GTP binding domain BKB96_RS00510 PF04760 Translation initiation factor IF-2, N-terminal region BKB96_RS00515 PF00575 S1 RNA binding domain BKB96_RS00515 PF13184 NusA-like KH domain BKB96_RS00515 PF08529 NusA N-terminal domain BKB96_RS00520 PF00575 S1 RNA binding domain BKB96_RS00525 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKB96_RS00530 PF01648 4'-phosphopantetheinyl transferase superfamily BKB96_RS00560 PF00849 RNA pseudouridylate synthase BKB96_RS00565 PF00730 HhH-GPD superfamily base excision DNA repair protein BKB96_RS00565 PF14815 NUDIX domain BKB96_RS00565 PF00633 Helix-hairpin-helix motif BKB96_RS00570 PF01784 NIF3 (NGG1p interacting factor 3) BKB96_RS00580 PF00118 TCP-1/cpn60 chaperonin family BKB96_RS00585 PF00166 Chaperonin 10 Kd subunit BKB96_RS00590 PF01432 Peptidase family M3 BKB96_RS00590 PF08439 Oligopeptidase F BKB96_RS00595 PF07724 AAA domain (Cdc48 subfamily) BKB96_RS00595 PF00004 ATPase family associated with various cellular activities (AAA) BKB96_RS00595 PF10431 C-terminal, D2-small domain, of ClpB protein BKB96_RS00595 PF02861 Clp amino terminal domain, pathogenicity island component BKB96_RS00595 PF17871 AAA lid domain BKB96_RS00605 PF17628 Inclusion membrane protein D BKB96_RS00610 PF17627 Inclusion membrane protein E BKB96_RS00615 PF17626 Inclusion membrane protein F BKB96_RS00635 PF00834 Ribulose-phosphate 3 epimerase family BKB96_RS00640 PF08207 Elongation factor P (EF-P) KOW-like domain BKB96_RS00640 PF09285 Elongation factor P, C-terminal BKB96_RS00640 PF01132 Elongation factor P (EF-P) OB domain BKB96_RS00645 PF00364 Biotin-requiring enzyme BKB96_RS00650 PF00289 Biotin carboxylase, N-terminal domain BKB96_RS00650 PF02785 Biotin carboxylase C-terminal domain BKB96_RS00650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKB96_RS00655 PF00572 Ribosomal protein L13 BKB96_RS00660 PF00380 Ribosomal protein S9/S16 BKB96_RS00675 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS00680 PF00005 ABC transporter BKB96_RS00715 PF01300 Telomere recombination BKB96_RS00725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKB96_RS00735 PF02810 SEC-C motif BKB96_RS00735 PF03695 Uncharacterised protein family (UPF0149) BKB96_RS00765 PF00069 Protein kinase domain BKB96_RS00765 PF03781 Sulfatase-modifying factor enzyme 1 BKB96_RS00770 PF00533 BRCA1 C Terminus (BRCT) domain BKB96_RS00770 PF01653 NAD-dependent DNA ligase adenylation domain BKB96_RS00770 PF03120 NAD-dependent DNA ligase OB-fold domain BKB96_RS00770 PF12826 Helix-hairpin-helix motif BKB96_RS00780 PF01494 FAD binding domain BKB96_RS00790 PF00471 Ribosomal protein L33 BKB96_RS00800 PF00005 ABC transporter BKB96_RS00870 PF01371 Trp repressor protein BKB96_RS00880 PF00291 Pyridoxal-phosphate dependent enzyme BKB96_RS00885 PF00290 Tryptophan synthase alpha chain BKB96_RS00910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKB96_RS00915 PF02600 Disulfide bond formation protein DsbB BKB96_RS00935 PF00005 ABC transporter BKB96_RS00955 PF02348 Cytidylyltransferase BKB96_RS00960 PF00117 Glutamine amidotransferase class-I BKB96_RS00960 PF06418 CTP synthase N-terminus BKB96_RS00965 PF03652 Holliday junction resolvase BKB96_RS00970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BKB96_RS00970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BKB96_RS00975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKB96_RS00980 PF12169 DNA polymerase III subunits gamma and tau domain III BKB96_RS00985 PF02223 Thymidylate kinase BKB96_RS00990 PF03989 DNA gyrase C-terminal domain, beta-propeller BKB96_RS00990 PF00521 DNA gyrase/topoisomerase IV, subunit A BKB96_RS00995 PF00204 DNA gyrase B BKB96_RS00995 PF00986 DNA gyrase B subunit, carboxyl terminus BKB96_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKB96_RS00995 PF01751 Toprim domain BKB96_RS01010 PF01702 Queuine tRNA-ribosyltransferase BKB96_RS01015 PF01769 Divalent cation transporter BKB96_RS01015 PF03448 MgtE intracellular N domain BKB96_RS01015 PF00571 CBS domain BKB96_RS01030 PF00814 Glycoprotease family BKB96_RS01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKB96_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS01045 PF12911 N-terminal TM domain of oligopeptide transport permease C BKB96_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS01050 PF00005 ABC transporter BKB96_RS01050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKB96_RS01055 PF00005 ABC transporter BKB96_RS01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKB96_RS01060 PF06685 Protein of unknown function (DUF1186) BKB96_RS01065 PF00939 Sodium:sulfate symporter transmembrane region BKB96_RS01070 PF00365 Phosphofructokinase BKB96_RS01080 PF00365 Phosphofructokinase BKB96_RS01095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BKB96_RS01100 PF13603 Leucyl-tRNA synthetase, Domain 2 BKB96_RS01100 PF09334 tRNA synthetases class I (M) BKB96_RS01100 PF08264 Anticodon-binding domain of tRNA BKB96_RS01105 PF00202 Aminotransferase class-III BKB96_RS01110 PF02622 Uncharacterized ACR, COG1678 BKB96_RS01120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BKB96_RS01130 PF01791 DeoC/LacD family aldolase BKB96_RS01135 PF13520 Amino acid permease BKB96_RS01140 PF01171 PP-loop family BKB96_RS01145 PF01975 Survival protein SurE BKB96_RS01150 PF01040 UbiA prenyltransferase family BKB96_RS01155 PF02441 Flavoprotein BKB96_RS01160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BKB96_RS01160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BKB96_RS01220 PF00375 Sodium:dicarboxylate symporter family BKB96_RS01225 PF00209 Sodium:neurotransmitter symporter family BKB96_RS01250 PF00550 Phosphopantetheine attachment site BKB96_RS01260 PF00698 Acyl transferase domain