CJF12_RS00035 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS00040 SM00400 zinc finger CJF12_RS00040 SM00493 CJF12_RS00040 CJF12_RS00070 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS00075 SM00400 zinc finger CJF12_RS00075 SM00493 CJF12_RS00075 CJF12_RS00115 SM00400 zinc finger CJF12_RS00165 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS00170 SM00400 zinc finger CJF12_RS00170 SM00493 CJF12_RS00170 CJF12_RS00215 SM00857 Resolvase, N terminal domain CJF12_RS00230 SM00563 Phosphate acyltransferases CJF12_RS00245 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJF12_RS00300 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJF12_RS00310 SM01290 CJF12_RS00310 CJF12_RS00340 SM00327 von Willebrand factor (vWF) type A domain CJF12_RS00345 SM00327 von Willebrand factor (vWF) type A domain CJF12_RS00350 SM00028 Tetratricopeptide repeats CJF12_RS00380 SM00563 Phosphate acyltransferases CJF12_RS00415 SM00534 ATPase domain of DNA mismatch repair MUTS family CJF12_RS00425 SM00986 Uracil DNA glycosylase superfamily CJF12_RS00425 SM00987 UreE urease accessory protein, C-terminal domain CJF12_RS00545 SM01001 AIR carboxylase CJF12_RS00560 SM00996 S-adenosyl-L-homocysteine hydrolase CJF12_RS00560 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJF12_RS00695 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS00730 SM01126 CJF12_RS00730 CJF12_RS00800 SM00988 UreE urease accessory protein, N-terminal domain CJF12_RS00835 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS00885 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS00910 SM00448 cheY-homologous receiver domain CJF12_RS00915 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS00975 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01045 SM00421 helix_turn_helix, Lux Regulon CJF12_RS01045 SM00448 cheY-homologous receiver domain CJF12_RS01085 SM00487 DEAD-like helicases superfamily CJF12_RS01105 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01130 SM00344 helix_turn_helix ASNC type CJF12_RS01150 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01160 SM01217 CJF12_RS01160 CJF12_RS01175 SM00382 ATPases associated with a variety of cellular activities CJF12_RS01175 SM00930 CJF12_RS01175 CJF12_RS01190 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJF12_RS01190 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJF12_RS01190 SM00493 CJF12_RS01190 CJF12_RS01215 SM00354 helix_turn _helix lactose operon repressor CJF12_RS01260 SM00986 Uracil DNA glycosylase superfamily CJF12_RS01260 SM00987 UreE urease accessory protein, C-terminal domain CJF12_RS01320 SM00861 Transketolase, pyrimidine binding domain CJF12_RS01330 SM01022 CJF12_RS01330 CJF12_RS01335 SM00458 Ricin-type beta-trefoil CJF12_RS01365 SM00354 helix_turn _helix lactose operon repressor CJF12_RS01390 SM00812 Alpha-L-fucosidase CJF12_RS01425 SM00382 ATPases associated with a variety of cellular activities CJF12_RS01475 SM00825 Beta-ketoacyl synthase CJF12_RS01475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJF12_RS01480 SM00822 CJF12_RS01480 CJF12_RS01480 SM00825 Beta-ketoacyl synthase CJF12_RS01480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJF12_RS01495 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01530 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01545 SM00382 ATPases associated with a variety of cellular activities CJF12_RS01565 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS01635 SM01360 CJF12_RS01635 CJF12_RS01650 SM00382 ATPases associated with a variety of cellular activities CJF12_RS01665 SM00028 Tetratricopeptide repeats CJF12_RS01665 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01815 SM01217 CJF12_RS01815 CJF12_RS01825 SM00998 Adenylosuccinate lyase C-terminus CJF12_RS01835 SM01211 CJF12_RS01835 CJF12_RS01870 SM00480 DNA polymerase III beta subunit CJF12_RS01875 SM00873 B3/4 domain CJF12_RS01875 SM00874 tRNA synthetase B5 domain CJF12_RS01875 SM00896 Ferredoxin-fold anticodon binding domain CJF12_RS01920 SM00606 Cellulose Binding Domain Type IV CJF12_RS01990 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS01995 SM00245 tail specific protease CJF12_RS02010 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS02020 SM00849 Metallo-beta-lactamase superfamily CJF12_RS02065 SM00100 Cyclic nucleotide-monophosphate binding domain CJF12_RS02140 SM00448 cheY-homologous receiver domain CJF12_RS02140 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS02145 SM00387 Histidine kinase-like ATPases CJF12_RS02145 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS02170 SM00271 DnaJ molecular chaperone homology domain CJF12_RS02190 SM00382 ATPases associated with a variety of cellular activities CJF12_RS02215 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CJF12_RS02215 SM01232 CJF12_RS02215 CJF12_RS02220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS02225 SM00244 prohibitin homologues CJF12_RS02245 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CJF12_RS02250 SM00028 Tetratricopeptide repeats CJF12_RS02285 SM01350 CJF12_RS02285 CJF12_RS02370 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS02375 SM00487 DEAD-like helicases superfamily CJF12_RS02375 SM00490 helicase superfamily c-terminal domain CJF12_RS02400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJF12_RS02400 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS02400 SM00732 Likely ribonuclease with RNase H fold. CJF12_RS02420 SM00867 YceI-like domain CJF12_RS02435 SM00838 Elongation factor G C-terminus CJF12_RS02460 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS02470 SM00155 Phospholipase D. Active site motifs. CJF12_RS02485 SM00448 cheY-homologous receiver domain CJF12_RS02485 SM00850 LytTr DNA-binding domain CJF12_RS02500 SM00387 Histidine kinase-like ATPases CJF12_RS02500 SM00433 TopoisomeraseII CJF12_RS02510 SM00434 DNA Topoisomerase IV CJF12_RS02640 SM00387 Histidine kinase-like ATPases CJF12_RS02655 SM00060 Fibronectin type 3 domain CJF12_RS02675 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF12_RS02680 SM00341 Helicase and RNase D C-terminal CJF12_RS02680 SM00487 DEAD-like helicases superfamily CJF12_RS02680 SM00490 helicase superfamily c-terminal domain CJF12_RS02680 SM00956 CJF12_RS02680 CJF12_RS02710 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS02735 SM00271 DnaJ molecular chaperone homology domain CJF12_RS02745 SM00344 helix_turn_helix ASNC type CJF12_RS02765 SM00382 ATPases associated with a variety of cellular activities CJF12_RS02815 SM00341 Helicase and RNase D C-terminal CJF12_RS02900 SM00642 Alpha-amylase domain CJF12_RS02920 SM00861 Transketolase, pyrimidine binding domain CJF12_RS02935 SM00479 CJF12_RS02935 CJF12_RS02980 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS03045 SM00382 ATPases associated with a variety of cellular activities CJF12_RS03045 SM00962 SRP54-type protein, GTPase domain CJF12_RS03045 SM00963 SRP54-type protein, helical bundle domain CJF12_RS03085 SM01091 Transporter associated domain CJF12_RS03155 SM00893 Electron transfer flavoprotein domain CJF12_RS03160 SM00893 Electron transfer flavoprotein domain CJF12_RS03195 SM00042 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. CJF12_RS03285 SM00434 DNA Topoisomerase IV CJF12_RS03310 SM00849 Metallo-beta-lactamase superfamily CJF12_RS03380 SM01006 Siderophore biosynthesis protein domain CJF12_RS03385 SM01006 Siderophore biosynthesis protein domain CJF12_RS03405 SM00904 Riboflavin kinase CJF12_RS03410 SM00382 ATPases associated with a variety of cellular activities CJF12_RS03425 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS03430 SM00047 Lysozyme subfamily 2 CJF12_RS03540 SM00849 Metallo-beta-lactamase superfamily CJF12_RS03555 SM00529 Helix-turn-helix diphteria tox regulatory element CJF12_RS03600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJF12_RS03610 SM00014 Acid phosphatase homologues CJF12_RS03655 SM00448 cheY-homologous receiver domain CJF12_RS03655 SM00850 LytTr DNA-binding domain CJF12_RS03665 SM00382 ATPases associated with a variety of cellular activities CJF12_RS03700 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS03800 SM01130 CJF12_RS03800 CJF12_RS03805 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS03810 SM01011 Aminopeptidase P, N-terminal domain CJF12_RS03850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJF12_RS03855 SM00448 cheY-homologous receiver domain CJF12_RS03855 SM00850 LytTr DNA-binding domain CJF12_RS03880 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS03900 SM00420 helix_turn_helix, Deoxyribose operon repressor CJF12_RS03900 SM01134 CJF12_RS03900 CJF12_RS03935 SM00014 Acid phosphatase homologues CJF12_RS03955 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS04025 SM00448 cheY-homologous receiver domain CJF12_RS04025 SM00850 LytTr DNA-binding domain CJF12_RS04045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS04095 SM00448 cheY-homologous receiver domain CJF12_RS04095 SM00850 LytTr DNA-binding domain CJF12_RS04130 SM00831 Cation transporter/ATPase, N-terminus CJF12_RS04140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF12_RS04140 SM00387 Histidine kinase-like ATPases CJF12_RS04140 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS04145 SM00448 cheY-homologous receiver domain CJF12_RS04145 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS04150 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF12_RS04170 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS04170 SM00876 Biotin and Thiamin Synthesis associated domain CJF12_RS04190 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS04210 SM01006 Siderophore biosynthesis protein domain CJF12_RS04250 SM01059 Chloramphenicol acetyltransferase CJF12_RS04275 SM00354 helix_turn _helix lactose operon repressor CJF12_RS04320 SM01276 CJF12_RS04320 CJF12_RS04355 SM00812 Alpha-L-fucosidase CJF12_RS04370 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS04380 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS04405 SM00487 DEAD-like helicases superfamily CJF12_RS04405 SM00490 helicase superfamily c-terminal domain CJF12_RS04420 SM00849 Metallo-beta-lactamase superfamily CJF12_RS04430 SM00100 Cyclic nucleotide-monophosphate binding domain CJF12_RS04430 SM00419 