locus-tag	class	description
FYK34_RS00055	COG0723	plastoquinol--plastocyanin reductase activity
FYK34_RS00060	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYK34_RS00065	COG2857	Cytochrome c1
FYK34_RS00075	COG0625	glutathione transferase activity
FYK34_RS00080	COG2969	positive regulation of protein catabolic process
FYK34_RS00085	COG0004	ammonium transporteR
FYK34_RS00090	COG0347	Belongs to the P(II) protein family
FYK34_RS00120	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYK34_RS00140	COG0109	protoheme IX farnesyltransferase activity
FYK34_RS00195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYK34_RS00205	COG0459	protein refolding
FYK34_RS00210	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FYK34_RS00230	COG3046	protein related to deoxyribodipyrimidine photolyase
FYK34_RS00245	COG4221	oxidoreductase activity
FYK34_RS00255	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYK34_RS00270	COG1309	transcriptional regulator
FYK34_RS00300	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYK34_RS00305	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYK34_RS00310	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FYK34_RS00315	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYK34_RS00340	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYK34_RS00345	COG0306	phosphate transporter
FYK34_RS00350	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYK34_RS00370	COG0149	triose-phosphate isomerase activity
FYK34_RS00375	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYK34_RS00385	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS00390	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS00395	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS00400	COG0649	NAD binding
FYK34_RS00415	COG1034	ATP synthesis coupled electron transport
FYK34_RS00420	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYK34_RS00425	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS00435	COG0713	ATP synthesis coupled electron transport
FYK34_RS00450	COG1007	ATP synthesis coupled electron transport
FYK34_RS00480	COG1560	Kdo2-lipid A biosynthetic process
FYK34_RS00490	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYK34_RS00495	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FYK34_RS00500	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FYK34_RS00510	COG1522	sequence-specific DNA binding
FYK34_RS00520	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FYK34_RS00530	COG0625	glutathione transferase activity
FYK34_RS00560	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYK34_RS00560	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYK34_RS00570	COG0583	DNA-binding transcription factor activity
FYK34_RS00585	COG2264	protein methyltransferase activity
FYK34_RS00590	COG0439	Biotin carboxylase
FYK34_RS00595	COG0511	ligase activity, forming carbon-carbon bonds
FYK34_RS00600	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FYK34_RS00605	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FYK34_RS00615	COG2226	methyltransferase
FYK34_RS00625	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYK34_RS00630	COG1252	NADH dehydrogenase
FYK34_RS00645	COG0436	Aminotransferase
FYK34_RS00685	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
FYK34_RS00690	COG0513	Belongs to the DEAD box helicase family
FYK34_RS00710	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FYK34_RS00720	COG2201	protein-glutamate methylesterase activity
FYK34_RS00725	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FYK34_RS00730	COG0840	transmembrane signaling receptor activity
FYK34_RS00735	COG0835	chemotaxis
FYK34_RS00740	COG0840	transmembrane signaling receptor activity
FYK34_RS00755	COG0745	RESPONSE REGULATOR receiver
FYK34_RS00765	COG0527	aspartate kinase activity
FYK34_RS00785	COG4771	TonB-dependent receptor
FYK34_RS00810	COG0577	efflux transmembrane transporter activity
FYK34_RS00810	COG1136	(ABC) transporter
FYK34_RS00815	COG0577	efflux transmembrane transporter activity
FYK34_RS00845	COG0322	excinuclease ABC activity
FYK34_RS00850	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FYK34_RS00870	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYK34_RS00880	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FYK34_RS00895	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYK34_RS00900	COG0402	S-adenosylhomocysteine deaminase activity
FYK34_RS00935	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYK34_RS00945	COG0039	L-malate dehydrogenase activity
FYK34_RS00950	COG2188	Transcriptional regulator
FYK34_RS00955	COG2009	succinate dehydrogenase
FYK34_RS00965	COG1053	succinate dehydrogenase
FYK34_RS00970	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYK34_RS00975	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYK34_RS00985	COG0567	Dehydrogenase, E1 component
FYK34_RS00990	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYK34_RS01000	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYK34_RS01005	COG0045	succinate-CoA ligase (ADP-forming) activity
FYK34_RS01020	COG0477	Major facilitator Superfamily
FYK34_RS01030	COG0840	transmembrane signaling receptor activity
FYK34_RS01035	COG0840	transmembrane signaling receptor activity
FYK34_RS01055	COG0572	uridine kinase
FYK34_RS01070	COG0633	Ferredoxin
FYK34_RS01075	COG0443	Heat shock 70 kDa protein
FYK34_RS01085	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FYK34_RS01095	COG0822	iron-sulfur transferase activity
FYK34_RS01100	COG1104	cysteine desulfurase activity
FYK34_RS01115	COG0747	negative chemotaxis
FYK34_RS01120	COG0601	transmembrane transport
FYK34_RS01125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYK34_RS01130	COG0444	Belongs to the ABC transporter superfamily
FYK34_RS01135	COG4608	Belongs to the ABC transporter superfamily
FYK34_RS01145	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FYK34_RS01155	COG0786	glutamate:sodium symporter activity
FYK34_RS01160	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYK34_RS01195	COG3852	Histidine kinase
FYK34_RS01200	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYK34_RS01205	COG0494	nUDIX hydrolase
FYK34_RS01225	COG0583	DNA-binding transcription factor activity
FYK34_RS01245	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FYK34_RS01250	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYK34_RS01265	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FYK34_RS01275	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FYK34_RS01285	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYK34_RS01310	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS01310	COG1454	alcohol dehydrogenase
FYK34_RS01320	COG0583	DNA-binding transcription factor activity
FYK34_RS01325	COG0667	Aldo Keto reductase
FYK34_RS01335	COG3706	GGDEF domain
FYK34_RS01345	COG0740	serine-type endopeptidase activity
FYK34_RS01350	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYK34_RS01360	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYK34_RS01365	COG0583	DNA-binding transcription factor activity
FYK34_RS01375	COG1346	cytolysis
FYK34_RS01380	COG0789	Transcriptional regulator
FYK34_RS01395	COG1607	acyl-coa hydrolase
FYK34_RS01400	COG0564	pseudouridine synthase activity
FYK34_RS01415	COG0463	Glycosyl transferase, family 2
FYK34_RS01420	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FYK34_RS01425	COG3104	oligopeptide transport
FYK34_RS01430	COG3033	Beta-eliminating lyase
FYK34_RS01475	COG2010	Cytochrome c
FYK34_RS01490	COG3278	Belongs to the heme-copper respiratory oxidase family
FYK34_RS01500	COG0308	aminopeptidase N
FYK34_RS01515	COG2814	Major facilitator Superfamily
FYK34_RS01540	COG4302	ethanolamine ammonia-lyase activity
FYK34_RS01550	COG0531	amino acid
FYK34_RS01555	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FYK34_RS01570	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYK34_RS01575	COG3850	Histidine kinase
FYK34_RS01580	COG2197	response regulator
FYK34_RS01595	COG2181	nitrate reductase activity
FYK34_RS01600	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FYK34_RS01605	COG1140	nitrate reductase beta subunit
FYK34_RS01610	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FYK34_RS01615	COG2223	nitrite transmembrane transporter activity
FYK34_RS01630	COG1301	dicarboxylic acid transport
FYK34_RS01645	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FYK34_RS01650	COG0489	protein tyrosine kinase activity
FYK34_RS01660	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYK34_RS01660	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYK34_RS01680	COG0840	transmembrane signaling receptor activity
FYK34_RS01685	COG0456	acetyltransferase
FYK34_RS01690	COG3022	response to hydroperoxide
FYK34_RS01695	COG1490	D-aminoacyl-tRNA deacylase activity
FYK34_RS01700	COG1289	transmembrane transporter activity
FYK34_RS01705	COG0741	lytic transglycosylase activity
FYK34_RS01705	COG1388	LysM domain
FYK34_RS01710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYK34_RS01715	COG2226	methyltransferase
FYK34_RS01720	COG0328	RNA-DNA hybrid ribonuclease activity
FYK34_RS01730	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FYK34_RS01735	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FYK34_RS01740	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FYK34_RS01745	COG0704	Plays a role in the regulation of phosphate uptake
FYK34_RS01750	COG0248	Ppx GppA phosphatase
FYK34_RS01755	COG0598	Magnesium transport protein CorA
FYK34_RS01760	COG1335	isochorismatase
FYK34_RS01765	COG2217	Heavy metal translocating P-type atpase
FYK34_RS01770	COG2608	mercury ion transmembrane transporter activity
FYK34_RS01775	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FYK34_RS01785	COG5212	phosphodiesterase
FYK34_RS01810	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FYK34_RS01815	COG0129	dihydroxy-acid dehydratase activity
FYK34_RS01825	COG2076	Multidrug Resistance protein
FYK34_RS01835	COG0583	DNA-binding transcription factor activity
FYK34_RS01840	COG1741	Belongs to the pirin family
FYK34_RS01855	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FYK34_RS01860	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FYK34_RS01865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYK34_RS01870	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYK34_RS01875	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYK34_RS01875	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYK34_RS01885	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FYK34_RS01895	COG0596	Alpha beta hydrolase
FYK34_RS01910	COG3121	Chaperone
FYK34_RS01915	COG3188	usher protein
FYK34_RS01955	COG0322	excinuclease ABC activity
FYK34_RS01960	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYK34_RS02010	COG0326	Molecular chaperone. Has ATPase activity
FYK34_RS02040	COG1968	undecaprenyl-diphosphatase activity
FYK34_RS02050	COG2925	Exonuclease
FYK34_RS02055	COG1024	Enoyl-CoA hydratase
FYK34_RS02070	COG3842	ATPase activity
FYK34_RS02075	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYK34_RS02085	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FYK34_RS02090	COG0586	Pfam SNARE associated Golgi protein
FYK34_RS02095	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYK34_RS02100	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYK34_RS02105	COG1862	Preprotein translocase
FYK34_RS02110	COG0343	queuine tRNA-ribosyltransferase activity
FYK34_RS02120	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FYK34_RS02125	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FYK34_RS02130	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FYK34_RS02135	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FYK34_RS02140	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FYK34_RS02145	COG0072	phenylalanine-tRNA ligase activity
FYK34_RS02145	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYK34_RS02150	COG0776	regulation of translation
FYK34_RS02170	COG0500	methyltransferase
FYK34_RS02180	COG2119	membrane
FYK34_RS02185	COG1970	mechanosensitive ion channel activity
FYK34_RS02225	COG2866	Carboxypeptidase
FYK34_RS02240	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYK34_RS02250	COG1704	LemA family
FYK34_RS02255	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYK34_RS02265	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FYK34_RS02270	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYK34_RS02275	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FYK34_RS02320	COG5433	transposase activity
FYK34_RS02325	COG0583	DNA-binding transcription factor activity
FYK34_RS02345	COG1760	l-serine dehydratase
FYK34_RS02350	COG0814	amino acid
FYK34_RS02355	COG2116	formate transmembrane transporter activity
FYK34_RS02365	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYK34_RS02370	COG3142	Participates in the control of copper homeostasis
FYK34_RS02390	COG0659	secondary active sulfate transmembrane transporter activity
FYK34_RS02400	COG2972	Histidine kinase
FYK34_RS02460	COG3979	chitinase
FYK34_RS02480	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FYK34_RS02500	COG0174	glutamine synthetase
FYK34_RS02515	COG2957	Belongs to the agmatine deiminase family
FYK34_RS02520	COG0583	DNA-binding transcription factor activity
FYK34_RS02525	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYK34_RS02540	COG2095	MarC family integral membrane protein
FYK34_RS02545	COG2217	Heavy metal translocating P-type atpase
FYK34_RS02565	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYK34_RS02570	COG1393	Belongs to the ArsC family
FYK34_RS02580	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS02585	COG0779	Required for maturation of 30S ribosomal subunits
FYK34_RS02590	COG2251	uridine kinase activity
FYK34_RS02590	COG0195	Participates in both transcription termination and antitermination
FYK34_RS02595	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FYK34_RS02600	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FYK34_RS02605	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FYK34_RS02610	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FYK34_RS02615	COG1185	polyribonucleotide nucleotidyltransferase activity
FYK34_RS02635	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS02640	COG3433	isochorismatase activity
FYK34_RS02640	COG1535	isochorismatase
FYK34_RS02645	COG1021	2,3-dihydroxybenzoate-AMP ligase
FYK34_RS02650	COG1169	isochorismate synthase
FYK34_RS02655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYK34_RS02660	COG1120	ATPase activity
FYK34_RS02665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYK34_RS02680	COG4771	TonB-dependent receptor
FYK34_RS02695	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYK34_RS02710	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS02715	COG3724	N-succinylarginine dihydrolase activity
FYK34_RS02720	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYK34_RS02745	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYK34_RS02760	COG1785	Belongs to the alkaline phosphatase family
FYK34_RS02770	COG1643	Atp-dependent helicase
FYK34_RS02780	COG4585	Histidine kinase
FYK34_RS02785	COG4585	Histidine kinase
FYK34_RS02790	COG2197	response regulator
FYK34_RS02805	COG0561	phosphatase activity
FYK34_RS02815	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYK34_RS02835	COG0697	spore germination
FYK34_RS02905	COG2755	lipolytic protein G-D-S-L family
FYK34_RS02910	COG0778	Nitroreductase
FYK34_RS02915	COG1797	cobyrinic acid a,c-diamide synthase activity
FYK34_RS02925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYK34_RS02935	COG1120	ATPase activity
FYK34_RS02965	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
FYK34_RS02970	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
FYK34_RS02995	COG3411	Ferredoxin
FYK34_RS03000	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FYK34_RS03010	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
FYK34_RS03015	COG1492	cobalamin metabolic process
FYK34_RS03025	COG5001	Diguanylate cyclase
FYK34_RS03025	COG3300	MHYT domain
FYK34_RS03045	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYK34_RS03050	COG2860	membrane
FYK34_RS03085	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FYK34_RS03090	COG0534	Mate efflux family protein
FYK34_RS03100	COG0745	RESPONSE REGULATOR receiver
FYK34_RS03105	COG2205	protein histidine kinase activity
FYK34_RS03110	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FYK34_RS03115	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FYK34_RS03120	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FYK34_RS03140	COG0730	response to heat
FYK34_RS03155	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FYK34_RS03165	COG2137	regulation of response to DNA damage stimulus
FYK34_RS03170	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FYK34_RS03175	COG1420	regulation of RNA biosynthetic process
FYK34_RS03180	COG2951	lytic endotransglycosylase activity
FYK34_RS03185	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYK34_RS03190	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FYK34_RS03195	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FYK34_RS03220	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FYK34_RS03225	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FYK34_RS03225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYK34_RS03260	COG0243	molybdopterin cofactor binding
FYK34_RS03270	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FYK34_RS03280	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYK34_RS03285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYK34_RS03290	COG1538	Outer membrane efflux protein
FYK34_RS03310	COG0604	alcohol dehydrogenase
FYK34_RS03315	COG0583	DNA-binding transcription factor activity
FYK34_RS03320	COG0617	tRNA 3'-terminal CCA addition
FYK34_RS03335	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYK34_RS03340	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYK34_RS03345	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FYK34_RS03355	COG1280	lysine exporter protein (LysE YggA)
FYK34_RS03370	COG0737	Belongs to the 5'-nucleotidase family
FYK34_RS03385	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FYK34_RS03410	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYK34_RS03415	COG0443	Heat shock 70 kDa protein
FYK34_RS03420	COG0484	heat shock protein binding
FYK34_RS03445	COG1063	alcohol dehydrogenase
FYK34_RS03450	COG0840	transmembrane signaling receptor activity
FYK34_RS03455	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
FYK34_RS03460	COG0752	glycyl-tRNA synthetase alpha subunit
FYK34_RS03475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYK34_RS03500	COG1966	Carbon starvation protein
FYK34_RS03505	COG3279	Response regulator of the LytR AlgR family
FYK34_RS03510	COG3275	phosphorelay sensor kinase activity
FYK34_RS03515	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYK34_RS03525	COG0733	neurotransmitter:sodium symporter activity
FYK34_RS03560	COG0840	transmembrane signaling receptor activity
FYK34_RS03565	COG3842	ATPase activity
FYK34_RS03595	COG0252	asparaginase activity
FYK34_RS03615	COG0613	PHP domain protein
FYK34_RS03620	COG0009	L-threonylcarbamoyladenylate synthase
FYK34_RS03630	COG1994	Peptidase M50
FYK34_RS03635	COG0180	Tryptophanyl-tRNA synthetase
FYK34_RS03645	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FYK34_RS03655	COG1558	bacterial-type flagellum-dependent cell motility
FYK34_RS03675	COG4786	Flagellar basal body rod
FYK34_RS03680	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FYK34_RS03685	COG1706	bacterial-type flagellum-dependent cell motility
FYK34_RS03695	COG1256	bacterial-type flagellum assembly
FYK34_RS03715	COG1522	sequence-specific DNA binding
FYK34_RS03725	COG0840	transmembrane signaling receptor activity
FYK34_RS03730	COG2205	protein histidine kinase activity
FYK34_RS03730	COG0784	Response regulator, receiver
FYK34_RS03745	COG1136	(ABC) transporter
FYK34_RS03765	COG3275	phosphorelay sensor kinase activity
FYK34_RS03785	COG0659	secondary active sulfate transmembrane transporter activity
FYK34_RS03790	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYK34_RS03800	COG5006	permease, DMT superfamily
FYK34_RS03815	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYK34_RS03840	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FYK34_RS03845	COG1032	radical SAM domain protein
FYK34_RS03860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYK34_RS03865	COG0205	6-phosphofructokinase activity
FYK34_RS03870	COG0215	cysteine-tRNA ligase activity
FYK34_RS03875	COG0254	rRNA binding
FYK34_RS03890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYK34_RS03910	COG4770	biotin carboxylase activity
FYK34_RS03915	COG1024	Enoyl-CoA hydratase
FYK34_RS03920	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYK34_RS03935	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS03945	COG1671	Belongs to the UPF0178 family
FYK34_RS03985	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYK34_RS03985	COG1017	nitric oxide dioxygenase activity
FYK34_RS03990	COG0625	glutathione transferase activity
FYK34_RS03995	COG1846	Transcriptional regulator
FYK34_RS04000	COG0697	spore germination
FYK34_RS04005	COG0456	acetyltransferase
FYK34_RS04035	COG2226	methyltransferase
FYK34_RS04045	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS04050	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYK34_RS04055	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS04095	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS04105	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS04110	COG3318	Belongs to the UPF0149 family
FYK34_RS04110	COG3012	SEC-C Motif Domain Protein
FYK34_RS04115	COG1979	alcohol dehydrogenase
FYK34_RS04120	COG3069	C4-dicarboxylate transmembrane transporter activity
FYK34_RS04135	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS04155	COG2766	serine protein kinase
FYK34_RS04160	COG2718	Belongs to the UPF0229 family
FYK34_RS04165	COG2719	SpoVR family
FYK34_RS04175	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FYK34_RS04180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYK34_RS04185	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FYK34_RS04190	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYK34_RS04200	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FYK34_RS04205	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FYK34_RS04215	COG0167	dihydroorotate dehydrogenase activity
FYK34_RS04250	COG1530	ribonuclease E activity
FYK34_RS04260	COG0671	phosphoesterase, PA-phosphatase related
FYK34_RS04265	COG3681	Belongs to the UPF0597 family
FYK34_RS04270	COG0583	DNA-binding transcription factor activity
FYK34_RS04275	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYK34_RS04280	COG4208	sulfate ABC transporter
FYK34_RS04285	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FYK34_RS04290	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FYK34_RS04310	COG3454	Phosphonate metabolism
FYK34_RS04315	COG4778	phosphonate C-P lyase system protein PhnL
FYK34_RS04320	COG4107	phosphonate C-P lyase system protein PhnK
FYK34_RS04325	COG3627	carbon phosphorus lyase activity
FYK34_RS04330	COG3626	phosphonate metabolism
FYK34_RS04335	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FYK34_RS04340	COG3624	Phosphonate C-P lyase system protein PhnG
FYK34_RS04345	COG2188	Transcriptional regulator
FYK34_RS04350	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FYK34_RS04355	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FYK34_RS04370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS04370	COG2205	protein histidine kinase activity
FYK34_RS04380	COG1840	ABC-type Fe3 transport system, periplasmic component
FYK34_RS04385	COG3842	ATPase activity
FYK34_RS04415	COG5433	transposase activity
FYK34_RS04575	COG3938	Belongs to the proline racemase family
FYK34_RS04580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYK34_RS04605	COG5433	transposase activity
FYK34_RS04620	COG2814	Major facilitator Superfamily
FYK34_RS04640	COG1131	(ABC) transporter
FYK34_RS04655	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYK34_RS04660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYK34_RS04700	COG1047	Peptidyl-prolyl cis-trans
FYK34_RS04720	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYK34_RS04730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYK34_RS04735	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYK34_RS04740	COG0840	transmembrane signaling receptor activity
FYK34_RS04765	COG1802	Transcriptional regulator
FYK34_RS04795	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FYK34_RS04800	COG0788	formyltetrahydrofolate deformylase activity
FYK34_RS04815	COG1968	undecaprenyl-diphosphatase activity
FYK34_RS04825	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYK34_RS04830	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FYK34_RS04835	COG1376	ErfK ybiS ycfS ynhG family protein
FYK34_RS04840	COG2873	o-acetylhomoserine
FYK34_RS04850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYK34_RS04860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYK34_RS04870	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYK34_RS04910	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FYK34_RS04910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYK34_RS04920	COG0542	response to heat
FYK34_RS04925	COG2818	Glycosylase
FYK34_RS04930	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
FYK34_RS04935	COG0745	RESPONSE REGULATOR receiver
FYK34_RS04945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS04945	COG2205	protein histidine kinase activity
FYK34_RS04950	COG2833	Protein of unknown function (DUF455)
FYK34_RS04965	COG0826	peptidase U32
FYK34_RS04975	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYK34_RS04980	COG1177	transmembrane transport
FYK34_RS04985	COG0018	arginyl-trna synthetase
FYK34_RS05000	COG4771	TonB-dependent receptor
FYK34_RS05040	COG0747	negative chemotaxis
FYK34_RS05060	COG4206	TonB-dependent receptor
FYK34_RS05085	COG3590	peptidase
FYK34_RS05105	COG1199	ATP-dependent helicase activity
FYK34_RS05115	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYK34_RS05120	COG0137	argininosuccinate synthase activity
FYK34_RS05145	COG5433	transposase activity
FYK34_RS05160	COG1280	lysine exporter protein (LysE YggA)
FYK34_RS05165	COG1666	GTP binding
FYK34_RS05170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYK34_RS05185	COG2828	Protein conserved in bacteria
FYK34_RS05190	COG2852	Protein conserved in bacteria
FYK34_RS05225	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYK34_RS05235	COG0481	GTPase activity
FYK34_RS05250	COG0571	ribonuclease III activity
FYK34_RS05255	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FYK34_RS05265	COG1381	Involved in DNA repair and RecF pathway recombination
FYK34_RS05270	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYK34_RS05275	COG0736	holo-[acyl-carrier-protein] synthase activity
FYK34_RS05280	COG1472	Belongs to the glycosyl hydrolase 3 family
FYK34_RS05305	COG0488	(ABC) transporter
FYK34_RS05310	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FYK34_RS05315	COG1765	OsmC-like protein
FYK34_RS05340	COG0840	transmembrane signaling receptor activity
FYK34_RS05350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYK34_RS05355	COG0488	(ABC) transporter
FYK34_RS05365	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FYK34_RS05370	COG0625	glutathione transferase activity
FYK34_RS05385	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYK34_RS05390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYK34_RS05395	COG0833	amino acid
FYK34_RS05400	COG2095	MarC family integral membrane protein
FYK34_RS05405	COG1454	alcohol dehydrogenase
FYK34_RS05425	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS05440	COG1024	Enoyl-CoA hydratase
FYK34_RS05440	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYK34_RS05445	COG0183	Belongs to the thiolase family
FYK34_RS05465	COG1752	Esterase of the alpha-beta hydrolase superfamily
FYK34_RS05470	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FYK34_RS05475	COG5380	lipid catabolic process
FYK34_RS05480	COG0134	indole-3-glycerol-phosphate synthase activity
FYK34_RS05510	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS05515	COG0583	DNA-binding transcription factor activity
FYK34_RS05525	COG1309	transcriptional regulator
FYK34_RS05545	COG2195	Cleaves the N-terminal amino acid of tripeptides
FYK34_RS05555	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FYK34_RS05560	COG0142	geranyltranstransferase activity
FYK34_RS05565	COG1722	exodeoxyribonuclease VII activity
FYK34_RS05570	COG0300	oxidoreductase activity
FYK34_RS05575	COG4166	transmembrane transport
FYK34_RS05585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYK34_RS05595	COG0583	DNA-binding transcription factor activity
FYK34_RS05615	COG1215	transferase activity, transferring glycosyl groups
FYK34_RS05620	COG1215	transferase activity, transferring glycosyl groups
FYK34_RS05625	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FYK34_RS05635	COG0457	Tetratricopeptide repeat
FYK34_RS05645	COG2194	sulfuric ester hydrolase activity
FYK34_RS05660	COG0525	valine-tRNA ligase activity
FYK34_RS05680	COG0492	ferredoxin-NADP+ reductase activity
FYK34_RS05700	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYK34_RS05720	COG0655	NAD(P)H dehydrogenase (quinone) activity
FYK34_RS05725	COG0789	Transcriptional regulator
FYK34_RS05735	COG0183	Belongs to the thiolase family
FYK34_RS05740	COG3243	poly(R)-hydroxyalkanoic acid synthase
FYK34_RS05745	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYK34_RS05750	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FYK34_RS05780	COG0840	transmembrane signaling receptor activity
FYK34_RS05785	COG1988	membrane-bound metal-dependent
FYK34_RS05795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYK34_RS05800	COG1131	(ABC) transporter
FYK34_RS05805	COG0842	Transport permease protein
FYK34_RS05810	COG0842	Transport permease protein
FYK34_RS05820	COG0534	Mate efflux family protein
FYK34_RS05830	COG5433	transposase activity
FYK34_RS05840	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FYK34_RS05845	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FYK34_RS05850	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FYK34_RS05855	COG3383	formate dehydrogenase (NAD+) activity
FYK34_RS05860	COG1941	NADH ubiquinone oxidoreductase 20 kDa subunit
FYK34_RS05865	COG3259	Nickel-dependent hydrogenase
FYK34_RS05875	COG0375	protein maturation
FYK34_RS05895	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FYK34_RS05905	COG0582	viral genome integration into host DNA
FYK34_RS05960	COG2201	protein-glutamate methylesterase activity
FYK34_RS05965	COG3706	GGDEF domain
FYK34_RS05980	COG0546	phosphoglycolate phosphatase activity
FYK34_RS05985	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS05990	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYK34_RS05995	COG2967	ApaG domain
FYK34_RS06000	COG5265	(ABC) transporter
FYK34_RS06010	COG0346	lactoylglutathione lyase activity
FYK34_RS06025	COG1418	mRNA catabolic process
FYK34_RS06060	COG1115	amino acid carrier protein
FYK34_RS06065	COG3707	response regulator
FYK34_RS06070	COG1116	anion transmembrane transporter activity
FYK34_RS06070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYK34_RS06075	COG2223	nitrite transmembrane transporter activity
FYK34_RS06080	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FYK34_RS06090	COG0243	molybdopterin cofactor binding
FYK34_RS06105	COG4774	siderophore transport
FYK34_RS06125	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FYK34_RS06225	COG0326	Molecular chaperone. Has ATPase activity
FYK34_RS06240	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYK34_RS06270	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FYK34_RS06275	COG0739	heme binding
FYK34_RS06295	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYK34_RS06300	COG1744	ABC transporter substrate-binding protein PnrA-like
FYK34_RS06315	COG0602	queuosine metabolic process
FYK34_RS06325	COG2814	Major facilitator Superfamily
FYK34_RS06340	COG0052	Belongs to the universal ribosomal protein uS2 family
FYK34_RS06345	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FYK34_RS06350	COG0528	UMP kinase activity
FYK34_RS06355	COG0233	cytoplasmic translational termination
FYK34_RS06360	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYK34_RS06365	COG0575	Belongs to the CDS family
FYK34_RS06370	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FYK34_RS06385	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FYK34_RS06390	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYK34_RS06395	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FYK34_RS06400	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYK34_RS06405	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYK34_RS06410	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FYK34_RS06430	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FYK34_RS06460	COG3706	GGDEF domain
FYK34_RS06460	COG2203	Gaf domain
FYK34_RS06460	COG4251	negative regulation of phosphorylation
FYK34_RS06460	COG5001	Diguanylate cyclase
FYK34_RS06475	COG4221	oxidoreductase activity
FYK34_RS06490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYK34_RS06495	COG0784	Response regulator, receiver
FYK34_RS06495	COG2205	protein histidine kinase activity
FYK34_RS06495	COG5002	protein histidine kinase activity
FYK34_RS06500	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYK34_RS06510	COG0544	peptidyl-prolyl cis-trans isomerase activity
FYK34_RS06515	COG0740	serine-type endopeptidase activity
FYK34_RS06520	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FYK34_RS06525	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYK34_RS06545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYK34_RS06550	COG0583	DNA-binding transcription factor activity
FYK34_RS06570	COG2995	paraquat-inducible protein a
FYK34_RS06575	COG3008	intermembrane lipid transfer
FYK34_RS06590	COG0443	Heat shock 70 kDa protein
FYK34_RS06620	COG3568	Endonuclease Exonuclease Phosphatase
FYK34_RS06625	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYK34_RS06630	COG2011	ABC-type metal ion transport system permease component
FYK34_RS06655	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FYK34_RS06665	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYK34_RS06675	COG0175	sulfate reduction
FYK34_RS06680	COG2895	sulfate adenylyltransferase (ATP) activity
FYK34_RS06725	COG0625	glutathione transferase activity
FYK34_RS06735	COG1187	pseudouridine synthase activity
FYK34_RS06755	COG0583	DNA-binding transcription factor activity
FYK34_RS06760	COG0038	chloride channel
FYK34_RS06770	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FYK34_RS06780	COG0024	Methionine aminopeptidase
FYK34_RS06795	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYK34_RS06820	COG3411	Ferredoxin
FYK34_RS06830	COG2081	HI0933 family
FYK34_RS06835	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYK34_RS06850	COG1286	toxin biosynthetic process
FYK34_RS06860	COG0285	dihydrofolate synthase activity
FYK34_RS06875	COG0488	(ABC) transporter
FYK34_RS06890	COG0791	NLP P60 protein
FYK34_RS06895	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FYK34_RS06910	COG0697	spore germination
FYK34_RS06915	COG1763	Mo-molybdopterin cofactor biosynthetic process
FYK34_RS06920	COG0545	Peptidyl-prolyl cis-trans isomerase
FYK34_RS06930	COG0302	gtp cyclohydrolase
FYK34_RS06935	COG2070	2-Nitropropane dioxygenase
FYK34_RS06940	COG1573	uracil-dna glycosylase
FYK34_RS06975	COG0628	permease
FYK34_RS06985	COG0303	'Molybdopterin
FYK34_RS06990	COG1079	Belongs to the binding-protein-dependent transport system permease family
FYK34_RS06995	COG4603	Belongs to the binding-protein-dependent transport system permease family
FYK34_RS07000	COG3845	ABC transporter
FYK34_RS07005	COG1744	ABC transporter substrate-binding protein PnrA-like
FYK34_RS07015	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYK34_RS07025	COG1435	thymidine kinase activity
FYK34_RS07060	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FYK34_RS07075	COG2378	regulation of single-species biofilm formation
FYK34_RS07080	COG0024	Methionine aminopeptidase
FYK34_RS07095	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYK34_RS07115	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYK34_RS07120	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYK34_RS07130	COG4566	intracellular signal transduction
FYK34_RS07135	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYK34_RS07140	COG0497	DNA recombination
FYK34_RS07150	COG1674	ftsk spoiiie
FYK34_RS07155	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FYK34_RS07165	COG1024	Enoyl-CoA hydratase
FYK34_RS07190	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FYK34_RS07220	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYK34_RS07230	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYK34_RS07235	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FYK34_RS07250	COG0307	riboflavin synthase, alpha
FYK34_RS07255	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FYK34_RS07285	COG0733	neurotransmitter:sodium symporter activity
FYK34_RS07290	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYK34_RS07320	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYK34_RS07325	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FYK34_RS07335	COG0166	Belongs to the GPI family
FYK34_RS07340	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FYK34_RS07345	COG0501	Belongs to the peptidase M48B family
FYK34_RS07350	COG2154	pterin-4-alpha-carbinolamine dehydratase
FYK34_RS07360	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS07365	COG1956	GAF domain-containing protein
FYK34_RS07370	COG1217	gtp-binding protein TYPA
FYK34_RS07385	COG1063	alcohol dehydrogenase
FYK34_RS07390	COG2217	Heavy metal translocating P-type atpase
FYK34_RS07400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYK34_RS07410	COG2205	protein histidine kinase activity
FYK34_RS07415	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYK34_RS07420	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYK34_RS07420	COG0678	peroxiredoxin activity
FYK34_RS07425	COG0346	lactoylglutathione lyase activity
FYK34_RS07430	COG0739	heme binding
FYK34_RS07430	COG1196	nuclear chromosome segregation
FYK34_RS07430	COG0741	lytic transglycosylase activity
FYK34_RS07440	COG0617	tRNA 3'-terminal CCA addition
FYK34_RS07445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYK34_RS07460	COG1360	Flagellar Motor Protein
FYK34_RS07475	COG0174	glutamine synthetase
FYK34_RS07480	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FYK34_RS07485	COG0686	Belongs to the AlaDH PNT family
FYK34_RS07490	COG1396	sequence-specific DNA binding
FYK34_RS07490	COG1917	Cupin 2, conserved barrel domain protein
FYK34_RS07500	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS07515	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FYK34_RS07530	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FYK34_RS07535	COG0583	DNA-binding transcription factor activity
FYK34_RS07550	COG0583	DNA-binding transcription factor activity
FYK34_RS07555	COG1473	amidohydrolase
FYK34_RS07570	COG2860	membrane
FYK34_RS07630	COG1695	Transcriptional regulator
FYK34_RS07645	COG0583	DNA-binding transcription factor activity
FYK34_RS07650	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYK34_RS07655	COG3002	Belongs to the UPF0753 family
FYK34_RS07665	COG0009	L-threonylcarbamoyladenylate synthase
FYK34_RS07710	COG0582	viral genome integration into host DNA
FYK34_RS07795	COG2974	May be involved in recombination
FYK34_RS07915	COG1802	Transcriptional regulator
FYK34_RS07915	COG4626	Terminase
FYK34_RS08045	COG1278	Cold shock
FYK34_RS08050	COG0512	Glutamine amidotransferase of anthranilate synthase
FYK34_RS08060	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYK34_RS08080	COG0529	Catalyzes the synthesis of activated sulfate
FYK34_RS08090	COG1473	amidohydrolase
FYK34_RS08105	COG0124	histidyl-tRNA synthetase
FYK34_RS08110	COG0312	modulator of DNA gyrase
FYK34_RS08125	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FYK34_RS08140	COG0859	PFAM glycosyl transferase family 9
FYK34_RS08145	COG1309	transcriptional regulator
FYK34_RS08160	COG0183	Belongs to the thiolase family
FYK34_RS08170	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYK34_RS08185	COG1024	Enoyl-CoA hydratase
FYK34_RS08190	COG1024	Enoyl-CoA hydratase
FYK34_RS08215	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FYK34_RS08220	COG0159	tryptophan synthase activity
FYK34_RS08225	COG0133	tryptophan synthase activity
FYK34_RS08230	COG0135	phosphoribosylanthranilate isomerase activity
FYK34_RS08235	COG0101	tRNA pseudouridine synthase activity
FYK34_RS08260	COG0473	3-isopropylmalate dehydrogenase activity
FYK34_RS08270	COG0066	3-isopropylmalate dehydratase activity
FYK34_RS08280	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYK34_RS08300	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYK34_RS08305	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FYK34_RS08325	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYK34_RS08340	COG1979	alcohol dehydrogenase
FYK34_RS08345	COG2207	Transcriptional regulator
FYK34_RS08355	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYK34_RS08360	COG0513	Belongs to the DEAD box helicase family
FYK34_RS08365	COG0727	PFAM Uncharacterised protein family (UPF0153)
FYK34_RS08370	COG0493	'glutamate synthase
FYK34_RS08380	COG0513	Belongs to the DEAD box helicase family
FYK34_RS08390	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYK34_RS08395	COG3258	Cytochrome c
FYK34_RS08400	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYK34_RS08415	COG1760	l-serine dehydratase
FYK34_RS08420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYK34_RS08425	COG1166	arginine decarboxylase activity
FYK34_RS08435	COG2988	succinylglutamate desuccinylase activity
FYK34_RS08440	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYK34_RS08445	COG1256	bacterial-type flagellum assembly
FYK34_RS08450	COG1705	Flagellar rod assembly protein muramidase FlgJ
FYK34_RS08450	COG3951	Flagellar rod assembly protein muramidase FlgJ
FYK34_RS08455	COG1706	bacterial-type flagellum-dependent cell motility
FYK34_RS08460	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FYK34_RS08480	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FYK34_RS08490	COG1815	bacterial-type flagellum-dependent cell motility
FYK34_RS08500	COG4989	oxidoreductase activity
FYK34_RS08510	COG2200	EAL domain
FYK34_RS08515	COG0513	Belongs to the DEAD box helicase family
FYK34_RS08525	COG1940	carbohydrate kinase activity
FYK34_RS08525	COG1846	Transcriptional regulator
FYK34_RS08545	COG0395	ABC-type sugar transport system, permease component
FYK34_RS08555	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FYK34_RS08560	COG0477	Major facilitator Superfamily
FYK34_RS08575	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYK34_RS08580	COG2816	NAD+ diphosphatase activity
FYK34_RS08600	COG0582	viral genome integration into host DNA
FYK34_RS08615	COG1309	transcriptional regulator
FYK34_RS08635	COG2814	Major facilitator Superfamily
FYK34_RS08640	COG0840	transmembrane signaling receptor activity
FYK34_RS08645	COG5001	Diguanylate cyclase
FYK34_RS08645	COG3300	MHYT domain
FYK34_RS08660	COG3008	intermembrane lipid transfer
FYK34_RS08660	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYK34_RS08665	COG2995	paraquat-inducible protein a
FYK34_RS08680	COG1309	transcriptional regulator
FYK34_RS08690	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS08730	COG2096	Adenosyltransferase
FYK34_RS08745	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FYK34_RS08755	COG0795	lipopolysaccharide-transporting ATPase activity
FYK34_RS08760	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FYK34_RS08790	COG0516	GMP reductase activity
FYK34_RS08800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYK34_RS08810	COG1739	Uncharacterized protein family UPF0029
FYK34_RS08825	COG2917	probably involved in intracellular septation
FYK34_RS08830	COG2350	Protein conserved in bacteria
FYK34_RS08840	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYK34_RS08845	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYK34_RS08850	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYK34_RS08875	COG0121	glutamine amidotransferase
FYK34_RS08895	COG0842	Transport permease protein
FYK34_RS08905	COG1131	(ABC) transporter
FYK34_RS08935	COG4580	involved in the transport of maltose and maltodextrins
FYK34_RS08940	COG0366	Alpha amylase catalytic
FYK34_RS08945	COG3842	ATPase activity
FYK34_RS08955	COG1175	transmembrane transport
FYK34_RS08960	COG3833	ABC-type maltose transport systems, permease component
FYK34_RS09005	COG1609	Transcriptional regulator
FYK34_RS09010	COG3265	gluconokinase activity
FYK34_RS09015	COG2271	Major facilitator Superfamily
FYK34_RS09030	COG4566	intracellular signal transduction
FYK34_RS09035	COG3264	Mechanosensitive ion channel
FYK34_RS09035	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FYK34_RS09040	COG1136	(ABC) transporter
FYK34_RS09055	COG0791	NLP P60 protein
FYK34_RS09070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS09090	COG1595	DNA-templated transcription, initiation
FYK34_RS09105	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS09110	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
FYK34_RS09115	COG1562	ergosterol biosynthetic process
FYK34_RS09120	COG1562	ergosterol biosynthetic process
FYK34_RS09175	COG1360	Flagellar Motor Protein
FYK34_RS09180	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FYK34_RS09185	COG1191	sigma factor activity
FYK34_RS09240	COG1677	Flagellar hook-basal body complex protein FliE
FYK34_RS09260	COG1987	bacterial-type flagellum assembly
FYK34_RS09270	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYK34_RS09285	COG2205	protein histidine kinase activity
FYK34_RS09285	COG0784	Response regulator, receiver
FYK34_RS09300	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYK34_RS09325	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYK34_RS09335	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYK34_RS09340	COG3383	formate dehydrogenase (NAD+) activity
FYK34_RS09345	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYK34_RS09350	COG0375	protein maturation
FYK34_RS09360	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FYK34_RS09390	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYK34_RS09395	COG0651	ATP synthesis coupled electron transport
FYK34_RS09400	COG0650	Formate hydrogenlyase subunit 4
FYK34_RS09405	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYK34_RS09410	COG4237	Hydrogenase 4 membrane
FYK34_RS09415	COG0651	ATP synthesis coupled electron transport
FYK34_RS09420	COG3261	NADH dehydrogenase
FYK34_RS09420	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FYK34_RS09425	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS09430	COG3260	NADH ubiquinone oxidoreductase 20
FYK34_RS09440	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYK34_RS09450	COG0625	glutathione transferase activity
FYK34_RS09470	COG1620	l-lactate permease
FYK34_RS09475	COG0277	FAD linked oxidase domain protein
FYK34_RS09480	COG1139	Iron-sulfur cluster binding protein
FYK34_RS09490	COG0247	lactate metabolic process
FYK34_RS09500	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYK34_RS09505	COG0798	PFAM Bile acid sodium symporter
FYK34_RS09510	COG0784	Response regulator, receiver
FYK34_RS09510	COG0835	chemotaxis
FYK34_RS09520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYK34_RS09530	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FYK34_RS09540	COG0284	orotidine-5'-phosphate decarboxylase activity
FYK34_RS09545	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYK34_RS09555	COG0776	regulation of translation
FYK34_RS09565	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FYK34_RS09570	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FYK34_RS09580	COG3038	cytochrome b561
FYK34_RS09585	COG1609	Transcriptional regulator
FYK34_RS09590	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYK34_RS09590	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYK34_RS09595	COG1105	Belongs to the carbohydrate kinase PfkB family
FYK34_RS09600	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYK34_RS09600	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYK34_RS09620	COG0583	DNA-binding transcription factor activity
FYK34_RS09625	COG1024	Enoyl-CoA hydratase
FYK34_RS09640	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYK34_RS09655	COG0523	cobalamin synthesis protein
FYK34_RS09660	COG0735	belongs to the Fur family
FYK34_RS09680	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FYK34_RS09690	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYK34_RS09720	COG2003	Belongs to the UPF0758 family
FYK34_RS09725	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYK34_RS09730	COG0756	dUTP diphosphatase activity
FYK34_RS09735	COG0737	Belongs to the 5'-nucleotidase family
FYK34_RS09735	COG4085	toxin activity
FYK34_RS09735	COG1525	nuclease
FYK34_RS09740	COG2902	Dehydrogenase
FYK34_RS09745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS09750	COG4215	(ABC) transporter
FYK34_RS09765	COG4191	Histidine kinase
FYK34_RS09800	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYK34_RS09805	COG1686	Belongs to the peptidase S11 family
FYK34_RS09810	COG2921	Belongs to the UPF0250 family
FYK34_RS09815	COG0321	lipoyl(octanoyl) transferase activity
FYK34_RS09820	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FYK34_RS09845	COG0028	Belongs to the TPP enzyme family
FYK34_RS09850	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
FYK34_RS09865	COG2826	transposase and inactivated derivatives, IS30 family
FYK34_RS09890	COG0501	Belongs to the peptidase M48B family
FYK34_RS09895	COG0583	DNA-binding transcription factor activity
FYK34_RS09940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYK34_RS09945	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYK34_RS09950	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYK34_RS09955	COG0006	proline dipeptidase activity
FYK34_RS09960	COG0217	transcriptional regulatory protein
FYK34_RS09965	COG1684	flagellar biosynthetic protein fliR
FYK34_RS10015	COG1157	protein secretion by the type III secretion system
FYK34_RS10030	COG1766	The M ring may be actively involved in energy transduction
FYK34_RS10035	COG1677	Flagellar hook-basal body complex protein FliE
FYK34_RS10050	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYK34_RS10055	COG0583	DNA-binding transcription factor activity
FYK34_RS10065	COG0556	nucleotide-excision repair
FYK34_RS10070	COG1686	Belongs to the peptidase S11 family
FYK34_RS10080	COG1881	PFAM PEBP family protein
FYK34_RS10085	COG2207	Transcriptional regulator
FYK34_RS10090	COG3842	ATPase activity
FYK34_RS10120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS10135	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYK34_RS10140	COG1984	allophanate hydrolase subunit 2
FYK34_RS10145	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FYK34_RS10160	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FYK34_RS10165	COG3186	Phenylalanine-4-hydroxylase
FYK34_RS10175	COG2067	long-chain fatty acid transport protein
FYK34_RS10190	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYK34_RS10200	COG4946	Tricorn protease homolog
FYK34_RS10200	COG0823	Involved in the tonB-independent uptake of proteins
FYK34_RS10200	COG1506	peptidase
FYK34_RS10220	COG1335	isochorismatase
FYK34_RS10225	COG0037	tRNA processing
FYK34_RS10230	COG0825	malonyl-CoA metabolic process
FYK34_RS10300	COG4251	negative regulation of phosphorylation
FYK34_RS10300	COG2203	Gaf domain
FYK34_RS10300	COG5001	Diguanylate cyclase
FYK34_RS10300	COG3706	GGDEF domain
FYK34_RS10305	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FYK34_RS10320	COG3145	DNA-N1-methyladenine dioxygenase activity
FYK34_RS10325	COG0312	modulator of DNA gyrase
FYK34_RS10330	COG3028	Belongs to the UPF0307 family
FYK34_RS10335	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYK34_RS10340	COG0429	hydrolase of the alpha beta-hydrolase fold
FYK34_RS10365	COG2198	Histidine kinase
FYK34_RS10365	COG0643	Histidine kinase
FYK34_RS10370	COG1278	Cold shock
FYK34_RS10400	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYK34_RS10415	COG3118	belongs to the thioredoxin family
FYK34_RS10430	COG2239	Acts as a magnesium transporter
FYK34_RS10435	COG3437	response regulator, receiver
FYK34_RS10450	COG3291	Pkd domain containing protein
FYK34_RS10545	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYK34_RS10570	COG0644	oxidoreductase
FYK34_RS10580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYK34_RS10585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYK34_RS10590	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
FYK34_RS10595	COG1231	oxidoreductase activity
FYK34_RS10605	COG2353	YceI-like domain
FYK34_RS10615	COG3038	cytochrome b561
FYK34_RS10630	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYK34_RS10635	COG3162	membrane
FYK34_RS10640	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYK34_RS10645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYK34_RS10655	COG0500	methyltransferase
FYK34_RS10680	COG0583	DNA-binding transcription factor activity
FYK34_RS10685	COG2878	Part of a membrane complex involved in electron transport
FYK34_RS10690	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYK34_RS10695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYK34_RS10705	COG0531	amino acid
FYK34_RS10720	COG0366	Alpha amylase catalytic
FYK34_RS10725	COG1263	PTS System
FYK34_RS10725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYK34_RS10735	COG2188	Transcriptional regulator
FYK34_RS10740	COG0583	DNA-binding transcription factor activity
FYK34_RS10745	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYK34_RS10755	COG0625	glutathione transferase activity
FYK34_RS10775	COG4319	ketosteroid isomerase
FYK34_RS10785	COG2841	Protein conserved in bacteria
FYK34_RS10795	COG0330	HflC and HflK could
FYK34_RS10800	COG0330	HflC and HflK could
FYK34_RS10810	COG0861	Integral membrane protein TerC family
FYK34_RS10845	COG0745	RESPONSE REGULATOR receiver
FYK34_RS10855	COG2198	Histidine kinase
FYK34_RS10855	COG0643	Histidine kinase
FYK34_RS10865	COG0840	transmembrane signaling receptor activity
FYK34_RS10880	COG2198	Histidine kinase
FYK34_RS10880	COG0784	Response regulator, receiver
FYK34_RS10880	COG5002	protein histidine kinase activity
FYK34_RS10885	COG5002	protein histidine kinase activity
FYK34_RS10885	COG2205	protein histidine kinase activity
FYK34_RS10885	COG0784	Response regulator, receiver
FYK34_RS10890	COG3437	response regulator, receiver
FYK34_RS10895	COG0642	Histidine kinase
FYK34_RS10915	COG0671	phosphoesterase, PA-phosphatase related
FYK34_RS10980	COG4974	Belongs to the 'phage' integrase family
FYK34_RS11025	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYK34_RS11040	COG1137	ATPase activity
FYK34_RS11045	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYK34_RS11050	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYK34_RS11060	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FYK34_RS11065	COG1660	Displays ATPase and GTPase activities
FYK34_RS11070	COG0163	prenyltransferase activity
FYK34_RS11075	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYK34_RS11075	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FYK34_RS11085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS11085	COG4191	Histidine kinase
FYK34_RS11090	COG3437	response regulator, receiver
FYK34_RS11090	COG0784	Response regulator, receiver
FYK34_RS11095	COG1272	protein, Hemolysin III
FYK34_RS11100	COG0563	adenylate kinase activity
FYK34_RS11105	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FYK34_RS11110	COG2835	tetraacyldisaccharide 4'-kinase activity
FYK34_RS11115	COG1663	tetraacyldisaccharide 4'-kinase activity
FYK34_RS11120	COG0848	biopolymer transport protein
FYK34_RS11125	COG0811	peptide transport
FYK34_RS11140	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FYK34_RS11150	COG0793	Belongs to the peptidase S41A family
FYK34_RS11155	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYK34_RS11155	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYK34_RS11160	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FYK34_RS11175	COG0488	(ABC) transporter
FYK34_RS11195	COG0861	Integral membrane protein TerC family
FYK34_RS11215	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FYK34_RS11220	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYK34_RS11225	COG1053	succinate dehydrogenase
FYK34_RS11230	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FYK34_RS11235	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FYK34_RS11250	COG0850	regulation of cytokinetic process
FYK34_RS11260	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FYK34_RS11265	COG0583	DNA-binding transcription factor activity
FYK34_RS11295	COG2198	Histidine kinase
FYK34_RS11295	COG0643	Histidine kinase
FYK34_RS11320	COG0840	transmembrane signaling receptor activity
FYK34_RS11330	COG0259	pyridoxamine-phosphate oxidase activity
FYK34_RS11370	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FYK34_RS11380	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FYK34_RS11400	COG0251	oxidation-reduction process
FYK34_RS11435	COG0482	sulfurtransferase activity
FYK34_RS11445	COG2814	Major facilitator Superfamily
FYK34_RS11450	COG0583	DNA-binding transcription factor activity
FYK34_RS11455	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS11460	COG0287	Prephenate dehydrogenase
FYK34_RS11480	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYK34_RS11485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYK34_RS11490	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYK34_RS11495	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS11500	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FYK34_RS11505	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYK34_RS11510	COG0416	fatty acid biosynthetic process
FYK34_RS11515	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FYK34_RS11520	COG1399	metal-binding, possibly nucleic acid-binding protein
FYK34_RS11525	COG0424	maF-like protein
FYK34_RS11530	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FYK34_RS11535	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FYK34_RS11555	COG0747	negative chemotaxis
FYK34_RS11560	COG5001	Diguanylate cyclase
FYK34_RS11560	COG3300	MHYT domain
FYK34_RS11565	COG0500	methyltransferase
FYK34_RS11570	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYK34_RS11570	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYK34_RS11575	COG0509	glycine decarboxylation via glycine cleavage system
FYK34_RS11580	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYK34_RS11585	COG0531	amino acid
FYK34_RS11590	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYK34_RS11605	COG3852	Histidine kinase
FYK34_RS11610	COG0835	chemotaxis
FYK34_RS11610	COG0784	Response regulator, receiver
FYK34_RS11615	COG0784	Response regulator, receiver
FYK34_RS11615	COG0835	chemotaxis
FYK34_RS11620	COG0745	RESPONSE REGULATOR receiver
FYK34_RS11625	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FYK34_RS11630	COG2198	Histidine kinase
FYK34_RS11630	COG0784	Response regulator, receiver
FYK34_RS11630	COG0643	Histidine kinase
FYK34_RS11635	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FYK34_RS11645	COG0456	acetyltransferase
FYK34_RS11650	COG1573	uracil-dna glycosylase
FYK34_RS11655	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYK34_RS11660	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FYK34_RS11665	COG0504	CTP synthase activity
FYK34_RS11670	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FYK34_RS11675	COG0148	phosphopyruvate hydratase activity
FYK34_RS11680	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FYK34_RS11690	COG2914	Belongs to the UPF0125 (RnfH) family
FYK34_RS11695	COG2867	negative regulation of translational initiation
FYK34_RS11700	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FYK34_RS11710	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FYK34_RS11710	COG0519	Catalyzes the synthesis of GMP from XMP
FYK34_RS11715	COG0582	viral genome integration into host DNA
FYK34_RS11790	COG0590	tRNA wobble adenosine to inosine editing
FYK34_RS11795	COG1376	ErfK ybiS ycfS ynhG family protein
FYK34_RS11830	COG0415	Belongs to the DNA photolyase family
FYK34_RS11835	COG0583	DNA-binding transcription factor activity
FYK34_RS11860	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYK34_RS11860	COG1017	nitric oxide dioxygenase activity
FYK34_RS11900	COG1309	transcriptional regulator
FYK34_RS11905	COG0778	Nitroreductase
FYK34_RS11910	COG1902	pentaerythritol trinitrate reductase activity
FYK34_RS11915	COG1505	serine-type exopeptidase activity
FYK34_RS11925	COG4251	negative regulation of phosphorylation
FYK34_RS11925	COG2203	Gaf domain
FYK34_RS11925	COG3706	GGDEF domain
FYK34_RS11925	COG5001	Diguanylate cyclase
FYK34_RS11935	COG4104	PAAR repeat-containing protein
FYK34_RS11940	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FYK34_RS11945	COG0720	synthase
FYK34_RS11950	COG0602	queuosine metabolic process
FYK34_RS11965	COG3220	belongs to the UPF0276 family
FYK34_RS11980	COG0560	Phosphoserine phosphatase
FYK34_RS11990	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYK34_RS12015	COG4689	acetoacetate decarboxylase
FYK34_RS12025	COG0673	inositol 2-dehydrogenase activity
FYK34_RS12055	COG0557	exoribonuclease II activity
FYK34_RS12080	COG0477	Major facilitator Superfamily
FYK34_RS12100	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FYK34_RS12105	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FYK34_RS12110	COG0330	HflC and HflK could
FYK34_RS12115	COG0330	HflC and HflK could
FYK34_RS12120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYK34_RS12125	COG1923	regulation of RNA biosynthetic process
FYK34_RS12130	COG1160	GTP binding
FYK34_RS12135	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYK34_RS12145	COG0124	histidyl-tRNA synthetase
FYK34_RS12150	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FYK34_RS12165	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FYK34_RS12170	COG0105	UTP biosynthetic process
FYK34_RS12200	COG2974	May be involved in recombination
FYK34_RS12205	COG3384	dioxygenase
FYK34_RS12210	COG0167	dihydroorotate dehydrogenase activity
FYK34_RS12215	COG2193	ferroxidase activity
FYK34_RS12220	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FYK34_RS12230	COG0717	Belongs to the dCTP deaminase family
FYK34_RS12235	COG0386	Belongs to the glutathione peroxidase family
FYK34_RS12260	COG3012	SEC-C Motif Domain Protein
FYK34_RS12280	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYK34_RS12295	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FYK34_RS12300	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYK34_RS12305	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FYK34_RS12310	COG0196	riboflavin kinase activity
FYK34_RS12335	COG0175	sulfate reduction
FYK34_RS12340	COG0583	DNA-binding transcription factor activity
FYK34_RS12345	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS12350	COG0488	(ABC) transporter
FYK34_RS12355	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYK34_RS12370	COG2850	peptidyl-arginine hydroxylation
FYK34_RS12375	COG1047	Peptidyl-prolyl cis-trans
FYK34_RS12385	COG2239	Acts as a magnesium transporter
FYK34_RS12410	COG4206	TonB-dependent receptor
FYK34_RS12415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYK34_RS12420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FYK34_RS12430	COG0174	glutamine synthetase
FYK34_RS12440	COG3852	Histidine kinase
FYK34_RS12465	COG0583	DNA-binding transcription factor activity
FYK34_RS12470	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FYK34_RS12485	COG1380	Effector of murein hydrolase LrgA
FYK34_RS12490	COG3161	chorismate lyase activity
FYK34_RS12495	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FYK34_RS12510	COG0494	nUDIX hydrolase
FYK34_RS12535	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FYK34_RS12540	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FYK34_RS12550	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYK34_RS12550	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYK34_RS12555	COG0038	chloride channel
FYK34_RS12560	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYK34_RS12565	COG2203	Gaf domain
FYK34_RS12565	COG2199	diguanylate cyclase activity
FYK34_RS12565	COG2200	EAL domain
FYK34_RS12570	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FYK34_RS12590	COG0583	DNA-binding transcription factor activity
FYK34_RS12610	COG1247	-acetyltransferase
FYK34_RS12635	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FYK34_RS12640	COG0456	acetyltransferase
FYK34_RS12645	COG0359	binds to the 23S rRNA
FYK34_RS12650	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYK34_RS12660	COG0360	Binds together with S18 to 16S ribosomal RNA
FYK34_RS12670	COG1937	Protein conserved in bacteria
FYK34_RS12695	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYK34_RS12700	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYK34_RS12710	COG1115	amino acid carrier protein
FYK34_RS12720	COG0584	glycerophosphoryl diester phosphodiesterase
FYK34_RS12725	COG3842	ATPase activity
FYK34_RS12730	COG0395	ABC-type sugar transport system, permease component
FYK34_RS12735	COG1175	transmembrane transport
FYK34_RS12745	COG1294	oxidase, subunit
FYK34_RS12750	COG1271	oxidase subunit
FYK34_RS12765	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FYK34_RS12790	COG0583	DNA-binding transcription factor activity
FYK34_RS12800	COG1278	Cold shock
FYK34_RS12805	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FYK34_RS12810	COG0542	response to heat
FYK34_RS12825	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYK34_RS12830	COG0335	large ribosomal subunit rRNA binding
FYK34_RS12835	COG0336	Belongs to the RNA methyltransferase TrmD family
FYK34_RS12840	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FYK34_RS12845	COG0228	four-way junction DNA binding
FYK34_RS12855	COG1230	cation diffusion facilitator family transporter
FYK34_RS12860	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FYK34_RS12865	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FYK34_RS12870	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYK34_RS12895	COG0714	Associated with various cellular activities
FYK34_RS12900	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYK34_RS12905	COG0681	Belongs to the peptidase S26 family
FYK34_RS12910	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FYK34_RS12930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYK34_RS12940	COG0316	Belongs to the HesB IscA family
FYK34_RS12945	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYK34_RS12950	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FYK34_RS12955	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FYK34_RS12960	COG0813	purine-nucleoside phosphorylase activity
FYK34_RS12965	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FYK34_RS12970	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FYK34_RS12975	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FYK34_RS12980	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYK34_RS12995	COG2095	MarC family integral membrane protein
FYK34_RS13000	COG1301	dicarboxylic acid transport
FYK34_RS13005	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FYK34_RS13015	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FYK34_RS13020	COG0023	Translation Initiation Factor
FYK34_RS13040	COG3045	CreA protein
FYK34_RS13045	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FYK34_RS13045	COG0321	lipoyl(octanoyl) transferase activity
FYK34_RS13055	COG0084	hydrolase, TatD family'
FYK34_RS13070	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYK34_RS13075	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYK34_RS13105	COG2186	Transcriptional regulator
FYK34_RS13110	COG2807	transmembrane transport
FYK34_RS13130	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYK34_RS13135	COG4181	ATPase activity
FYK34_RS13150	COG0450	alkyl hydroperoxide reductase
FYK34_RS13160	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FYK34_RS13175	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYK34_RS13185	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYK34_RS13195	COG0268	Binds directly to 16S ribosomal RNA
FYK34_RS13200	COG0728	peptidoglycan biosynthetic process
FYK34_RS13205	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FYK34_RS13205	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FYK34_RS13215	COG0564	pseudouridine synthase activity
FYK34_RS13220	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FYK34_RS13225	COG3104	oligopeptide transport
FYK34_RS13230	COG0583	DNA-binding transcription factor activity
FYK34_RS13245	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYK34_RS13325	COG4974	Belongs to the 'phage' integrase family
FYK34_RS13330	COG0582	viral genome integration into host DNA
FYK34_RS13365	COG5377	YqaJ viral recombinase family
FYK34_RS13395	COG0789	Transcriptional regulator
FYK34_RS13445	COG1484	DNA-dependent DNA replication
FYK34_RS13455	COG5377	YqaJ viral recombinase family
FYK34_RS13505	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYK34_RS13510	COG0114	fumarate hydratase activity
FYK34_RS13555	COG0346	lactoylglutathione lyase activity
FYK34_RS13560	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYK34_RS13565	COG0798	PFAM Bile acid sodium symporter
FYK34_RS13590	COG1610	YqeY-like protein
FYK34_RS13595	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYK34_RS13600	COG2022	thiamine diphosphate biosynthetic process
FYK34_RS13610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYK34_RS13615	COG1758	RNA polymerase activity
FYK34_RS13620	COG0194	GDP metabolic process
FYK34_RS13625	COG2252	PERMEase
FYK34_RS13630	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FYK34_RS13655	COG1695	Transcriptional regulator
FYK34_RS13675	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYK34_RS13680	COG2235	arginine
FYK34_RS13695	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYK34_RS13695	COG0543	2 iron, 2 sulfur cluster binding
FYK34_RS13705	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FYK34_RS13710	COG0386	Belongs to the glutathione peroxidase family
FYK34_RS13720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYK34_RS13735	COG0586	Pfam SNARE associated Golgi protein
FYK34_RS13740	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYK34_RS13755	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYK34_RS13770	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYK34_RS13775	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FYK34_RS13780	COG1534	Rna-binding protein
FYK34_RS13870	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS13885	COG2030	dehydratase
FYK34_RS13895	COG0802	atpase or kinase
FYK34_RS13900	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYK34_RS13905	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FYK34_RS13910	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FYK34_RS13915	COG0237	dephospho-CoA kinase activity
FYK34_RS13920	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FYK34_RS13940	COG1555	photosystem II stabilization
FYK34_RS13940	COG1596	polysaccharide export
FYK34_RS13945	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYK34_RS13950	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYK34_RS13970	COG0745	RESPONSE REGULATOR receiver
FYK34_RS13975	COG2205	protein histidine kinase activity
FYK34_RS13985	COG3591	Belongs to the peptidase S1B family
FYK34_RS13990	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FYK34_RS13995	COG0631	protein serine/threonine phosphatase activity
FYK34_RS14000	COG0515	serine threonine protein kinase
FYK34_RS14000	COG1357	PFAM Pentapeptide repeats (8 copies)
FYK34_RS14005	COG1561	YicC-like family, N-terminal region
FYK34_RS14020	COG2826	transposase and inactivated derivatives, IS30 family
FYK34_RS14060	COG0776	regulation of translation
FYK34_RS14065	COG2084	Dehydrogenase
FYK34_RS14070	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYK34_RS14095	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FYK34_RS14105	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYK34_RS14110	COG0438	transferase activity, transferring glycosyl groups
FYK34_RS14110	COG1216	Glycosyl transferase, family 2
FYK34_RS14115	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYK34_RS14135	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS14140	COG0318	PFAM AMP-dependent synthetase and ligase
FYK34_RS14155	COG4771	TonB-dependent receptor
FYK34_RS14160	COG3720	iron ion transport
FYK34_RS14170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYK34_RS14175	COG1120	ATPase activity
FYK34_RS14180	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS14185	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FYK34_RS14190	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYK34_RS14200	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYK34_RS14210	COG1846	Transcriptional regulator
FYK34_RS14220	COG2223	nitrite transmembrane transporter activity
FYK34_RS14230	COG1678	Uncharacterized ACR, COG1678
FYK34_RS14235	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FYK34_RS14255	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FYK34_RS14285	COG1960	acyl-CoA dehydrogenase activity
FYK34_RS14295	COG0517	IMP dehydrogenase activity
FYK34_RS14295	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FYK34_RS14300	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYK34_RS14305	COG1309	transcriptional regulator
FYK34_RS14315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYK34_RS14320	COG1538	Outer membrane efflux protein
FYK34_RS14325	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYK34_RS14335	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYK34_RS14370	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FYK34_RS14400	COG1126	abc transporter atp-binding protein
FYK34_RS14405	COG0765	amino acid transport
FYK34_RS14410	COG0765	amino acid transport
FYK34_RS14415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS14425	COG0456	acetyltransferase
FYK34_RS14435	COG1917	Cupin 2, conserved barrel domain protein
FYK34_RS14440	COG5285	phytanoyl-CoA dioxygenase
FYK34_RS14460	COG1522	sequence-specific DNA binding
FYK34_RS14515	COG0281	malic enzyme
FYK34_RS14515	COG0280	phosphate acetyltransferase
FYK34_RS14530	COG2990	Protein conserved in bacteria
FYK34_RS14535	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYK34_RS14550	COG3511	phospholipase C
FYK34_RS14555	COG0456	acetyltransferase
FYK34_RS14565	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYK34_RS14570	COG0625	glutathione transferase activity
FYK34_RS14610	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FYK34_RS14630	COG1858	cytochrome C peroxidase
FYK34_RS14645	COG0642	Histidine kinase
FYK34_RS14650	COG0745	RESPONSE REGULATOR receiver
FYK34_RS14660	COG0438	transferase activity, transferring glycosyl groups
FYK34_RS14675	COG2226	methyltransferase
FYK34_RS14680	COG0708	Exodeoxyribonuclease III
FYK34_RS14690	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYK34_RS14700	COG0840	transmembrane signaling receptor activity
FYK34_RS14705	COG0531	amino acid
FYK34_RS14715	COG1196	nuclear chromosome segregation
FYK34_RS14745	COG4598	ABC transporter
FYK34_RS14750	COG4160	amino acid transport
FYK34_RS14765	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FYK34_RS14770	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FYK34_RS14775	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FYK34_RS14780	COG0142	geranyltranstransferase activity
FYK34_RS14790	COG0582	viral genome integration into host DNA
FYK34_RS14815	COG2826	transposase and inactivated derivatives, IS30 family
FYK34_RS14820	COG0582	viral genome integration into host DNA
FYK34_RS14875	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FYK34_RS14880	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYK34_RS14890	COG1132	(ABC) transporter
FYK34_RS14895	COG0438	transferase activity, transferring glycosyl groups
FYK34_RS14915	COG1216	Glycosyl transferase, family 2
FYK34_RS14920	COG0463	Glycosyl transferase, family 2
FYK34_RS14925	COG0859	PFAM glycosyl transferase family 9
FYK34_RS14930	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYK34_RS14945	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FYK34_RS14945	COG1648	precorrin-2 dehydrogenase activity
FYK34_RS14960	COG1295	ribonuclease BN
FYK34_RS14960	COG1959	2 iron, 2 sulfur cluster binding
FYK34_RS14975	COG2223	nitrite transmembrane transporter activity
FYK34_RS15010	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FYK34_RS15015	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYK34_RS15020	COG1242	4 iron, 4 sulfur cluster binding
FYK34_RS15030	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYK34_RS15035	COG2813	Specifically methylates the guanine in position
FYK34_RS15035	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYK34_RS15045	COG2814	Major facilitator Superfamily
FYK34_RS15085	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FYK34_RS15110	COG2814	Major facilitator Superfamily
FYK34_RS15115	COG1393	Belongs to the ArsC family
FYK34_RS15120	COG1846	Transcriptional regulator
FYK34_RS15135	COG2814	Major facilitator Superfamily
FYK34_RS15140	COG0583	DNA-binding transcription factor activity
FYK34_RS15145	COG2855	membrane
FYK34_RS15155	COG1966	Carbon starvation protein
FYK34_RS15160	COG0745	RESPONSE REGULATOR receiver
FYK34_RS15165	COG2205	protein histidine kinase activity
FYK34_RS15175	COG0408	coproporphyrinogen oxidase activity
FYK34_RS15185	COG2076	Multidrug Resistance protein
FYK34_RS15195	COG0463	Glycosyl transferase, family 2
FYK34_RS15205	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYK34_RS15205	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYK34_RS15210	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FYK34_RS15215	COG0726	polysaccharide deacetylase
FYK34_RS15220	COG3152	Membrane
FYK34_RS15240	COG0625	glutathione transferase activity
FYK34_RS15245	COG0583	DNA-binding transcription factor activity
FYK34_RS15260	COG0840	transmembrane signaling receptor activity
FYK34_RS15285	COG2814	Major facilitator Superfamily
FYK34_RS15305	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS15345	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYK34_RS15350	COG1349	DNA-binding transcription factor activity
FYK34_RS15360	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FYK34_RS15365	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FYK34_RS15370	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FYK34_RS15375	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FYK34_RS15380	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FYK34_RS15385	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYK34_RS15390	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FYK34_RS15400	COG0356	it plays a direct role in the translocation of protons across the membrane
FYK34_RS15415	COG1192	Involved in chromosome partitioning
FYK34_RS15420	COG0357	Ribosomal RNA small subunit methyltransferase G
FYK34_RS15425	COG0445	tRNA wobble uridine modification
FYK34_RS15435	COG1720	tRNA m6t6A37 methyltransferase activity
FYK34_RS15445	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYK34_RS15450	COG2823	Periplasmic or secreted lipoprotein
FYK34_RS15455	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYK34_RS15460	COG0792	nuclease activity
FYK34_RS15465	COG3107	peptidoglycan biosynthetic process
FYK34_RS15500	COG2826	transposase and inactivated derivatives, IS30 family
FYK34_RS15515	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYK34_RS15525	COG2239	Acts as a magnesium transporter
FYK34_RS15550	COG3781	membrane
FYK34_RS15555	COG1132	(ABC) transporter
FYK34_RS15560	COG1132	(ABC) transporter
FYK34_RS15565	COG0494	nUDIX hydrolase
FYK34_RS15580	COG0084	hydrolase, TatD family'
FYK34_RS15600	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYK34_RS15605	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYK34_RS15615	COG0140	phosphoribosyl-ATP diphosphatase activity
FYK34_RS15620	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FYK34_RS15625	COG0107	imidazoleglycerol-phosphate synthase activity
FYK34_RS15630	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FYK34_RS15635	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FYK34_RS15640	COG0131	Imidazoleglycerol-phosphate dehydratase
FYK34_RS15645	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYK34_RS15650	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYK34_RS15655	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FYK34_RS15660	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYK34_RS15665	COG1999	signal sequence binding
FYK34_RS15670	COG0109	protoheme IX farnesyltransferase activity
FYK34_RS15675	COG1612	heme a metabolic process
FYK34_RS15705	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FYK34_RS15710	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYK34_RS15720	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYK34_RS15730	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYK34_RS15735	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYK34_RS15740	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYK34_RS15760	COG0688	phosphatidylethanolamine metabolic process
FYK34_RS15770	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYK34_RS15775	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FYK34_RS15780	COG0440	acetolactate synthase activity
FYK34_RS15785	COG0028	Belongs to the TPP enzyme family
FYK34_RS15810	COG0583	DNA-binding transcription factor activity
FYK34_RS15820	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYK34_RS15825	COG0402	S-adenosylhomocysteine deaminase activity
FYK34_RS15840	COG0442	prolyl-tRNA aminoacylation
FYK34_RS15845	COG3158	transport of potassium into the cell
FYK34_RS15855	COG3945	hemerythrin HHE cation binding domain
FYK34_RS15860	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYK34_RS15870	COG0745	RESPONSE REGULATOR receiver
FYK34_RS15875	COG1522	sequence-specific DNA binding
FYK34_RS15880	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYK34_RS15885	COG2190	(PTS) system
FYK34_RS15885	COG1263	PTS System
FYK34_RS15885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYK34_RS15890	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYK34_RS15895	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYK34_RS15900	COG2188	Transcriptional regulator
FYK34_RS15905	COG0697	spore germination
FYK34_RS15910	COG0811	peptide transport
FYK34_RS15915	COG0009	L-threonylcarbamoyladenylate synthase
FYK34_RS15925	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYK34_RS15930	COG0151	Belongs to the GarS family
FYK34_RS15935	COG0138	bifunctional purine biosynthesis protein purh
FYK34_RS15995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYK34_RS15995	COG4221	oxidoreductase activity
FYK34_RS15995	COG3321	synthase
FYK34_RS15995	COG0604	alcohol dehydrogenase
FYK34_RS16000	COG0583	DNA-binding transcription factor activity
FYK34_RS16015	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYK34_RS16020	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYK34_RS16045	COG1584	GPR1 FUN34 yaaH family protein
FYK34_RS16050	COG0288	reversible hydration of carbon dioxide
FYK34_RS16055	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FYK34_RS16060	COG0799	negative regulation of ribosome biogenesis
FYK34_RS16065	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FYK34_RS16080	COG2826	transposase and inactivated derivatives, IS30 family
FYK34_RS16085	COG0583	DNA-binding transcription factor activity
FYK34_RS16090	COG2814	Major facilitator Superfamily
FYK34_RS16095	COG1466	dna polymerase III delta subunit
FYK34_RS16105	COG0495	leucyl-tRNA aminoacylation
FYK34_RS16110	COG0730	response to heat
FYK34_RS16130	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FYK34_RS16150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYK34_RS16160	COG4206	TonB-dependent receptor
FYK34_RS16165	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FYK34_RS16175	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FYK34_RS16185	COG0010	Belongs to the arginase family
FYK34_RS16200	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FYK34_RS16205	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FYK34_RS16205	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FYK34_RS16210	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FYK34_RS16240	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FYK34_RS16245	COG0514	ATP-dependent DNA helicase (RecQ)
FYK34_RS16255	COG1192	Involved in chromosome partitioning
FYK34_RS16260	COG2205	protein histidine kinase activity
FYK34_RS16315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FYK34_RS16325	COG2124	cytochrome p450
FYK34_RS16335	COG0640	Transcriptional regulator
FYK34_RS16350	COG2056	Na+-H+ antiporter family
FYK34_RS16355	COG2900	Belongs to the SlyX family
FYK34_RS16370	COG0436	Aminotransferase
FYK34_RS16375	COG2171	N-acyltransferase activity
FYK34_RS16380	COG1127	ABC transporter
FYK34_RS16385	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYK34_RS16390	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYK34_RS16410	COG2824	Alkylphosphonate utilization operon protein PhnA
FYK34_RS16415	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYK34_RS16425	COG0842	Transport permease protein
FYK34_RS16430	COG1131	(ABC) transporter
FYK34_RS16450	COG1538	Outer membrane efflux protein
FYK34_RS16465	COG5433	transposase activity
FYK34_RS16665	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FYK34_RS16670	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FYK34_RS16695	COG0840	transmembrane signaling receptor activity
FYK34_RS16705	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS16710	COG3284	Transcriptional regulator
FYK34_RS16740	COG0513	Belongs to the DEAD box helicase family
FYK34_RS16750	COG4681	YaeQ
FYK34_RS16755	COG1451	nucleotide metabolic process
FYK34_RS16765	COG1879	ABC-type sugar transport system periplasmic component
FYK34_RS16795	COG0038	chloride channel
FYK34_RS16800	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FYK34_RS16805	COG0540	Belongs to the ATCase OTCase family
FYK34_RS16815	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYK34_RS16830	COG3240	lipase activity
FYK34_RS16835	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FYK34_RS16840	COG3240	lipase activity
FYK34_RS16845	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYK34_RS16845	COG2199	diguanylate cyclase activity
FYK34_RS16850	COG0657	acetylesterase activity
FYK34_RS16855	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYK34_RS16885	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYK34_RS16905	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FYK34_RS16925	COG1448	Aminotransferase
FYK34_RS16945	COG2986	histidine ammonia-lyase
FYK34_RS16950	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FYK34_RS16955	COG0010	Belongs to the arginase family
FYK34_RS16960	COG1228	amidohydrolase
FYK34_RS16975	COG0676	glucose-6-phosphate 1-epimerase activity
FYK34_RS17005	COG2962	Rard protein
FYK34_RS17025	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYK34_RS17035	COG0625	glutathione transferase activity
FYK34_RS17040	COG4628	conserved protein (DUF2132)
FYK34_RS17100	COG0494	nUDIX hydrolase
FYK34_RS17115	COG0456	acetyltransferase
FYK34_RS17120	COG1819	glycosyl
FYK34_RS17125	COG0826	peptidase U32
FYK34_RS17140	COG1653	transport
FYK34_RS17145	COG1175	transmembrane transport
FYK34_RS17150	COG0395	ABC-type sugar transport system, permease component
FYK34_RS17155	COG1472	Belongs to the glycosyl hydrolase 3 family
FYK34_RS17160	COG3842	ATPase activity
FYK34_RS17180	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FYK34_RS17185	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FYK34_RS17190	COG0469	pyruvate kinase activity
FYK34_RS17195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS17210	COG3214	Protein conserved in bacteria
FYK34_RS17230	COG2199	diguanylate cyclase activity
FYK34_RS17230	COG2203	Gaf domain
FYK34_RS17245	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FYK34_RS17250	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYK34_RS17255	COG1054	Belongs to the UPF0176 family
FYK34_RS17260	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FYK34_RS17265	COG1253	flavin adenine dinucleotide binding
FYK34_RS17295	COG3161	chorismate lyase activity
FYK34_RS17340	COG3150	esterase
FYK34_RS17350	COG1846	Transcriptional regulator
FYK34_RS17355	COG1764	response to oxidative stress
FYK34_RS17375	COG0210	DNA helicase
FYK34_RS17385	COG1410	methionine synthase
FYK34_RS17385	COG0646	methionine synthase
FYK34_RS17400	COG1404	Belongs to the peptidase S8 family
FYK34_RS17420	COG0006	proline dipeptidase activity
FYK34_RS17425	COG3135	benzoate transporter
FYK34_RS17435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYK34_RS17440	COG1846	Transcriptional regulator
FYK34_RS17440	COG0456	acetyltransferase
FYK34_RS17445	COG0579	oxidoreductase
FYK34_RS17455	COG2203	Gaf domain
FYK34_RS17455	COG2199	diguanylate cyclase activity
FYK34_RS17455	COG2200	EAL domain
FYK34_RS17490	COG2200	EAL domain
FYK34_RS17495	COG0165	Argininosuccinate lyase
FYK34_RS17510	COG1126	abc transporter atp-binding protein
FYK34_RS17515	COG0765	amino acid transport
FYK34_RS17520	COG0765	amino acid transport
FYK34_RS17530	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FYK34_RS17540	COG0424	maF-like protein
FYK34_RS17545	COG1530	ribonuclease E activity
FYK34_RS17555	COG0625	glutathione transferase activity
FYK34_RS17560	COG4122	O-methyltransferase activity
FYK34_RS17570	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYK34_RS17575	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYK34_RS17580	COG0126	phosphoglycerate kinase activity
FYK34_RS17585	COG1280	lysine exporter protein (LysE YggA)
FYK34_RS17600	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FYK34_RS17605	COG0314	molybdopterin synthase activity
FYK34_RS17620	COG0745	RESPONSE REGULATOR receiver
FYK34_RS17650	COG0762	integral membrane protein
FYK34_RS17665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYK34_RS17685	COG1902	pentaerythritol trinitrate reductase activity
FYK34_RS17685	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYK34_RS17700	COG2267	carboxylic ester hydrolase activity
FYK34_RS17705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYK34_RS17710	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FYK34_RS17720	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYK34_RS17735	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYK34_RS17745	COG1965	Belongs to the frataxin family
FYK34_RS17750	COG0004	ammonium transporteR
FYK34_RS17770	COG1045	serine acetyltransferase
FYK34_RS17790	COG0477	Major facilitator Superfamily
FYK34_RS17795	COG0583	DNA-binding transcription factor activity
FYK34_RS17805	COG2959	enzyme of heme biosynthesis
FYK34_RS17810	COG1587	Uroporphyrinogen-III synthase
FYK34_RS17820	COG0181	hydroxymethylbilane synthase activity
FYK34_RS17825	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FYK34_RS17840	COG0259	pyridoxamine-phosphate oxidase activity
FYK34_RS17845	COG0583	DNA-binding transcription factor activity
FYK34_RS17860	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FYK34_RS17865	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FYK34_RS17870	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FYK34_RS17875	COG2954	triphosphatase activity
FYK34_RS17885	COG1981	membrane
FYK34_RS17895	COG4783	chaperone-mediated protein folding
FYK34_RS17905	COG0351	phosphomethylpyrimidine kinase
FYK34_RS17910	COG0352	thiamine-phosphate diphosphorylase activity
FYK34_RS17920	COG0166	Belongs to the GPI family
FYK34_RS17925	COG0837	glucose binding
FYK34_RS17925	COG1737	Transcriptional regulator
FYK34_RS17930	COG0837	glucose binding
FYK34_RS17940	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FYK34_RS17945	COG0129	dihydroxy-acid dehydratase activity
FYK34_RS17950	COG0800	Aldolase
FYK34_RS17960	COG1404	Belongs to the peptidase S8 family
FYK34_RS17965	COG5654	RES domain protein
FYK34_RS17970	COG5642	Protein of unknown function (DUF2384)
FYK34_RS17985	COG0840	transmembrane signaling receptor activity
FYK34_RS18025	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FYK34_RS18060	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FYK34_RS18065	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FYK34_RS18070	COG0594	ribonuclease P activity
FYK34_RS18075	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FYK34_RS18080	COG0706	membrane insertase activity
FYK34_RS18085	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FYK34_RS18130	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FYK34_RS18135	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FYK34_RS18140	COG4206	TonB-dependent receptor
FYK34_RS18145	COG4771	TonB-dependent receptor
FYK34_RS18190	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYK34_RS18205	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FYK34_RS18215	COG1309	transcriptional regulator
FYK34_RS18225	COG1064	alcohol dehydrogenase
FYK34_RS18260	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FYK34_RS18275	COG0745	RESPONSE REGULATOR receiver
FYK34_RS18275	COG2972	Histidine kinase
FYK34_RS18305	COG0823	Involved in the tonB-independent uptake of proteins
FYK34_RS18320	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYK34_RS18330	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FYK34_RS18340	COG2827	Endonuclease containing a URI domain
FYK34_RS18345	COG1253	flavin adenine dinucleotide binding
FYK34_RS18350	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYK34_RS18355	COG1333	cytochrome c biogenesis protein
FYK34_RS18365	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FYK34_RS18370	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FYK34_RS18375	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FYK34_RS18385	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FYK34_RS18390	COG0156	8-amino-7-oxononanoate synthase activity
FYK34_RS18395	COG3300	MHYT domain
FYK34_RS18395	COG5001	Diguanylate cyclase
FYK34_RS18400	COG2226	methyltransferase
FYK34_RS18405	COG2267	carboxylic ester hydrolase activity
FYK34_RS18410	COG2226	methyltransferase
FYK34_RS18420	COG1752	Esterase of the alpha-beta hydrolase superfamily
FYK34_RS18425	COG0625	glutathione transferase activity
FYK34_RS18450	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FYK34_RS18465	COG2847	Copper chaperone PCu(A)C
FYK34_RS18475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FYK34_RS18485	COG0772	Belongs to the SEDS family
FYK34_RS18490	COG0768	penicillin binding
FYK34_RS18495	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FYK34_RS18500	COG1792	Involved in formation and maintenance of cell shape
FYK34_RS18505	COG1077	Cell shape determining protein MreB Mrl
FYK34_RS18510	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYK34_RS18515	COG0154	amidase activity
FYK34_RS18520	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYK34_RS18525	COG2001	Belongs to the MraZ family
FYK34_RS18530	COG0275	rRNA processing
FYK34_RS18535	COG3116	cell division
FYK34_RS18545	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYK34_RS18550	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FYK34_RS18555	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYK34_RS18560	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FYK34_RS18565	COG0772	Belongs to the SEDS family
FYK34_RS18570	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FYK34_RS18575	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYK34_RS18580	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYK34_RS18585	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYK34_RS18600	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FYK34_RS18605	COG0315	cyclic pyranopterin monophosphate synthase activity
FYK34_RS18625	COG0425	Belongs to the sulfur carrier protein TusA family
FYK34_RS18630	COG0418	dihydroorotase activity
FYK34_RS18635	COG4166	transmembrane transport
FYK34_RS18640	COG0601	transmembrane transport
FYK34_RS18645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYK34_RS18655	COG4608	Belongs to the ABC transporter superfamily
FYK34_RS18670	COG0393	Putative heavy-metal-binding
FYK34_RS18680	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS18685	COG2134	cdp-diacylglycerol pyrophosphatase
FYK34_RS18695	COG0346	lactoylglutathione lyase activity
FYK34_RS18700	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYK34_RS18725	COG1505	serine-type exopeptidase activity
FYK34_RS18740	COG3590	peptidase
FYK34_RS18750	COG3132	Protein of unknown function, DUF480
FYK34_RS18755	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYK34_RS18760	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FYK34_RS18770	COG0174	glutamine synthetase
FYK34_RS18775	COG0840	transmembrane signaling receptor activity
FYK34_RS18800	COG2814	Major facilitator Superfamily
FYK34_RS18805	COG0183	Belongs to the thiolase family
FYK34_RS18815	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FYK34_RS18820	COG2807	transmembrane transport
FYK34_RS18830	COG1846	Transcriptional regulator
FYK34_RS18850	COG1116	anion transmembrane transporter activity
FYK34_RS18860	COG3540	Alkaline phosphatase
FYK34_RS18865	COG0653	protein targeting
FYK34_RS18875	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYK34_RS18880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYK34_RS18890	COG0189	ligase activity
FYK34_RS18915	COG2922	Belongs to the Smg family
FYK34_RS18920	COG0758	DNA mediated transformation
FYK34_RS18930	COG0242	peptide deformylase activity
FYK34_RS18935	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYK34_RS18940	COG0501	Belongs to the peptidase M48B family
FYK34_RS18955	COG5000	phosphorelay sensor kinase activity
FYK34_RS18960	COG2204	response regulator
FYK34_RS18965	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYK34_RS18970	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYK34_RS18975	COG0824	Thioesterase
FYK34_RS18990	COG0783	Belongs to the Dps family
FYK34_RS18995	COG1872	DUF167
FYK34_RS19005	COG1324	tolerance protein
FYK34_RS19045	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FYK34_RS19050	COG0708	Exodeoxyribonuclease III
FYK34_RS19070	COG1253	flavin adenine dinucleotide binding
FYK34_RS19085	COG1335	isochorismatase
FYK34_RS19090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYK34_RS19100	COG0789	Transcriptional regulator
FYK34_RS19105	COG0247	lactate metabolic process
FYK34_RS19125	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYK34_RS19130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYK34_RS19135	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYK34_RS19145	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYK34_RS19150	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FYK34_RS19155	COG0632	four-way junction helicase activity
FYK34_RS19160	COG0307	riboflavin synthase, alpha
FYK34_RS19165	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FYK34_RS19170	COG2255	four-way junction helicase activity
FYK34_RS19180	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYK34_RS19185	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FYK34_RS19195	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYK34_RS19200	COG4969	Belongs to the N-Me-Phe pilin family
FYK34_RS19225	COG2884	Cell division ATP-binding protein ftsE
FYK34_RS19235	COG0742	ribosomal rna small subunit methyltransferase
FYK34_RS19240	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYK34_RS19260	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYK34_RS19270	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYK34_RS19280	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FYK34_RS19285	COG0081	regulation of translation
FYK34_RS19295	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FYK34_RS19300	COG0222	ribosome binding
FYK34_RS19305	COG0085	RNA polymerase activity
FYK34_RS19310	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FYK34_RS19315	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FYK34_RS19320	COG0049	tRNA binding
FYK34_RS19325	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FYK34_RS19330	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYK34_RS19335	COG0051	transcription antitermination factor activity, RNA binding
FYK34_RS19340	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FYK34_RS19345	COG0088	Forms part of the polypeptide exit tunnel
FYK34_RS19350	COG0089	rRNA binding
FYK34_RS19355	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FYK34_RS19360	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FYK34_RS19365	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FYK34_RS19370	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FYK34_RS19375	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FYK34_RS19380	COG0255	Belongs to the universal ribosomal protein uL29 family
FYK34_RS19385	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FYK34_RS19390	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FYK34_RS19395	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FYK34_RS19400	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FYK34_RS19405	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FYK34_RS19410	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FYK34_RS19415	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FYK34_RS19420	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FYK34_RS19425	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FYK34_RS19430	COG1841	ribosomal large subunit assembly
FYK34_RS19435	COG0200	Binds to the 23S rRNA
FYK34_RS19440	COG0201	protein transport
FYK34_RS19445	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYK34_RS19450	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYK34_RS19455	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FYK34_RS19460	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FYK34_RS19465	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FYK34_RS19470	COG0202	RNA polymerase activity
FYK34_RS19475	COG0203	ribosomal protein L17
FYK34_RS19480	COG2066	Belongs to the glutaminase family
FYK34_RS19485	COG3217	Mosc domain protein beta barrel domain protein
FYK34_RS19485	COG0633	Ferredoxin
FYK34_RS19495	COG0840	transmembrane signaling receptor activity
FYK34_RS19500	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FYK34_RS19505	COG4535	Mg2 and Co2 transporter CorC
FYK34_RS19510	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FYK34_RS19515	COG1702	phosphate starvation-inducible protein PhoH
FYK34_RS19530	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYK34_RS19540	COG4651	solute:proton antiporter activity
FYK34_RS19540	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYK34_RS19560	COG0583	DNA-binding transcription factor activity
FYK34_RS19565	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FYK34_RS19585	COG1028	Short-chain dehydrogenase reductase Sdr
FYK34_RS19590	COG0037	tRNA processing
FYK34_RS19595	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FYK34_RS19655	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYK34_RS19660	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYK34_RS19680	COG0583	DNA-binding transcription factor activity
FYK34_RS19685	COG1027	Aspartate ammonia-lyase
FYK34_RS19700	COG3171	Protein conserved in bacteria
FYK34_RS19710	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FYK34_RS19715	COG3047	cAMP biosynthetic process
FYK34_RS19720	COG3842	ATPase activity
FYK34_RS19725	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYK34_RS19735	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYK34_RS19800	COG1012	belongs to the aldehyde dehydrogenase family
FYK34_RS19810	COG2197	response regulator
FYK34_RS19815	COG0583	DNA-binding transcription factor activity
FYK34_RS19825	COG3154	lipid carrier protein
FYK34_RS19830	COG0826	peptidase U32
FYK34_RS19835	COG0826	peptidase U32
FYK34_RS19865	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FYK34_RS19870	COG1074	ATP-dependent DNA helicase activity
FYK34_RS19885	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FYK34_RS19900	COG1132	(ABC) transporter
FYK34_RS19910	COG3245	cytochrome
FYK34_RS19915	COG0210	DNA helicase
FYK34_RS19920	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYK34_RS19930	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYK34_RS19940	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FYK34_RS19945	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FYK34_RS19955	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYK34_RS19960	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FYK34_RS19965	COG0193	aminoacyl-tRNA hydrolase activity
FYK34_RS19970	COG0012	GTP binding
FYK34_RS19980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYK34_RS19985	COG0765	amino acid transport
FYK34_RS19990	COG1022	Amp-dependent synthetase and ligase
FYK34_RS20005	COG1446	asparaginase
FYK34_RS20010	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYK34_RS20025	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYK34_RS20030	COG1280	lysine exporter protein (LysE YggA)
FYK34_RS20045	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYK34_RS20050	COG0069	glutamate synthase activity
FYK34_RS20050	COG0067	glutamate synthase
FYK34_RS20050	COG0070	glutamate synthase
FYK34_RS20055	COG0493	'glutamate synthase
FYK34_RS20070	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYK34_RS20080	COG0543	2 iron, 2 sulfur cluster binding
FYK34_RS20080	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYK34_RS20085	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYK34_RS20105	COG3959	Transketolase, thiamine diphosphate binding domain
FYK34_RS20110	COG3958	Transketolase
FYK34_RS20155	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYK34_RS20165	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYK34_RS20170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYK34_RS20180	COG0459	protein refolding
FYK34_RS20205	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYK34_RS20210	COG0723	plastoquinol--plastocyanin reductase activity
FYK34_RS20215	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYK34_RS20220	COG2857	Cytochrome c1
FYK34_RS20230	COG0625	glutathione transferase activity
FYK34_RS20235	COG2969	positive regulation of protein catabolic process
FYK34_RS20240	COG0004	ammonium transporteR
FYK34_RS20245	COG0347	Belongs to the P(II) protein family
FYK34_RS20275	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYK34_RS20310	COG0109	protoheme IX farnesyltransferase activity
FYK34_RS20505	COG0840	transmembrane signaling receptor activity
FYK34_RS20580	COG4251	negative regulation of phosphorylation
FYK34_RS20580	COG3706	GGDEF domain
FYK34_RS20580	COG2203	Gaf domain
FYK34_RS20580	COG5001	Diguanylate cyclase
FYK34_RS20640	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FYK34_RS20650	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate