CJF12_RS00040	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS00045	SM00400	zinc finger
CJF12_RS00045	SM00493	CJF12_RS00045
CJF12_RS00075	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS00080	SM00400	zinc finger
CJF12_RS00080	SM00493	CJF12_RS00080
CJF12_RS00120	SM00400	zinc finger
CJF12_RS00170	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS00175	SM00400	zinc finger
CJF12_RS00175	SM00493	CJF12_RS00175
CJF12_RS00220	SM00857	Resolvase, N terminal domain
CJF12_RS00235	SM00563	Phosphate acyltransferases
CJF12_RS00250	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CJF12_RS00315	SM01290	CJF12_RS00315
CJF12_RS00345	SM00327	von Willebrand factor (vWF) type A domain
CJF12_RS00350	SM00327	von Willebrand factor (vWF) type A domain
CJF12_RS00355	SM00028	Tetratricopeptide repeats
CJF12_RS00385	SM00563	Phosphate acyltransferases
CJF12_RS00425	SM00534	ATPase domain of DNA mismatch repair MUTS family
CJF12_RS00435	SM00986	Uracil DNA glycosylase superfamily
CJF12_RS00435	SM00987	UreE urease accessory protein, C-terminal domain 
CJF12_RS00570	SM00996	S-adenosyl-L-homocysteine hydrolase
CJF12_RS00570	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CJF12_RS00705	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS00740	SM01126	CJF12_RS00740
CJF12_RS00810	SM00988	UreE urease accessory protein, N-terminal domain
CJF12_RS00895	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS00920	SM00448	cheY-homologous receiver domain
CJF12_RS00925	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS00985	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01060	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS01060	SM00448	cheY-homologous receiver domain
CJF12_RS01100	SM00487	DEAD-like helicases superfamily
CJF12_RS01120	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01145	SM00344	helix_turn_helix ASNC type
CJF12_RS01165	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01175	SM01217	CJF12_RS01175
CJF12_RS01190	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS01190	SM00930	CJF12_RS01190
CJF12_RS01205	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CJF12_RS01205	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CJF12_RS01205	SM00493	CJF12_RS01205
CJF12_RS01230	SM00354	helix_turn _helix lactose operon repressor
CJF12_RS01275	SM00986	Uracil DNA glycosylase superfamily
CJF12_RS01275	SM00987	UreE urease accessory protein, C-terminal domain 
CJF12_RS01335	SM00861	Transketolase, pyrimidine binding domain
CJF12_RS01345	SM01022	CJF12_RS01345
CJF12_RS01350	SM00458	Ricin-type beta-trefoil
CJF12_RS01380	SM00354	helix_turn _helix lactose operon repressor
CJF12_RS01405	SM00812	Alpha-L-fucosidase
CJF12_RS01440	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS01495	SM00825	Beta-ketoacyl synthase
CJF12_RS01495	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CJF12_RS01500	SM00822	CJF12_RS01500
CJF12_RS01500	SM00825	Beta-ketoacyl synthase
CJF12_RS01500	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CJF12_RS01515	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01550	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01565	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS01585	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS01670	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS01685	SM00028	Tetratricopeptide repeats
CJF12_RS01685	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS01835	SM01217	CJF12_RS01835
CJF12_RS01845	SM00998	Adenylosuccinate lyase C-terminus
CJF12_RS01855	SM01211	CJF12_RS01855
CJF12_RS01890	SM00480	DNA polymerase III beta subunit
CJF12_RS01895	SM00873	B3/4 domain
CJF12_RS01895	SM00874	tRNA synthetase B5 domain
CJF12_RS01895	SM00896	Ferredoxin-fold anticodon binding domain
CJF12_RS01940	SM00606	Cellulose Binding Domain Type IV
CJF12_RS02010	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS02015	SM00245	tail specific protease
CJF12_RS02030	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS02040	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS02085	SM00100	Cyclic nucleotide-monophosphate binding domain
CJF12_RS02160	SM00448	cheY-homologous receiver domain
CJF12_RS02160	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS02165	SM00387	Histidine kinase-like ATPases
CJF12_RS02165	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS02190	SM00271	DnaJ molecular chaperone homology domain
CJF12_RS02215	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS02240	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CJF12_RS02240	SM01232	CJF12_RS02240
CJF12_RS02245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS02250	SM00244	prohibitin homologues
CJF12_RS02270	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CJF12_RS02275	SM00028	Tetratricopeptide repeats
CJF12_RS02400	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS02405	SM00487	DEAD-like helicases superfamily
CJF12_RS02405	SM00490	helicase superfamily c-terminal domain
CJF12_RS02430	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CJF12_RS02430	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS02430	SM00732	Likely ribonuclease with RNase H fold.
CJF12_RS02450	SM00867	YceI-like domain 
CJF12_RS02465	SM00838	Elongation factor G C-terminus
CJF12_RS02490	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS02500	SM00155	Phospholipase D. Active site motifs.
CJF12_RS02515	SM00448	cheY-homologous receiver domain
CJF12_RS02515	SM00850	LytTr DNA-binding domain
CJF12_RS02530	SM00387	Histidine kinase-like ATPases
CJF12_RS02530	SM00433	TopoisomeraseII
CJF12_RS02540	SM00434	DNA Topoisomerase IV
CJF12_RS02670	SM00387	Histidine kinase-like ATPases
CJF12_RS02685	SM00060	Fibronectin type 3 domain
CJF12_RS02710	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJF12_RS02715	SM00341	Helicase and RNase D C-terminal
CJF12_RS02715	SM00487	DEAD-like helicases superfamily
CJF12_RS02715	SM00490	helicase superfamily c-terminal domain
CJF12_RS02715	SM00956	CJF12_RS02715
CJF12_RS02745	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS02770	SM00271	DnaJ molecular chaperone homology domain
CJF12_RS02780	SM00344	helix_turn_helix ASNC type
CJF12_RS02800	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS02845	SM00341	Helicase and RNase D C-terminal
CJF12_RS02930	SM00642	Alpha-amylase domain
CJF12_RS02965	SM00479	CJF12_RS02965
CJF12_RS03010	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS03075	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS03075	SM00962	SRP54-type protein, GTPase domain
CJF12_RS03075	SM00963	SRP54-type protein, helical bundle domain
CJF12_RS03115	SM01091	Transporter associated domain
CJF12_RS03185	SM00893	Electron transfer flavoprotein domain
CJF12_RS03190	SM00893	Electron transfer flavoprotein domain
CJF12_RS03225	SM00042	Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein.
CJF12_RS03315	SM00434	DNA Topoisomerase IV
CJF12_RS03340	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS03415	SM01006	Siderophore biosynthesis protein domain
CJF12_RS03435	SM00904	Riboflavin kinase
CJF12_RS03440	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS03455	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS03460	SM00047	Lysozyme subfamily 2
CJF12_RS03570	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS03585	SM00529	Helix-turn-helix diphteria tox regulatory element
CJF12_RS03630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CJF12_RS03640	SM00014	Acid phosphatase homologues
CJF12_RS03685	SM00448	cheY-homologous receiver domain
CJF12_RS03685	SM00850	LytTr DNA-binding domain
CJF12_RS03695	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS03730	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS03830	SM01130	CJF12_RS03830
CJF12_RS03835	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS03840	SM01011	Aminopeptidase P, N-terminal domain
CJF12_RS03880	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CJF12_RS03885	SM00448	cheY-homologous receiver domain
CJF12_RS03885	SM00850	LytTr DNA-binding domain
CJF12_RS03910	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS03930	SM00420	helix_turn_helix, Deoxyribose operon repressor
CJF12_RS03930	SM01134	CJF12_RS03930
CJF12_RS03965	SM00014	Acid phosphatase homologues
CJF12_RS03985	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS04055	SM00448	cheY-homologous receiver domain
CJF12_RS04055	SM00850	LytTr DNA-binding domain
CJF12_RS04075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS04125	SM00448	cheY-homologous receiver domain
CJF12_RS04125	SM00850	LytTr DNA-binding domain
CJF12_RS04160	SM00831	Cation transporter/ATPase, N-terminus
CJF12_RS04170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CJF12_RS04170	SM00387	Histidine kinase-like ATPases
CJF12_RS04170	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS04175	SM00448	cheY-homologous receiver domain
CJF12_RS04175	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS04180	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJF12_RS04200	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS04200	SM00876	Biotin and Thiamin Synthesis associated domain
CJF12_RS04220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS04240	SM01006	Siderophore biosynthesis protein domain
CJF12_RS04280	SM01059	Chloramphenicol acetyltransferase
CJF12_RS04305	SM00354	helix_turn _helix lactose operon repressor
CJF12_RS04350	SM01276	CJF12_RS04350
CJF12_RS04385	SM00812	Alpha-L-fucosidase
CJF12_RS04400	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS04410	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS04435	SM00487	DEAD-like helicases superfamily
CJF12_RS04435	SM00490	helicase superfamily c-terminal domain
CJF12_RS04450	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS04460	SM00100	Cyclic nucleotide-monophosphate binding domain
CJF12_RS04460	SM00419	helix_turn_helix, cAMP Regulatory protein
CJF12_RS04470	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS04495	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS04580	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS04625	SM01130	CJF12_RS04625
CJF12_RS04635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS04645	SM00014	Acid phosphatase homologues
CJF12_RS04670	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS04675	SM00448	cheY-homologous receiver domain
CJF12_RS04675	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS04685	SM00100	Cyclic nucleotide-monophosphate binding domain
CJF12_RS04685	SM00419	helix_turn_helix, cAMP Regulatory protein
CJF12_RS04695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS04720	SM00487	DEAD-like helicases superfamily
CJF12_RS04720	SM00490	helicase superfamily c-terminal domain
CJF12_RS04730	SM00363	S4 RNA-binding domain
CJF12_RS04790	SM00060	Fibronectin type 3 domain
CJF12_RS04800	SM00060	Fibronectin type 3 domain
CJF12_RS04830	SM01329	CJF12_RS04830
CJF12_RS04865	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CJF12_RS04885	SM00108	Bulb-type mannose-specific lectin
CJF12_RS05025	SM00850	LytTr DNA-binding domain
CJF12_RS05030	SM00248	ankyrin repeats
CJF12_RS05075	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS05085	SM00347	helix_turn_helix multiple antibiotic resistance protein
CJF12_RS05150	SM00244	prohibitin homologues
CJF12_RS05190	SM00843	CJF12_RS05190
CJF12_RS05275	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS05280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CJF12_RS05330	SM00245	tail specific protease
CJF12_RS05365	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS05390	SM00420	helix_turn_helix, Deoxyribose operon repressor
CJF12_RS05390	SM01134	CJF12_RS05390
CJF12_RS05480	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS05510	SM00360	RNA recognition motif
CJF12_RS05520	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS05545	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS05545	SM00448	cheY-homologous receiver domain
CJF12_RS05585	SM00354	helix_turn _helix lactose operon repressor
CJF12_RS05630	SM00365	Leucine-rich repeat, SDS22-like subfamily
CJF12_RS05630	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CJF12_RS05725	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS05785	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS05915	SM00812	Alpha-L-fucosidase
CJF12_RS05920	SM00562	CJF12_RS05920
CJF12_RS05930	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS05940	SM00830	Chorismate mutase type II
CJF12_RS05970	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS05975	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS06020	SM00098	Alkaline phosphatase homologues
CJF12_RS06050	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS06115	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS06190	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS06195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS06200	SM00852	Probable molybdopterin binding domain
CJF12_RS06215	SM00450	Rhodanese Homology Domain
CJF12_RS06290	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS06360	SM00448	cheY-homologous receiver domain
CJF12_RS06370	SM00138	Methyltransferase, chemotaxis proteins 
CJF12_RS06375	SM00448	cheY-homologous receiver domain
CJF12_RS06380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CJF12_RS06380	SM00387	Histidine kinase-like ATPases
CJF12_RS06380	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS06380	SM00448	cheY-homologous receiver domain
CJF12_RS06385	SM00387	Histidine kinase-like ATPases
CJF12_RS06385	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS06385	SM00448	cheY-homologous receiver domain
CJF12_RS06440	SM01276	CJF12_RS06440
CJF12_RS06455	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS06460	SM01321	CJF12_RS06460
CJF12_RS06555	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS06565	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS06580	SM00028	Tetratricopeptide repeats
CJF12_RS06670	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS06695	SM00851	MGS-like domain
CJF12_RS06695	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CJF12_RS06705	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CJF12_RS06715	SM00344	helix_turn_helix ASNC type
CJF12_RS06745	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CJF12_RS06790	SM00448	cheY-homologous receiver domain
CJF12_RS06810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS06810	SM00954	Region found in RelA / SpoT proteins
CJF12_RS06835	SM00028	Tetratricopeptide repeats
CJF12_RS06840	SM00014	Acid phosphatase homologues
CJF12_RS06875	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS06980	SM00487	DEAD-like helicases superfamily
CJF12_RS06980	SM00490	helicase superfamily c-terminal domain
CJF12_RS07025	SM01209	CJF12_RS07025
CJF12_RS07025	SM01210	CJF12_RS07025
CJF12_RS07030	SM00798	AICARFT/IMPCHase bienzyme
CJF12_RS07030	SM00851	MGS-like domain
CJF12_RS07070	SM00642	Alpha-amylase domain
CJF12_RS07140	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS07160	SM00226	Low molecular weight phosphatase family
CJF12_RS07165	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS07165	SM00760	Bacterial dnaA protein helix-turn-helix domain
CJF12_RS07200	SM01234	CJF12_RS07200
CJF12_RS07295	SM00322	K homology RNA-binding domain
CJF12_RS07295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS07370	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CJF12_RS07395	SM00387	Histidine kinase-like ATPases
CJF12_RS07395	SM00433	TopoisomeraseII
CJF12_RS07535	SM00347	helix_turn_helix multiple antibiotic resistance protein
CJF12_RS07565	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS07625	SM00318	Staphylococcal nuclease homologues
CJF12_RS07630	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS07665	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CJF12_RS07680	SM00487	DEAD-like helicases superfamily
CJF12_RS07680	SM00490	helicase superfamily c-terminal domain
CJF12_RS07745	SM00882	Coenzyme A transferase
CJF12_RS07775	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS07800	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS07805	SM00487	DEAD-like helicases superfamily
CJF12_RS07805	SM00490	helicase superfamily c-terminal domain
CJF12_RS07825	SM00422	helix_turn_helix, mercury resistance
CJF12_RS07840	SM00363	S4 RNA-binding domain
CJF12_RS07865	SM00650	Ribosomal RNA adenine dimethylases
CJF12_RS07875	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CJF12_RS07990	SM00060	Fibronectin type 3 domain
CJF12_RS07995	SM00479	CJF12_RS07995
CJF12_RS07995	SM00481	DNA polymerase alpha chain like domain
CJF12_RS08000	SM00861	Transketolase, pyrimidine binding domain
CJF12_RS08010	SM00344	helix_turn_helix ASNC type
CJF12_RS08025	SM00458	Ricin-type beta-trefoil
CJF12_RS08045	SM00981	CJF12_RS08045
CJF12_RS08080	SM00946	Prolyl-tRNA synthetase, C-terminal
CJF12_RS08100	SM00271	DnaJ molecular chaperone homology domain
CJF12_RS08130	SM00937	CJF12_RS08130
CJF12_RS08145	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS08180	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CJF12_RS08240	SM00400	zinc finger
CJF12_RS08240	SM00493	CJF12_RS08240
CJF12_RS08250	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CJF12_RS08250	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CJF12_RS08265	SM00448	cheY-homologous receiver domain
CJF12_RS08265	SM00850	LytTr DNA-binding domain
CJF12_RS08305	SM00867	YceI-like domain 
CJF12_RS08310	SM00867	YceI-like domain 
CJF12_RS08340	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS08340	SM00322	K homology RNA-binding domain
CJF12_RS08350	SM01387	CJF12_RS08350
CJF12_RS08360	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJF12_RS08360	SM00924	MgtE intracellular N domain
CJF12_RS08380	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS08395	SM00478	endonuclease III
CJF12_RS08450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS08480	SM00487	DEAD-like helicases superfamily
CJF12_RS08485	SM00357	Cold shock protein domain
CJF12_RS08490	SM00357	Cold shock protein domain
CJF12_RS08525	SM00450	Rhodanese Homology Domain
CJF12_RS08555	SM00478	endonuclease III
CJF12_RS08555	SM00525	CJF12_RS08555
CJF12_RS08590	SM00636	CJF12_RS08590
CJF12_RS08595	SM00852	Probable molybdopterin binding domain
CJF12_RS08605	SM00448	cheY-homologous receiver domain
CJF12_RS08605	SM00850	LytTr DNA-binding domain
CJF12_RS08610	SM00028	Tetratricopeptide repeats
CJF12_RS08625	SM00327	von Willebrand factor (vWF) type A domain
CJF12_RS08655	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS08665	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS08690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJF12_RS08755	SM00028	Tetratricopeptide repeats
CJF12_RS08755	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS08785	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS08855	SM00823	Phosphopantetheine attachment site
CJF12_RS08865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CJF12_RS08870	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS08970	SM00470	ParB-like nuclease domain
CJF12_RS08985	SM00788	Adenylosuccinate synthetase
CJF12_RS08995	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS09020	SM00487	DEAD-like helicases superfamily
CJF12_RS09020	SM00490	helicase superfamily c-terminal domain
CJF12_RS09070	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS09180	SM00822	CJF12_RS09180
CJF12_RS09195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CJF12_RS09195	SM00292	breast cancer carboxy-terminal domain
CJF12_RS09195	SM00532	Ligase N family
CJF12_RS09275	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS09275	SM00448	cheY-homologous receiver domain
CJF12_RS09310	SM00091	PAS domain
CJF12_RS09310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CJF12_RS09310	SM00387	Histidine kinase-like ATPases
CJF12_RS09310	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS09365	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CJF12_RS09365	SM00474	3'-5' exonuclease
CJF12_RS09365	SM00475	5'-3' exonuclease
CJF12_RS09365	SM00482	DNA polymerase A domain
CJF12_RS09375	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CJF12_RS09435	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS09435	SM01086	C-terminal, D2-small domain, of ClpB protein
CJF12_RS09465	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS09470	SM00411	bacterial (prokaryotic) histone like domain
CJF12_RS09475	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS09495	SM00563	Phosphate acyltransferases
CJF12_RS09535	SM01126	CJF12_RS09535
CJF12_RS09680	SM00903	Flavin reductase like domain
CJF12_RS09760	SM00493	CJF12_RS09760
CJF12_RS09800	SM00867	YceI-like domain 
CJF12_RS09805	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS09820	SM01290	CJF12_RS09820
CJF12_RS09890	SM00861	Transketolase, pyrimidine binding domain
CJF12_RS09915	SM00344	helix_turn_helix ASNC type
CJF12_RS09955	SM00870	CJF12_RS09955
CJF12_RS10005	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS10115	SM00363	S4 RNA-binding domain
CJF12_RS10130	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS10195	SM00487	DEAD-like helicases superfamily
CJF12_RS10195	SM00490	helicase superfamily c-terminal domain
CJF12_RS10200	SM00448	cheY-homologous receiver domain
CJF12_RS10205	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS10215	SM01130	CJF12_RS10215
CJF12_RS10345	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS10420	SM00244	prohibitin homologues
CJF12_RS10465	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS10580	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS10620	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS10695	SM00060	Fibronectin type 3 domain
CJF12_RS10755	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CJF12_RS10765	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CJF12_RS10845	SM00732	Likely ribonuclease with RNase H fold.
CJF12_RS10850	SM00855	Phosphoglycerate mutase family
CJF12_RS10895	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS10905	SM00363	S4 RNA-binding domain
CJF12_RS10910	SM00740	CJF12_RS10910
CJF12_RS11035	SM00867	YceI-like domain 
CJF12_RS11065	SM00465	GIY-YIG type nucleases (URI domain)
CJF12_RS11085	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CJF12_RS11165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CJF12_RS11215	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS11235	SM00919	Malic enzyme, NAD binding domain
CJF12_RS11235	SM01274	CJF12_RS11235
CJF12_RS11255	SM00563	Phosphate acyltransferases
CJF12_RS11270	SM00756	CJF12_RS11270
CJF12_RS11275	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS11310	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS11310	SM00994	ClpX C4-type zinc finger
CJF12_RS11310	SM01086	C-terminal, D2-small domain, of ClpB protein
CJF12_RS11500	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS11500	SM01086	C-terminal, D2-small domain, of ClpB protein
CJF12_RS11515	SM00387	Histidine kinase-like ATPases
CJF12_RS11520	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS11520	SM00448	cheY-homologous receiver domain
CJF12_RS11530	SM00014	Acid phosphatase homologues
CJF12_RS11550	SM00387	Histidine kinase-like ATPases
CJF12_RS11550	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS11555	SM00448	cheY-homologous receiver domain
CJF12_RS11555	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS11585	SM00387	Histidine kinase-like ATPases
CJF12_RS11585	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS11590	SM00448	cheY-homologous receiver domain
CJF12_RS11590	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS11700	SM01126	CJF12_RS11700
CJF12_RS11755	SM01065	Starch binding domain
CJF12_RS11765	SM00840	CJF12_RS11765
CJF12_RS11845	SM01018	B12 binding domain
CJF12_RS11950	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS12020	SM01192	CJF12_RS12020
CJF12_RS12020	SM01193	CJF12_RS12020
CJF12_RS12040	SM00662	RNA polymerases D
CJF12_RS12045	SM00363	S4 RNA-binding domain
CJF12_RS12045	SM01390	CJF12_RS12045
CJF12_RS12120	SM01374	CJF12_RS12120
CJF12_RS12140	SM00322	K homology RNA-binding domain
CJF12_RS12155	SM01382	CJF12_RS12155
CJF12_RS12155	SM01383	CJF12_RS12155
CJF12_RS12175	SM00420	helix_turn_helix, Deoxyribose operon repressor
CJF12_RS12175	SM01134	CJF12_RS12175
CJF12_RS12240	SM01403	CJF12_RS12240
CJF12_RS12245	SM00838	Elongation factor G C-terminus
CJF12_RS12245	SM00889	Elongation factor G, domain IV
CJF12_RS12300	SM00387	Histidine kinase-like ATPases
CJF12_RS12300	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS12305	SM00448	cheY-homologous receiver domain
CJF12_RS12305	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS12340	SM00450	Rhodanese Homology Domain
CJF12_RS12365	SM00646	CJF12_RS12365
CJF12_RS12400	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS12405	SM00671	Sel1-like repeats.
CJF12_RS12410	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS12415	SM00895	CJF12_RS12415
CJF12_RS12595	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS12615	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CJF12_RS12620	SM00257	Lysin motif
CJF12_RS12700	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS12810	SM00947	Carbonic anhydrase
CJF12_RS12825	SM00947	Carbonic anhydrase
CJF12_RS12860	SM00487	DEAD-like helicases superfamily
CJF12_RS12860	SM00490	helicase superfamily c-terminal domain
CJF12_RS12860	SM00982	CJF12_RS12860
CJF12_RS12860	SM01058	CarD-like/TRCF domain
CJF12_RS12955	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CJF12_RS13035	SM00357	Cold shock protein domain
CJF12_RS13035	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13050	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13085	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13150	SM00387	Histidine kinase-like ATPases
CJF12_RS13150	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS13155	SM00448	cheY-homologous receiver domain
CJF12_RS13155	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS13200	SM00812	Alpha-L-fucosidase
CJF12_RS13210	SM01149	CJF12_RS13210
CJF12_RS13240	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS13245	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS13270	SM00825	Beta-ketoacyl synthase
CJF12_RS13380	SM00387	Histidine kinase-like ATPases
CJF12_RS13385	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13385	SM00448	cheY-homologous receiver domain
CJF12_RS13400	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13455	SM01230	CJF12_RS13455
CJF12_RS13535	SM01400	CJF12_RS13535
CJF12_RS13665	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13690	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CJF12_RS13765	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS13785	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13795	SM00344	helix_turn_helix ASNC type
CJF12_RS13820	SM00829	Enoylreductase
CJF12_RS13845	SM00450	Rhodanese Homology Domain
CJF12_RS13905	SM00448	cheY-homologous receiver domain
CJF12_RS13925	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS13975	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CJF12_RS13975	SM00534	ATPase domain of DNA mismatch repair MUTS family
CJF12_RS14075	SM00478	endonuclease III
CJF12_RS14150	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS14150	SM01086	C-terminal, D2-small domain, of ClpB protein
CJF12_RS14165	SM00448	cheY-homologous receiver domain
CJF12_RS14165	SM00850	LytTr DNA-binding domain
CJF12_RS14210	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJF12_RS14210	SM00245	tail specific protease
CJF12_RS14240	SM01240	CJF12_RS14240
CJF12_RS14245	SM00822	CJF12_RS14245
CJF12_RS14270	SM01005	Alanine racemase, C-terminal domain
CJF12_RS14285	SM01228	CJF12_RS14285
CJF12_RS14310	SM00316	Ribosomal protein S1-like RNA-binding domain
CJF12_RS14310	SM00357	Cold shock protein domain
CJF12_RS14310	SM00955	CJF12_RS14310
CJF12_RS14345	SM00028	Tetratricopeptide repeats
CJF12_RS14490	SM00899	CJF12_RS14490
CJF12_RS14515	SM00829	Enoylreductase
CJF12_RS14520	SM00028	Tetratricopeptide repeats
CJF12_RS14525	SM01126	CJF12_RS14525
CJF12_RS14610	SM00248	ankyrin repeats
CJF12_RS14670	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS14675	SM00448	cheY-homologous receiver domain
CJF12_RS14675	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS14680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CJF12_RS14680	SM00387	Histidine kinase-like ATPases
CJF12_RS14680	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS14695	SM01340	CJF12_RS14695
CJF12_RS14735	SM01038	Beta galactosidase small chain
CJF12_RS14755	SM00864	Tubulin/FtsZ family, GTPase domain
CJF12_RS14755	SM00865	Tubulin/FtsZ family, C-terminal domain
CJF12_RS14760	SM00842	Cell division protein FtsA
CJF12_RS14805	SM00740	CJF12_RS14805
CJF12_RS14885	SM00957	SecA DEAD-like domain
CJF12_RS14885	SM00958	SecA preprotein cross-linking domain
CJF12_RS14975	SM00487	DEAD-like helicases superfamily
CJF12_RS14975	SM00490	helicase superfamily c-terminal domain
CJF12_RS15050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJF12_RS15050	SM00245	tail specific protease
CJF12_RS15080	SM00450	Rhodanese Homology Domain
CJF12_RS15085	SM00450	Rhodanese Homology Domain
CJF12_RS15085	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS15105	SM00479	CJF12_RS15105
CJF12_RS15125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS15135	SM00028	Tetratricopeptide repeats
CJF12_RS15140	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS15195	SM01409	CJF12_RS15195
CJF12_RS15220	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS15260	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS15270	SM00642	Alpha-amylase domain
CJF12_RS15315	SM00937	CJF12_RS15315
CJF12_RS15390	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS15420	SM00710	Parallel beta-helix repeats
CJF12_RS15445	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS15445	SM00464	Found in ATP-dependent protease La (LON)
CJF12_RS15545	SM00100	Cyclic nucleotide-monophosphate binding domain
CJF12_RS15545	SM00419	helix_turn_helix, cAMP Regulatory protein
CJF12_RS15590	SM00876	Biotin and Thiamin Synthesis associated domain
CJF12_RS15665	SM01235	CJF12_RS15665
CJF12_RS15690	SM01060	CJF12_RS15690
CJF12_RS15730	SM00448	cheY-homologous receiver domain
CJF12_RS15730	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS15740	SM00387	Histidine kinase-like ATPases
CJF12_RS15740	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS15810	SM00822	CJF12_RS15810
CJF12_RS15815	SM00825	Beta-ketoacyl synthase
CJF12_RS15850	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS15890	SM01260	CJF12_RS15890
CJF12_RS15895	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS15935	SM00825	Beta-ketoacyl synthase
CJF12_RS15950	SM00825	Beta-ketoacyl synthase
CJF12_RS15965	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS16000	SM00563	Phosphate acyltransferases
CJF12_RS16065	SM00935	Outer membrane protein (OmpH-like)
CJF12_RS16070	SM00935	Outer membrane protein (OmpH-like)
CJF12_RS16245	SM00098	Alkaline phosphatase homologues
CJF12_RS16250	SM00148	Phospholipase C, catalytic domain (part); domain X
CJF12_RS16305	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJF12_RS16305	SM01240	CJF12_RS16305
CJF12_RS16530	SM00878	Biotin carboxylase C-terminal domain
CJF12_RS16560	SM00387	Histidine kinase-like ATPases
CJF12_RS16560	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS16570	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS16590	SM00155	Phospholipase D. Active site motifs.
CJF12_RS16620	SM00977	TilS substrate C-terminal domain
CJF12_RS16705	SM00028	Tetratricopeptide repeats
CJF12_RS16720	SM00712	DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.
CJF12_RS16725	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS16740	SM01323	CJF12_RS16740
CJF12_RS16765	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CJF12_RS16775	SM00788	Adenylosuccinate synthetase
CJF12_RS16855	SM00060	Fibronectin type 3 domain
CJF12_RS16870	SM00060	Fibronectin type 3 domain
CJF12_RS16880	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS16890	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS16930	SM00825	Beta-ketoacyl synthase
CJF12_RS16940	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS16945	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS16995	SM00245	tail specific protease
CJF12_RS17015	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS17055	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS17120	SM00448	cheY-homologous receiver domain
CJF12_RS17120	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS17125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CJF12_RS17125	SM00387	Histidine kinase-like ATPases
CJF12_RS17125	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS17160	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CJF12_RS17160	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CJF12_RS17180	SM00649	Ribosomal protein L11/L12
CJF12_RS17220	SM00663	RNA polymerase I subunit A N-terminus
CJF12_RS17255	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS17255	SM00871	Bacterial transcription activator, effector binding domain
CJF12_RS17260	SM00829	Enoylreductase
CJF12_RS17280	SM00642	Alpha-amylase domain
CJF12_RS17370	SM00387	Histidine kinase-like ATPases
CJF12_RS17370	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS17375	SM00448	cheY-homologous receiver domain
CJF12_RS17375	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS17430	SM00612	CJF12_RS17430
CJF12_RS17455	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS17460	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS17475	SM00883	Chaperonin 10 Kd subunit
CJF12_RS17500	SM00448	cheY-homologous receiver domain
CJF12_RS17500	SM00850	LytTr DNA-binding domain
CJF12_RS17560	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS17570	SM00867	YceI-like domain 
CJF12_RS17620	SM00836	DALR anticodon binding domain
CJF12_RS17620	SM01016	Arginyl tRNA synthetase N terminal dom
CJF12_RS17650	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS17710	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS17730	SM00387	Histidine kinase-like ATPases
CJF12_RS17735	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS17745	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS17750	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CJF12_RS17835	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS17845	SM00641	Glycosyl hydrolases family 25
CJF12_RS17865	SM00344	helix_turn_helix ASNC type
CJF12_RS17870	SM01133	CJF12_RS17870
CJF12_RS17930	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CJF12_RS17965	SM00060	Fibronectin type 3 domain
CJF12_RS18025	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18040	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18065	SM00905	Dihydroneopterin aldolase
CJF12_RS18095	SM00072	Guanylate kinase homologues.
CJF12_RS18135	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS18155	SM00849	Metallo-beta-lactamase superfamily
CJF12_RS18180	SM00932	Scaffold protein Nfu/NifU N terminal
CJF12_RS18195	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18200	SM00235	Zinc-dependent metalloprotease
CJF12_RS18220	SM00487	DEAD-like helicases superfamily
CJF12_RS18220	SM00490	helicase superfamily c-terminal domain
CJF12_RS18255	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18255	SM00962	SRP54-type protein, GTPase domain
CJF12_RS18255	SM00963	SRP54-type protein, helical bundle domain
CJF12_RS18350	SM00642	Alpha-amylase domain
CJF12_RS18360	SM01235	CJF12_RS18360
CJF12_RS18375	SM00245	tail specific protease
CJF12_RS18420	SM00530	Helix-turn-helix XRE-family like proteins 
CJF12_RS18435	SM00935	Outer membrane protein (OmpH-like)
CJF12_RS18495	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS18495	SM00448	cheY-homologous receiver domain
CJF12_RS18505	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18565	SM00479	CJF12_RS18565
CJF12_RS18610	SM00861	Transketolase, pyrimidine binding domain
CJF12_RS18660	SM00411	bacterial (prokaryotic) histone like domain
CJF12_RS18680	SM00363	S4 RNA-binding domain
CJF12_RS18725	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS18735	SM00028	Tetratricopeptide repeats
CJF12_RS18755	SM00812	Alpha-L-fucosidase
CJF12_RS18860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS18920	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS18980	SM00984	UDP binding domain
CJF12_RS19030	SM00710	Parallel beta-helix repeats
CJF12_RS19090	SM00710	Parallel beta-helix repeats
CJF12_RS19115	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJF12_RS19145	SM00448	cheY-homologous receiver domain
CJF12_RS19150	SM00245	tail specific protease
CJF12_RS19155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS19175	SM00841	Elongation factor P, C-terminal
CJF12_RS19175	SM01185	CJF12_RS19175
CJF12_RS19190	SM00881	CoA binding domain
CJF12_RS19205	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS19215	SM01004	Delta-aminolevulinic acid dehydratase
CJF12_RS19235	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS19265	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS19295	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CJF12_RS19320	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS19330	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CJF12_RS19385	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS19385	SM00448	cheY-homologous receiver domain
CJF12_RS19445	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS19450	SM01276	CJF12_RS19450
CJF12_RS19505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CJF12_RS19505	SM00387	Histidine kinase-like ATPases
CJF12_RS19505	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS19625	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJF12_RS19670	SM00060	Fibronectin type 3 domain
CJF12_RS19695	SM00047	Lysozyme subfamily 2
CJF12_RS19710	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS19735	SM00448	cheY-homologous receiver domain
CJF12_RS19735	SM00862	Transcriptional regulatory protein, C terminal
CJF12_RS19740	SM00387	Histidine kinase-like ATPases
CJF12_RS19740	SM00388	His Kinase A (phosphoacceptor) domain
CJF12_RS19750	SM00642	Alpha-amylase domain
CJF12_RS19800	SM00342	helix_turn_helix, arabinose operon control protein
CJF12_RS19820	SM00271	DnaJ molecular chaperone homology domain
CJF12_RS19865	SM00382	ATPases associated with a variety of cellular activities
CJF12_RS19880	SM00421	helix_turn_helix, Lux Regulon
CJF12_RS19900	SM00382	ATPases associated with a variety of cellular activities