BKB96_RS01265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKB96_RS01265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKB96_RS01270 PF13662 Toprim domain BKB96_RS01275 PF01103 Surface antigen BKB96_RS01275 PF07244 Surface antigen variable number repeat BKB96_RS01280 PF03938 Outer membrane protein (OmpH-like) BKB96_RS01285 PF00132 Bacterial transferase hexapeptide (six repeats) BKB96_RS01285 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BKB96_RS01285 PF14602 Hexapeptide repeat of succinyl-transferase BKB96_RS01295 PF00676 Dehydrogenase E1 component BKB96_RS01300 PF02780 Transketolase, C-terminal domain BKB96_RS01300 PF02779 Transketolase, pyrimidine binding domain BKB96_RS01300 PF00364 Biotin-requiring enzyme BKB96_RS01305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKB96_RS01305 PF00364 Biotin-requiring enzyme BKB96_RS01305 PF02817 e3 binding domain BKB96_RS01310 PF00343 Carbohydrate phosphorylase BKB96_RS01320 PF08299 Bacterial dnaA protein helix-turn-helix BKB96_RS01320 PF00308 Bacterial dnaA protein BKB96_RS01325 PF02096 60Kd inner membrane protein BKB96_RS01330 PF01790 Prolipoprotein diacylglyceryl transferase BKB96_RS01340 PF02517 CPBP intramembrane metalloprotease BKB96_RS01355 PF00571 CBS domain BKB96_RS01355 PF03471 Transporter associated domain BKB96_RS01355 PF01595 Cyclin M transmembrane N-terminal domain BKB96_RS01365 PF00266 Aminotransferase class-V BKB96_RS01380 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKB96_RS01380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKB96_RS01380 PF14579 Helix-hairpin-helix motif BKB96_RS01380 PF11490 DNA polymerase III polC-type N-terminus II BKB96_RS01380 PF02811 PHP domain BKB96_RS01380 PF00929 Exonuclease BKB96_RS01385 PF02621 Menaquinone biosynthesis BKB96_RS01395 PF00664 ABC transporter transmembrane region BKB96_RS01395 PF00005 ABC transporter BKB96_RS01400 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BKB96_RS01410 PF00216 Bacterial DNA-binding protein BKB96_RS01415 PF08239 Bacterial SH3 domain BKB96_RS01415 PF01520 N-acetylmuramoyl-L-alanine amidase BKB96_RS01420 PF08245 Mur ligase middle domain BKB96_RS01420 PF02875 Mur ligase family, glutamate ligase domain BKB96_RS01425 PF00905 Penicillin binding protein transpeptidase domain BKB96_RS01425 PF03717 Penicillin-binding Protein dimerisation domain BKB96_RS01435 PF01795 MraW methylase family BKB96_RS01440 PF17377 Family of unknown function (DUF5399) BKB96_RS01450 PF00308 Bacterial dnaA protein BKB96_RS01450 PF08299 Bacterial dnaA protein helix-turn-helix BKB96_RS01450 PF11638 DnaA N-terminal domain BKB96_RS01465 PF03116 NQR2, RnfD, RnfE family BKB96_RS01470 PF04205 FMN-binding domain BKB96_RS01475 PF02508 Rnf-Nqr subunit, membrane protein BKB96_RS01480 PF02508 Rnf-Nqr subunit, membrane protein BKB96_RS01485 PF01597 Glycine cleavage H-protein BKB96_RS01495 PF13091 PLD-like domain BKB96_RS01505 PF02861 Clp amino terminal domain, pathogenicity island component BKB96_RS01505 PF07724 AAA domain (Cdc48 subfamily) BKB96_RS01505 PF10431 C-terminal, D2-small domain, of ClpB protein BKB96_RS01505 PF00004 ATPase family associated with various cellular activities (AAA) BKB96_RS01505 PF17871 AAA lid domain BKB96_RS01525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BKB96_RS01530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BKB96_RS01535 PF00692 dUTPase BKB96_RS01540 PF01039 Carboxyl transferase domain BKB96_RS01540 PF17848 Acetyl-coA carboxylase zinc finger domain BKB96_RS01545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKB96_RS01545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BKB96_RS01550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKB96_RS01550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKB96_RS01550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKB96_RS01550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKB96_RS01560 PF00035 Double-stranded RNA binding motif BKB96_RS01560 PF14622 Ribonuclease-III-like BKB96_RS01565 PF05362 Lon protease (S16) C-terminal proteolytic domain BKB96_RS01565 PF18073 Rubredoxin metal binding domain BKB96_RS01570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BKB96_RS01580 PF00069 Protein kinase domain BKB96_RS01585 PF10458 Valyl tRNA synthetase tRNA binding arm BKB96_RS01585 PF00133 tRNA synthetases class I (I, L, M and V) BKB96_RS01585 PF08264 Anticodon-binding domain of tRNA BKB96_RS01605 PF01813 ATP synthase subunit D BKB96_RS01610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKB96_RS01610 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKB96_RS01615 PF16886 ATPsynthase alpha/beta subunit N-term extension BKB96_RS01615 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKB96_RS01615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKB96_RS01620 PF10962 Protein of unknown function (DUF2764) BKB96_RS01625 PF06188 HrpE/YscL/FliH and V-type ATPase subunit E BKB96_RS01640 PF00923 Transaldolase/Fructose-6-phosphate aldolase BKB96_RS01645 PF04998 RNA polymerase Rpb1, domain 5 BKB96_RS01645 PF04997 RNA polymerase Rpb1, domain 1 BKB96_RS01645 PF05000 RNA polymerase Rpb1, domain 4 BKB96_RS01645 PF04983 RNA polymerase Rpb1, domain 3 BKB96_RS01645 PF00623 RNA polymerase Rpb1, domain 2 BKB96_RS01650 PF00562 RNA polymerase Rpb2, domain 6 BKB96_RS01650 PF10385 RNA polymerase beta subunit external 1 domain BKB96_RS01650 PF04565 RNA polymerase Rpb2, domain 3 BKB96_RS01650 PF04561 RNA polymerase Rpb2, domain 2 BKB96_RS01650 PF04563 RNA polymerase beta subunit BKB96_RS01650 PF04560 RNA polymerase Rpb2, domain 7 BKB96_RS01655 PF16320 Ribosomal protein L7/L12 dimerisation domain BKB96_RS01655 PF00542 Ribosomal protein L7/L12 C-terminal domain BKB96_RS01660 PF00466 Ribosomal protein L10 BKB96_RS01665 PF00687 Ribosomal protein L1p/L10e family BKB96_RS01670 PF00298 Ribosomal protein L11, RNA binding domain BKB96_RS01670 PF03946 Ribosomal protein L11, N-terminal domain BKB96_RS01675 PF02357 Transcription termination factor nusG BKB96_RS01690 PF03143 Elongation factor Tu C-terminal domain BKB96_RS01690 PF03144 Elongation factor Tu domain 2 BKB96_RS01690 PF00009 Elongation factor Tu GTP binding domain BKB96_RS01700 PF01176 Translation initiation factor 1A / IF-1 BKB96_RS01710 PF02657 Fe-S metabolism associated domain BKB96_RS01740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BKB96_RS01745 PF00121 Triosephosphate isomerase BKB96_RS01750 PF13742 OB-fold nucleic acid binding domain BKB96_RS01750 PF02601 Exonuclease VII, large subunit BKB96_RS01755 PF02609 Exonuclease VII small subunit BKB96_RS01765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BKB96_RS01765 PF02780 Transketolase, C-terminal domain BKB96_RS01765 PF02779 Transketolase, pyrimidine binding domain BKB96_RS01770 PF00224 Pyruvate kinase, barrel domain BKB96_RS01770 PF02887 Pyruvate kinase, alpha/beta domain BKB96_RS01775 PF17755 UvrA DNA-binding domain BKB96_RS01775 PF17760 UvrA interaction domain BKB96_RS01780 PF12169 DNA polymerase III subunits gamma and tau domain III BKB96_RS01785 PF02575 YbaB/EbfC DNA-binding family BKB96_RS01790 PF05524 PEP-utilising enzyme, N-terminal BKB96_RS01790 PF00391 PEP-utilising enzyme, mobile domain BKB96_RS01790 PF02896 PEP-utilising enzyme, TIM barrel domain BKB96_RS01795 PF00381 PTS HPr component phosphorylation site BKB96_RS01815 PF02780 Transketolase, C-terminal domain BKB96_RS01815 PF02779 Transketolase, pyrimidine binding domain BKB96_RS01820 PF00226 DnaJ domain BKB96_RS01820 PF01556 DnaJ C terminal domain BKB96_RS01820 PF00684 DnaJ central domain BKB96_RS01825 PF01165 Ribosomal protein S21 BKB96_RS01830 PF00814 Glycoprotease family BKB96_RS01835 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKB96_RS01835 PF05362 Lon protease (S16) C-terminal proteolytic domain BKB96_RS01835 PF00004 ATPase family associated with various cellular activities (AAA) BKB96_RS01845 PF00753 Metallo-beta-lactamase superfamily BKB96_RS01850 PF00589 Phage integrase family BKB96_RS01850 PF02899 Phage integrase, N-terminal SAM-like domain BKB96_RS01855 PF12848 ABC transporter BKB96_RS01855 PF00005 ABC transporter BKB96_RS01860 PF02545 Maf-like protein BKB96_RS01880 PF01327 Polypeptide deformylase BKB96_RS01885 PF00398 Ribosomal RNA adenine dimethylase BKB96_RS01895 PF03190 Protein of unknown function, DUF255 BKB96_RS01930 PF00701 Dihydrodipicolinate synthetase family BKB96_RS01935 PF00696 Amino acid kinase family BKB96_RS01940 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKB96_RS01940 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKB96_RS01945 PF05173 Dihydrodipicolinate reductase, C-terminus BKB96_RS01945 PF01113 Dihydrodipicolinate reductase, N-terminus BKB96_RS01955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKB96_RS01960 PF01202 Shikimate kinase BKB96_RS01965 PF01264 Chorismate synthase BKB96_RS01970 PF01761 3-dehydroquinate synthase BKB96_RS01975 PF01488 Shikimate / quinate 5-dehydrogenase BKB96_RS01975 PF01487 Type I 3-dehydroquinase BKB96_RS01975 PF08501 Shikimate dehydrogenase substrate binding domain BKB96_RS01980 PF11019 Protein of unknown function (DUF2608) BKB96_RS01985 PF04966 Carbohydrate-selective porin, OprB family BKB96_RS01990 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) BKB96_RS01995 PF13520 Amino acid permease BKB96_RS02000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BKB96_RS02000 PF01266 FAD dependent oxidoreductase BKB96_RS02005 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKB96_RS02005 PF00056 lactate/malate dehydrogenase, NAD binding domain BKB96_RS02010 PF17446 Late transcription unit A BKB96_RS02015 PF00342 Phosphoglucose isomerase BKB96_RS02020 PF16360 GTP-binding GTPase Middle Region BKB96_RS02020 PF13167 GTP-binding GTPase N-terminal BKB96_RS02020 PF01926 50S ribosome-binding GTPase BKB96_RS02025 PF12706 Beta-lactamase superfamily domain BKB96_RS02025 PF03099 Biotin/lipoate A/B protein ligase family BKB96_RS02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKB96_RS02035 PF01817 Chorismate mutase type II BKB96_RS02035 PF00793 DAHP synthetase I family BKB96_RS02055 PF01230 HIT domain BKB96_RS02060 PF03690 Uncharacterised protein family (UPF0160) BKB96_RS02070 PF02594 Uncharacterised ACR, YggU family COG1872 BKB96_RS02080 PF00155 Aminotransferase class I and II BKB96_RS02095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKB96_RS02095 PF03129 Anticodon binding domain BKB96_RS02095 PF04073 Aminoacyl-tRNA editing domain BKB96_RS02100 PF01628 HrcA protein C terminal domain BKB96_RS02105 PF01025 GrpE BKB96_RS02110 PF00012 Hsp70 protein BKB96_RS02115 PF08206 Ribonuclease B OB domain BKB96_RS02115 PF00773 RNB domain BKB96_RS02130 PF01380 SIS domain BKB96_RS02130 PF00571 CBS domain BKB96_RS02135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKB96_RS02135 PF00364 Biotin-requiring enzyme BKB96_RS02135 PF02817 e3 binding domain BKB96_RS02140 PF00375 Sodium:dicarboxylate symporter family BKB96_RS02145 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BKB96_RS02150 PF00588 SpoU rRNA Methylase family BKB96_RS02155 PF17785 PUA-like domain BKB96_RS02155 PF10672 S-adenosylmethionine-dependent methyltransferase BKB96_RS02160 PF00677 Lumazine binding domain BKB96_RS02165 PF03477 ATP cone domain BKB96_RS02170 PF01258 Prokaryotic dksA/traR C4-type zinc finger BKB96_RS02175 PF01252 Signal peptidase (SPase) II BKB96_RS02185 PF12627 Probable RNA and SrmB- binding site of polymerase A BKB96_RS02185 PF12626 Polymerase A arginine-rich C-terminus BKB96_RS02185 PF01743 Poly A polymerase head domain BKB96_RS02190 PF07578 Lipid A Biosynthesis N-terminal domain BKB96_RS02190 PF02684 Lipid-A-disaccharide synthetase BKB96_RS02195 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS02195 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS02205 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS02205 PF03797 Autotransporter beta-domain BKB96_RS02205 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS02220 PF01297 Zinc-uptake complex component A periplasmic BKB96_RS02225 PF00005 ABC transporter BKB96_RS02230 PF00950 ABC 3 transport family BKB96_RS02235 PF01926 50S ribosome-binding GTPase BKB96_RS02235 PF01018 GTP1/OBG BKB96_RS02240 PF01016 Ribosomal L27 protein BKB96_RS02245 PF00829 Ribosomal prokaryotic L21 protein BKB96_RS02270 PF02130 Uncharacterized protein family UPF0054 BKB96_RS02275 PF00571 CBS domain BKB96_RS02275 PF03471 Transporter associated domain BKB96_RS02280 PF01740 STAS domain BKB96_RS02285 PF12228 Protein of unknown function (DUF3604) BKB96_RS02295 PF04055 Radical SAM superfamily BKB96_RS02305 PF01209 ubiE/COQ5 methyltransferase family BKB96_RS02310 PF03682 Uncharacterised protein family (UPF0158) BKB96_RS02315 PF01678 Diaminopimelate epimerase BKB96_RS02320 PF00574 Clp protease BKB96_RS02325 PF00464 Serine hydroxymethyltransferase BKB96_RS02335 PF02542 YgbB family BKB96_RS02340 PF00667 FAD binding domain BKB96_RS02340 PF00258 Flavodoxin BKB96_RS02340 PF00175 Oxidoreductase NAD-binding domain BKB96_RS02345 PF00338 Ribosomal protein S10p/S20e BKB96_RS02350 PF03764 Elongation factor G, domain IV BKB96_RS02350 PF00009 Elongation factor Tu GTP binding domain BKB96_RS02350 PF03144 Elongation factor Tu domain 2 BKB96_RS02350 PF00679 Elongation factor G C-terminus BKB96_RS02350 PF14492 Elongation Factor G, domain II BKB96_RS02355 PF00177 Ribosomal protein S7p/S5e BKB96_RS02360 PF00164 Ribosomal protein S12/S23 BKB96_RS02370 PF11818 C-terminal domain of tail specific protease (DUF3340) BKB96_RS02370 PF17804 Tail specific protease N-terminal domain BKB96_RS02370 PF03572 Peptidase family S41 BKB96_RS02370 PF00595 PDZ domain BKB96_RS02375 PF05745 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) BKB96_RS02380 PF01345 Domain of unknown function DUF11 BKB96_RS02380 PF03504 Chlamydia cysteine-rich outer membrane protein 6 BKB96_RS02385 PF03503 Chlamydia cysteine-rich outer membrane protein 3 BKB96_RS02395 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKB96_RS02400 PF12728 Helix-turn-helix domain BKB96_RS02405 PF17768 RecJ OB domain BKB96_RS02405 PF02272 DHHA1 domain BKB96_RS02405 PF01368 DHH family BKB96_RS02410 PF02355 Protein export membrane protein BKB96_RS02410 PF07549 SecD/SecF GG Motif BKB96_RS02430 PF01255 Putative undecaprenyl diphosphate synthase BKB96_RS02440 PF02224 Cytidylate kinase BKB96_RS02445 PF00501 AMP-binding enzyme BKB96_RS02445 PF01553 Acyltransferase BKB96_RS02450 PF00750 tRNA synthetases class I (R) BKB96_RS02450 PF05746 DALR anticodon binding domain BKB96_RS02450 PF03485 Arginyl tRNA synthetase N terminal domain BKB96_RS02455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKB96_RS02465 PF01709 Transcriptional regulator BKB96_RS02470 PF00583 Acetyltransferase (GNAT) family BKB96_RS02485 PF00149 Calcineurin-like phosphoesterase BKB96_RS02490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BKB96_RS02495 PF01416 tRNA pseudouridine synthase BKB96_RS02500 PF13419 Haloacid dehalogenase-like hydrolase BKB96_RS02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKB96_RS02520 PF00512 His Kinase A (phospho-acceptor) domain BKB96_RS02525 PF00158 Sigma-54 interaction domain BKB96_RS02525 PF02954 Bacterial regulatory protein, Fis family BKB96_RS02525 PF00072 Response regulator receiver domain BKB96_RS02540 PF02565 Recombination protein O C terminal BKB96_RS02565 PF01809 Putative membrane protein insertion efficiency factor BKB96_RS02575 PF03484 tRNA synthetase B5 domain BKB96_RS02575 PF03483 B3/4 domain BKB96_RS02575 PF03147 Ferredoxin-fold anticodon binding domain BKB96_RS02575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BKB96_RS02575 PF01588 Putative tRNA binding domain BKB96_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS02590 PF12911 N-terminal TM domain of oligopeptide transport permease C BKB96_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS02630 PF00762 Ferrochelatase BKB96_RS02650 PF00483 Nucleotidyl transferase BKB96_RS02660 PF07497 Rho termination factor, RNA-binding domain BKB96_RS02660 PF07498 Rho termination factor, N-terminal domain BKB96_RS02660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKB96_RS02665 PF01121 Dephospho-CoA kinase BKB96_RS02670 PF00476 DNA polymerase family A BKB96_RS02670 PF01367 5'-3' exonuclease, C-terminal SAM fold BKB96_RS02670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BKB96_RS02675 PF01343 Peptidase family S49 BKB96_RS02680 PF03219 TLC ATP/ADP transporter BKB96_RS02685 PF01066 CDP-alcohol phosphatidyltransferase BKB96_RS02700 PF00772 DnaB-like helicase N terminal domain BKB96_RS02700 PF03796 DnaB-like helicase C terminal domain BKB96_RS02710 PF01134 Glucose inhibited division protein A BKB96_RS02710 PF13932 GidA associated domain BKB96_RS02715 PF10437 Bacterial lipoate protein ligase C-terminus BKB96_RS02715 PF03099 Biotin/lipoate A/B protein ligase family BKB96_RS02720 PF00334 Nucleoside diphosphate kinase BKB96_RS02725 PF01330 RuvA N terminal domain BKB96_RS02730 PF02075 Crossover junction endodeoxyribonuclease RuvC BKB96_RS02750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BKB96_RS02750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKB96_RS02755 PF01196 Ribosomal protein L17 BKB96_RS02760 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BKB96_RS02760 PF01000 RNA polymerase Rpb3/RpoA insert domain BKB96_RS02760 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BKB96_RS02765 PF00411 Ribosomal protein S11 BKB96_RS02770 PF00416 Ribosomal protein S13/S18 BKB96_RS02775 PF00344 SecY translocase BKB96_RS02780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BKB96_RS02785 PF03719 Ribosomal protein S5, C-terminal domain BKB96_RS02785 PF00333 Ribosomal protein S5, N-terminal domain BKB96_RS02790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BKB96_RS02795 PF00347 Ribosomal protein L6 BKB96_RS02800 PF00410 Ribosomal protein S8 BKB96_RS02805 PF00281 Ribosomal protein L5 BKB96_RS02805 PF00673 ribosomal L5P family C-terminus BKB96_RS02810 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BKB96_RS02810 PF00467 KOW motif BKB96_RS02815 PF00238 Ribosomal protein L14p/L23e BKB96_RS02820 PF00366 Ribosomal protein S17 BKB96_RS02825 PF00831 Ribosomal L29 protein BKB96_RS02830 PF00252 Ribosomal protein L16p/L10e BKB96_RS02835 PF00189 Ribosomal protein S3, C-terminal domain BKB96_RS02835 PF07650 KH domain BKB96_RS02840 PF00237 Ribosomal protein L22p/L17e BKB96_RS02845 PF00203 Ribosomal protein S19 BKB96_RS02850 PF03947 Ribosomal Proteins L2, C-terminal domain BKB96_RS02850 PF00181 Ribosomal Proteins L2, RNA binding domain BKB96_RS02855 PF00276 Ribosomal protein L23 BKB96_RS02860 PF00573 Ribosomal protein L4/L1 family BKB96_RS02865 PF00297 Ribosomal protein L3 BKB96_RS02875 PF02911 Formyl transferase, C-terminal domain BKB96_RS02875 PF00551 Formyl transferase BKB96_RS02880 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BKB96_RS02880 PF00132 Bacterial transferase hexapeptide (six repeats) BKB96_RS02885 PF07977 FabA-like domain BKB96_RS02890 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BKB96_RS02895 PF00795 Carbon-nitrogen hydrolase BKB96_RS02900 PF03061 Thioesterase superfamily BKB96_RS02905 PF00929 Exonuclease BKB96_RS02910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BKB96_RS02915 PF10915 Protein of unknown function (DUF2709) BKB96_RS02925 PF00085 Thioredoxin BKB96_RS02930 PF00588 SpoU rRNA Methylase family BKB96_RS02935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKB96_RS02935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BKB96_RS02940 PF01336 OB-fold nucleic acid binding domain BKB96_RS02940 PF02938 GAD domain BKB96_RS02940 PF00152 tRNA synthetases class II (D, K and N) BKB96_RS02945 PF13393 Histidyl-tRNA synthetase BKB96_RS02945 PF03129 Anticodon binding domain BKB96_RS02955 PF07690 Major Facilitator Superfamily BKB96_RS02960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKB96_RS02960 PF14579 Helix-hairpin-helix motif BKB96_RS02960 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKB96_RS02960 PF02811 PHP domain BKB96_RS02990 PF07943 Penicillin-binding protein 5, C-terminal domain BKB96_RS02990 PF00768 D-alanyl-D-alanine carboxypeptidase BKB96_RS03010 PF01189 16S rRNA methyltransferase RsmB/F BKB96_RS03010 PF01029 NusB family BKB96_RS03015 PF05525 Branched-chain amino acid transport protein BKB96_RS03020 PF04434 SWIM zinc finger BKB96_RS03020 PF00176 SNF2 family N-terminal domain BKB96_RS03020 PF00271 Helicase conserved C-terminal domain BKB96_RS03030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKB96_RS03030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKB96_RS03035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BKB96_RS03035 PF04055 Radical SAM superfamily BKB96_RS03040 PF01514 Secretory protein of YscJ/FliF family BKB96_RS03055 PF02108 Flagellar assembly protein FliH BKB96_RS03060 PF00813 FliP family BKB96_RS03065 PF01313 Bacterial export proteins, family 3 BKB96_RS03070 PF01311 Bacterial export proteins, family 1 BKB96_RS03095 PF07963 Prokaryotic N-terminal methylation motif BKB96_RS03100 PF00482 Type II secretion system (T2SS), protein F BKB96_RS03105 PF00437 Type II/IV secretion system protein BKB96_RS03110 PF00263 Bacterial type II and III secretion system protein BKB96_RS03110 PF03958 Bacterial type II/III secretion system short domain BKB96_RS03110 PF11741 AMIN domain BKB96_RS03110 PF07660 Secretin and TonB N terminus short domain BKB96_RS03120 PF01321 Creatinase/Prolidase N-terminal domain BKB96_RS03120 PF00557 Metallopeptidase family M24 BKB96_RS03125 PF01119 DNA mismatch repair protein, C-terminal domain BKB96_RS03125 PF08676 MutL C terminal dimerisation domain BKB96_RS03145 PF04888 Secretion system effector C (SseC) like family BKB96_RS03150 PF00892 EamA-like transporter family BKB96_RS03155 PF02824 TGS domain BKB96_RS03155 PF03129 Anticodon binding domain BKB96_RS03155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKB96_RS03155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKB96_RS03160 PF13614 AAA domain BKB96_RS03165 PF03677 Uncharacterised protein family (UPF0137) BKB96_RS03170 PF17435 Family of unknown function (DUF5414) BKB96_RS03175 PF00579 tRNA synthetases class I (W and Y) BKB96_RS03180 PF02151 UvrB/uvrC motif BKB96_RS03180 PF04851 Type III restriction enzyme, res subunit BKB96_RS03180 PF00271 Helicase conserved C-terminal domain BKB96_RS03180 PF12344 Ultra-violet resistance protein B BKB96_RS03180 PF17757 UvrB interaction domain BKB96_RS03185 PF03952 Enolase, N-terminal domain BKB96_RS03185 PF00113 Enolase, C-terminal TIM barrel domain BKB96_RS03205 PF13183 4Fe-4S dicluster domain BKB96_RS03205 PF13085 2Fe-2S iron-sulfur cluster binding domain BKB96_RS03210 PF00890 FAD binding domain BKB96_RS03210 PF02910 Fumarate reductase flavoprotein C-term BKB96_RS03230 PF01026 TatD related DNase BKB96_RS03240 PF01618 MotA/TolQ/ExbB proton channel family BKB96_RS03255 PF07676 WD40-like Beta Propeller Repeat BKB96_RS03260 PF00691 OmpA family BKB96_RS03265 PF01476 LysM domain BKB96_RS03275 PF10417 C-terminal domain of 1-Cys peroxiredoxin BKB96_RS03275 PF00578 AhpC/TSA family BKB96_RS03285 PF00118 TCP-1/cpn60 chaperonin family BKB96_RS03290 PF07075 Protein of unknown function (DUF1343) BKB96_RS03295 PF01725 Ham1 family BKB96_RS03305 PF03167 Uracil DNA glycosylase superfamily BKB96_RS03310 PF00580 UvrD/REP helicase N-terminal domain BKB96_RS03310 PF13361 UvrD-like helicase C-terminal domain BKB96_RS03315 PF04552 Sigma-54, DNA binding domain BKB96_RS03315 PF00309 Sigma-54 factor, Activator interacting domain (AID) BKB96_RS03315 PF04963 Sigma-54 factor, core binding domain BKB96_RS03320 PF03070 TENA/THI-4/PQQC family BKB96_RS03325 PF00881 Nitroreductase family BKB96_RS03325 PF01996 F420-0:Gamma-glutamyl ligase BKB96_RS03330 PF00186 Dihydrofolate reductase BKB96_RS03335 PF00809 Pterin binding enzyme BKB96_RS03335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BKB96_RS03340 PF02152 Dihydroneopterin aldolase BKB96_RS03345 PF04539 Sigma-70 region 3 BKB96_RS03345 PF03979 Sigma-70 factor, region 1.1 BKB96_RS03345 PF04542 Sigma-70 region 2 BKB96_RS03345 PF04545 Sigma-70, region 4 BKB96_RS03345 PF00140 Sigma-70 factor, region 1.2 BKB96_RS03350 PF06785 Uncharacterised protein family (UPF0242) N-terminus BKB96_RS03350 PF18095 UPF0242 C-terminal PAS-like domain BKB96_RS03355 PF01649 Ribosomal protein S20 BKB96_RS03395 PF03023 Lipid II flippase MurJ BKB96_RS03400 PF01261 Xylose isomerase-like TIM barrel BKB96_RS03405 PF00163 Ribosomal protein S4/S9 N-terminal domain BKB96_RS03405 PF01479 S4 domain BKB96_RS03410 PF00581 Rhodanese-like domain BKB96_RS03410 PF12368 Rhodanase C-terminal BKB96_RS03410 PF17773 UPF0176 acylphosphatase like domain BKB96_RS03415 PF00348 Polyprenyl synthetase BKB96_RS03420 PF12804 MobA-like NTP transferase domain BKB96_RS03420 PF00132 Bacterial transferase hexapeptide (six repeats) BKB96_RS03425 PF00486 Transcriptional regulatory protein, C terminal BKB96_RS03440 PF02511 Thymidylate synthase complementing protein BKB96_RS03445 PF00490 Delta-aminolevulinic acid dehydratase BKB96_RS03450 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BKB96_RS03450 PF11973 NQRA C-terminal domain BKB96_RS03460 PF01272 Transcription elongation factor, GreA/GreB, C-term BKB96_RS03460 PF03449 Transcription elongation factor, N-terminal BKB96_RS03470 PF00155 Aminotransferase class I and II BKB96_RS03480 PF13361 UvrD-like helicase C-terminal domain BKB96_RS03480 PF00580 UvrD/REP helicase N-terminal domain BKB96_RS03490 PF07690 Major Facilitator Superfamily BKB96_RS03500 PF01131 DNA topoisomerase BKB96_RS03500 PF01396 Topoisomerase DNA binding C4 zinc finger BKB96_RS03500 PF01751 Toprim domain BKB96_RS03505 PF01207 Dihydrouridine synthase (Dus) BKB96_RS03530 PF01812 5-formyltetrahydrofolate cyclo-ligase family BKB96_RS03535 PF00154 recA bacterial DNA recombination protein BKB96_RS03545 PF13538 UvrD-like helicase C-terminal domain BKB96_RS03555 PF00005 ABC transporter BKB96_RS03565 PF00793 DAHP synthetase I family BKB96_RS03585 PF01479 S4 domain BKB96_RS03585 PF00849 RNA pseudouridylate synthase BKB96_RS03595 PF00521 DNA gyrase/topoisomerase IV, subunit A BKB96_RS03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKB96_RS03600 PF00986 DNA gyrase B subunit, carboxyl terminus BKB96_RS03600 PF00204 DNA gyrase B BKB96_RS03600 PF01751 Toprim domain BKB96_RS03605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BKB96_RS03610 PF05932 Tir chaperone protein (CesT) family BKB96_RS03620 PF17376 Family of unknown function (DUF5398) BKB96_RS03625 PF17401 Family of unknown function (DUF5407) BKB96_RS03640 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKB96_RS03640 PF18269 T3SS EscN ATPase C-terminal domain BKB96_RS03640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKB96_RS03650 PF17458 Family of unknown function (DUF5421) BKB96_RS03660 PF03793 PASTA domain BKB96_RS03660 PF00069 Protein kinase domain BKB96_RS03665 PF03958 Bacterial type II/III secretion system short domain BKB96_RS03665 PF00263 Bacterial type II and III secretion system protein BKB96_RS03675 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BKB96_RS03695 PF01765 Ribosome recycling factor BKB96_RS03700 PF00696 Amino acid kinase family BKB96_RS03705 PF00889 Elongation factor TS BKB96_RS03710 PF00318 Ribosomal protein S2 BKB96_RS03720 PF01308 Chlamydia major outer membrane protein BKB96_RS03725 PF00905 Penicillin binding protein transpeptidase domain BKB96_RS03725 PF03717 Penicillin-binding Protein dimerisation domain BKB96_RS03735 PF01458 Uncharacterized protein family (UPF0051) BKB96_RS03740 PF00005 ABC transporter BKB96_RS03745 PF01458 Uncharacterized protein family (UPF0051) BKB96_RS03750 PF00266 Aminotransferase class-V BKB96_RS03755 PF02195 ParB-like nuclease domain BKB96_RS03755 PF17762 HTH domain found in ParB protein BKB96_RS03760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKB96_RS03760 PF00005 ABC transporter BKB96_RS03765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKB96_RS03765 PF00005 ABC transporter BKB96_RS03770 PF01865 Protein of unknown function DUF47 BKB96_RS03775 PF01384 Phosphate transporter family BKB96_RS03780 PF00162 Phosphoglycerate kinase BKB96_RS03800 PF00633 Helix-hairpin-helix motif BKB96_RS03800 PF10576 Iron-sulfur binding domain of endonuclease III BKB96_RS03800 PF00730 HhH-GPD superfamily base excision DNA repair protein BKB96_RS03805 PF01926 50S ribosome-binding GTPase BKB96_RS03805 PF12631 MnmE helical domain BKB96_RS03805 PF10396 GTP-binding protein TrmE N-terminus BKB96_RS03810 PF02666 Phosphatidylserine decarboxylase BKB96_RS03820 PF07517 SecA DEAD-like domain BKB96_RS03820 PF01043 SecA preprotein cross-linking domain BKB96_RS03820 PF07516 SecA Wing and Scaffold domain BKB96_RS03830 PF01926 50S ribosome-binding GTPase BKB96_RS03830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BKB96_RS03835 PF13735 tRNA nucleotidyltransferase domain 2 putative BKB96_RS03835 PF12627 Probable RNA and SrmB- binding site of polymerase A BKB96_RS03835 PF01743 Poly A polymerase head domain BKB96_RS03840 PF10431 C-terminal, D2-small domain, of ClpB protein BKB96_RS03840 PF06689 ClpX C4-type zinc finger BKB96_RS03840 PF07724 AAA domain (Cdc48 subfamily) BKB96_RS03845 PF00574 Clp protease BKB96_RS03850 PF05697 Bacterial trigger factor protein (TF) BKB96_RS03850 PF05698 Bacterial trigger factor protein (TF) C-terminus BKB96_RS03865 PF00176 SNF2 family N-terminal domain BKB96_RS03865 PF04434 SWIM zinc finger BKB96_RS03865 PF00271 Helicase conserved C-terminal domain BKB96_RS03875 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BKB96_RS03875 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BKB96_RS03890 PF01308 Chlamydia major outer membrane protein BKB96_RS03895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BKB96_RS03895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BKB96_RS03900 PF01704 UTP--glucose-1-phosphate uridylyltransferase BKB96_RS03910 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKB96_RS03910 PF18269 T3SS EscN ATPase C-terminal domain BKB96_RS03910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKB96_RS03930 PF00266 Aminotransferase class-V BKB96_RS03935 PF00300 Histidine phosphatase superfamily (branch 1) BKB96_RS03940 PF01479 S4 domain BKB96_RS03940 PF00849 RNA pseudouridylate synthase BKB96_RS03950 PF02237 Biotin protein ligase C terminal domain BKB96_RS03950 PF08279 HTH domain BKB96_RS03950 PF03099 Biotin/lipoate A/B protein ligase family BKB96_RS03955 PF01098 Cell cycle protein BKB96_RS03960 PF00403 Heavy-metal-associated domain BKB96_RS03970 PF02403 Seryl-tRNA synthetase N-terminal domain BKB96_RS03970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKB96_RS03975 PF01872 RibD C-terminal domain BKB96_RS03975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKB96_RS03980 PF00925 GTP cyclohydrolase II BKB96_RS03980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BKB96_RS03985 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKB96_RS04000 PF01235 Sodium:alanine symporter family BKB96_RS04005 PF01161 Phosphatidylethanolamine-binding protein BKB96_RS04015 PF00753 Metallo-beta-lactamase superfamily BKB96_RS04020 PF17854 FtsK alpha domain BKB96_RS04020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BKB96_RS04020 PF01580 FtsK/SpoIIIE family BKB96_RS04020 PF09397 Ftsk gamma domain BKB96_RS04050 PF00111 2Fe-2S iron-sulfur cluster binding domain BKB96_RS04050 PF00175 Oxidoreductase NAD-binding domain BKB96_RS04055 PF02699 Preprotein translocase subunit BKB96_RS04060 PF05958 tRNA (Uracil-5-)-methyltransferase BKB96_RS04075 PF01593 Flavin containing amine oxidoreductase BKB96_RS04080 PF06969 HemN C-terminal domain BKB96_RS04080 PF04055 Radical SAM superfamily BKB96_RS04085 PF01208 Uroporphyrinogen decarboxylase (URO-D) BKB96_RS04090 PF02559 CarD-like/TRCF domain BKB96_RS04090 PF00271 Helicase conserved C-terminal domain BKB96_RS04090 PF00270 DEAD/DEAH box helicase BKB96_RS04090 PF17757 UvrB interaction domain BKB96_RS04090 PF03461 TRCF domain BKB96_RS04095 PF02272 DHHA1 domain BKB96_RS04095 PF01411 tRNA synthetases class II (A) BKB96_RS04095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKB96_RS04120 PF00456 Transketolase, thiamine diphosphate binding domain BKB96_RS04120 PF02780 Transketolase, C-terminal domain BKB96_RS04120 PF02779 Transketolase, pyrimidine binding domain BKB96_RS04130 PF01132 Elongation factor P (EF-P) OB domain BKB96_RS04130 PF08207 Elongation factor P (EF-P) KOW-like domain BKB96_RS04130 PF09285 Elongation factor P, C-terminal BKB96_RS04145 PF00118 TCP-1/cpn60 chaperonin family BKB96_RS04155 PF01225 Mur ligase family, catalytic domain BKB96_RS04155 PF08245 Mur ligase middle domain BKB96_RS04155 PF02875 Mur ligase family, glutamate ligase domain BKB96_RS04160 PF00953 Glycosyl transferase family 4 BKB96_RS04165 PF02875 Mur ligase family, glutamate ligase domain BKB96_RS04165 PF08245 Mur ligase middle domain BKB96_RS04175 PF01098 Cell cycle protein BKB96_RS04180 PF04101 Glycosyltransferase family 28 C-terminal domain BKB96_RS04180 PF03033 Glycosyltransferase family 28 N-terminal domain BKB96_RS04185 PF08245 Mur ligase middle domain BKB96_RS04185 PF07478 D-ala D-ala ligase C-terminus BKB96_RS04185 PF01820 D-ala D-ala ligase N-terminus BKB96_RS04185 PF01225 Mur ligase family, catalytic domain BKB96_RS04185 PF02875 Mur ligase family, glutamate ligase domain BKB96_RS04200 PF01740 STAS domain BKB96_RS04210 PF04055 Radical SAM superfamily BKB96_RS04225 PF02801 Beta-ketoacyl synthase, C-terminal domain BKB96_RS04225 PF00109 Beta-ketoacyl synthase, N-terminal domain BKB96_RS04230 PF00293 NUDIX domain BKB96_RS04235 PF00719 Inorganic pyrophosphatase BKB96_RS04245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BKB96_RS04245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BKB96_RS04250 PF00459 Inositol monophosphatase family BKB96_RS04260 PF01553 Acyltransferase BKB96_RS04260 PF00501 AMP-binding enzyme BKB96_RS04265 PF00155 Aminotransferase class I and II BKB96_RS04270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BKB96_RS04270 PF17764 3′ DNA-binding domain (3′BD) BKB96_RS04270 PF04851 Type III restriction enzyme, res subunit BKB96_RS04270 PF18074 Primosomal protein N C-terminal domain BKB96_RS04285 PF01336 OB-fold nucleic acid binding domain BKB96_RS04285 PF00152 tRNA synthetases class II (D, K and N) BKB96_RS04290 PF09190 DALR domain BKB96_RS04290 PF01406 tRNA synthetases class I (C) catalytic domain BKB96_RS04300 PF00825 Ribonuclease P BKB96_RS04305 PF00468 Ribosomal protein L34 BKB96_RS04310 PF00444 Ribosomal protein L36 BKB96_RS04315 PF00253 Ribosomal protein S14p/S29e BKB96_RS04335 PF01541 GIY-YIG catalytic domain BKB96_RS04335 PF08459 UvrC Helix-hairpin-helix N-terminal BKB96_RS04340 PF01624 MutS domain I BKB96_RS04340 PF05192 MutS domain III BKB96_RS04340 PF05190 MutS family domain IV BKB96_RS04340 PF00488 MutS domain V BKB96_RS04340 PF05188 MutS domain II BKB96_RS04350 PF08275 DNA primase catalytic core, N-terminal domain BKB96_RS04350 PF01807 CHC2 zinc finger BKB96_RS04365 PF02091 Glycyl-tRNA synthetase alpha subunit BKB96_RS04365 PF02092 Glycyl-tRNA synthetase beta subunit BKB96_RS04370 PF01066 CDP-alcohol phosphatidyltransferase BKB96_RS04375 PF08323 Starch synthase catalytic domain BKB96_RS04375 PF00534 Glycosyl transferases group 1 BKB96_RS04390 PF01386 Ribosomal L25p family BKB96_RS04390 PF14693 Ribosomal protein TL5, C-terminal domain BKB96_RS04395 PF01195 Peptidyl-tRNA hydrolase BKB96_RS04400 PF01250 Ribosomal protein S6 BKB96_RS04405 PF01084 Ribosomal protein S18 BKB96_RS04410 PF03948 Ribosomal protein L9, C-terminal domain BKB96_RS04410 PF01281 Ribosomal protein L9, N-terminal domain BKB96_RS04415 PF00288 GHMP kinases N terminal domain BKB96_RS04430 PF05193 Peptidase M16 inactive domain BKB96_RS04430 PF00675 Insulinase (Peptidase family M16) BKB96_RS04440 PF10150 Ribonuclease E/G family BKB96_RS04440 PF00575 S1 RNA binding domain BKB96_RS04455 PF01783 Ribosomal L32p protein family BKB96_RS04460 PF02504 Fatty acid synthesis protein BKB96_RS04465 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS04465 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS04465 PF03797 Autotransporter beta-domain BKB96_RS04485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKB96_RS04485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKB96_RS04485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKB96_RS04485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKB96_RS04490 PF01380 SIS domain BKB96_RS04495 PF03222 Tryptophan/tyrosine permease family BKB96_RS04500 PF03222 Tryptophan/tyrosine permease family BKB96_RS04505 PF01027 Inhibitor of apoptosis-promoting Bax1 BKB96_RS04510 PF00448 SRP54-type protein, GTPase domain BKB96_RS04515 PF08442 ATP-grasp domain BKB96_RS04515 PF00549 CoA-ligase BKB96_RS04520 PF00549 CoA-ligase BKB96_RS04520 PF02629 CoA binding domain BKB96_RS04525 PF17820 PDZ domain BKB96_RS04525 PF13180 PDZ domain BKB96_RS04530 PF05193 Peptidase M16 inactive domain BKB96_RS04530 PF08367 Peptidase M16C associated BKB96_RS04530 PF00675 Insulinase (Peptidase family M16) BKB96_RS04535 PF02646 RmuC family BKB96_RS04550 PF03477 ATP cone domain BKB96_RS04550 PF02867 Ribonucleotide reductase, barrel domain BKB96_RS04550 PF00317 Ribonucleotide reductase, all-alpha domain BKB96_RS04555 PF00268 Ribonucleotide reductase, small chain BKB96_RS04560 PF02390 Putative methyltransferase BKB96_RS04570 PF06962 Putative rRNA methylase BKB96_RS04575 PF01565 FAD binding domain BKB96_RS04575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BKB96_RS04580 PF01029 NusB family BKB96_RS04585 PF00707 Translation initiation factor IF-3, C-terminal domain BKB96_RS04585 PF05198 Translation initiation factor IF-3, N-terminal domain BKB96_RS04590 PF01632 Ribosomal protein L35 BKB96_RS04595 PF00453 Ribosomal protein L20 BKB96_RS04600 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BKB96_RS04600 PF01409 tRNA synthetases class II core domain (F) BKB96_RS04625 PF01171 PP-loop family BKB96_RS04630 PF01434 Peptidase family M41 BKB96_RS04630 PF00004 ATPase family associated with various cellular activities (AAA) BKB96_RS04630 PF17862 AAA+ lid domain BKB96_RS04635 PF03725 3' exoribonuclease family, domain 2 BKB96_RS04635 PF00575 S1 RNA binding domain BKB96_RS04635 PF01138 3' exoribonuclease family, domain 1 BKB96_RS04635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BKB96_RS04635 PF00013 KH domain BKB96_RS04640 PF00312 Ribosomal protein S15 BKB96_RS04645 PF14437 MafB19-like deaminase BKB96_RS04685 PF02810 SEC-C motif BKB96_RS04685 PF00557 Metallopeptidase family M24 BKB96_RS04690 PF01914 MarC family integral membrane protein BKB96_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component BKB96_RS04705 PF00206 Lyase BKB96_RS04705 PF10415 Fumarase C C-terminus BKB96_RS04710 PF00916 Sulfate permease family BKB96_RS04710 PF01740 STAS domain BKB96_RS04720 PF03600 Citrate transporter BKB96_RS04725 PF03572 Peptidase family S41 BKB96_RS04725 PF17816 PDZ domain BKB96_RS04730 PF02401 LytB protein BKB96_RS04765 PF02899 Phage integrase, N-terminal SAM-like domain BKB96_RS04765 PF00589 Phage integrase family BKB96_RS04775 PF02806 Alpha amylase, C-terminal all-beta domain BKB96_RS04775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKB96_RS04775 PF00128 Alpha amylase, catalytic domain BKB96_RS04780 PF02902 Ulp1 protease family, C-terminal catalytic domain BKB96_RS04790 PF02902 Ulp1 protease family, C-terminal catalytic domain BKB96_RS04795 PF03797 Autotransporter beta-domain BKB96_RS04795 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS04795 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS04800 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS04800 PF03797 Autotransporter beta-domain BKB96_RS04805 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS04805 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS04810 PF07548 Chlamydia polymorphic membrane protein middle domain BKB96_RS04810 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS04820 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BKB96_RS04820 PF07548 Chlamydia polymorphic membrane protein middle domain