locus-tag	class	description
CFN79_RS00010	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CFN79_RS00020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CFN79_RS00035	COG0714	Associated with various cellular activities
CFN79_RS00040	COG0123	including yeast histone deacetylase and acetoin utilization protein
CFN79_RS00045	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CFN79_RS00065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS00070	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CFN79_RS00075	COG0316	Belongs to the HesB IscA family
CFN79_RS00080	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CFN79_RS00085	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CFN79_RS00090	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CFN79_RS00095	COG0813	purine-nucleoside phosphorylase activity
CFN79_RS00100	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CFN79_RS00105	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CFN79_RS00110	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CFN79_RS00115	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CFN79_RS00130	COG2095	MarC family integral membrane protein
CFN79_RS00135	COG1301	dicarboxylic acid transport
CFN79_RS00150	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CFN79_RS00155	COG0023	Translation Initiation Factor
CFN79_RS00180	COG3045	CreA protein
CFN79_RS00185	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CFN79_RS00185	COG0321	lipoyl(octanoyl) transferase activity
CFN79_RS00195	COG0084	hydrolase, TatD family'
CFN79_RS00210	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CFN79_RS00215	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CFN79_RS00245	COG2186	Transcriptional regulator
CFN79_RS00250	COG2807	transmembrane transport
CFN79_RS00260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CFN79_RS00265	COG4181	ATPase activity
CFN79_RS00280	COG0450	alkyl hydroperoxide reductase
CFN79_RS00285	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CFN79_RS00300	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CFN79_RS00310	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CFN79_RS00315	COG0505	Belongs to the CarA family
CFN79_RS00320	COG0268	Binds directly to 16S ribosomal RNA
CFN79_RS00330	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CFN79_RS00330	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CFN79_RS00335	COG0564	pseudouridine synthase activity
CFN79_RS00340	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CFN79_RS00345	COG2258	MOSC domain
CFN79_RS00350	COG3104	oligopeptide transport
CFN79_RS00355	COG0583	DNA-binding transcription factor activity
CFN79_RS00360	COG0019	diaminopimelate decarboxylase activity
CFN79_RS00370	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CFN79_RS00400	COG1610	YqeY-like protein
CFN79_RS00405	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CFN79_RS00410	COG2022	thiamine diphosphate biosynthetic process
CFN79_RS00420	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CFN79_RS00425	COG1758	RNA polymerase activity
CFN79_RS00430	COG0194	GDP metabolic process
CFN79_RS00435	COG2252	PERMEase
CFN79_RS00440	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CFN79_RS00460	COG1695	Transcriptional regulator
CFN79_RS00475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CFN79_RS00480	COG2235	arginine
CFN79_RS00495	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CFN79_RS00495	COG0543	2 iron, 2 sulfur cluster binding
CFN79_RS00505	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CFN79_RS00510	COG0386	Belongs to the glutathione peroxidase family
CFN79_RS00520	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CFN79_RS00535	COG0586	Pfam SNARE associated Golgi protein
CFN79_RS00540	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CFN79_RS00555	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CFN79_RS00570	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CFN79_RS00575	COG1534	Rna-binding protein
CFN79_RS00600	COG0505	Belongs to the CarA family
CFN79_RS00670	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS00685	COG2030	dehydratase
CFN79_RS00695	COG0802	atpase or kinase
CFN79_RS00700	COG0860	N-Acetylmuramoyl-L-alanine amidase
CFN79_RS00705	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CFN79_RS00710	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CFN79_RS00715	COG0237	dephospho-CoA kinase activity
CFN79_RS00720	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CFN79_RS00740	COG1555	photosystem II stabilization
CFN79_RS00740	COG1596	polysaccharide export
CFN79_RS00745	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CFN79_RS00750	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CFN79_RS00780	COG1538	Outer membrane efflux protein
CFN79_RS00785	COG0243	molybdopterin cofactor binding
CFN79_RS00785	COG3383	formate dehydrogenase (NAD+) activity
CFN79_RS00790	COG0437	4 iron, 4 sulfur cluster binding
CFN79_RS00795	COG2864	formate dehydrogenase
CFN79_RS00805	COG0745	RESPONSE REGULATOR receiver
CFN79_RS00820	COG3591	Belongs to the peptidase S1B family
CFN79_RS00825	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CFN79_RS00830	COG0631	protein serine/threonine phosphatase activity
CFN79_RS00835	COG1357	PFAM Pentapeptide repeats (8 copies)
CFN79_RS00835	COG0515	serine threonine protein kinase
CFN79_RS00840	COG1561	YicC-like family, N-terminal region
CFN79_RS00910	COG0776	regulation of translation
CFN79_RS00915	COG2084	Dehydrogenase
CFN79_RS00920	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CFN79_RS00970	COG0438	transferase activity, transferring glycosyl groups
CFN79_RS00970	COG1216	Glycosyl transferase, family 2
CFN79_RS00985	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS00995	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CFN79_RS01010	COG0028	Belongs to the TPP enzyme family
CFN79_RS01015	COG2089	acid synthase
CFN79_RS01050	COG3720	iron ion transport
CFN79_RS01060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS01065	COG1120	ATPase activity
CFN79_RS01070	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CFN79_RS01075	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CFN79_RS01085	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CFN79_RS01095	COG1846	Transcriptional regulator
CFN79_RS01105	COG2223	nitrite transmembrane transporter activity
CFN79_RS01115	COG1678	Uncharacterized ACR, COG1678
CFN79_RS01120	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CFN79_RS01135	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CFN79_RS01140	COG3530	Putative quorum-sensing-regulated virulence factor
CFN79_RS01155	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CFN79_RS01155	COG0644	oxidoreductase
CFN79_RS01165	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS01175	COG0517	IMP dehydrogenase activity
CFN79_RS01175	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CFN79_RS01180	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CFN79_RS01185	COG1309	transcriptional regulator
CFN79_RS01195	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS01200	COG1538	Outer membrane efflux protein
CFN79_RS01205	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CFN79_RS01240	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CFN79_RS01285	COG0789	Transcriptional regulator
CFN79_RS01295	COG1902	pentaerythritol trinitrate reductase activity
CFN79_RS01295	COG0446	pyridine nucleotide-disulphide oxidoreductase
CFN79_RS01305	COG0386	Belongs to the glutathione peroxidase family
CFN79_RS01330	COG0010	Belongs to the arginase family
CFN79_RS01340	COG0109	protoheme IX farnesyltransferase activity
CFN79_RS01360	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CFN79_RS01390	COG0347	Belongs to the P(II) protein family
CFN79_RS01395	COG0004	ammonium transporteR
CFN79_RS01400	COG2969	positive regulation of protein catabolic process
CFN79_RS01405	COG0625	glutathione transferase activity
CFN79_RS01410	COG2857	Cytochrome c1
CFN79_RS01415	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CFN79_RS01420	COG0723	plastoquinol--plastocyanin reductase activity
CFN79_RS01425	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CFN79_RS01435	COG1091	dTDP-4-dehydrorhamnose reductase activity
CFN79_RS01450	COG0459	protein refolding
CFN79_RS01460	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CFN79_RS01475	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS01480	COG5002	protein histidine kinase activity
CFN79_RS01485	COG0745	RESPONSE REGULATOR receiver
CFN79_RS01495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS01545	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CFN79_RS01550	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CFN79_RS01560	COG1132	(ABC) transporter
CFN79_RS01575	COG0859	PFAM glycosyl transferase family 9
CFN79_RS01580	COG0438	transferase activity, transferring glycosyl groups
CFN79_RS01595	COG1216	Glycosyl transferase, family 2
CFN79_RS01595	COG1442	glycosyl transferase family 8
CFN79_RS01605	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CFN79_RS01620	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CFN79_RS01620	COG1648	precorrin-2 dehydrogenase activity
CFN79_RS01625	COG3706	GGDEF domain
CFN79_RS01635	COG1295	ribonuclease BN
CFN79_RS01635	COG1959	2 iron, 2 sulfur cluster binding
CFN79_RS01655	COG2957	Belongs to the agmatine deiminase family
CFN79_RS01665	COG0154	amidase activity
CFN79_RS01695	COG0281	malic enzyme
CFN79_RS01695	COG0280	phosphate acetyltransferase
CFN79_RS01710	COG2990	Protein conserved in bacteria
CFN79_RS01715	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CFN79_RS01730	COG3511	phospholipase C
CFN79_RS01745	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CFN79_RS01750	COG0625	glutathione transferase activity
CFN79_RS01760	COG0277	FAD linked oxidase domain protein
CFN79_RS01775	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS01780	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CFN79_RS01805	COG0642	Histidine kinase
CFN79_RS01810	COG0745	RESPONSE REGULATOR receiver
CFN79_RS01820	COG0438	transferase activity, transferring glycosyl groups
CFN79_RS01835	COG2226	methyltransferase
CFN79_RS01840	COG0708	Exodeoxyribonuclease III
CFN79_RS01850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CFN79_RS01860	COG0840	transmembrane signaling receptor activity
CFN79_RS01865	COG0531	amino acid
CFN79_RS01875	COG1770	oligopeptidase
CFN79_RS01885	COG0848	biopolymer transport protein
CFN79_RS01890	COG0811	peptide transport
CFN79_RS01935	COG1196	nuclear chromosome segregation
CFN79_RS01965	COG4598	ABC transporter
CFN79_RS01970	COG4160	amino acid transport
CFN79_RS01975	COG4215	(ABC) transporter
CFN79_RS01985	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CFN79_RS01990	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CFN79_RS01995	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CFN79_RS02000	COG0142	geranyltranstransferase activity
CFN79_RS02035	COG2223	nitrite transmembrane transporter activity
CFN79_RS02075	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CFN79_RS02080	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CFN79_RS02085	COG1242	4 iron, 4 sulfur cluster binding
CFN79_RS02095	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CFN79_RS02100	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CFN79_RS02100	COG2813	Specifically methylates the guanine in position
CFN79_RS02110	COG2814	Major facilitator Superfamily
CFN79_RS02155	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CFN79_RS02185	COG1393	Belongs to the ArsC family
CFN79_RS02190	COG1846	Transcriptional regulator
CFN79_RS02195	COG1538	Outer membrane efflux protein
CFN79_RS02200	COG1566	PFAM secretion protein HlyD family protein
CFN79_RS02205	COG2814	Major facilitator Superfamily
CFN79_RS02210	COG0583	DNA-binding transcription factor activity
CFN79_RS02215	COG2855	membrane
CFN79_RS02225	COG1966	Carbon starvation protein
CFN79_RS02230	COG0745	RESPONSE REGULATOR receiver
CFN79_RS02235	COG2205	protein histidine kinase activity
CFN79_RS02250	COG0408	coproporphyrinogen oxidase activity
CFN79_RS02260	COG2076	Multidrug Resistance protein
CFN79_RS02265	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CFN79_RS02270	COG0463	Glycosyl transferase, family 2
CFN79_RS02280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS02280	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CFN79_RS02285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CFN79_RS02290	COG0726	polysaccharide deacetylase
CFN79_RS02320	COG0583	DNA-binding transcription factor activity
CFN79_RS02325	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CFN79_RS02345	COG1595	DNA-templated transcription, initiation
CFN79_RS02400	COG0477	Major facilitator Superfamily
CFN79_RS02405	COG0583	DNA-binding transcription factor activity
CFN79_RS02410	COG0583	DNA-binding transcription factor activity
CFN79_RS02415	COG2910	NAD(P)H-binding
CFN79_RS02435	COG0840	transmembrane signaling receptor activity
CFN79_RS02445	COG1309	transcriptional regulator
CFN79_RS02460	COG2814	Major facilitator Superfamily
CFN79_RS02490	COG0656	L-ascorbic acid biosynthetic process
CFN79_RS02500	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CFN79_RS02510	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS02545	COG2239	Acts as a magnesium transporter
CFN79_RS02570	COG0784	Response regulator, receiver
CFN79_RS02575	COG5002	protein histidine kinase activity
CFN79_RS02575	COG0784	Response regulator, receiver
CFN79_RS02575	COG2205	protein histidine kinase activity
CFN79_RS02580	COG2201	protein-glutamate methylesterase activity
CFN79_RS02585	COG2198	Histidine kinase
CFN79_RS02585	COG0643	Histidine kinase
CFN79_RS02595	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CFN79_RS02620	COG1309	transcriptional regulator
CFN79_RS02640	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CFN79_RS02645	COG1349	DNA-binding transcription factor activity
CFN79_RS02650	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CFN79_RS02655	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CFN79_RS02660	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CFN79_RS02665	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CFN79_RS02670	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CFN79_RS02675	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CFN79_RS02680	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CFN79_RS02690	COG0356	it plays a direct role in the translocation of protons across the membrane
CFN79_RS02705	COG1192	Involved in chromosome partitioning