helix_turn_helix, cAMP Regulatory protein CJF12_RS04440 SM00849 Metallo-beta-lactamase superfamily CJF12_RS04465 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS04545 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS04595 SM01130 CJF12_RS04595 CJF12_RS04605 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS04615 SM00014 Acid phosphatase homologues CJF12_RS04640 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS04645 SM00448 cheY-homologous receiver domain CJF12_RS04645 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS04655 SM00100 Cyclic nucleotide-monophosphate binding domain CJF12_RS04655 SM00419 helix_turn_helix, cAMP Regulatory protein CJF12_RS04665 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS04690 SM00487 DEAD-like helicases superfamily CJF12_RS04690 SM00490 helicase superfamily c-terminal domain CJF12_RS04700 SM00363 S4 RNA-binding domain CJF12_RS04760 SM00060 Fibronectin type 3 domain CJF12_RS04770 SM00060 Fibronectin type 3 domain CJF12_RS04795 SM01329 CJF12_RS04795 CJF12_RS04830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJF12_RS04850 SM00108 Bulb-type mannose-specific lectin CJF12_RS04990 SM00850 LytTr DNA-binding domain CJF12_RS04995 SM00248 ankyrin repeats CJF12_RS05040 SM00382 ATPases associated with a variety of cellular activities CJF12_RS05050 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF12_RS05115 SM00244 prohibitin homologues CJF12_RS05160 SM00843 CJF12_RS05160 CJF12_RS05245 SM00382 ATPases associated with a variety of cellular activities CJF12_RS05250 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF12_RS05300 SM00245 tail specific protease CJF12_RS05335 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS05360 SM00420 helix_turn_helix, Deoxyribose operon repressor CJF12_RS05360 SM01134 CJF12_RS05360 CJF12_RS05450 SM00382 ATPases associated with a variety of cellular activities CJF12_RS05480 SM00360 RNA recognition motif CJF12_RS05490 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS05515 SM00382 ATPases associated with a variety of cellular activities CJF12_RS05515 SM00448 cheY-homologous receiver domain CJF12_RS05555 SM00354 helix_turn _helix lactose operon repressor CJF12_RS05600 SM00365 Leucine-rich repeat, SDS22-like subfamily CJF12_RS05600 SM00369 Leucine-rich repeats, typical (most populated) subfamily CJF12_RS05650 SM01217 CJF12_RS05650 CJF12_RS05695 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS05755 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS05885 SM00812 Alpha-L-fucosidase CJF12_RS05890 SM00562 CJF12_RS05890 CJF12_RS05900 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS05910 SM00830 Chorismate mutase type II CJF12_RS05920 SM00382 ATPases associated with a variety of cellular activities CJF12_RS05940 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS05945 SM00421 helix_turn_helix, Lux Regulon CJF12_RS05990 SM00098 Alkaline phosphatase homologues CJF12_RS06020 SM00382 ATPases associated with a variety of cellular activities CJF12_RS06085 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS06160 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS06165 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS06170 SM00852 Probable molybdopterin binding domain CJF12_RS06185 SM00450 Rhodanese Homology Domain CJF12_RS06260 SM00382 ATPases associated with a variety of cellular activities CJF12_RS06305 SM00448 cheY-homologous receiver domain CJF12_RS06315 SM00138 Methyltransferase, chemotaxis proteins CJF12_RS06320 SM00448 cheY-homologous receiver domain CJF12_RS06325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF12_RS06325 SM00387 Histidine kinase-like ATPases CJF12_RS06325 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS06325 SM00448 cheY-homologous receiver domain CJF12_RS06330 SM00387 Histidine kinase-like ATPases CJF12_RS06330 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS06330 SM00448 cheY-homologous receiver domain CJF12_RS06385 SM01276 CJF12_RS06385 CJF12_RS06400 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS06405 SM01321 CJF12_RS06405 CJF12_RS06500 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS06510 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS06525 SM00028 Tetratricopeptide repeats CJF12_RS06615 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS06640 SM00851 MGS-like domain CJF12_RS06640 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJF12_RS06650 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CJF12_RS06660 SM00344 helix_turn_helix ASNC type CJF12_RS06690 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJF12_RS06730 SM00387 Histidine kinase-like ATPases CJF12_RS06730 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS06735 SM00448 cheY-homologous receiver domain CJF12_RS06755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS06755 SM00954 Region found in RelA / SpoT proteins CJF12_RS06780 SM00028 Tetratricopeptide repeats CJF12_RS06785 SM00014 Acid phosphatase homologues CJF12_RS06820 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS06925 SM00487 DEAD-like helicases superfamily CJF12_RS06925 SM00490 helicase superfamily c-terminal domain CJF12_RS06970 SM01209 CJF12_RS06970 CJF12_RS06970 SM01210 CJF12_RS06970 CJF12_RS06975 SM00798 AICARFT/IMPCHase bienzyme CJF12_RS06975 SM00851 MGS-like domain CJF12_RS07015 SM00642 Alpha-amylase domain CJF12_RS07085 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS07105 SM00226 Low molecular weight phosphatase family CJF12_RS07110 SM00382 ATPases associated with a variety of cellular activities CJF12_RS07110 SM00760 Bacterial dnaA protein helix-turn-helix domain CJF12_RS07140 SM00382 ATPases associated with a variety of cellular activities CJF12_RS07145 SM01234 CJF12_RS07145 CJF12_RS07240 SM00322 K homology RNA-binding domain CJF12_RS07240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS07315 SM00046 Diacylglycerol kinase catalytic domain (presumed) CJF12_RS07340 SM00387 Histidine kinase-like ATPases CJF12_RS07340 SM00433 TopoisomeraseII CJF12_RS07480 SM00347 helix_turn_helix multiple antibiotic resistance protein CJF12_RS07510 SM00382 ATPases associated with a variety of cellular activities CJF12_RS07570 SM00318 Staphylococcal nuclease homologues CJF12_RS07575 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS07610 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CJF12_RS07625 SM00487 DEAD-like helicases superfamily CJF12_RS07625 SM00490 helicase superfamily c-terminal domain CJF12_RS07680 SM00882 Coenzyme A transferase CJF12_RS07685 SM00382 ATPases associated with a variety of cellular activities CJF12_RS07690 SM00882 Coenzyme A transferase CJF12_RS07720 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS07745 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS07750 SM00487 DEAD-like helicases superfamily CJF12_RS07750 SM00490 helicase superfamily c-terminal domain CJF12_RS07765 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS07770 SM00422 helix_turn_helix, mercury resistance CJF12_RS07785 SM00363 S4 RNA-binding domain CJF12_RS07810 SM00650 Ribosomal RNA adenine dimethylases CJF12_RS07820 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CJF12_RS07935 SM00060 Fibronectin type 3 domain CJF12_RS07940 SM00479 CJF12_RS07940 CJF12_RS07940 SM00481 DNA polymerase alpha chain like domain CJF12_RS07945 SM00861 Transketolase, pyrimidine binding domain CJF12_RS07955 SM00344 helix_turn_helix ASNC type CJF12_RS07970 SM00458 Ricin-type beta-trefoil CJF12_RS07985 SM00981 CJF12_RS07985 CJF12_RS08020 SM00946 Prolyl-tRNA synthetase, C-terminal CJF12_RS08040 SM00271 DnaJ molecular chaperone homology domain CJF12_RS08070 SM00937 CJF12_RS08070 CJF12_RS08080 SM00382 ATPases associated with a variety of cellular activities CJF12_RS08085 SM00382 ATPases associated with a variety of cellular activities CJF12_RS08120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJF12_RS08180 SM00400 zinc finger CJF12_RS08180 SM00493 CJF12_RS08180 CJF12_RS08190 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CJF12_RS08190 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CJF12_RS08205 SM00448 cheY-homologous receiver domain CJF12_RS08205 SM00850 LytTr DNA-binding domain CJF12_RS08245 SM00867 YceI-like domain CJF12_RS08250 SM00867 YceI-like domain CJF12_RS08280 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS08280 SM00322 K homology RNA-binding domain CJF12_RS08290 SM01387 CJF12_RS08290 CJF12_RS08300 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF12_RS08300 SM00924 MgtE intracellular N domain CJF12_RS08320 SM00849 Metallo-beta-lactamase superfamily CJF12_RS08335 SM00478 endonuclease III CJF12_RS08390 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS08420 SM00487 DEAD-like helicases superfamily CJF12_RS08425 SM00357 Cold shock protein domain CJF12_RS08430 SM00357 Cold shock protein domain CJF12_RS08465 SM00450 Rhodanese Homology Domain CJF12_RS08495 SM00478 endonuclease III CJF12_RS08495 SM00525 CJF12_RS08495 CJF12_RS08530 SM00636 CJF12_RS08530 CJF12_RS08535 SM00852 Probable molybdopterin binding domain CJF12_RS08545 SM00448 cheY-homologous receiver domain CJF12_RS08545 SM00850 LytTr DNA-binding domain CJF12_RS08550 SM00028 Tetratricopeptide repeats CJF12_RS08565 SM00327 von Willebrand factor (vWF) type A domain CJF12_RS08595 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS08605 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS08630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF12_RS08650 SM01235 CJF12_RS08650 CJF12_RS08695 SM00028 Tetratricopeptide repeats CJF12_RS08695 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS08725 SM00382 ATPases associated with a variety of cellular activities CJF12_RS08785 SM00823 Phosphopantetheine attachment site CJF12_RS08790 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CJF12_RS08795 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS08895 SM00470 ParB-like nuclease domain CJF12_RS08910 SM00788 Adenylosuccinate synthetase CJF12_RS08920 SM00382 ATPases associated with a variety of cellular activities CJF12_RS08945 SM00487 DEAD-like helicases superfamily CJF12_RS08945 SM00490 helicase superfamily c-terminal domain CJF12_RS08980 SM00487 DEAD-like helicases superfamily CJF12_RS08980 SM00490 helicase superfamily c-terminal domain CJF12_RS08995 SM00382 ATPases associated with a variety of cellular activities CJF12_RS09035 SM00644 CJF12_RS09035 CJF12_RS09105 SM00822 CJF12_RS09105 CJF12_RS09120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJF12_RS09120 SM00292 breast cancer carboxy-terminal domain CJF12_RS09120 SM00532 Ligase N family CJF12_RS09200 SM00382 ATPases associated with a variety of cellular activities CJF12_RS09200 SM00448 cheY-homologous receiver domain CJF12_RS09240 SM00091 PAS domain CJF12_RS09240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF12_RS09240 SM00387 Histidine kinase-like ATPases CJF12_RS09240 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS09295 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CJF12_RS09295 SM00474 3'-5' exonuclease CJF12_RS09295 SM00475 5'-3' exonuclease CJF12_RS09295 SM00482 DNA polymerase A domain CJF12_RS09305 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CJF12_RS09360 SM00382 ATPases associated with a variety of cellular activities CJF12_RS09360 SM01086 C-terminal, D2-small domain, of ClpB protein CJF12_RS09390 SM00421 helix_turn_helix, Lux Regulon CJF12_RS09395 SM00411 bacterial (prokaryotic) histone like domain CJF12_RS09400 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS09420 SM00563 Phosphate acyltransferases CJF12_RS09460 SM01126 CJF12_RS09460 CJF12_RS09605 SM00903 Flavin reductase like domain CJF12_RS09685 SM00493 CJF12_RS09685 CJF12_RS09725 SM00867 YceI-like domain CJF12_RS09730 SM00382 ATPases associated with a variety of cellular activities CJF12_RS09745 SM01290 CJF12_RS09745 CJF12_RS09815 SM00861 Transketolase, pyrimidine binding domain CJF12_RS09840 SM00344 helix_turn_helix ASNC type CJF12_RS09880 SM00870 CJF12_RS09880 CJF12_RS09930 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS10035 SM00363 S4 RNA-binding domain CJF12_RS10050 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS10115 SM00487 DEAD-like helicases superfamily CJF12_RS10115 SM00490 helicase superfamily c-terminal domain CJF12_RS10120 SM00448 cheY-homologous receiver domain CJF12_RS10125 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS10135 SM01130 CJF12_RS10135 CJF12_RS10255 SM00849 Metallo-beta-lactamase superfamily CJF12_RS10335 SM00244 prohibitin homologues CJF12_RS10380 SM00382 ATPases associated with a variety of cellular activities CJF12_RS10460 SM00752 Horizontally Transferred TransMembrane Domain CJF12_RS10490 SM00382 ATPases associated with a variety of cellular activities CJF12_RS10530 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS10605 SM00060 Fibronectin type 3 domain CJF12_RS10665 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJF12_RS10675 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJF12_RS10755 SM00732 Likely ribonuclease with RNase H fold. CJF12_RS10760 SM00855 Phosphoglycerate mutase family CJF12_RS10805 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS10815 SM00363 S4 RNA-binding domain CJF12_RS10820 SM00740 CJF12_RS10820 CJF12_RS10935 SM00867 YceI-like domain CJF12_RS10965 SM00465 GIY-YIG type nucleases (URI domain) CJF12_RS10985 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CJF12_RS11065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS11115 SM00382 ATPases associated with a variety of cellular activities CJF12_RS11135 SM00919 Malic enzyme, NAD binding domain CJF12_RS11135 SM01274 CJF12_RS11135 CJF12_RS11155 SM00563 Phosphate acyltransferases CJF12_RS11170 SM00756 CJF12_RS11170 CJF12_RS11175 SM00382 ATPases associated with a variety of cellular activities CJF12_RS11210 SM00382 ATPases associated with a variety of cellular activities CJF12_RS11210 SM00994 ClpX C4-type zinc finger CJF12_RS11210 SM01086 C-terminal, D2-small domain, of ClpB protein CJF12_RS11400 SM00382 ATPases associated with a variety of cellular activities CJF12_RS11400 SM01086 C-terminal, D2-small domain, of ClpB protein CJF12_RS11420 SM00387 Histidine kinase-like ATPases CJF12_RS11425 SM00421 helix_turn_helix, Lux Regulon CJF12_RS11425 SM00448 cheY-homologous receiver domain CJF12_RS11435 SM00014 Acid phosphatase homologues CJF12_RS11455 SM00387 Histidine kinase-like ATPases CJF12_RS11455 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS11460 SM00448 cheY-homologous receiver domain CJF12_RS11460 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS11490 SM00387 Histidine kinase-like ATPases CJF12_RS11490 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS11495 SM00448 cheY-homologous receiver domain CJF12_RS11495 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS11605 SM01126 CJF12_RS11605 CJF12_RS11660 SM01065 Starch binding domain CJF12_RS11670 SM00840 CJF12_RS11670 CJF12_RS11745 SM01018 B12 binding domain CJF12_RS11850 SM00382 ATPases associated with a variety of cellular activities CJF12_RS11920 SM01192 CJF12_RS11920 CJF12_RS11920 SM01193 CJF12_RS11920 CJF12_RS11940 SM00662 RNA polymerases D CJF12_RS11945 SM00363 S4 RNA-binding domain CJF12_RS11945 SM01390 CJF12_RS11945 CJF12_RS12020 SM01374 CJF12_RS12020 CJF12_RS12040 SM00322 K homology RNA-binding domain CJF12_RS12055 SM01382 CJF12_RS12055 CJF12_RS12055 SM01383 CJF12_RS12055 CJF12_RS12075 SM00420 helix_turn_helix, Deoxyribose operon repressor CJF12_RS12075 SM01134 CJF12_RS12075 CJF12_RS12140 SM01403 CJF12_RS12140 CJF12_RS12145 SM00838 Elongation factor G C-terminus CJF12_RS12145 SM00889 Elongation factor G, domain IV CJF12_RS12200 SM00387 Histidine kinase-like ATPases CJF12_RS12200 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS12205 SM00448 cheY-homologous receiver domain CJF12_RS12205 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS12240 SM00450 Rhodanese Homology Domain CJF12_RS12245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF12_RS12265 SM00646 CJF12_RS12265 CJF12_RS12300 SM00382 ATPases associated with a variety of cellular activities CJF12_RS12305 SM00671 Sel1-like repeats. CJF12_RS12310 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS12315 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJF12_RS12315 SM00895 CJF12_RS12315 CJF12_RS12495 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS12515 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJF12_RS12520 SM00257 Lysin motif CJF12_RS12575 SM00984 UDP binding domain CJF12_RS12595 SM00382 ATPases associated with a variety of cellular activities CJF12_RS12705 SM00947 Carbonic anhydrase CJF12_RS12720 SM00947 Carbonic anhydrase CJF12_RS12755 SM00487 DEAD-like helicases superfamily CJF12_RS12755 SM00490 helicase superfamily c-terminal domain CJF12_RS12755 SM00982 CJF12_RS12755 CJF12_RS12755 SM01058 CarD-like/TRCF domain CJF12_RS12850 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJF12_RS12930 SM00357 Cold shock protein domain CJF12_RS12930 SM00382 ATPases associated with a variety of cellular activities CJF12_RS12945 SM00382 ATPases associated with a variety of cellular activities CJF12_RS12980 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13045 SM00387 Histidine kinase-like ATPases CJF12_RS13045 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS13050 SM00448 cheY-homologous receiver domain CJF12_RS13050 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS13095 SM00812 Alpha-L-fucosidase CJF12_RS13105 SM01149 CJF12_RS13105 CJF12_RS13135 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS13140 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS13165 SM00825 Beta-ketoacyl synthase CJF12_RS13265 SM00387 Histidine kinase-like ATPases CJF12_RS13270 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13270 SM00448 cheY-homologous receiver domain CJF12_RS13285 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13340 SM01230 CJF12_RS13340 CJF12_RS13420 SM01400 CJF12_RS13420 CJF12_RS13550 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13575 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJF12_RS13650 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS13670 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13680 SM00344 helix_turn_helix ASNC type CJF12_RS13705 SM00829 Enoylreductase CJF12_RS13730 SM00450 Rhodanese Homology Domain CJF12_RS13810 SM00382 ATPases associated with a variety of cellular activities CJF12_RS13860 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CJF12_RS13860 SM00534 ATPase domain of DNA mismatch repair MUTS family CJF12_RS13960 SM00478 endonuclease III CJF12_RS14035 SM00382 ATPases associated with a variety of cellular activities CJF12_RS14035 SM01086 C-terminal, D2-small domain, of ClpB protein CJF12_RS14050 SM00448 cheY-homologous receiver domain CJF12_RS14050 SM00850 LytTr DNA-binding domain CJF12_RS14095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF12_RS14095 SM00245 tail specific protease CJF12_RS14125 SM01240 CJF12_RS14125 CJF12_RS14130 SM00822 CJF12_RS14130 CJF12_RS14155 SM01005 Alanine racemase, C-terminal domain CJF12_RS14170 SM01228 CJF12_RS14170 CJF12_RS14195 SM00316 Ribosomal protein S1-like RNA-binding domain CJF12_RS14195 SM00357 Cold shock protein domain CJF12_RS14195 SM00955 CJF12_RS14195 CJF12_RS14375 SM00899 CJF12_RS14375 CJF12_RS14400 SM00829 Enoylreductase CJF12_RS14405 SM00028 Tetratricopeptide repeats CJF12_RS14410 SM01126 CJF12_RS14410 CJF12_RS14495 SM00248 ankyrin repeats CJF12_RS14555 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS14560 SM00448 cheY-homologous receiver domain CJF12_RS14560 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS14565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF12_RS14565 SM00387 Histidine kinase-like ATPases CJF12_RS14565 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS14580 SM01340 CJF12_RS14580 CJF12_RS14620 SM01038 Beta galactosidase small chain CJF12_RS14640 SM00864 Tubulin/FtsZ family, GTPase domain CJF12_RS14640 SM00865 Tubulin/FtsZ family, C-terminal domain CJF12_RS14645 SM00842 Cell division protein FtsA CJF12_RS14690 SM00740 CJF12_RS14690 CJF12_RS14730 SM00060 Fibronectin type 3 domain CJF12_RS14765 SM00957 SecA DEAD-like domain CJF12_RS14765 SM00958 SecA preprotein cross-linking domain CJF12_RS14855 SM00487 DEAD-like helicases superfamily CJF12_RS14855 SM00490 helicase superfamily c-terminal domain CJF12_RS14930 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJF12_RS14930 SM00245 tail specific protease CJF12_RS14960 SM00450 Rhodanese Homology Domain CJF12_RS14965 SM00450 Rhodanese Homology Domain CJF12_RS14965 SM00849 Metallo-beta-lactamase superfamily CJF12_RS14985 SM00479 CJF12_RS14985 CJF12_RS15005 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS15015 SM00028 Tetratricopeptide repeats CJF12_RS15020 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15070 SM01409 CJF12_RS15070 CJF12_RS15095 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15135 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS15145 SM00642 Alpha-amylase domain CJF12_RS15190 SM00937 CJF12_RS15190 CJF12_RS15265 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15295 SM00710 Parallel beta-helix repeats CJF12_RS15320 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15320 SM00464 Found in ATP-dependent protease La (LON) CJF12_RS15420 SM00100 Cyclic nucleotide-monophosphate binding domain CJF12_RS15420 SM00419 helix_turn_helix, cAMP Regulatory protein CJF12_RS15465 SM00876 Biotin and Thiamin Synthesis associated domain CJF12_RS15540 SM01235 CJF12_RS15540 CJF12_RS15565 SM01060 CJF12_RS15565 CJF12_RS15605 SM00448 cheY-homologous receiver domain CJF12_RS15605 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS15610 SM00387 Histidine kinase-like ATPases CJF12_RS15610 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS15680 SM00822 CJF12_RS15680 CJF12_RS15685 SM00825 Beta-ketoacyl synthase CJF12_RS15720 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS15760 SM01260 CJF12_RS15760 CJF12_RS15765 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15805 SM00825 Beta-ketoacyl synthase CJF12_RS15820 SM00825 Beta-ketoacyl synthase CJF12_RS15835 SM00382 ATPases associated with a variety of cellular activities CJF12_RS15870 SM00563 Phosphate acyltransferases CJF12_RS15890 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJF12_RS15890 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJF12_RS15890 SM00493 CJF12_RS15890 CJF12_RS15935 SM00935 Outer membrane protein (OmpH-like) CJF12_RS15940 SM00935 Outer membrane protein (OmpH-like) CJF12_RS16115 SM00098 Alkaline phosphatase homologues CJF12_RS16120 SM00148 Phospholipase C, catalytic domain (part); domain X CJF12_RS16175 SM00116 Domain in cystathionine beta-synthase and other proteins. CJF12_RS16175 SM01240 CJF12_RS16175 CJF12_RS16400 SM00878 Biotin carboxylase C-terminal domain CJF12_RS16430 SM00387 Histidine kinase-like ATPases CJF12_RS16430 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS16440 SM00382 ATPases associated with a variety of cellular activities CJF12_RS16460 SM00155 Phospholipase D. Active site motifs. CJF12_RS16490 SM00977 TilS substrate C-terminal domain CJF12_RS16575 SM00028 Tetratricopeptide repeats CJF12_RS16590 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. CJF12_RS16595 SM00382 ATPases associated with a variety of cellular activities CJF12_RS16610 SM01323 CJF12_RS16610 CJF12_RS16635 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CJF12_RS16645 SM00788 Adenylosuccinate synthetase CJF12_RS16725 SM00060 Fibronectin type 3 domain CJF12_RS16740 SM00060 Fibronectin type 3 domain CJF12_RS16750 SM00849 Metallo-beta-lactamase superfamily CJF12_RS16760 SM00382 ATPases associated with a variety of cellular activities CJF12_RS16795 SM00358 Double-stranded RNA binding motif CJF12_RS16795 SM00535 Ribonuclease III family CJF12_RS16800 SM00825 Beta-ketoacyl synthase CJF12_RS16810 SM00382 ATPases associated with a variety of cellular activities CJF12_RS16815 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS16865 SM00245 tail specific protease CJF12_RS16885 SM00382 ATPases associated with a variety of cellular activities CJF12_RS16925 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS16990 SM00448 cheY-homologous receiver domain CJF12_RS16990 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS16995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJF12_RS16995 SM00387 Histidine kinase-like ATPases CJF12_RS16995 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS17030 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CJF12_RS17030 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJF12_RS17050 SM00649 Ribosomal protein L11/L12 CJF12_RS17090 SM00663 RNA polymerase I subunit A N-terminus CJF12_RS17125 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS17125 SM00871 Bacterial transcription activator, effector binding domain CJF12_RS17130 SM00829 Enoylreductase CJF12_RS17140 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS17150 SM00642 Alpha-amylase domain CJF12_RS17190 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17240 SM00387 Histidine kinase-like ATPases CJF12_RS17240 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS17245 SM00448 cheY-homologous receiver domain CJF12_RS17245 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS17300 SM00612 CJF12_RS17300 CJF12_RS17325 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS17330 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS17345 SM00883 Chaperonin 10 Kd subunit CJF12_RS17370 SM00448 cheY-homologous receiver domain CJF12_RS17370 SM00850 LytTr DNA-binding domain CJF12_RS17430 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17440 SM00867 YceI-like domain CJF12_RS17490 SM00836 DALR anticodon binding domain CJF12_RS17490 SM01016 Arginyl tRNA synthetase N terminal dom CJF12_RS17520 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS17530 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS17530 SM00871 Bacterial transcription activator, effector binding domain CJF12_RS17575 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS17595 SM00387 Histidine kinase-like ATPases CJF12_RS17600 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17610 SM00421 helix_turn_helix, Lux Regulon CJF12_RS17615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJF12_RS17665 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17700 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17710 SM00641 Glycosyl hydrolases family 25 CJF12_RS17730 SM00344 helix_turn_helix ASNC type CJF12_RS17735 SM01133 CJF12_RS17735 CJF12_RS17795 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CJF12_RS17830 SM00060 Fibronectin type 3 domain CJF12_RS17890 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17905 SM00382 ATPases associated with a variety of cellular activities CJF12_RS17930 SM00905 Dihydroneopterin aldolase CJF12_RS17965 SM00072 Guanylate kinase homologues. CJF12_RS18005 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS18025 SM00849 Metallo-beta-lactamase superfamily CJF12_RS18050 SM00932 Scaffold protein Nfu/NifU N terminal CJF12_RS18065 SM00382 ATPases associated with a variety of cellular activities CJF12_RS18070 SM00235 Zinc-dependent metalloprotease CJF12_RS18090 SM00487 DEAD-like helicases superfamily CJF12_RS18090 SM00490 helicase superfamily c-terminal domain CJF12_RS18125 SM00382 ATPases associated with a variety of cellular activities CJF12_RS18125 SM00962 SRP54-type protein, GTPase domain CJF12_RS18125 SM00963 SRP54-type protein, helical bundle domain CJF12_RS18220 SM00642 Alpha-amylase domain CJF12_RS18230 SM01235 CJF12_RS18230 CJF12_RS18245 SM00245 tail specific protease CJF12_RS18290 SM00530 Helix-turn-helix XRE-family like proteins CJF12_RS18305 SM00935 Outer membrane protein (OmpH-like) CJF12_RS18365 SM00421 helix_turn_helix, Lux Regulon CJF12_RS18365 SM00448 cheY-homologous receiver domain CJF12_RS18375 SM00382 ATPases associated with a variety of cellular activities CJF12_RS18435 SM00479 CJF12_RS18435 CJF12_RS18470 SM00861 Transketolase, pyrimidine binding domain CJF12_RS18520 SM00411 bacterial (prokaryotic) histone like domain CJF12_RS18540 SM00363 S4 RNA-binding domain CJF12_RS18545 SM00829 Enoylreductase CJF12_RS18585 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS18595 SM00028 Tetratricopeptide repeats CJF12_RS18615 SM00812 Alpha-L-fucosidase CJF12_RS18720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS18780 SM00382 ATPases associated with a variety of cellular activities CJF12_RS18840 SM00984 UDP binding domain CJF12_RS18885 SM00710 Parallel beta-helix repeats CJF12_RS18945 SM00710 Parallel beta-helix repeats CJF12_RS18970 SM00729 Elongator protein 3, MiaB family, Radical SAM CJF12_RS19000 SM00448 cheY-homologous receiver domain CJF12_RS19005 SM00245 tail specific protease CJF12_RS19010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS19030 SM00841 Elongation factor P, C-terminal CJF12_RS19030 SM01185 CJF12_RS19030 CJF12_RS19045 SM00881 CoA binding domain CJF12_RS19060 SM00382 ATPases associated with a variety of cellular activities CJF12_RS19070 SM01004 Delta-aminolevulinic acid dehydratase CJF12_RS19090 SM00382 ATPases associated with a variety of cellular activities CJF12_RS19120 SM00382 ATPases associated with a variety of cellular activities CJF12_RS19150 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CJF12_RS19175 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS19185 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CJF12_RS19240 SM00421 helix_turn_helix, Lux Regulon CJF12_RS19240 SM00448 cheY-homologous receiver domain CJF12_RS19300 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS19305 SM01276 CJF12_RS19305 CJF12_RS19360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CJF12_RS19360 SM00387 Histidine kinase-like ATPases CJF12_RS19360 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS19480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJF12_RS19525 SM00060 Fibronectin type 3 domain CJF12_RS19550 SM00047 Lysozyme subfamily 2 CJF12_RS19565 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS19590 SM00448 cheY-homologous receiver domain CJF12_RS19590 SM00862 Transcriptional regulatory protein, C terminal CJF12_RS19595 SM00387 Histidine kinase-like ATPases CJF12_RS19595 SM00388 His Kinase A (phosphoacceptor) domain CJF12_RS19605 SM00642 Alpha-amylase domain CJF12_RS19655 SM00342 helix_turn_helix, arabinose operon control protein CJF12_RS19675 SM00271 DnaJ molecular chaperone homology domain CJF12_RS19720 SM00382 ATPases associated with a variety of cellular activities CJF12_RS19735 SM00421 helix_turn_helix, Lux Regulon CJF12_RS19755 SM00382 ATPases associated with a variety of cellular activities