CFN79_RS02710	COG0357	Ribosomal RNA small subunit methyltransferase G
CFN79_RS02715	COG0445	tRNA wobble uridine modification
CFN79_RS02730	COG1720	tRNA m6t6A37 methyltransferase activity
CFN79_RS02740	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CFN79_RS02745	COG2823	Periplasmic or secreted lipoprotein
CFN79_RS02750	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CFN79_RS02755	COG0792	nuclease activity
CFN79_RS02760	COG3107	peptidoglycan biosynthetic process
CFN79_RS02790	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CFN79_RS02795	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS02820	COG3781	membrane
CFN79_RS02825	COG1132	(ABC) transporter
CFN79_RS02830	COG1132	(ABC) transporter
CFN79_RS02845	COG0084	hydrolase, TatD family'
CFN79_RS02865	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CFN79_RS02870	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CFN79_RS02880	COG0140	phosphoribosyl-ATP diphosphatase activity
CFN79_RS02885	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CFN79_RS02890	COG0107	imidazoleglycerol-phosphate synthase activity
CFN79_RS02895	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CFN79_RS02900	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CFN79_RS02905	COG0131	Imidazoleglycerol-phosphate dehydratase
CFN79_RS02910	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CFN79_RS02920	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CFN79_RS02925	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CFN79_RS02930	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CFN79_RS02935	COG1999	signal sequence binding
CFN79_RS02940	COG0109	protoheme IX farnesyltransferase activity
CFN79_RS02980	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CFN79_RS02985	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CFN79_RS02990	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CFN79_RS03000	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CFN79_RS03005	COG2205	protein histidine kinase activity
CFN79_RS03020	COG0688	phosphatidylethanolamine metabolic process
CFN79_RS03030	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CFN79_RS03035	COG0440	acetolactate synthase activity
CFN79_RS03040	COG0028	Belongs to the TPP enzyme family
CFN79_RS03075	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CFN79_RS03080	COG0402	S-adenosylhomocysteine deaminase activity
CFN79_RS03090	COG1914	H( )-stimulated, divalent metal cation uptake system
CFN79_RS03095	COG0741	lytic transglycosylase activity
CFN79_RS03100	COG0442	prolyl-tRNA aminoacylation
CFN79_RS03105	COG3158	transport of potassium into the cell
CFN79_RS03130	COG0512	Glutamine amidotransferase of anthranilate synthase
CFN79_RS03130	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CFN79_RS03145	COG3945	hemerythrin HHE cation binding domain
CFN79_RS03160	COG0745	RESPONSE REGULATOR receiver
CFN79_RS03165	COG1522	sequence-specific DNA binding
CFN79_RS03170	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CFN79_RS03180	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CFN79_RS03180	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CFN79_RS03185	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CFN79_RS03190	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CFN79_RS03195	COG2188	Transcriptional regulator
CFN79_RS03205	COG0697	spore germination
CFN79_RS03210	COG0811	peptide transport
CFN79_RS03215	COG0009	L-threonylcarbamoyladenylate synthase
CFN79_RS03270	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CFN79_RS03275	COG0151	Belongs to the GarS family
CFN79_RS03280	COG0138	bifunctional purine biosynthesis protein purh
CFN79_RS03345	COG0456	acetyltransferase
CFN79_RS03350	COG3447	MASE1 domain protein
CFN79_RS03350	COG5001	Diguanylate cyclase
CFN79_RS03350	COG5002	protein histidine kinase activity
CFN79_RS03370	COG1943	Transposase
CFN79_RS03375	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CFN79_RS03380	COG0508	dehydrogenase complex catalyzes the overall conversion of
CFN79_RS03405	COG1584	GPR1 FUN34 yaaH family protein
CFN79_RS03410	COG0288	reversible hydration of carbon dioxide
CFN79_RS03415	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CFN79_RS03420	COG0799	negative regulation of ribosome biogenesis
CFN79_RS03425	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CFN79_RS03430	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CFN79_RS03435	COG0438	transferase activity, transferring glycosyl groups
CFN79_RS03450	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CFN79_RS03545	COG1466	dna polymerase III delta subunit
CFN79_RS03555	COG0495	leucyl-tRNA aminoacylation
CFN79_RS03565	COG0730	response to heat
CFN79_RS03585	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CFN79_RS03605	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CFN79_RS03615	COG4206	TonB-dependent receptor
CFN79_RS03620	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CFN79_RS03630	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CFN79_RS03650	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CFN79_RS03655	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CFN79_RS03655	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CFN79_RS03660	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CFN79_RS03720	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CFN79_RS03725	COG0514	ATP-dependent DNA helicase (RecQ)
CFN79_RS03735	COG1192	Involved in chromosome partitioning
CFN79_RS03740	COG2205	protein histidine kinase activity
CFN79_RS03795	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CFN79_RS03815	COG0640	Transcriptional regulator
CFN79_RS03830	COG2056	Na+-H+ antiporter family
CFN79_RS03835	COG2900	Belongs to the SlyX family
CFN79_RS03845	COG0456	acetyltransferase
CFN79_RS03855	COG0436	Aminotransferase
CFN79_RS03860	COG2171	N-acyltransferase activity
CFN79_RS03865	COG1127	ABC transporter
CFN79_RS03870	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CFN79_RS03875	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CFN79_RS03895	COG2824	Alkylphosphonate utilization operon protein PhnA
CFN79_RS03905	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CFN79_RS03915	COG0842	Transport permease protein
CFN79_RS03920	COG1131	(ABC) transporter
CFN79_RS04150	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CFN79_RS04155	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CFN79_RS04185	COG0840	transmembrane signaling receptor activity
CFN79_RS04195	COG2226	methyltransferase
CFN79_RS04200	COG1012	belongs to the aldehyde dehydrogenase family
CFN79_RS04205	COG3284	Transcriptional regulator
CFN79_RS04220	COG2202	Pas domain
CFN79_RS04220	COG3920	Histidine kinase
CFN79_RS04235	COG0513	Belongs to the DEAD box helicase family
CFN79_RS04245	COG4681	YaeQ
CFN79_RS04260	COG1451	nucleotide metabolic process
CFN79_RS04270	COG1879	ABC-type sugar transport system periplasmic component
CFN79_RS04295	COG0038	chloride channel
CFN79_RS04300	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
CFN79_RS04305	COG0540	Belongs to the ATCase OTCase family
CFN79_RS04320	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CFN79_RS04330	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CFN79_RS04335	COG3240	lipase activity
CFN79_RS04340	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CFN79_RS04340	COG0116	Belongs to the methyltransferase superfamily
CFN79_RS04345	COG3240	lipase activity
CFN79_RS04355	COG0657	acetylesterase activity
CFN79_RS04360	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CFN79_RS04390	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CFN79_RS04475	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CFN79_RS04490	COG1448	Aminotransferase
CFN79_RS04500	COG1943	Transposase
CFN79_RS04515	COG2986	histidine ammonia-lyase
CFN79_RS04520	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CFN79_RS04525	COG0010	Belongs to the arginase family
CFN79_RS04530	COG1228	amidohydrolase
CFN79_RS04545	COG0676	glucose-6-phosphate 1-epimerase activity
CFN79_RS04610	COG5001	Diguanylate cyclase
CFN79_RS04620	COG1538	Outer membrane efflux protein
CFN79_RS04630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS04635	COG2197	response regulator
CFN79_RS04640	COG2962	Rard protein
CFN79_RS04655	COG1858	cytochrome C peroxidase
CFN79_RS04660	COG0583	DNA-binding transcription factor activity
CFN79_RS04670	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CFN79_RS04680	COG0737	Belongs to the 5'-nucleotidase family
CFN79_RS04685	COG1733	regulation of RNA biosynthetic process
CFN79_RS04690	COG2249	NAD(P)H dehydrogenase (quinone) activity
CFN79_RS04695	COG0625	glutathione transferase activity
CFN79_RS04705	COG4628	conserved protein (DUF2132)
CFN79_RS04800	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS04810	COG0826	peptidase U32
CFN79_RS04830	COG1175	transmembrane transport
CFN79_RS04835	COG0395	ABC-type sugar transport system, permease component
CFN79_RS04840	COG1472	Belongs to the glycosyl hydrolase 3 family
CFN79_RS04845	COG3842	ATPase activity
CFN79_RS04855	COG0673	inositol 2-dehydrogenase activity
CFN79_RS04880	COG2271	Major facilitator Superfamily
CFN79_RS04885	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CFN79_RS04890	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CFN79_RS04895	COG0469	pyruvate kinase activity
CFN79_RS04915	COG3214	Protein conserved in bacteria
CFN79_RS04940	COG3706	GGDEF domain
CFN79_RS04955	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CFN79_RS04960	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CFN79_RS04965	COG1054	Belongs to the UPF0176 family
CFN79_RS04970	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CFN79_RS04975	COG1253	flavin adenine dinucleotide binding
CFN79_RS04995	COG0463	Glycosyl transferase, family 2
CFN79_RS05000	COG0859	PFAM glycosyl transferase family 9
CFN79_RS05005	COG1519	Transferase
CFN79_RS05015	COG3161	chorismate lyase activity
CFN79_RS05040	COG0583	DNA-binding transcription factor activity
CFN79_RS05075	COG3150	esterase
CFN79_RS05085	COG1846	Transcriptional regulator
CFN79_RS05090	COG1764	response to oxidative stress
CFN79_RS05110	COG0210	DNA helicase
CFN79_RS05165	COG0625	glutathione transferase activity
CFN79_RS05170	COG4122	O-methyltransferase activity
CFN79_RS05180	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CFN79_RS05185	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CFN79_RS05190	COG0126	phosphoglycerate kinase activity
CFN79_RS05195	COG1280	lysine exporter protein (LysE YggA)
CFN79_RS05205	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CFN79_RS05210	COG0314	molybdopterin synthase activity
CFN79_RS05225	COG0745	RESPONSE REGULATOR receiver
CFN79_RS05255	COG0762	integral membrane protein
CFN79_RS05260	COG4654	Cytochrome c, class I
CFN79_RS05270	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CFN79_RS05285	COG0446	pyridine nucleotide-disulphide oxidoreductase
CFN79_RS05285	COG1902	pentaerythritol trinitrate reductase activity
CFN79_RS05305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS05310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS05315	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CFN79_RS05330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CFN79_RS05350	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CFN79_RS05360	COG2954	triphosphatase activity
CFN79_RS05365	COG1981	membrane
CFN79_RS05385	COG0351	phosphomethylpyrimidine kinase
CFN79_RS05390	COG0352	thiamine-phosphate diphosphorylase activity
CFN79_RS05400	COG0166	Belongs to the GPI family
CFN79_RS05405	COG0837	glucose binding
CFN79_RS05405	COG1737	Transcriptional regulator
CFN79_RS05410	COG0837	glucose binding
CFN79_RS05420	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CFN79_RS05430	COG0800	Aldolase
CFN79_RS05435	COG0583	DNA-binding transcription factor activity
CFN79_RS05445	COG2814	Major facilitator Superfamily
CFN79_RS05455	COG2199	diguanylate cyclase activity
CFN79_RS05455	COG2203	Gaf domain
CFN79_RS05455	COG2200	EAL domain
CFN79_RS05465	COG0579	oxidoreductase
CFN79_RS05475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CFN79_RS05485	COG3135	benzoate transporter
CFN79_RS05490	COG0006	proline dipeptidase activity
CFN79_RS05525	COG0776	regulation of translation
CFN79_RS05555	COG3267	Type II secretory pathway component ExeA
CFN79_RS05555	COG3409	Peptidoglycan-binding domain 1 protein
CFN79_RS05625	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CFN79_RS05645	COG4373	Mu-like prophage FluMu protein gp28
CFN79_RS05655	COG2369	cell adhesion
CFN79_RS05780	COG1530	ribonuclease E activity
CFN79_RS05785	COG0424	maF-like protein
CFN79_RS05795	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CFN79_RS05805	COG0765	amino acid transport
CFN79_RS05810	COG0765	amino acid transport
CFN79_RS05815	COG1126	abc transporter atp-binding protein
CFN79_RS05825	COG0165	Argininosuccinate lyase
CFN79_RS05830	COG2200	EAL domain
CFN79_RS05865	COG0823	Involved in the tonB-independent uptake of proteins
CFN79_RS05895	COG2972	Histidine kinase
CFN79_RS05895	COG0745	RESPONSE REGULATOR receiver
CFN79_RS05905	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CFN79_RS05945	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS05950	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CFN79_RS05970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CFN79_RS06005	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CFN79_RS06010	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CFN79_RS06015	COG4771	TonB-dependent receptor
CFN79_RS06075	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CFN79_RS06085	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CFN79_RS06105	COG0583	DNA-binding transcription factor activity
CFN79_RS06115	COG0259	pyridoxamine-phosphate oxidase activity
CFN79_RS06130	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CFN79_RS06135	COG0181	hydroxymethylbilane synthase activity
CFN79_RS06140	COG1587	Uroporphyrinogen-III synthase
CFN79_RS06145	COG2959	enzyme of heme biosynthesis
CFN79_RS06155	COG0583	DNA-binding transcription factor activity
CFN79_RS06160	COG0477	Major facilitator Superfamily
CFN79_RS06170	COG3706	GGDEF domain
CFN79_RS06170	COG5001	Diguanylate cyclase
CFN79_RS06170	COG2203	Gaf domain
CFN79_RS06170	COG4251	negative regulation of phosphorylation
CFN79_RS06180	COG1045	serine acetyltransferase
CFN79_RS06195	COG0730	response to heat
CFN79_RS06200	COG1965	Belongs to the frataxin family
CFN79_RS06215	COG5654	RES domain protein
CFN79_RS06220	COG5642	Protein of unknown function (DUF2384)
CFN79_RS06230	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CFN79_RS06240	COG0840	transmembrane signaling receptor activity
CFN79_RS06250	COG0583	DNA-binding transcription factor activity
CFN79_RS06260	COG3179	chitinase
CFN79_RS06270	COG0156	8-amino-7-oxononanoate synthase activity
CFN79_RS06275	COG2814	Major facilitator Superfamily
CFN79_RS06280	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CFN79_RS06335	COG3727	T/G mismatch-specific endonuclease activity
CFN79_RS06360	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CFN79_RS06365	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CFN79_RS06370	COG0594	ribonuclease P activity
CFN79_RS06375	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CFN79_RS06380	COG0706	membrane insertase activity
CFN79_RS06385	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CFN79_RS06400	COG0784	Response regulator, receiver
CFN79_RS06400	COG5002	protein histidine kinase activity
CFN79_RS06400	COG2198	Histidine kinase
CFN79_RS06415	COG1174	glycine betaine transport
CFN79_RS06420	COG1125	glycine betaine transport
CFN79_RS06425	COG1174	glycine betaine transport
CFN79_RS06430	COG1732	Glycine betaine
CFN79_RS06435	COG2827	Endonuclease containing a URI domain
CFN79_RS06440	COG1253	flavin adenine dinucleotide binding
CFN79_RS06445	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CFN79_RS06460	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CFN79_RS06470	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CFN79_RS06480	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CFN79_RS06485	COG0156	8-amino-7-oxononanoate synthase activity
CFN79_RS06495	COG2226	methyltransferase
CFN79_RS06500	COG2267	carboxylic ester hydrolase activity
CFN79_RS06505	COG2226	methyltransferase
CFN79_RS06515	COG1752	Esterase of the alpha-beta hydrolase superfamily
CFN79_RS06520	COG0625	glutathione transferase activity
CFN79_RS06545	COG0733	neurotransmitter:sodium symporter activity
CFN79_RS06555	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CFN79_RS06570	COG2847	Copper chaperone PCu(A)C
CFN79_RS06580	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CFN79_RS06585	COG0612	Peptidase, M16
CFN79_RS06590	COG0772	Belongs to the SEDS family
CFN79_RS06595	COG0768	penicillin binding
CFN79_RS06600	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CFN79_RS06605	COG1792	Involved in formation and maintenance of cell shape
CFN79_RS06610	COG1077	Cell shape determining protein MreB Mrl
CFN79_RS06615	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CFN79_RS06620	COG0154	amidase activity
CFN79_RS06625	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CFN79_RS06630	COG2001	Belongs to the MraZ family
CFN79_RS06635	COG0275	rRNA processing
CFN79_RS06640	COG3116	cell division
CFN79_RS06650	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CFN79_RS06655	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CFN79_RS06660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CFN79_RS06665	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CFN79_RS06670	COG0772	Belongs to the SEDS family
CFN79_RS06675	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CFN79_RS06680	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CFN79_RS06685	COG1181	Belongs to the D-alanine--D-alanine ligase family
CFN79_RS06690	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CFN79_RS06705	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CFN79_RS06715	COG0315	cyclic pyranopterin monophosphate synthase activity
CFN79_RS06720	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS06760	COG0425	Belongs to the sulfur carrier protein TusA family
CFN79_RS06765	COG0418	dihydroorotase activity
CFN79_RS06775	COG0601	transmembrane transport
CFN79_RS06780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CFN79_RS06790	COG4608	Belongs to the ABC transporter superfamily
CFN79_RS06805	COG0393	Putative heavy-metal-binding
CFN79_RS06835	COG2134	cdp-diacylglycerol pyrophosphatase
CFN79_RS06845	COG0346	lactoylglutathione lyase activity
CFN79_RS06850	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CFN79_RS06885	COG1505	serine-type exopeptidase activity
CFN79_RS06890	COG3590	peptidase
CFN79_RS06920	COG3132	Protein of unknown function, DUF480
CFN79_RS06925	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CFN79_RS06930	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CFN79_RS06935	COG0589	response to stress
CFN79_RS06940	COG0174	glutamine synthetase
CFN79_RS06945	COG0840	transmembrane signaling receptor activity
CFN79_RS06965	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CFN79_RS06995	COG1116	anion transmembrane transporter activity
CFN79_RS07005	COG3540	Alkaline phosphatase
CFN79_RS07010	COG0653	protein targeting
CFN79_RS07020	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CFN79_RS07025	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CFN79_RS07035	COG0189	ligase activity
CFN79_RS07065	COG2922	Belongs to the Smg family
CFN79_RS07070	COG0758	DNA mediated transformation
CFN79_RS07080	COG0242	peptide deformylase activity
CFN79_RS07085	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CFN79_RS07090	COG0501	Belongs to the peptidase M48B family
CFN79_RS07095	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CFN79_RS07095	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CFN79_RS07105	COG5000	phosphorelay sensor kinase activity
CFN79_RS07110	COG2204	response regulator
CFN79_RS07115	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CFN79_RS07120	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CFN79_RS07125	COG0824	Thioesterase
CFN79_RS07140	COG0783	Belongs to the Dps family
CFN79_RS07145	COG1872	DUF167
CFN79_RS07155	COG1324	tolerance protein
CFN79_RS07205	COG2832	Protein of unknown function (DUF454)
CFN79_RS07225	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CFN79_RS07230	COG0708	Exodeoxyribonuclease III
CFN79_RS07255	COG1253	flavin adenine dinucleotide binding
CFN79_RS07270	COG1335	isochorismatase
CFN79_RS07275	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CFN79_RS07285	COG0592	DNA-directed DNA polymerase activity
CFN79_RS07295	COG0247	lactate metabolic process
CFN79_RS07315	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CFN79_RS07320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CFN79_RS07325	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CFN79_RS07345	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CFN79_RS07355	COG0632	four-way junction helicase activity
CFN79_RS07370	COG2204	response regulator
CFN79_RS07380	COG2205	protein histidine kinase activity
CFN79_RS07385	COG0307	riboflavin synthase, alpha
CFN79_RS07390	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CFN79_RS07395	COG2255	four-way junction helicase activity
CFN79_RS07415	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CFN79_RS07425	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CFN79_RS07455	COG2884	Cell division ATP-binding protein ftsE
CFN79_RS07465	COG0742	ribosomal rna small subunit methyltransferase
CFN79_RS07470	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CFN79_RS07490	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CFN79_RS07500	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CFN79_RS07510	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CFN79_RS07515	COG0081	regulation of translation
CFN79_RS07525	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CFN79_RS07530	COG0222	ribosome binding
CFN79_RS07535	COG0085	RNA polymerase activity
CFN79_RS07540	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CFN79_RS07545	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CFN79_RS07550	COG0049	tRNA binding
CFN79_RS07555	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CFN79_RS07560	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CFN79_RS07565	COG0051	transcription antitermination factor activity, RNA binding
CFN79_RS07570	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CFN79_RS07575	COG0088	Forms part of the polypeptide exit tunnel
CFN79_RS07580	COG0089	rRNA binding
CFN79_RS07585	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CFN79_RS07590	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CFN79_RS07595	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CFN79_RS07600	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CFN79_RS07605	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CFN79_RS07610	COG0255	Belongs to the universal ribosomal protein uL29 family
CFN79_RS07615	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CFN79_RS07620	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CFN79_RS07625	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CFN79_RS07630	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CFN79_RS07635	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CFN79_RS07640	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CFN79_RS07645	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CFN79_RS07650	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CFN79_RS07655	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CFN79_RS07660	COG1841	ribosomal large subunit assembly
CFN79_RS07665	COG0200	Binds to the 23S rRNA
CFN79_RS07670	COG0201	protein transport
CFN79_RS07675	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CFN79_RS07680	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CFN79_RS07685	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CFN79_RS07690	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CFN79_RS07695	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CFN79_RS07700	COG0202	RNA polymerase activity
CFN79_RS07705	COG0203	ribosomal protein L17
CFN79_RS07710	COG2066	Belongs to the glutaminase family
CFN79_RS07715	COG3217	Mosc domain protein beta barrel domain protein
CFN79_RS07715	COG0633	Ferredoxin
CFN79_RS07725	COG0840	transmembrane signaling receptor activity
CFN79_RS07730	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CFN79_RS07735	COG4535	Mg2 and Co2 transporter CorC
CFN79_RS07740	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CFN79_RS07745	COG1702	phosphate starvation-inducible protein PhoH
CFN79_RS07760	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CFN79_RS07770	COG4651	solute:proton antiporter activity
CFN79_RS07770	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CFN79_RS07790	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CFN79_RS07790	COG1024	Enoyl-CoA hydratase
CFN79_RS07795	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CFN79_RS07800	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS07825	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS07830	COG0037	tRNA processing
CFN79_RS07835	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CFN79_RS07900	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CFN79_RS07905	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CFN79_RS07925	COG0583	DNA-binding transcription factor activity
CFN79_RS07930	COG1027	Aspartate ammonia-lyase
CFN79_RS07950	COG3171	Protein conserved in bacteria
CFN79_RS07970	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CFN79_RS07975	COG3047	cAMP biosynthetic process
CFN79_RS07980	COG3842	ATPase activity
CFN79_RS07995	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CFN79_RS08035	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CFN79_RS08055	COG1012	belongs to the aldehyde dehydrogenase family
CFN79_RS08065	COG2197	response regulator
CFN79_RS08070	COG0583	DNA-binding transcription factor activity
CFN79_RS08080	COG3154	lipid carrier protein
CFN79_RS08090	COG0826	peptidase U32
CFN79_RS08115	COG3094	Invasion gene expression up-regulator, SirB
CFN79_RS08120	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CFN79_RS08125	COG1074	ATP-dependent DNA helicase activity
CFN79_RS08140	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CFN79_RS08155	COG1132	(ABC) transporter
CFN79_RS08160	COG0583	DNA-binding transcription factor activity
CFN79_RS08190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CFN79_RS08220	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CFN79_RS08245	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CFN79_RS08255	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CFN79_RS08260	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CFN79_RS08270	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CFN79_RS08275	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CFN79_RS08280	COG0193	aminoacyl-tRNA hydrolase activity
CFN79_RS08285	COG0012	GTP binding
CFN79_RS08295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS08300	COG0765	amino acid transport
CFN79_RS08305	COG1022	Amp-dependent synthetase and ligase
CFN79_RS08330	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CFN79_RS08350	COG3706	GGDEF domain
CFN79_RS08360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CFN79_RS08365	COG0070	glutamate synthase
CFN79_RS08365	COG0069	glutamate synthase activity
CFN79_RS08365	COG0067	glutamate synthase
CFN79_RS08370	COG0493	'glutamate synthase
CFN79_RS08405	COG1216	Glycosyl transferase, family 2
CFN79_RS08435	COG3594	Acyltransferase
CFN79_RS08570	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CFN79_RS08575	COG0367	asparagine synthase
CFN79_RS08600	COG0142	geranyltranstransferase activity
CFN79_RS08610	COG4106	trans-aconitate 2-methyltransferase activity
CFN79_RS08620	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CFN79_RS08625	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CFN79_RS08630	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CFN79_RS08635	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS08640	COG1902	pentaerythritol trinitrate reductase activity
CFN79_RS08640	COG0446	pyridine nucleotide-disulphide oxidoreductase
CFN79_RS08645	COG1063	alcohol dehydrogenase
CFN79_RS08655	COG1136	(ABC) transporter
CFN79_RS08655	COG0577	efflux transmembrane transporter activity
CFN79_RS08690	COG0747	negative chemotaxis
CFN79_RS08715	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CFN79_RS08720	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CFN79_RS08725	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CFN79_RS08730	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CFN79_RS08760	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CFN79_RS08765	COG0306	phosphate transporter
CFN79_RS08770	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CFN79_RS08775	COG0581	inorganic phosphate transmembrane transporter activity
CFN79_RS08790	COG0149	triose-phosphate isomerase activity
CFN79_RS08795	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CFN79_RS08805	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS08810	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS08815	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS08820	COG0649	NAD binding
CFN79_RS08840	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CFN79_RS08845	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS08855	COG0713	ATP synthesis coupled electron transport
CFN79_RS08870	COG1007	ATP synthesis coupled electron transport
CFN79_RS08900	COG1560	Kdo2-lipid A biosynthetic process
CFN79_RS08910	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CFN79_RS08915	COG3706	GGDEF domain
CFN79_RS08920	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CFN79_RS08925	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CFN79_RS08935	COG1522	sequence-specific DNA binding
CFN79_RS08945	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CFN79_RS08955	COG0625	glutathione transferase activity
CFN79_RS08975	COG0561	phosphatase activity
CFN79_RS08980	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CFN79_RS08995	COG2259	Doxx family
CFN79_RS09000	COG0583	DNA-binding transcription factor activity
CFN79_RS09015	COG2264	protein methyltransferase activity
CFN79_RS09020	COG0439	Biotin carboxylase
CFN79_RS09025	COG0511	ligase activity, forming carbon-carbon bonds
CFN79_RS09030	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CFN79_RS09035	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CFN79_RS09045	COG2226	methyltransferase
CFN79_RS09055	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CFN79_RS09060	COG1252	NADH dehydrogenase
CFN79_RS09080	COG0436	Aminotransferase
CFN79_RS09105	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CFN79_RS09120	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CFN79_RS09125	COG0513	Belongs to the DEAD box helicase family
CFN79_RS09145	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CFN79_RS09150	COG2200	EAL domain
CFN79_RS09150	COG2199	diguanylate cyclase activity
CFN79_RS09150	COG2202	Pas domain
CFN79_RS09155	COG2201	protein-glutamate methylesterase activity
CFN79_RS09160	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CFN79_RS09170	COG0835	chemotaxis
CFN79_RS09190	COG0745	RESPONSE REGULATOR receiver
CFN79_RS09200	COG0527	aspartate kinase activity
CFN79_RS09220	COG4206	TonB-dependent receptor
CFN79_RS09245	COG0322	excinuclease ABC activity
CFN79_RS09255	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CFN79_RS09275	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CFN79_RS09285	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CFN79_RS09300	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CFN79_RS09305	COG0402	S-adenosylhomocysteine deaminase activity
CFN79_RS09330	COG0277	FAD linked oxidase domain protein
CFN79_RS09330	COG0277	FAD linked oxidase domain protein
CFN79_RS09340	COG3469	chitinase activity
CFN79_RS09360	COG0840	transmembrane signaling receptor activity
CFN79_RS09500	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CFN79_RS09510	COG0039	L-malate dehydrogenase activity
CFN79_RS09515	COG2188	Transcriptional regulator
CFN79_RS09520	COG2009	succinate dehydrogenase
CFN79_RS09530	COG1053	succinate dehydrogenase
CFN79_RS09535	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CFN79_RS09540	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CFN79_RS09550	COG0567	Dehydrogenase, E1 component
CFN79_RS09555	COG0508	dehydrogenase complex catalyzes the overall conversion of
CFN79_RS09565	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CFN79_RS09570	COG0045	succinate-CoA ligase (ADP-forming) activity
CFN79_RS09585	COG0477	Major facilitator Superfamily
CFN79_RS09600	COG0840	transmembrane signaling receptor activity
CFN79_RS09605	COG0840	transmembrane signaling receptor activity
CFN79_RS09625	COG0572	uridine kinase
CFN79_RS09640	COG0633	Ferredoxin
CFN79_RS09645	COG0443	Heat shock 70 kDa protein
CFN79_RS09650	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CFN79_RS09660	COG0822	iron-sulfur transferase activity
CFN79_RS09665	COG1104	cysteine desulfurase activity
CFN79_RS09680	COG0747	negative chemotaxis
CFN79_RS09690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CFN79_RS09695	COG0444	Belongs to the ABC transporter superfamily
CFN79_RS09700	COG4608	Belongs to the ABC transporter superfamily
CFN79_RS09710	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CFN79_RS09720	COG0786	glutamate:sodium symporter activity
CFN79_RS09725	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CFN79_RS09765	COG4191	Histidine kinase
CFN79_RS09770	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CFN79_RS09775	COG0494	nUDIX hydrolase
CFN79_RS09830	COG0114	fumarate hydratase activity
CFN79_RS09835	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CFN79_RS09840	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CFN79_RS09845	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CFN79_RS09860	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CFN79_RS09870	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CFN79_RS09875	COG0302	gtp cyclohydrolase
CFN79_RS09880	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CFN79_RS09885	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS09890	COG0583	DNA-binding transcription factor activity
CFN79_RS09910	COG2814	Major facilitator Superfamily
CFN79_RS09925	COG1454	alcohol dehydrogenase
CFN79_RS09925	COG1012	belongs to the aldehyde dehydrogenase family
CFN79_RS09930	COG1113	amino acid transport
CFN79_RS09940	COG0667	Aldo Keto reductase
CFN79_RS09960	COG0740	serine-type endopeptidase activity
CFN79_RS09965	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CFN79_RS09970	COG3300	MHYT domain
CFN79_RS09970	COG5001	Diguanylate cyclase
CFN79_RS09975	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CFN79_RS09980	COG0583	DNA-binding transcription factor activity
CFN79_RS09990	COG1346	cytolysis
CFN79_RS09995	COG0789	Transcriptional regulator
CFN79_RS10000	COG2217	Heavy metal translocating P-type atpase
CFN79_RS10010	COG1607	acyl-coa hydrolase
CFN79_RS10020	COG0564	pseudouridine synthase activity
CFN79_RS10035	COG0463	Glycosyl transferase, family 2
CFN79_RS10040	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CFN79_RS10045	COG3104	oligopeptide transport
CFN79_RS10050	COG3033	Beta-eliminating lyase
CFN79_RS10065	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CFN79_RS10075	COG4533	DNA binding
CFN79_RS10090	COG0348	domain, Protein
CFN79_RS10095	COG2010	Cytochrome c
CFN79_RS10110	COG3278	Belongs to the heme-copper respiratory oxidase family
CFN79_RS10120	COG0308	aminopeptidase N
CFN79_RS10125	COG0071	Belongs to the small heat shock protein (HSP20) family
CFN79_RS10135	COG2814	Major facilitator Superfamily
CFN79_RS10145	COG0251	oxidation-reduction process
CFN79_RS10155	COG4302	ethanolamine ammonia-lyase activity
CFN79_RS10165	COG0531	amino acid
CFN79_RS10170	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CFN79_RS10180	COG3437	response regulator, receiver
CFN79_RS10215	COG1301	dicarboxylic acid transport
CFN79_RS10230	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CFN79_RS10235	COG0489	protein tyrosine kinase activity
CFN79_RS10245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CFN79_RS10245	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CFN79_RS10270	COG1278	Cold shock
CFN79_RS10280	COG3022	response to hydroperoxide
CFN79_RS10285	COG1490	D-aminoacyl-tRNA deacylase activity
CFN79_RS10290	COG1289	transmembrane transporter activity
CFN79_RS10295	COG0741	lytic transglycosylase activity
CFN79_RS10295	COG1388	LysM domain
CFN79_RS10300	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CFN79_RS10305	COG2226	methyltransferase
CFN79_RS10310	COG0328	RNA-DNA hybrid ribonuclease activity
CFN79_RS10320	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CFN79_RS10325	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CFN79_RS10330	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CFN79_RS10335	COG0704	Plays a role in the regulation of phosphate uptake
CFN79_RS10340	COG0248	Ppx GppA phosphatase
CFN79_RS10345	COG0598	Magnesium transport protein CorA
CFN79_RS10350	COG1335	isochorismatase
CFN79_RS10355	COG2217	Heavy metal translocating P-type atpase
CFN79_RS10360	COG2608	mercury ion transmembrane transporter activity
CFN79_RS10380	COG0765	amino acid transport
CFN79_RS10385	COG0765	amino acid transport
CFN79_RS10390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS10395	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CFN79_RS10400	COG0129	dihydroxy-acid dehydratase activity
CFN79_RS10410	COG2076	Multidrug Resistance protein
CFN79_RS10415	COG1196	nuclear chromosome segregation
CFN79_RS10425	COG0583	DNA-binding transcription factor activity
CFN79_RS10430	COG1741	Belongs to the pirin family
CFN79_RS10435	COG1335	isochorismatase
CFN79_RS10440	COG1228	amidohydrolase
CFN79_RS10445	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CFN79_RS10450	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CFN79_RS10455	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS10460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS10465	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CFN79_RS10465	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CFN79_RS10475	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CFN79_RS10485	COG3539	Fimbrial protein
CFN79_RS10490	COG3121	Chaperone
CFN79_RS10495	COG3188	usher protein
CFN79_RS10540	COG0322	excinuclease ABC activity
CFN79_RS10545	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CFN79_RS10580	COG3023	N-Acetylmuramoyl-L-alanine amidase
CFN79_RS10615	COG3773	Cell wall hydrolase
CFN79_RS10615	COG3409	Peptidoglycan-binding domain 1 protein
CFN79_RS10630	COG0326	Molecular chaperone. Has ATPase activity
CFN79_RS10675	COG1051	belongs to the nudix hydrolase family
CFN79_RS10680	COG1968	undecaprenyl-diphosphatase activity
CFN79_RS10690	COG2925	Exonuclease
CFN79_RS10695	COG1024	Enoyl-CoA hydratase
CFN79_RS10705	COG4251	negative regulation of phosphorylation
CFN79_RS10705	COG2203	Gaf domain
CFN79_RS10705	COG3706	GGDEF domain
CFN79_RS10705	COG5001	Diguanylate cyclase
CFN79_RS10710	COG3842	ATPase activity
CFN79_RS10715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS10725	COG2732	(Barnase) inhibitor
CFN79_RS10750	COG0586	Pfam SNARE associated Golgi protein
CFN79_RS10755	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CFN79_RS10760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CFN79_RS10765	COG1862	Preprotein translocase
CFN79_RS10770	COG0343	queuine tRNA-ribosyltransferase activity
CFN79_RS10780	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CFN79_RS10785	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CFN79_RS10790	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CFN79_RS10795	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CFN79_RS10800	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CFN79_RS10805	COG0072	phenylalanine-tRNA ligase activity
CFN79_RS10805	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CFN79_RS10810	COG0776	regulation of translation
CFN79_RS10840	COG2119	membrane
CFN79_RS10845	COG1970	mechanosensitive ion channel activity
CFN79_RS10885	COG2866	Carboxypeptidase
CFN79_RS10910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS10920	COG2226	methyltransferase
CFN79_RS11000	COG1802	Transcriptional regulator
CFN79_RS11000	COG4626	Terminase
CFN79_RS11015	COG0616	signal peptide processing
CFN79_RS11145	COG0583	DNA-binding transcription factor activity
CFN79_RS11150	COG1473	amidohydrolase
CFN79_RS11200	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CFN79_RS11215	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CFN79_RS11220	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CFN79_RS11225	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CFN79_RS11235	COG2205	protein histidine kinase activity
CFN79_RS11240	COG0745	RESPONSE REGULATOR receiver
CFN79_RS11275	COG1857	crispr-associated protein
CFN79_RS11290	COG1518	maintenance of DNA repeat elements
CFN79_RS11295	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CFN79_RS11345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CFN79_RS11360	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CFN79_RS11370	COG0494	nUDIX hydrolase
CFN79_RS11375	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CFN79_RS11390	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS11410	COG0673	inositol 2-dehydrogenase activity
CFN79_RS11415	COG1760	l-serine dehydratase
CFN79_RS11420	COG0814	amino acid
CFN79_RS11425	COG2116	formate transmembrane transporter activity
CFN79_RS11435	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CFN79_RS11440	COG3142	Participates in the control of copper homeostasis
CFN79_RS11470	COG3275	phosphorelay sensor kinase activity
CFN79_RS11480	COG0488	(ABC) transporter
CFN79_RS11485	COG5342	invasion associated locus B
CFN79_RS11630	COG0174	glutamine synthetase
CFN79_RS11635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CFN79_RS11655	COG2095	MarC family integral membrane protein
CFN79_RS11660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CFN79_RS11665	COG1393	Belongs to the ArsC family
CFN79_RS11675	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS11680	COG0779	Required for maturation of 30S ribosomal subunits
CFN79_RS11685	COG0195	Participates in both transcription termination and antitermination
CFN79_RS11685	COG2251	uridine kinase activity
CFN79_RS11690	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CFN79_RS11695	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CFN79_RS11700	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CFN79_RS11705	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CFN79_RS11710	COG1185	polyribonucleotide nucleotidyltransferase activity
CFN79_RS11830	COG1196	nuclear chromosome segregation
CFN79_RS11830	COG0741	lytic transglycosylase activity
CFN79_RS11830	COG0739	heme binding
CFN79_RS11835	COG5002	protein histidine kinase activity
CFN79_RS11835	COG2205	protein histidine kinase activity
CFN79_RS11835	COG0784	Response regulator, receiver
CFN79_RS11840	COG2197	response regulator
CFN79_RS11915	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS11920	COG1535	isochorismatase
CFN79_RS11920	COG3433	isochorismatase activity
CFN79_RS11925	COG1021	2,3-dihydroxybenzoate-AMP ligase
CFN79_RS11930	COG1169	isochorismate synthase
CFN79_RS11935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS11940	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CFN79_RS11945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS11960	COG4771	TonB-dependent receptor
CFN79_RS11985	COG3842	ATPase activity
CFN79_RS12000	COG2837	iron assimilation
CFN79_RS12010	COG3659	wide pore channel activity
CFN79_RS12015	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CFN79_RS12030	COG1012	belongs to the aldehyde dehydrogenase family
CFN79_RS12035	COG3724	N-succinylarginine dihydrolase activity
CFN79_RS12040	COG0559	Belongs to the binding-protein-dependent transport system permease family
CFN79_RS12060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS12070	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CFN79_RS12080	COG2814	Major facilitator Superfamily
CFN79_RS12100	COG1785	Belongs to the alkaline phosphatase family
CFN79_RS12105	COG2770	Histidine kinase
CFN79_RS12105	COG3437	response regulator, receiver
CFN79_RS12110	COG1643	Atp-dependent helicase
CFN79_RS12120	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CFN79_RS12125	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CFN79_RS12140	COG1349	DNA-binding transcription factor activity
CFN79_RS12155	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CFN79_RS12170	COG0697	spore germination
CFN79_RS12235	COG1024	Enoyl-CoA hydratase
CFN79_RS12250	COG0778	Nitroreductase
CFN79_RS12255	COG1797	cobyrinic acid a,c-diamide synthase activity
CFN79_RS12265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS12275	COG1120	ATPase activity
CFN79_RS12305	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
CFN79_RS12310	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
CFN79_RS12335	COG3411	Ferredoxin
CFN79_RS12340	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CFN79_RS12345	COG3811	Belongs to the UPF0386 family
CFN79_RS12360	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CFN79_RS12365	COG1492	cobalamin metabolic process
CFN79_RS12385	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CFN79_RS12390	COG0784	Response regulator, receiver
CFN79_RS12390	COG5002	protein histidine kinase activity
CFN79_RS12390	COG2205	protein histidine kinase activity
CFN79_RS12395	COG0840	transmembrane signaling receptor activity
CFN79_RS12400	COG0840	transmembrane signaling receptor activity
CFN79_RS12415	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CFN79_RS12450	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CFN79_RS12455	COG0534	Mate efflux family protein
CFN79_RS12465	COG2271	Major facilitator Superfamily
CFN79_RS12470	COG3424	synthase
CFN79_RS12500	COG0745	RESPONSE REGULATOR receiver
CFN79_RS12505	COG2205	protein histidine kinase activity
CFN79_RS12510	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CFN79_RS12515	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CFN79_RS12520	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CFN79_RS12535	COG0730	response to heat
CFN79_RS12550	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CFN79_RS12560	COG2137	regulation of response to DNA damage stimulus
CFN79_RS12565	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CFN79_RS12570	COG1420	regulation of RNA biosynthetic process
CFN79_RS12575	COG2951	lytic endotransglycosylase activity
CFN79_RS12580	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CFN79_RS12585	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CFN79_RS12590	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CFN79_RS12595	COG2226	methyltransferase
CFN79_RS12600	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CFN79_RS12610	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CFN79_RS12610	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CFN79_RS12635	COG1846	Transcriptional regulator
CFN79_RS12655	COG5002	protein histidine kinase activity
CFN79_RS12655	COG2205	protein histidine kinase activity
CFN79_RS12655	COG0784	Response regulator, receiver
CFN79_RS12660	COG0243	molybdopterin cofactor binding
CFN79_RS12670	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CFN79_RS12675	COG0746	molybdenum cofactor guanylyltransferase activity
CFN79_RS12680	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS12685	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS12690	COG1538	Outer membrane efflux protein
CFN79_RS12705	COG0583	DNA-binding transcription factor activity
CFN79_RS12710	COG0617	tRNA 3'-terminal CCA addition
CFN79_RS12715	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CFN79_RS12725	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CFN79_RS12730	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CFN79_RS12735	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CFN79_RS12750	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CFN79_RS12760	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CFN79_RS12765	COG0443	Heat shock 70 kDa protein
CFN79_RS12770	COG3239	Fatty acid desaturase
CFN79_RS12775	COG0484	heat shock protein binding
CFN79_RS12800	COG1063	alcohol dehydrogenase
CFN79_RS12805	COG0840	transmembrane signaling receptor activity
CFN79_RS12810	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CFN79_RS12815	COG0752	glycyl-tRNA synthetase alpha subunit
CFN79_RS12830	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CFN79_RS12855	COG1966	Carbon starvation protein
CFN79_RS12865	COG3279	Response regulator of the LytR AlgR family
CFN79_RS12870	COG3275	phosphorelay sensor kinase activity
CFN79_RS12875	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CFN79_RS12890	COG0733	neurotransmitter:sodium symporter activity
CFN79_RS12930	COG0840	transmembrane signaling receptor activity
CFN79_RS12955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS12960	COG0446	pyridine nucleotide-disulphide oxidoreductase
CFN79_RS12980	COG0252	asparaginase activity
CFN79_RS13000	COG0613	PHP domain protein
CFN79_RS13005	COG0009	L-threonylcarbamoyladenylate synthase
CFN79_RS13015	COG1994	Peptidase M50
CFN79_RS13020	COG0180	Tryptophanyl-tRNA synthetase
CFN79_RS13050	COG1558	bacterial-type flagellum-dependent cell motility
CFN79_RS13070	COG4786	Flagellar basal body rod
CFN79_RS13075	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CFN79_RS13080	COG1706	bacterial-type flagellum-dependent cell motility
CFN79_RS13090	COG1256	bacterial-type flagellum assembly
CFN79_RS13110	COG0367	asparagine synthase
CFN79_RS13115	COG1522	sequence-specific DNA binding
CFN79_RS13155	COG0659	secondary active sulfate transmembrane transporter activity
CFN79_RS13165	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CFN79_RS13190	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CFN79_RS13200	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CFN79_RS13205	COG1032	radical SAM domain protein
CFN79_RS13225	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CFN79_RS13230	COG0737	Belongs to the 5'-nucleotidase family
CFN79_RS13240	COG0205	6-phosphofructokinase activity
CFN79_RS13245	COG0215	cysteine-tRNA ligase activity
CFN79_RS13250	COG0254	rRNA binding
CFN79_RS13260	COG0583	DNA-binding transcription factor activity
CFN79_RS13275	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CFN79_RS13295	COG4770	biotin carboxylase activity
CFN79_RS13300	COG1024	Enoyl-CoA hydratase
CFN79_RS13305	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CFN79_RS13315	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS13320	COG1671	Belongs to the UPF0178 family
CFN79_RS13325	COG2223	nitrite transmembrane transporter activity
CFN79_RS13330	COG3279	Response regulator of the LytR AlgR family
CFN79_RS13335	COG3275	phosphorelay sensor kinase activity
CFN79_RS13350	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CFN79_RS13350	COG1017	nitric oxide dioxygenase activity
CFN79_RS13355	COG0625	glutathione transferase activity
CFN79_RS13360	COG1846	Transcriptional regulator
CFN79_RS13365	COG0697	spore germination
CFN79_RS13400	COG2226	methyltransferase
CFN79_RS13410	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS13415	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CFN79_RS13420	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS13460	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS13465	COG0456	acetyltransferase
CFN79_RS13485	COG3318	Belongs to the UPF0149 family
CFN79_RS13485	COG3012	SEC-C Motif Domain Protein
CFN79_RS13505	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS13515	COG0494	nUDIX hydrolase
CFN79_RS13525	COG2766	serine protein kinase
CFN79_RS13530	COG2718	Belongs to the UPF0229 family
CFN79_RS13535	COG2719	SpoVR family
CFN79_RS13550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS13555	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CFN79_RS13560	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CFN79_RS13570	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CFN79_RS13575	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CFN79_RS13580	COG2814	Major facilitator Superfamily
CFN79_RS13590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS13605	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CFN79_RS13615	COG0439	Biotin carboxylase
CFN79_RS13640	COG0167	dihydroorotate dehydrogenase activity
CFN79_RS13655	COG0616	signal peptide processing
CFN79_RS13655	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CFN79_RS13675	COG1530	ribonuclease E activity
CFN79_RS13690	COG0671	phosphoesterase, PA-phosphatase related
CFN79_RS13695	COG0477	Major facilitator Superfamily
CFN79_RS13700	COG3681	Belongs to the UPF0597 family
CFN79_RS13705	COG2207	Transcriptional regulator
CFN79_RS13715	COG0583	DNA-binding transcription factor activity
CFN79_RS13720	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CFN79_RS13725	COG4208	sulfate ABC transporter
CFN79_RS13730	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CFN79_RS13735	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CFN79_RS13760	COG1309	transcriptional regulator
CFN79_RS13775	COG3454	Phosphonate metabolism
CFN79_RS13780	COG4778	phosphonate C-P lyase system protein PhnL
CFN79_RS13785	COG4107	phosphonate C-P lyase system protein PhnK
CFN79_RS13790	COG3627	carbon phosphorus lyase activity
CFN79_RS13795	COG3626	phosphonate metabolism
CFN79_RS13800	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CFN79_RS13805	COG3624	Phosphonate C-P lyase system protein PhnG
CFN79_RS13810	COG2188	Transcriptional regulator
CFN79_RS13815	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CFN79_RS13820	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CFN79_RS13835	COG1840	ABC-type Fe3 transport system, periplasmic component
CFN79_RS13840	COG3842	ATPase activity
CFN79_RS13870	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
CFN79_RS13880	COG0583	DNA-binding transcription factor activity
CFN79_RS13890	COG1473	amidohydrolase
CFN79_RS13900	COG3321	synthase
CFN79_RS13900	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS13900	COG0300	oxidoreductase activity
CFN79_RS13900	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS13900	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS13920	COG1522	sequence-specific DNA binding
CFN79_RS13935	COG3938	Belongs to the proline racemase family
CFN79_RS13950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS13990	COG2814	Major facilitator Superfamily
CFN79_RS14015	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CFN79_RS14025	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CFN79_RS14030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CFN79_RS14080	COG3842	ATPase activity
CFN79_RS14085	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CFN79_RS14100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS14105	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CFN79_RS14120	COG1741	Belongs to the pirin family
CFN79_RS14130	COG0583	DNA-binding transcription factor activity
CFN79_RS14135	COG1802	Transcriptional regulator
CFN79_RS14165	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CFN79_RS14170	COG0788	formyltetrahydrofolate deformylase activity
CFN79_RS14185	COG1968	undecaprenyl-diphosphatase activity
CFN79_RS14195	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CFN79_RS14200	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CFN79_RS14205	COG1376	ErfK ybiS ycfS ynhG family protein
CFN79_RS14260	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CFN79_RS14290	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CFN79_RS14365	COG2207	Transcriptional regulator
CFN79_RS14405	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CFN79_RS14455	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFN79_RS14465	COG1716	ATPase activity
CFN79_RS14465	COG5001	Diguanylate cyclase
CFN79_RS14480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CFN79_RS14490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CFN79_RS14505	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CFN79_RS14515	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CFN79_RS14515	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CFN79_RS14525	COG0542	response to heat
CFN79_RS14530	COG2818	Glycosylase
CFN79_RS14535	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
CFN79_RS14540	COG2207	Transcriptional regulator
CFN79_RS14540	COG4753	response regulator
CFN79_RS14545	COG0745	RESPONSE REGULATOR receiver
CFN79_RS14550	COG2205	protein histidine kinase activity
CFN79_RS14550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS14555	COG2833	Protein of unknown function (DUF455)
CFN79_RS14570	COG0826	peptidase U32
CFN79_RS14580	COG1176	ABC-type spermidine putrescine transport system, permease component I
CFN79_RS14585	COG1177	transmembrane transport
CFN79_RS14595	COG0018	arginyl-trna synthetase
CFN79_RS14660	COG0747	negative chemotaxis
CFN79_RS14680	COG4206	TonB-dependent receptor
CFN79_RS14705	COG3590	peptidase
CFN79_RS14725	COG1199	ATP-dependent helicase activity
CFN79_RS14735	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CFN79_RS14740	COG0137	argininosuccinate synthase activity
CFN79_RS14770	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CFN79_RS14775	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CFN79_RS14795	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CFN79_RS14805	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CFN79_RS14815	COG2135	peptidase activity
CFN79_RS14885	COG1196	nuclear chromosome segregation
CFN79_RS14955	COG1802	Transcriptional regulator
CFN79_RS14955	COG4626	Terminase
CFN79_RS15050	COG2974	May be involved in recombination
CFN79_RS15140	COG0582	viral genome integration into host DNA
CFN79_RS15165	COG2860	membrane
CFN79_RS15180	COG0583	DNA-binding transcription factor activity
CFN79_RS15185	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CFN79_RS15205	COG1012	belongs to the aldehyde dehydrogenase family
CFN79_RS15215	COG1917	Cupin 2, conserved barrel domain protein
CFN79_RS15215	COG1396	sequence-specific DNA binding
CFN79_RS15220	COG0686	Belongs to the AlaDH PNT family
CFN79_RS15225	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CFN79_RS15230	COG0174	glutamine synthetase
CFN79_RS15245	COG1360	Flagellar Motor Protein
CFN79_RS15260	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CFN79_RS15265	COG2828	Protein conserved in bacteria
CFN79_RS15270	COG0617	tRNA 3'-terminal CCA addition
CFN79_RS15280	COG0739	heme binding
CFN79_RS15280	COG0741	lytic transglycosylase activity
CFN79_RS15280	COG1196	nuclear chromosome segregation
CFN79_RS15285	COG0346	lactoylglutathione lyase activity
CFN79_RS15290	COG0678	peroxiredoxin activity
CFN79_RS15290	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CFN79_RS15295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CFN79_RS15305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CFN79_RS15315	COG2217	Heavy metal translocating P-type atpase
CFN79_RS15320	COG0604	alcohol dehydrogenase
CFN79_RS15320	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS15320	COG3321	synthase
CFN79_RS15325	COG1047	Peptidyl-prolyl cis-trans
CFN79_RS15335	COG0347	Belongs to the P(II) protein family
CFN79_RS15340	COG1280	lysine exporter protein (LysE YggA)
CFN79_RS15345	COG1666	GTP binding
CFN79_RS15350	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CFN79_RS15365	COG1063	alcohol dehydrogenase
CFN79_RS15375	COG2828	Protein conserved in bacteria
CFN79_RS15415	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CFN79_RS15425	COG0481	GTPase activity
CFN79_RS15440	COG0571	ribonuclease III activity
CFN79_RS15445	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CFN79_RS15455	COG1381	Involved in DNA repair and RecF pathway recombination
CFN79_RS15460	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CFN79_RS15470	COG0736	holo-[acyl-carrier-protein] synthase activity
CFN79_RS15475	COG1472	Belongs to the glycosyl hydrolase 3 family
CFN79_RS15495	COG0456	acetyltransferase
CFN79_RS15510	COG1162	GTPase activity
CFN79_RS15525	COG1024	Enoyl-CoA hydratase
CFN79_RS15530	COG1024	Enoyl-CoA hydratase
CFN79_RS15545	COG1250	3-hydroxyacyl-CoA dehydrogenase
CFN79_RS15555	COG0183	Belongs to the thiolase family
CFN79_RS15570	COG1309	transcriptional regulator
CFN79_RS15575	COG0859	PFAM glycosyl transferase family 9
CFN79_RS15590	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CFN79_RS15605	COG0312	modulator of DNA gyrase
CFN79_RS15610	COG0124	histidyl-tRNA synthetase
CFN79_RS15625	COG1473	amidohydrolase
CFN79_RS15635	COG0529	Catalyzes the synthesis of activated sulfate
CFN79_RS15670	COG3493	citrate carrier protein
CFN79_RS15675	COG0066	3-isopropylmalate dehydratase activity
CFN79_RS15680	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CFN79_RS15685	COG0583	DNA-binding transcription factor activity
CFN79_RS15700	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CFN79_RS15710	COG0512	Glutamine amidotransferase of anthranilate synthase
CFN79_RS15715	COG1733	regulation of RNA biosynthetic process
CFN79_RS15735	COG0546	phosphoglycolate phosphatase activity
CFN79_RS15740	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS15745	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CFN79_RS15750	COG2967	ApaG domain
CFN79_RS15755	COG5265	(ABC) transporter
CFN79_RS15765	COG0346	lactoylglutathione lyase activity
CFN79_RS15780	COG1418	mRNA catabolic process
CFN79_RS15820	COG0052	Belongs to the universal ribosomal protein uS2 family
CFN79_RS15825	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CFN79_RS15830	COG0528	UMP kinase activity
CFN79_RS15835	COG0233	cytoplasmic translational termination
CFN79_RS15840	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CFN79_RS15845	COG0575	Belongs to the CDS family
CFN79_RS15850	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CFN79_RS15865	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CFN79_RS15870	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CFN79_RS15875	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CFN79_RS15880	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CFN79_RS15885	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CFN79_RS15890	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CFN79_RS15915	COG2201	protein-glutamate methylesterase activity
CFN79_RS15925	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CFN79_RS15940	COG1858	cytochrome C peroxidase
CFN79_RS15970	COG1115	amino acid carrier protein
CFN79_RS15975	COG3707	response regulator
CFN79_RS15980	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CFN79_RS15985	COG2223	nitrite transmembrane transporter activity
CFN79_RS15990	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CFN79_RS16000	COG0243	molybdopterin cofactor binding
CFN79_RS16010	COG4774	siderophore transport
CFN79_RS16015	COG2382	esterase
CFN79_RS16025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS16025	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CFN79_RS16030	COG1120	ATPase activity
CFN79_RS16035	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS16040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CFN79_RS16055	COG4592	Periplasmic binding protein
CFN79_RS16065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS16075	COG0346	lactoylglutathione lyase activity
CFN79_RS16080	COG0778	Nitroreductase
CFN79_RS16100	COG0738	Major facilitator superfamily
CFN79_RS16115	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CFN79_RS16190	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CFN79_RS16220	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CFN79_RS16225	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CFN79_RS16230	COG3568	Endonuclease Exonuclease Phosphatase
CFN79_RS16240	COG2011	ABC-type metal ion transport system permease component
CFN79_RS16265	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CFN79_RS16280	COG1619	proteins homologs of microcin C7 resistance protein MccF
CFN79_RS16285	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CFN79_RS16290	COG0175	sulfate reduction
CFN79_RS16295	COG2895	sulfate adenylyltransferase (ATP) activity
CFN79_RS16305	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CFN79_RS16305	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CFN79_RS16305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CFN79_RS16310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CFN79_RS16315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CFN79_RS16315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CFN79_RS16315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CFN79_RS16325	COG2207	Transcriptional regulator
CFN79_RS16335	COG0497	DNA recombination
CFN79_RS16340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CFN79_RS16345	COG4566	intracellular signal transduction
CFN79_RS16355	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CFN79_RS16360	COG0123	including yeast histone deacetylase and acetoin utilization protein
CFN79_RS16380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CFN79_RS16400	COG0024	Methionine aminopeptidase
CFN79_RS16405	COG2378	regulation of single-species biofilm formation
CFN79_RS16415	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CFN79_RS16415	COG0237	dephospho-CoA kinase activity
CFN79_RS16435	COG1942	4-Oxalocrotonate Tautomerase
CFN79_RS16450	COG1435	thymidine kinase activity
CFN79_RS16455	COG1073	alpha beta
CFN79_RS16465	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CFN79_RS16470	COG0564	pseudouridine synthase activity
CFN79_RS16475	COG1744	ABC transporter substrate-binding protein PnrA-like
CFN79_RS16480	COG3845	ABC transporter
CFN79_RS16485	COG4603	Belongs to the binding-protein-dependent transport system permease family
CFN79_RS16490	COG1079	Belongs to the binding-protein-dependent transport system permease family
CFN79_RS16495	COG0303	'Molybdopterin
CFN79_RS16505	COG0628	permease
CFN79_RS16540	COG1573	uracil-dna glycosylase
CFN79_RS16545	COG2070	2-Nitropropane dioxygenase
CFN79_RS16555	COG0545	Peptidyl-prolyl cis-trans isomerase
CFN79_RS16560	COG1956	GAF domain-containing protein
CFN79_RS16565	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS16575	COG2154	pterin-4-alpha-carbinolamine dehydratase
CFN79_RS16585	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CFN79_RS16590	COG0166	Belongs to the GPI family
CFN79_RS16605	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CFN79_RS16610	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CFN79_RS16640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CFN79_RS16645	COG0733	neurotransmitter:sodium symporter activity
CFN79_RS16675	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CFN79_RS16680	COG1629	transport
CFN79_RS16685	COG0307	riboflavin synthase, alpha
CFN79_RS16700	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CFN79_RS16705	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CFN79_RS16715	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CFN79_RS16725	COG0443	Heat shock 70 kDa protein
CFN79_RS16735	COG0024	Methionine aminopeptidase
CFN79_RS16750	COG0745	RESPONSE REGULATOR receiver
CFN79_RS16765	COG1187	pseudouridine synthase activity
CFN79_RS16790	COG1217	gtp-binding protein TYPA
CFN79_RS16805	COG0602	queuosine metabolic process
CFN79_RS16815	COG2814	Major facilitator Superfamily
CFN79_RS16820	COG0625	glutathione transferase activity
CFN79_RS16830	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CFN79_RS16840	COG0038	chloride channel
CFN79_RS16845	COG0583	DNA-binding transcription factor activity
CFN79_RS16865	COG1744	ABC transporter substrate-binding protein PnrA-like
CFN79_RS16870	COG2375	cellular response to nickel ion
CFN79_RS16875	COG1695	Transcriptional regulator
CFN79_RS16880	COG0840	transmembrane signaling receptor activity
CFN79_RS16890	COG1988	membrane-bound metal-dependent
CFN79_RS16895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS16900	COG1131	(ABC) transporter
CFN79_RS16905	COG0842	Transport permease protein
CFN79_RS16910	COG0842	Transport permease protein
CFN79_RS16920	COG0534	Mate efflux family protein
CFN79_RS16960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS16965	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CFN79_RS16980	COG0798	PFAM Bile acid sodium symporter
CFN79_RS17005	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CFN79_RS17010	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CFN79_RS17015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFN79_RS17020	COG1024	Enoyl-CoA hydratase
CFN79_RS17025	COG1024	Enoyl-CoA hydratase
CFN79_RS17030	COG3425	synthase
CFN79_RS17040	COG0300	oxidoreductase activity
CFN79_RS17040	COG3321	synthase
CFN79_RS17040	COG4221	oxidoreductase activity
CFN79_RS17040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFN79_RS17045	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFN79_RS17045	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS17045	COG3321	synthase
CFN79_RS17045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS17045	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS17050	COG3321	synthase
CFN79_RS17050	COG4221	oxidoreductase activity
CFN79_RS17050	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS17050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS17050	COG4221	oxidoreductase activity
CFN79_RS17050	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS17050	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS17050	COG3321	synthase
CFN79_RS17080	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS17080	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS17080	COG3321	synthase
CFN79_RS17080	COG0318	PFAM AMP-dependent synthetase and ligase
CFN79_RS17080	COG0300	oxidoreductase activity
CFN79_RS17085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CFN79_RS17085	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS17085	COG3321	synthase
CFN79_RS17085	COG4221	oxidoreductase activity
CFN79_RS17095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS17100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS17110	COG2207	Transcriptional regulator
CFN79_RS17140	COG0739	heme binding
CFN79_RS17145	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CFN79_RS17150	COG1674	ftsk spoiiie
CFN79_RS17155	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CFN79_RS17175	COG1024	Enoyl-CoA hydratase
CFN79_RS17215	COG1764	response to oxidative stress
CFN79_RS17230	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CFN79_RS17255	COG3411	Ferredoxin
CFN79_RS17265	COG2081	HI0933 family
CFN79_RS17270	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CFN79_RS17275	COG3706	GGDEF domain
CFN79_RS17275	COG4251	negative regulation of phosphorylation
CFN79_RS17275	COG5001	Diguanylate cyclase
CFN79_RS17275	COG2203	Gaf domain
CFN79_RS17280	COG2201	protein-glutamate methylesterase activity
CFN79_RS17285	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CFN79_RS17300	COG2198	Histidine kinase
CFN79_RS17300	COG0643	Histidine kinase
CFN79_RS17315	COG3290	protein histidine kinase activity
CFN79_RS17315	COG0840	transmembrane signaling receptor activity
CFN79_RS17330	COG1286	toxin biosynthetic process
CFN79_RS17340	COG0285	dihydrofolate synthase activity
CFN79_RS17355	COG0488	(ABC) transporter
CFN79_RS17370	COG0791	NLP P60 protein
CFN79_RS17395	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CFN79_RS17410	COG0697	spore germination
CFN79_RS17415	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CFN79_RS17420	COG1763	Mo-molybdopterin cofactor biosynthetic process
CFN79_RS17425	COG3850	Histidine kinase
CFN79_RS17430	COG2197	response regulator
CFN79_RS17440	COG2181	nitrate reductase activity
CFN79_RS17445	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CFN79_RS17450	COG1140	nitrate reductase beta subunit
CFN79_RS17455	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CFN79_RS17460	COG2223	nitrite transmembrane transporter activity
CFN79_RS17475	COG3008	intermembrane lipid transfer
CFN79_RS17480	COG2995	paraquat-inducible protein a
CFN79_RS17500	COG0583	DNA-binding transcription factor activity
CFN79_RS17505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CFN79_RS17525	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CFN79_RS17530	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CFN79_RS17535	COG0740	serine-type endopeptidase activity
CFN79_RS17540	COG0544	peptidyl-prolyl cis-trans isomerase activity
CFN79_RS17555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CFN79_RS17570	COG4221	oxidoreductase activity
CFN79_RS17575	COG0583	DNA-binding transcription factor activity
CFN79_RS17585	COG5001	Diguanylate cyclase
CFN79_RS17595	COG0295	cytidine deaminase activity
CFN79_RS17605	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CFN79_RS17630	COG4999	Histidine kinase
CFN79_RS17630	COG3850	Histidine kinase
CFN79_RS17630	COG2205	protein histidine kinase activity
CFN79_RS17630	COG3437	response regulator, receiver
CFN79_RS17635	COG0745	RESPONSE REGULATOR receiver
CFN79_RS17645	COG0840	transmembrane signaling receptor activity
CFN79_RS17650	COG3048	D-serine ammonia-lyase activity
CFN79_RS17655	COG0583	DNA-binding transcription factor activity
CFN79_RS17680	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CFN79_RS17695	COG2124	cytochrome p450
CFN79_RS17760	COG0387	Pfam Sodium calcium exchanger
CFN79_RS17780	COG0525	valine-tRNA ligase activity
CFN79_RS17790	COG1228	amidohydrolase
CFN79_RS17810	COG2194	sulfuric ester hydrolase activity
CFN79_RS17820	COG0457	Tetratricopeptide repeat
CFN79_RS17825	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CFN79_RS17835	COG1215	transferase activity, transferring glycosyl groups
CFN79_RS17855	COG0583	DNA-binding transcription factor activity
CFN79_RS17875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CFN79_RS17890	COG0300	oxidoreductase activity
CFN79_RS17895	COG1722	exodeoxyribonuclease VII activity
CFN79_RS17900	COG0142	geranyltranstransferase activity
CFN79_RS17905	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CFN79_RS17920	COG2195	Cleaves the N-terminal amino acid of tripeptides
CFN79_RS17940	COG1309	transcriptional regulator
CFN79_RS17955	COG1136	(ABC) transporter
CFN79_RS17955	COG0577	efflux transmembrane transporter activity
CFN79_RS17960	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS17965	COG0583	DNA-binding transcription factor activity
CFN79_RS17970	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS18000	COG0134	indole-3-glycerol-phosphate synthase activity
CFN79_RS18005	COG5380	lipid catabolic process
CFN79_RS18010	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CFN79_RS18015	COG1752	Esterase of the alpha-beta hydrolase superfamily
CFN79_RS18035	COG0183	Belongs to the thiolase family
CFN79_RS18040	COG1250	3-hydroxyacyl-CoA dehydrogenase
CFN79_RS18040	COG1024	Enoyl-CoA hydratase
CFN79_RS18055	COG1960	acyl-CoA dehydrogenase activity
CFN79_RS18080	COG1454	alcohol dehydrogenase
CFN79_RS18085	COG2095	MarC family integral membrane protein
CFN79_RS18090	COG0833	amino acid
CFN79_RS18095	COG3158	transport of potassium into the cell
CFN79_RS18100	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CFN79_RS18105	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CFN79_RS18120	COG1388	LysM domain
CFN79_RS18120	COG3858	chitin binding
CFN79_RS18130	COG0625	glutathione transferase activity
CFN79_RS18140	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CFN79_RS18185	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CFN79_RS18190	COG1765	OsmC-like protein
CFN79_RS18195	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CFN79_RS18200	COG0488	(ABC) transporter
CFN79_RS18210	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CFN79_RS18215	COG0159	tryptophan synthase activity
CFN79_RS18220	COG0133	tryptophan synthase activity
CFN79_RS18230	COG0101	tRNA pseudouridine synthase activity
CFN79_RS18265	COG0473	3-isopropylmalate dehydrogenase activity
CFN79_RS18285	COG0066	3-isopropylmalate dehydratase activity
CFN79_RS18295	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CFN79_RS18310	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CFN79_RS18315	COG0179	Fumarylacetoacetate (FAA) hydrolase
CFN79_RS18320	COG3243	poly(R)-hydroxyalkanoic acid synthase
CFN79_RS18325	COG0183	Belongs to the thiolase family
CFN79_RS18345	COG0789	Transcriptional regulator
CFN79_RS18350	COG0655	NAD(P)H dehydrogenase (quinone) activity
CFN79_RS18360	COG0006	proline dipeptidase activity
CFN79_RS18375	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CFN79_RS18385	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS18400	COG0492	ferredoxin-NADP+ reductase activity
CFN79_RS18410	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CFN79_RS18415	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CFN79_RS18435	COG0488	(ABC) transporter
CFN79_RS18455	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CFN79_RS18475	COG0084	hydrolase, TatD family'
CFN79_RS18495	COG1902	pentaerythritol trinitrate reductase activity
CFN79_RS18505	COG2814	Major facilitator Superfamily
CFN79_RS18510	COG0583	DNA-binding transcription factor activity
CFN79_RS18545	COG2831	hemolysin activation secretion protein
CFN79_RS18550	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CFN79_RS18555	COG0513	Belongs to the DEAD box helicase family
CFN79_RS18590	COG1566	PFAM secretion protein HlyD family protein
CFN79_RS18600	COG1073	alpha beta
CFN79_RS18605	COG0727	PFAM Uncharacterised protein family (UPF0153)
CFN79_RS18615	COG0840	transmembrane signaling receptor activity
CFN79_RS18620	COG0513	Belongs to the DEAD box helicase family
CFN79_RS18625	COG2175	clavaminate synthase activity
CFN79_RS18630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CFN79_RS18635	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CFN79_RS18640	COG4521	taurine ABC transporter
CFN79_RS18650	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CFN79_RS18660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CFN79_RS18665	COG2010	Cytochrome c
CFN79_RS18670	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CFN79_RS18700	COG3210	domain, Protein
CFN79_RS18705	COG2831	hemolysin activation secretion protein
CFN79_RS18710	COG1760	l-serine dehydratase
CFN79_RS18715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS18720	COG1166	arginine decarboxylase activity
CFN79_RS18725	COG2988	succinylglutamate desuccinylase activity
CFN79_RS18730	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CFN79_RS18745	COG1706	bacterial-type flagellum-dependent cell motility
CFN79_RS18750	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CFN79_RS18765	COG1749	Flagellar hook protein flgE
CFN79_RS18770	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CFN79_RS18775	COG1558	bacterial-type flagellum-dependent cell motility
CFN79_RS18780	COG1815	bacterial-type flagellum-dependent cell motility
CFN79_RS18795	COG2771	luxR family
CFN79_RS18795	COG2200	EAL domain
CFN79_RS18800	COG0513	Belongs to the DEAD box helicase family
CFN79_RS18815	COG1940	carbohydrate kinase activity
CFN79_RS18820	COG2971	BadF BadG BcrA BcrD
CFN79_RS18835	COG0395	ABC-type sugar transport system, permease component
CFN79_RS18850	COG0477	Major facilitator Superfamily
CFN79_RS18865	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CFN79_RS18870	COG2816	NAD+ diphosphatase activity
CFN79_RS18885	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CFN79_RS18890	COG0732	type I restriction modification DNA specificity domain
CFN79_RS18895	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CFN79_RS18915	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CFN79_RS18920	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CFN79_RS18925	COG2135	peptidase activity
CFN79_RS19130	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
CFN79_RS19195	COG0840	transmembrane signaling receptor activity
CFN79_RS19200	COG2096	Adenosyltransferase
CFN79_RS19215	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CFN79_RS19230	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CFN79_RS19240	COG2030	dehydratase
CFN79_RS19245	COG0516	GMP reductase activity
CFN79_RS19255	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CFN79_RS19265	COG1739	Uncharacterized protein family UPF0029
CFN79_RS19280	COG2917	probably involved in intracellular septation
CFN79_RS19285	COG2350	Protein conserved in bacteria
CFN79_RS19295	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CFN79_RS19300	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CFN79_RS19305	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CFN79_RS19330	COG0583	DNA-binding transcription factor activity
CFN79_RS19335	COG0121	glutamine amidotransferase
CFN79_RS19395	COG1609	Transcriptional regulator
CFN79_RS19400	COG3265	gluconokinase activity
CFN79_RS19405	COG2271	Major facilitator Superfamily
CFN79_RS19420	COG4566	intracellular signal transduction
CFN79_RS19425	COG0668	transmembrane transport
CFN79_RS19430	COG1136	(ABC) transporter
CFN79_RS19445	COG0791	NLP P60 protein
CFN79_RS19450	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CFN79_RS19460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS19480	COG1595	DNA-templated transcription, initiation
CFN79_RS19495	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS19500	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CFN79_RS19510	COG1562	ergosterol biosynthetic process
CFN79_RS19530	COG1126	abc transporter atp-binding protein
CFN79_RS19535	COG0765	amino acid transport
CFN79_RS19540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS19585	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CFN79_RS19590	COG1360	Flagellar Motor Protein
CFN79_RS19595	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CFN79_RS19600	COG1191	sigma factor activity
CFN79_RS19655	COG1677	Flagellar hook-basal body complex protein FliE
CFN79_RS19675	COG1987	bacterial-type flagellum assembly
CFN79_RS19700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS19700	COG2205	protein histidine kinase activity
CFN79_RS19710	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CFN79_RS19730	COG1879	ABC-type sugar transport system periplasmic component
CFN79_RS19735	COG1172	Belongs to the binding-protein-dependent transport system permease family
CFN79_RS19740	COG1129	ABC transporter
CFN79_RS19745	COG1869	D-ribose catabolic process
CFN79_RS19750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CFN79_RS19760	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CFN79_RS19770	COG0625	glutathione transferase activity
CFN79_RS19780	COG1620	l-lactate permease
CFN79_RS19785	COG0277	FAD linked oxidase domain protein
CFN79_RS19790	COG1139	Iron-sulfur cluster binding protein
CFN79_RS19800	COG0247	lactate metabolic process
CFN79_RS19805	COG0784	Response regulator, receiver
CFN79_RS19805	COG0835	chemotaxis
CFN79_RS19815	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CFN79_RS19825	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CFN79_RS19825	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CFN79_RS19835	COG0284	orotidine-5'-phosphate decarboxylase activity
CFN79_RS19840	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CFN79_RS19850	COG0776	regulation of translation
CFN79_RS19860	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CFN79_RS19865	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CFN79_RS19875	COG3038	cytochrome b561
CFN79_RS19880	COG1609	Transcriptional regulator
CFN79_RS19885	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CFN79_RS19885	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CFN79_RS19890	COG1105	Belongs to the carbohydrate kinase PfkB family
CFN79_RS19895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CFN79_RS19895	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CFN79_RS19900	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CFN79_RS19930	COG0583	DNA-binding transcription factor activity
CFN79_RS19935	COG1024	Enoyl-CoA hydratase
CFN79_RS19950	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CFN79_RS19965	COG0523	cobalamin synthesis protein
CFN79_RS19970	COG0735	belongs to the Fur family
CFN79_RS20000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CFN79_RS20015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CFN79_RS20020	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CFN79_RS20050	COG2003	Belongs to the UPF0758 family
CFN79_RS20055	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CFN79_RS20060	COG0756	dUTP diphosphatase activity
CFN79_RS20075	COG2902	Dehydrogenase
CFN79_RS20085	COG4215	(ABC) transporter
CFN79_RS20090	COG4160	amino acid transport
CFN79_RS20100	COG4191	Histidine kinase
CFN79_RS20135	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CFN79_RS20140	COG1686	Belongs to the peptidase S11 family
CFN79_RS20145	COG2921	Belongs to the UPF0250 family
CFN79_RS20150	COG0321	lipoyl(octanoyl) transferase activity
CFN79_RS20155	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CFN79_RS20185	COG0028	Belongs to the TPP enzyme family
CFN79_RS20190	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
CFN79_RS20195	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CFN79_RS20220	COG0501	Belongs to the peptidase M48B family
CFN79_RS20225	COG0583	DNA-binding transcription factor activity
CFN79_RS20275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS20280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS20285	COG0006	proline dipeptidase activity
CFN79_RS20290	COG0217	transcriptional regulatory protein
CFN79_RS20320	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CFN79_RS20355	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CFN79_RS20360	COG1766	The M ring may be actively involved in energy transduction
CFN79_RS20365	COG1677	Flagellar hook-basal body complex protein FliE
CFN79_RS20375	COG2201	protein-glutamate methylesterase activity
CFN79_RS20380	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CFN79_RS20390	COG0583	DNA-binding transcription factor activity
CFN79_RS20410	COG2204	response regulator
CFN79_RS20430	COG0556	nucleotide-excision repair
CFN79_RS20435	COG1686	Belongs to the peptidase S11 family
CFN79_RS20450	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CFN79_RS20455	COG1881	PFAM PEBP family protein
CFN79_RS20475	COG3842	ATPase activity
CFN79_RS20480	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CFN79_RS20520	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CFN79_RS20525	COG1984	allophanate hydrolase subunit 2
CFN79_RS20530	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CFN79_RS20545	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CFN79_RS20550	COG3186	Phenylalanine-4-hydroxylase
CFN79_RS20565	COG2067	long-chain fatty acid transport protein
CFN79_RS20580	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CFN79_RS20600	COG0037	tRNA processing
CFN79_RS20605	COG0825	malonyl-CoA metabolic process
CFN79_RS20675	COG3706	GGDEF domain
CFN79_RS20680	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CFN79_RS20700	COG0312	modulator of DNA gyrase
CFN79_RS20705	COG3028	Belongs to the UPF0307 family
CFN79_RS20710	COG0521	Mo-molybdopterin cofactor biosynthetic process
CFN79_RS20715	COG0429	hydrolase of the alpha beta-hydrolase fold
CFN79_RS20735	COG0412	Dienelactone hydrolase
CFN79_RS20745	COG1278	Cold shock
CFN79_RS20775	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CFN79_RS20790	COG1280	lysine exporter protein (LysE YggA)
CFN79_RS20815	COG2239	Acts as a magnesium transporter
CFN79_RS20820	COG2199	diguanylate cyclase activity
CFN79_RS20840	COG3291	Pkd domain containing protein
CFN79_RS20855	COG2957	Belongs to the agmatine deiminase family
CFN79_RS20860	COG3920	Histidine kinase
CFN79_RS20920	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS20925	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CFN79_RS20930	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CFN79_RS20935	COG1231	oxidoreductase activity
CFN79_RS20945	COG2353	YceI-like domain
CFN79_RS20950	COG2353	YceI-like domain
CFN79_RS20955	COG3038	cytochrome b561
CFN79_RS20965	COG2226	methyltransferase
CFN79_RS20970	COG3162	membrane
CFN79_RS20975	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CFN79_RS20980	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CFN79_RS21005	COG1942	4-Oxalocrotonate Tautomerase
CFN79_RS21010	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CFN79_RS21015	COG0583	DNA-binding transcription factor activity
CFN79_RS21020	COG2878	Part of a membrane complex involved in electron transport
CFN79_RS21025	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CFN79_RS21030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CFN79_RS21040	COG0531	amino acid
CFN79_RS21055	COG0366	Alpha amylase catalytic
CFN79_RS21060	COG1263	PTS System
CFN79_RS21060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CFN79_RS21070	COG2188	Transcriptional regulator
CFN79_RS21075	COG0583	DNA-binding transcription factor activity
CFN79_RS21080	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CFN79_RS21090	COG0625	glutathione transferase activity
CFN79_RS21115	COG2841	Protein conserved in bacteria
CFN79_RS21120	COG0330	HflC and HflK could
CFN79_RS21125	COG0330	HflC and HflK could
CFN79_RS21135	COG0861	Integral membrane protein TerC family
CFN79_RS21150	COG4533	DNA binding
CFN79_RS21160	COG0840	transmembrane signaling receptor activity
CFN79_RS21165	COG0840	transmembrane signaling receptor activity
CFN79_RS21195	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CFN79_RS21205	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CFN79_RS21210	COG1137	ATPase activity
CFN79_RS21215	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CFN79_RS21220	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CFN79_RS21230	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CFN79_RS21235	COG1660	Displays ATPase and GTPase activities
CFN79_RS21240	COG0163	prenyltransferase activity
CFN79_RS21245	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CFN79_RS21255	COG4191	Histidine kinase
CFN79_RS21255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CFN79_RS21260	COG0784	Response regulator, receiver
CFN79_RS21260	COG3437	response regulator, receiver
CFN79_RS21265	COG1272	protein, Hemolysin III
CFN79_RS21270	COG0563	adenylate kinase activity
CFN79_RS21275	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CFN79_RS21280	COG2835	tetraacyldisaccharide 4'-kinase activity
CFN79_RS21285	COG1663	tetraacyldisaccharide 4'-kinase activity
CFN79_RS21290	COG0848	biopolymer transport protein
CFN79_RS21295	COG0811	peptide transport
CFN79_RS21310	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CFN79_RS21320	COG0793	Belongs to the peptidase S41A family
CFN79_RS21325	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CFN79_RS21325	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CFN79_RS21330	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CFN79_RS21350	COG0488	(ABC) transporter
CFN79_RS21360	COG4942	peptidase
CFN79_RS21370	COG0861	Integral membrane protein TerC family
CFN79_RS21395	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CFN79_RS21400	COG1053	succinate dehydrogenase
CFN79_RS21405	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CFN79_RS21410	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CFN79_RS21415	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CFN79_RS21430	COG0850	regulation of cytokinetic process
CFN79_RS21440	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CFN79_RS21445	COG0583	DNA-binding transcription factor activity
CFN79_RS21490	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CFN79_RS21500	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CFN79_RS21525	COG0251	oxidation-reduction process
CFN79_RS21530	COG0626	cystathionine gamma-synthase activity
CFN79_RS21535	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CFN79_RS21540	COG4106	trans-aconitate 2-methyltransferase activity
CFN79_RS21575	COG0482	sulfurtransferase activity
CFN79_RS21580	COG2814	Major facilitator Superfamily
CFN79_RS21585	COG0583	DNA-binding transcription factor activity
CFN79_RS21590	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS21595	COG0287	Prephenate dehydrogenase
CFN79_RS21615	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CFN79_RS21620	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CFN79_RS21625	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFN79_RS21630	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS21635	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CFN79_RS21640	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CFN79_RS21645	COG0416	fatty acid biosynthetic process
CFN79_RS21650	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CFN79_RS21655	COG1399	metal-binding, possibly nucleic acid-binding protein
CFN79_RS21660	COG0424	maF-like protein
CFN79_RS21670	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CFN79_RS21690	COG0747	negative chemotaxis
CFN79_RS21695	COG3300	MHYT domain
CFN79_RS21695	COG5001	Diguanylate cyclase
CFN79_RS21705	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CFN79_RS21705	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CFN79_RS21710	COG0509	glycine decarboxylation via glycine cleavage system
CFN79_RS21715	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CFN79_RS21720	COG0531	amino acid
CFN79_RS21725	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CFN79_RS21735	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CFN79_RS21740	COG2201	protein-glutamate methylesterase activity
CFN79_RS21745	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CFN79_RS21750	COG0840	transmembrane signaling receptor activity
CFN79_RS21760	COG2198	Histidine kinase
CFN79_RS21760	COG0643	Histidine kinase
CFN79_RS21780	COG0784	Response regulator, receiver
CFN79_RS21780	COG0835	chemotaxis
CFN79_RS21785	COG0835	chemotaxis
CFN79_RS21785	COG0784	Response regulator, receiver
CFN79_RS21790	COG0745	RESPONSE REGULATOR receiver
CFN79_RS21795	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CFN79_RS21800	COG0643	Histidine kinase
CFN79_RS21800	COG0784	Response regulator, receiver
CFN79_RS21800	COG2198	Histidine kinase
CFN79_RS21805	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CFN79_RS21810	COG1214	PFAM Peptidase M22, glycoprotease
CFN79_RS21815	COG0456	acetyltransferase
CFN79_RS21820	COG1573	uracil-dna glycosylase
CFN79_RS21825	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CFN79_RS21830	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CFN79_RS21835	COG0504	CTP synthase activity
CFN79_RS21840	COG0148	phosphopyruvate hydratase activity
CFN79_RS21845	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CFN79_RS21855	COG2914	Belongs to the UPF0125 (RnfH) family
CFN79_RS21860	COG2867	negative regulation of translational initiation
CFN79_RS21865	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CFN79_RS21875	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CFN79_RS21875	COG0519	Catalyzes the synthesis of GMP from XMP
CFN79_RS21900	COG0583	DNA-binding transcription factor activity
CFN79_RS21930	COG0590	tRNA wobble adenosine to inosine editing
CFN79_RS21935	COG1376	ErfK ybiS ycfS ynhG family protein
CFN79_RS21975	COG0415	Belongs to the DNA photolyase family
CFN79_RS21995	COG1742	UPF0060 membrane protein
CFN79_RS22010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CFN79_RS22010	COG1017	nitric oxide dioxygenase activity
CFN79_RS22015	COG3397	chitin binding
CFN79_RS22060	COG1309	transcriptional regulator
CFN79_RS22065	COG0778	Nitroreductase
CFN79_RS22070	COG1902	pentaerythritol trinitrate reductase activity
CFN79_RS22075	COG1309	transcriptional regulator
CFN79_RS22085	COG1505	serine-type exopeptidase activity
CFN79_RS22105	COG4104	PAAR repeat-containing protein
CFN79_RS22110	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CFN79_RS22115	COG0720	synthase
CFN79_RS22120	COG0602	queuosine metabolic process
CFN79_RS22135	COG3220	belongs to the UPF0276 family
CFN79_RS22150	COG0560	Phosphoserine phosphatase
CFN79_RS22160	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CFN79_RS22170	COG4689	acetoacetate decarboxylase
CFN79_RS22180	COG0673	inositol 2-dehydrogenase activity
CFN79_RS22210	COG0557	exoribonuclease II activity
CFN79_RS22235	COG0642	Histidine kinase
CFN79_RS22245	COG1840	ABC-type Fe3 transport system, periplasmic component
CFN79_RS22250	COG4208	sulfate ABC transporter
CFN79_RS22255	COG3842	ATPase activity
CFN79_RS22260	COG0477	Major facilitator Superfamily
CFN79_RS22285	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CFN79_RS22290	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CFN79_RS22295	COG0330	HflC and HflK could
CFN79_RS22300	COG0330	HflC and HflK could
CFN79_RS22305	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CFN79_RS22310	COG1923	regulation of RNA biosynthetic process
CFN79_RS22315	COG1160	GTP binding
CFN79_RS22320	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CFN79_RS22330	COG0124	histidyl-tRNA synthetase
CFN79_RS22335	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CFN79_RS22350	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CFN79_RS22355	COG0105	UTP biosynthetic process
CFN79_RS22375	COG2807	transmembrane transport
CFN79_RS22385	COG1022	Amp-dependent synthetase and ligase
CFN79_RS22400	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CFN79_RS22425	COG2974	May be involved in recombination
CFN79_RS22430	COG0753	catalase activity
CFN79_RS22440	COG3384	dioxygenase
CFN79_RS22445	COG0167	dihydroorotate dehydrogenase activity
CFN79_RS22450	COG2193	ferroxidase activity
CFN79_RS22455	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CFN79_RS22465	COG0717	Belongs to the dCTP deaminase family
CFN79_RS22470	COG0386	Belongs to the glutathione peroxidase family
CFN79_RS22485	COG3012	SEC-C Motif Domain Protein
CFN79_RS22500	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CFN79_RS22505	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CFN79_RS22525	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CFN79_RS22530	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CFN79_RS22535	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CFN79_RS22540	COG0196	riboflavin kinase activity
CFN79_RS22555	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CFN79_RS22560	COG0175	sulfate reduction
CFN79_RS22565	COG0583	DNA-binding transcription factor activity
CFN79_RS22570	COG1028	Short-chain dehydrogenase reductase Sdr
CFN79_RS22575	COG0488	(ABC) transporter
CFN79_RS22580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CFN79_RS22585	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CFN79_RS22595	COG2850	peptidyl-arginine hydroxylation
CFN79_RS22615	COG2239	Acts as a magnesium transporter
CFN79_RS22620	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CFN79_RS22625	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CFN79_RS22635	COG0174	glutamine synthetase
CFN79_RS22645	COG3852	Histidine kinase
CFN79_RS22670	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CFN79_RS22695	COG0583	DNA-binding transcription factor activity
CFN79_RS22700	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CFN79_RS22710	COG1346	cytolysis
CFN79_RS22715	COG1380	Effector of murein hydrolase LrgA
CFN79_RS22720	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CFN79_RS22735	COG0494	nUDIX hydrolase
CFN79_RS22755	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CFN79_RS22760	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CFN79_RS22770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CFN79_RS22770	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CFN79_RS22780	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CFN79_RS22785	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CFN79_RS22800	COG0583	DNA-binding transcription factor activity
CFN79_RS22805	COG1247	-acetyltransferase
CFN79_RS22815	COG1247	-acetyltransferase
CFN79_RS22835	COG1115	amino acid carrier protein
CFN79_RS22845	COG0584	glycerophosphoryl diester phosphodiesterase
CFN79_RS22850	COG3842	ATPase activity
CFN79_RS22855	COG0395	ABC-type sugar transport system, permease component
CFN79_RS22860	COG1175	transmembrane transport
CFN79_RS22870	COG1294	oxidase, subunit
CFN79_RS22875	COG1271	oxidase subunit
CFN79_RS22890	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CFN79_RS22895	COG0456	acetyltransferase
CFN79_RS22900	COG0359	binds to the 23S rRNA
CFN79_RS22905	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CFN79_RS22915	COG0360	Binds together with S18 to 16S ribosomal RNA
CFN79_RS22930	COG1937	Protein conserved in bacteria
CFN79_RS22955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CFN79_RS22960	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CFN79_RS22965	COG0840	transmembrane signaling receptor activity
CFN79_RS22975	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CFN79_RS23005	COG1278	Cold shock
CFN79_RS23010	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CFN79_RS23015	COG0542	response to heat
CFN79_RS23025	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CFN79_RS23030	COG0335	large ribosomal subunit rRNA binding
CFN79_RS23035	COG0336	Belongs to the RNA methyltransferase TrmD family
CFN79_RS23040	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CFN79_RS23045	COG0228	four-way junction DNA binding
CFN79_RS23050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CFN79_RS23050	COG1042	CoA-binding domain protein
CFN79_RS23050	COG0045	succinate-CoA ligase (ADP-forming) activity
CFN79_RS23055	COG1230	cation diffusion facilitator family transporter
CFN79_RS23060	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate