locus-tag	class	description
ATE47_RS00050	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ATE47_RS00075	COG0322	excinuclease ABC activity
ATE47_RS00085	COG2986	histidine ammonia-lyase
ATE47_RS00095	COG1404	Belongs to the peptidase S8 family
ATE47_RS00105	COG3384	dioxygenase
ATE47_RS00110	COG2353	YceI-like domain
ATE47_RS00115	COG1506	peptidase
ATE47_RS00115	COG0823	Involved in the tonB-independent uptake of proteins
ATE47_RS00120	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ATE47_RS00120	COG2755	lipolytic protein G-D-S-L family
ATE47_RS00130	COG4628	conserved protein (DUF2132)
ATE47_RS00135	COG1047	Peptidyl-prolyl cis-trans
ATE47_RS00140	COG3012	SEC-C Motif Domain Protein
ATE47_RS00145	COG0339	signal peptide processing
ATE47_RS00180	COG1704	LemA family
ATE47_RS00185	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ATE47_RS00200	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ATE47_RS00205	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATE47_RS00210	COG2815	serine threonine protein kinase
ATE47_RS00210	COG0515	serine threonine protein kinase
ATE47_RS00215	COG0564	pseudouridine synthase activity
ATE47_RS00225	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ATE47_RS00230	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ATE47_RS00235	COG0778	Nitroreductase
ATE47_RS00240	COG1733	regulation of RNA biosynthetic process
ATE47_RS00265	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ATE47_RS00275	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ATE47_RS00280	COG0242	peptide deformylase activity
ATE47_RS00290	COG3956	TIGRFAM MazG family protein
ATE47_RS00315	COG1007	ATP synthesis coupled electron transport
ATE47_RS00320	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATE47_RS00325	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ATE47_RS00335	COG0839	Belongs to the complex I subunit 6 family
ATE47_RS00340	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATE47_RS00345	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ATE47_RS00350	COG1034	ATP synthesis coupled electron transport
ATE47_RS00360	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ATE47_RS00365	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ATE47_RS00370	COG0649	NAD binding
ATE47_RS00375	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATE47_RS00380	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATE47_RS00385	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ATE47_RS00405	COG1739	Uncharacterized protein family UPF0029
ATE47_RS00410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATE47_RS00410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ATE47_RS00420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ATE47_RS00435	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ATE47_RS00440	COG0346	lactoylglutathione lyase activity
ATE47_RS00515	COG0582	viral genome integration into host DNA
ATE47_RS00520	COG0024	Methionine aminopeptidase
ATE47_RS00555	COG2197	response regulator
ATE47_RS00570	COG0813	purine-nucleoside phosphorylase activity
ATE47_RS00585	COG0714	Associated with various cellular activities
ATE47_RS00685	COG0659	secondary active sulfate transmembrane transporter activity
ATE47_RS00690	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ATE47_RS00710	COG2310	stress, protein
ATE47_RS00715	COG3853	Toxic anion resistance protein (TelA)
ATE47_RS00745	COG1959	2 iron, 2 sulfur cluster binding
ATE47_RS00750	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ATE47_RS00760	COG0739	heme binding
ATE47_RS00765	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ATE47_RS00770	COG0579	oxidoreductase
ATE47_RS00815	COG0737	Belongs to the 5'-nucleotidase family
ATE47_RS00825	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ATE47_RS00845	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ATE47_RS00850	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATE47_RS00855	COG3104	oligopeptide transport
ATE47_RS00860	COG3104	oligopeptide transport
ATE47_RS00865	COG3104	oligopeptide transport
ATE47_RS00870	COG1506	peptidase
ATE47_RS00870	COG0823	Involved in the tonB-independent uptake of proteins
ATE47_RS00905	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ATE47_RS00910	COG0069	glutamate synthase activity
ATE47_RS00920	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ATE47_RS00925	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ATE47_RS00945	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ATE47_RS00950	COG0297	glycogen (starch) synthase activity
ATE47_RS00960	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ATE47_RS00965	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ATE47_RS01040	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATE47_RS01090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ATE47_RS01105	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATE47_RS01305	COG1506	peptidase
ATE47_RS01305	COG4946	Tricorn protease homolog
ATE47_RS01305	COG0823	Involved in the tonB-independent uptake of proteins
ATE47_RS01315	COG4771	TonB-dependent receptor
ATE47_RS01335	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ATE47_RS01390	COG1629	transport
ATE47_RS01395	COG0702	epimerase
ATE47_RS01495	COG0629	single-stranded DNA binding
ATE47_RS01550	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATE47_RS01595	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
ATE47_RS01670	COG0252	asparaginase activity
ATE47_RS01690	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ATE47_RS01700	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ATE47_RS01710	COG1522	sequence-specific DNA binding
ATE47_RS01745	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ATE47_RS01765	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATE47_RS01795	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATE47_RS01800	COG1741	Belongs to the pirin family
ATE47_RS01815	COG0477	Major facilitator Superfamily
ATE47_RS01825	COG0367	asparagine synthase
ATE47_RS01835	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ATE47_RS01835	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATE47_RS01840	COG2824	Alkylphosphonate utilization operon protein PhnA
ATE47_RS01855	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ATE47_RS01865	COG0492	ferredoxin-NADP+ reductase activity
ATE47_RS01880	COG1611	Belongs to the LOG family
ATE47_RS01885	COG2195	Cleaves the N-terminal amino acid of tripeptides
ATE47_RS01900	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ATE47_RS01905	COG1216	Glycosyl transferase, family 2
ATE47_RS01920	COG0612	Peptidase, M16
ATE47_RS01925	COG0612	Peptidase, M16
ATE47_RS01940	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ATE47_RS01980	COG3185	4-Hydroxyphenylpyruvate dioxygenase
ATE47_RS01990	COG0427	acetyl-CoA hydrolase
ATE47_RS01995	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ATE47_RS02000	COG4771	TonB-dependent receptor
ATE47_RS02025	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATE47_RS02045	COG2249	NAD(P)H dehydrogenase (quinone) activity
ATE47_RS02050	COG0583	DNA-binding transcription factor activity
ATE47_RS02055	COG0656	L-ascorbic acid biosynthetic process
ATE47_RS02065	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATE47_RS02235	COG2197	response regulator
ATE47_RS02250	COG1530	ribonuclease E activity
ATE47_RS02255	COG0776	regulation of translation
ATE47_RS02260	COG2197	response regulator
ATE47_RS02290	COG3179	chitinase
ATE47_RS02315	COG0542	response to heat
ATE47_RS02325	COG3501	Rhs element vgr protein
ATE47_RS02340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS02350	COG3501	Rhs element vgr protein
ATE47_RS02360	COG3209	COG3209 Rhs family protein
ATE47_RS02380	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATE47_RS02380	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ATE47_RS02405	COG0612	Peptidase, M16
ATE47_RS02410	COG4717	serine-type aminopeptidase activity
ATE47_RS02415	COG3015	lipoprotein NlpE involved in copper resistance
ATE47_RS02420	COG1285	pathogenesis
ATE47_RS02425	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ATE47_RS02440	COG4771	TonB-dependent receptor
ATE47_RS02455	COG0300	oxidoreductase activity
ATE47_RS02460	COG2264	protein methyltransferase activity
ATE47_RS02515	COG3023	N-Acetylmuramoyl-L-alanine amidase
ATE47_RS02520	COG1027	Aspartate ammonia-lyase
ATE47_RS02560	COG0306	phosphate transporter
ATE47_RS02580	COG0084	hydrolase, TatD family'
ATE47_RS02590	COG0513	Belongs to the DEAD box helicase family
ATE47_RS02600	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ATE47_RS02605	COG0563	adenylate kinase activity
ATE47_RS02610	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ATE47_RS02620	COG0488	(ABC) transporter
ATE47_RS02640	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ATE47_RS02665	COG1192	Involved in chromosome partitioning
ATE47_RS02670	COG1475	DNA binding
ATE47_RS02680	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ATE47_RS02685	COG0681	Belongs to the peptidase S26 family
ATE47_RS02710	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ATE47_RS02715	COG0277	FAD linked oxidase domain protein
ATE47_RS02735	COG1104	cysteine desulfurase activity
ATE47_RS02755	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS02800	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ATE47_RS02815	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ATE47_RS02820	COG2814	Major facilitator Superfamily
ATE47_RS02830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATE47_RS02830	COG0723	plastoquinol--plastocyanin reductase activity
ATE47_RS02845	COG1546	Belongs to the CinA family
ATE47_RS02845	COG1058	Belongs to the CinA family
ATE47_RS02850	COG3590	peptidase
ATE47_RS02855	COG3590	peptidase
ATE47_RS02885	COG0351	phosphomethylpyrimidine kinase
ATE47_RS02890	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ATE47_RS02910	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ATE47_RS02970	COG4771	TonB-dependent receptor
ATE47_RS02975	COG0702	epimerase
ATE47_RS02995	COG1595	DNA-templated transcription, initiation
ATE47_RS03045	COG3279	Response regulator of the LytR AlgR family
ATE47_RS03050	COG2201	protein-glutamate methylesterase activity
ATE47_RS03070	COG2194	sulfuric ester hydrolase activity
ATE47_RS03095	COG2197	response regulator
ATE47_RS03100	COG0642	Histidine kinase
ATE47_RS03130	COG1733	regulation of RNA biosynthetic process
ATE47_RS03135	COG1733	regulation of RNA biosynthetic process
ATE47_RS03140	COG1902	pentaerythritol trinitrate reductase activity
ATE47_RS03155	COG0077	Prephenate dehydratase
ATE47_RS03170	COG2115	Belongs to the xylose isomerase family
ATE47_RS03175	COG1629	transport
ATE47_RS03185	COG1312	Catalyzes the dehydration of D-mannonate
ATE47_RS03190	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS03195	COG2271	Major facilitator Superfamily
ATE47_RS03205	COG3507	Belongs to the glycosyl hydrolase 43 family
ATE47_RS03210	COG3507	Belongs to the glycosyl hydrolase 43 family
ATE47_RS03210	COG3693	PFAM glycoside hydrolase, family 10
ATE47_RS03210	COG2382	esterase
ATE47_RS03215	COG1501	Belongs to the glycosyl hydrolase 31 family
ATE47_RS03220	COG3507	Belongs to the glycosyl hydrolase 43 family
ATE47_RS03225	COG3507	Belongs to the glycosyl hydrolase 43 family
ATE47_RS03230	COG4948	Mandelate Racemase Muconate Lactonizing
ATE47_RS03245	COG1472	Belongs to the glycosyl hydrolase 3 family
ATE47_RS03255	COG1069	ribulokinase activity
ATE47_RS03265	COG2160	L-arabinose isomerase activity
ATE47_RS03305	COG2211	Major facilitator Superfamily
ATE47_RS03320	COG3661	Belongs to the glycosyl hydrolase 67 family
ATE47_RS03325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATE47_RS03330	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ATE47_RS03335	COG1085	galactose-1-phosphate uridylyltransferase
ATE47_RS03340	COG0561	phosphatase activity
ATE47_RS03485	COG2205	protein histidine kinase activity
ATE47_RS03485	COG0784	Response regulator, receiver
ATE47_RS03495	COG0783	Belongs to the Dps family
ATE47_RS03505	COG2249	NAD(P)H dehydrogenase (quinone) activity
ATE47_RS03510	COG1733	regulation of RNA biosynthetic process
ATE47_RS03520	COG4221	oxidoreductase activity
ATE47_RS03540	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ATE47_RS03545	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ATE47_RS03560	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ATE47_RS03560	COG0321	lipoyl(octanoyl) transferase activity
ATE47_RS03580	COG2239	Acts as a magnesium transporter
ATE47_RS03590	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ATE47_RS03595	COG1185	polyribonucleotide nucleotidyltransferase activity
ATE47_RS03635	COG3541	Predicted nucleotidyltransferase
ATE47_RS03680	COG0837	glucose binding
ATE47_RS03715	COG1760	l-serine dehydratase
ATE47_RS03720	COG0287	Prephenate dehydrogenase
ATE47_RS03725	COG0475	glutathione-regulated potassium exporter activity
ATE47_RS03730	COG3279	Response regulator of the LytR AlgR family
ATE47_RS03750	COG0802	atpase or kinase
ATE47_RS03760	COG0358	DNA primase activity
ATE47_RS03775	COG0693	protein deglycase activity
ATE47_RS03790	COG0149	triose-phosphate isomerase activity
ATE47_RS03830	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ATE47_RS03835	COG1595	DNA-templated transcription, initiation
ATE47_RS03845	COG3059	membrane
ATE47_RS03865	COG1131	(ABC) transporter
ATE47_RS03870	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ATE47_RS03875	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATE47_RS03880	COG0586	Pfam SNARE associated Golgi protein
ATE47_RS03890	COG2354	Protein conserved in bacteria
ATE47_RS03895	COG0484	heat shock protein binding
ATE47_RS03900	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ATE47_RS03905	COG1914	H( )-stimulated, divalent metal cation uptake system
ATE47_RS03915	COG0442	prolyl-tRNA aminoacylation
ATE47_RS04260	COG0116	Belongs to the methyltransferase superfamily
ATE47_RS04265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS04270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS04275	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS04280	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS04335	COG0626	cystathionine gamma-synthase activity
ATE47_RS04340	COG1522	sequence-specific DNA binding
ATE47_RS04345	COG3781	membrane
ATE47_RS04350	COG0022	dehydrogenase e1 component
ATE47_RS04360	COG0587	DNA-directed DNA polymerase activity
ATE47_RS04380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS04390	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ATE47_RS04400	COG1022	Amp-dependent synthetase and ligase
ATE47_RS04405	COG1960	acyl-CoA dehydrogenase activity
ATE47_RS04435	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ATE47_RS04440	COG1234	tRNA 3'-trailer cleavage
ATE47_RS04470	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ATE47_RS04475	COG2177	Part of the ABC transporter FtsEX involved in
ATE47_RS04485	COG1968	undecaprenyl-diphosphatase activity
ATE47_RS04490	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ATE47_RS04495	COG1187	pseudouridine synthase activity
ATE47_RS04520	COG2183	response to ionizing radiation
ATE47_RS04520	COG0539	negative regulation of cytoplasmic translation
ATE47_RS04535	COG2267	carboxylic ester hydrolase activity
ATE47_RS04540	COG0335	large ribosomal subunit rRNA binding
ATE47_RS04560	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ATE47_RS04565	COG1132	(ABC) transporter
ATE47_RS04580	COG3525	Glycosyl hydrolase, family 20, catalytic domain
ATE47_RS04585	COG1446	asparaginase
ATE47_RS04605	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ATE47_RS04625	COG1981	membrane
ATE47_RS04645	COG4977	sequence-specific DNA binding
ATE47_RS04645	COG1917	Cupin 2, conserved barrel domain protein
ATE47_RS04650	COG0300	oxidoreductase activity
ATE47_RS04675	COG1959	2 iron, 2 sulfur cluster binding
ATE47_RS04705	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ATE47_RS04710	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ATE47_RS04715	COG2226	methyltransferase
ATE47_RS04720	COG3720	iron ion transport
ATE47_RS04730	COG0242	peptide deformylase activity
ATE47_RS04735	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS04740	COG0321	lipoyl(octanoyl) transferase activity
ATE47_RS04745	COG0159	tryptophan synthase activity
ATE47_RS04750	COG0133	tryptophan synthase activity
ATE47_RS04760	COG0135	phosphoribosylanthranilate isomerase activity
ATE47_RS04765	COG0134	indole-3-glycerol-phosphate synthase activity
ATE47_RS04770	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ATE47_RS04775	COG0512	Glutamine amidotransferase of anthranilate synthase
ATE47_RS04780	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ATE47_RS04800	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
ATE47_RS04805	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ATE47_RS04815	COG1271	oxidase subunit
ATE47_RS04820	COG0187	DNA topoisomerase II activity
ATE47_RS04850	COG1301	dicarboxylic acid transport
ATE47_RS04855	COG0405	Gamma-glutamyltransferase
ATE47_RS04865	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATE47_RS04880	COG1408	metallophosphoesterase
ATE47_RS04885	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATE47_RS04895	COG2226	methyltransferase
ATE47_RS04915	COG1418	mRNA catabolic process
ATE47_RS04940	COG0477	Major facilitator Superfamily
ATE47_RS04950	COG0038	chloride channel
ATE47_RS04955	COG1082	Xylose isomerase domain protein TIM barrel
ATE47_RS04960	COG1607	acyl-coa hydrolase
ATE47_RS04970	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ATE47_RS04980	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
ATE47_RS04995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATE47_RS05000	COG1970	mechanosensitive ion channel activity
ATE47_RS05005	COG1970	mechanosensitive ion channel activity
ATE47_RS05010	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ATE47_RS05010	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ATE47_RS05015	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ATE47_RS05020	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ATE47_RS05025	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ATE47_RS05050	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ATE47_RS05055	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATE47_RS05060	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ATE47_RS05105	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATE47_RS05105	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATE47_RS05110	COG4206	TonB-dependent receptor
ATE47_RS05110	COG1629	transport
ATE47_RS05115	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ATE47_RS05125	COG1082	Xylose isomerase domain protein TIM barrel
ATE47_RS05130	COG0366	Alpha amylase catalytic
ATE47_RS05150	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ATE47_RS05155	COG1733	regulation of RNA biosynthetic process
ATE47_RS05160	COG1741	Belongs to the pirin family
ATE47_RS05175	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ATE47_RS05190	COG0151	Belongs to the GarS family
ATE47_RS05195	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ATE47_RS05195	COG0519	Catalyzes the synthesis of GMP from XMP
ATE47_RS05200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ATE47_RS05200	COG3153	acetyltransferase
ATE47_RS05210	COG0513	Belongs to the DEAD box helicase family
ATE47_RS05225	COG1979	alcohol dehydrogenase
ATE47_RS05245	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ATE47_RS05270	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ATE47_RS05285	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ATE47_RS05290	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ATE47_RS05305	COG0531	amino acid
ATE47_RS05315	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ATE47_RS05325	COG2133	pyrroloquinoline quinone binding
ATE47_RS05330	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATE47_RS05330	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ATE47_RS05340	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATE47_RS05345	COG0671	phosphoesterase, PA-phosphatase related
ATE47_RS05355	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ATE47_RS05360	COG1295	ribonuclease BN
ATE47_RS05365	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ATE47_RS05370	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ATE47_RS05385	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ATE47_RS05390	COG1522	sequence-specific DNA binding
ATE47_RS05395	COG0540	Belongs to the ATCase OTCase family
ATE47_RS05460	COG1011	Hydrolase
ATE47_RS05475	COG0492	ferredoxin-NADP+ reductase activity
ATE47_RS05555	COG0489	protein tyrosine kinase activity
ATE47_RS05555	COG3206	protein involved in exopolysaccharide biosynthesis
ATE47_RS05560	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATE47_RS05565	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATE47_RS05595	COG0438	transferase activity, transferring glycosyl groups
ATE47_RS05615	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ATE47_RS05625	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ATE47_RS05630	COG2205	protein histidine kinase activity
ATE47_RS05630	COG3437	response regulator, receiver
ATE47_RS05630	COG3850	Histidine kinase
ATE47_RS05630	COG4999	Histidine kinase
ATE47_RS05705	COG2197	response regulator
ATE47_RS05725	COG2094	Belongs to the DNA glycosylase MPG family
ATE47_RS05740	COG4221	oxidoreductase activity
ATE47_RS05765	COG4677	pectinesterase activity
ATE47_RS05780	COG2755	lipolytic protein G-D-S-L family
ATE47_RS05780	COG0657	acetylesterase activity
ATE47_RS05790	COG2755	lipolytic protein G-D-S-L family
ATE47_RS05810	COG2755	lipolytic protein G-D-S-L family
ATE47_RS05820	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ATE47_RS05835	COG4677	pectinesterase activity
ATE47_RS05840	COG0702	epimerase
ATE47_RS05845	COG1629	transport
ATE47_RS05850	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ATE47_RS05855	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS05860	COG1904	glucuronate isomerase
ATE47_RS05865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATE47_RS05870	COG0800	Aldolase
ATE47_RS05875	COG2271	Major facilitator Superfamily
ATE47_RS05880	COG0246	Mannitol dehydrogenase
ATE47_RS05885	COG2721	sulfolactate sulfo-lyase activity
ATE47_RS05905	COG3250	beta-galactosidase activity
ATE47_RS05910	COG2755	lipolytic protein G-D-S-L family
ATE47_RS05920	COG3401	FG-GAP repeat protein
ATE47_RS05935	COG1629	transport
ATE47_RS05940	COG0702	epimerase
ATE47_RS05945	COG3347	Dehydrogenase
ATE47_RS05945	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS05950	COG4952	isomerase
ATE47_RS05955	COG1070	Carbohydrate kinase
ATE47_RS05960	COG1304	FMN binding
ATE47_RS05965	COG1725	Transcriptional regulator
ATE47_RS05995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ATE47_RS06020	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATE47_RS06070	COG1082	Xylose isomerase domain protein TIM barrel
ATE47_RS06105	COG3685	Protein conserved in bacteria
ATE47_RS06150	COG1058	Belongs to the CinA family
ATE47_RS06150	COG1546	Belongs to the CinA family
ATE47_RS06155	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS06175	COG0025	NhaP-type Na H and K H
ATE47_RS06200	COG2197	response regulator
ATE47_RS06205	COG0156	8-amino-7-oxononanoate synthase activity
ATE47_RS06215	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ATE47_RS06225	COG1605	Chorismate mutase
ATE47_RS06225	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
ATE47_RS06230	COG1162	GTPase activity
ATE47_RS06235	COG0105	UTP biosynthetic process
ATE47_RS06250	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ATE47_RS06255	COG1363	Peptidase, m42
ATE47_RS06265	COG1051	belongs to the nudix hydrolase family
ATE47_RS06270	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATE47_RS06270	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ATE47_RS06285	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ATE47_RS06330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATE47_RS06335	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ATE47_RS06340	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ATE47_RS06365	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATE47_RS06370	COG0450	alkyl hydroperoxide reductase
ATE47_RS06375	COG0612	Peptidase, M16
ATE47_RS06380	COG0436	Aminotransferase
ATE47_RS06385	COG0357	Ribosomal RNA small subunit methyltransferase G
ATE47_RS06410	COG1960	acyl-CoA dehydrogenase activity
ATE47_RS06425	COG4771	TonB-dependent receptor
ATE47_RS06445	COG1472	Belongs to the glycosyl hydrolase 3 family
ATE47_RS06460	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ATE47_RS06470	COG0519	Catalyzes the synthesis of GMP from XMP
ATE47_RS06480	COG0813	purine-nucleoside phosphorylase activity
ATE47_RS06505	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ATE47_RS06525	COG2226	methyltransferase
ATE47_RS06530	COG2076	Multidrug Resistance protein
ATE47_RS06550	COG0738	Major facilitator superfamily
ATE47_RS06565	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ATE47_RS06575	COG1506	peptidase
ATE47_RS06580	COG1247	-acetyltransferase
ATE47_RS06590	COG0534	Mate efflux family protein
ATE47_RS06600	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATE47_RS06610	COG1801	Protein of unknown function DUF72
ATE47_RS06615	COG2217	Heavy metal translocating P-type atpase
ATE47_RS06625	COG1607	acyl-coa hydrolase
ATE47_RS06630	COG0724	RNA recognition motif
ATE47_RS06665	COG1136	(ABC) transporter
ATE47_RS06680	COG2003	Belongs to the UPF0758 family
ATE47_RS06695	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ATE47_RS06700	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ATE47_RS06705	COG0436	Aminotransferase
ATE47_RS06710	COG2234	aminopeptidase activity
ATE47_RS06730	COG0300	oxidoreductase activity
ATE47_RS06755	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ATE47_RS06775	COG1960	acyl-CoA dehydrogenase activity
ATE47_RS06785	COG0183	Belongs to the thiolase family
ATE47_RS06795	COG1024	Enoyl-CoA hydratase
ATE47_RS06795	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATE47_RS06805	COG1120	ATPase activity
ATE47_RS06830	COG2949	membrane
ATE47_RS06840	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATE47_RS06870	COG0528	UMP kinase activity
ATE47_RS06875	COG0233	cytoplasmic translational termination
ATE47_RS06895	COG1674	ftsk spoiiie
ATE47_RS06900	COG1335	isochorismatase
ATE47_RS06910	COG1333	cytochrome c biogenesis protein
ATE47_RS06910	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ATE47_RS06930	COG1012	belongs to the aldehyde dehydrogenase family
ATE47_RS06990	COG1733	regulation of RNA biosynthetic process
ATE47_RS07005	COG0791	NLP P60 protein
ATE47_RS07010	COG2171	N-acyltransferase activity
ATE47_RS07020	COG0463	Glycosyl transferase, family 2
ATE47_RS07030	COG0438	transferase activity, transferring glycosyl groups
ATE47_RS07035	COG2234	aminopeptidase activity
ATE47_RS07040	COG2234	aminopeptidase activity
ATE47_RS07045	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ATE47_RS07050	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ATE47_RS07070	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ATE47_RS07075	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ATE47_RS07110	COG1960	acyl-CoA dehydrogenase activity
ATE47_RS07140	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ATE47_RS07170	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ATE47_RS07175	COG1187	pseudouridine synthase activity
ATE47_RS07180	COG1335	isochorismatase
ATE47_RS07185	COG2318	DinB family
ATE47_RS07195	COG3118	belongs to the thioredoxin family
ATE47_RS07205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATE47_RS07210	COG0697	spore germination
ATE47_RS07235	COG3685	Protein conserved in bacteria
ATE47_RS07245	COG0753	catalase activity
ATE47_RS07250	COG1063	alcohol dehydrogenase
ATE47_RS07260	COG0300	oxidoreductase activity
ATE47_RS07265	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS07270	COG0723	plastoquinol--plastocyanin reductase activity
ATE47_RS07270	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ATE47_RS07285	COG3871	stress protein (general stress protein 26)
ATE47_RS07295	COG2814	Major facilitator Superfamily
ATE47_RS07320	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ATE47_RS07340	COG1793	dna ligase
ATE47_RS07345	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ATE47_RS07345	COG1793	dna ligase
ATE47_RS07350	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ATE47_RS07360	COG0156	8-amino-7-oxononanoate synthase activity
ATE47_RS07365	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ATE47_RS07370	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ATE47_RS07375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ATE47_RS07380	COG2323	membrane
ATE47_RS07395	COG1252	NADH dehydrogenase
ATE47_RS07405	COG4221	oxidoreductase activity
ATE47_RS07420	COG0561	phosphatase activity
ATE47_RS07430	COG3685	Protein conserved in bacteria
ATE47_RS07490	COG0556	nucleotide-excision repair
ATE47_RS07530	COG0640	Transcriptional regulator
ATE47_RS07540	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
ATE47_RS07565	COG1321	iron dependent repressor
ATE47_RS07600	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ATE47_RS07615	COG2259	Doxx family
ATE47_RS07620	COG2132	Multicopper oxidase
ATE47_RS07640	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ATE47_RS07665	COG0156	8-amino-7-oxononanoate synthase activity
ATE47_RS07670	COG0697	spore germination
ATE47_RS07690	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ATE47_RS07695	COG0196	riboflavin kinase activity
ATE47_RS07710	COG0702	epimerase
ATE47_RS07715	COG0386	Belongs to the glutathione peroxidase family
ATE47_RS07725	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ATE47_RS07745	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATE47_RS07760	COG0463	Glycosyl transferase, family 2
ATE47_RS07775	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ATE47_RS07785	COG1575	Belongs to the MenA family. Type 1 subfamily
ATE47_RS07820	COG2323	membrane
ATE47_RS07875	COG0531	amino acid
ATE47_RS07920	COG2270	Major facilitator Superfamily
ATE47_RS07930	COG0183	Belongs to the thiolase family
ATE47_RS07960	COG2211	Major facilitator Superfamily
ATE47_RS07970	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ATE47_RS07980	COG0300	oxidoreductase activity
ATE47_RS08050	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS08050	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS08060	COG0572	uridine kinase
ATE47_RS08075	COG1253	flavin adenine dinucleotide binding
ATE47_RS08080	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ATE47_RS08085	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ATE47_RS08090	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ATE47_RS08095	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ATE47_RS08100	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ATE47_RS08105	COG0356	it plays a direct role in the translocation of protons across the membrane
ATE47_RS08115	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ATE47_RS08155	COG1702	phosphate starvation-inducible protein PhoH
ATE47_RS08165	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATE47_RS08175	COG0360	Binds together with S18 to 16S ribosomal RNA
ATE47_RS08180	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ATE47_RS08185	COG0359	binds to the 23S rRNA
ATE47_RS08210	COG2967	ApaG domain
ATE47_RS08215	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATE47_RS08230	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ATE47_RS08240	COG0297	glycogen (starch) synthase activity
ATE47_RS08245	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ATE47_RS08255	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ATE47_RS08260	COG1181	Belongs to the D-alanine--D-alanine ligase family
ATE47_RS08275	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ATE47_RS08300	COG4242	Belongs to the peptidase S51 family
ATE47_RS08305	COG1446	asparaginase
ATE47_RS08315	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ATE47_RS08330	COG0124	histidyl-tRNA synthetase
ATE47_RS08340	COG0629	single-stranded DNA binding
ATE47_RS08360	COG1090	epimerase
ATE47_RS08365	COG0494	nUDIX hydrolase
ATE47_RS08375	COG0484	heat shock protein binding
ATE47_RS08405	COG2996	Protein conserved in bacteria
ATE47_RS08430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATE47_RS08440	COG0438	transferase activity, transferring glycosyl groups
ATE47_RS08445	COG0514	ATP-dependent DNA helicase (RecQ)
ATE47_RS08450	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ATE47_RS08450	COG0517	IMP dehydrogenase activity
ATE47_RS08460	COG0805	protein transport
ATE47_RS08485	COG3852	Histidine kinase
ATE47_RS08490	COG2027	D-alanyl-D-alanine carboxypeptidase
ATE47_RS08495	COG3340	Belongs to the peptidase S51 family
ATE47_RS08510	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ATE47_RS08545	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ATE47_RS08575	COG0009	L-threonylcarbamoyladenylate synthase
ATE47_RS08580	COG3022	response to hydroperoxide
ATE47_RS08585	COG2890	protein-(glutamine-N5) methyltransferase activity
ATE47_RS08600	COG0300	oxidoreductase activity
ATE47_RS08645	COG0436	Aminotransferase
ATE47_RS08650	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS08660	COG0012	GTP binding
ATE47_RS08665	COG1528	Iron-storage protein
ATE47_RS08670	COG1649	PFAM Uncharacterised BCR, COG1649
ATE47_RS08695	COG2183	response to ionizing radiation
ATE47_RS08750	COG0531	amino acid
ATE47_RS08780	COG2353	YceI-like domain
ATE47_RS08790	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS08805	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ATE47_RS08840	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ATE47_RS08850	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ATE47_RS08850	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ATE47_RS08860	COG0484	heat shock protein binding
ATE47_RS08905	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS08930	COG0596	Alpha beta hydrolase
ATE47_RS08975	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ATE47_RS08985	COG1733	regulation of RNA biosynthetic process
ATE47_RS08990	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS09005	COG3275	phosphorelay sensor kinase activity
ATE47_RS09010	COG3279	Response regulator of the LytR AlgR family
ATE47_RS09025	COG2814	Major facilitator Superfamily
ATE47_RS09030	COG0667	Aldo Keto reductase
ATE47_RS09070	COG1012	belongs to the aldehyde dehydrogenase family
ATE47_RS09095	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATE47_RS09115	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ATE47_RS09130	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATE47_RS09145	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ATE47_RS09160	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ATE47_RS09175	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATE47_RS09200	COG0592	DNA-directed DNA polymerase activity
ATE47_RS09225	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ATE47_RS09265	COG0702	epimerase
ATE47_RS09270	COG1629	transport
ATE47_RS09285	COG1393	Belongs to the ArsC family
ATE47_RS09290	COG1428	Deoxynucleoside kinase
ATE47_RS09310	COG0025	NhaP-type Na H and K H
ATE47_RS09315	COG3781	membrane
ATE47_RS09370	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ATE47_RS09385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ATE47_RS09455	COG0076	glutamate decarboxylase activity
ATE47_RS09465	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ATE47_RS09475	COG5002	protein histidine kinase activity
ATE47_RS09480	COG2205	protein histidine kinase activity
ATE47_RS09490	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ATE47_RS09495	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ATE47_RS09500	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ATE47_RS09510	COG2204	response regulator
ATE47_RS09525	COG1131	(ABC) transporter
ATE47_RS09540	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATE47_RS09560	COG1090	epimerase
ATE47_RS09585	COG2205	protein histidine kinase activity
ATE47_RS09585	COG0745	RESPONSE REGULATOR receiver
ATE47_RS09585	COG3292	Two component regulator propeller
ATE47_RS09590	COG2204	response regulator
ATE47_RS09615	COG1902	pentaerythritol trinitrate reductase activity
ATE47_RS09620	COG1733	regulation of RNA biosynthetic process
ATE47_RS09630	COG0022	dehydrogenase e1 component
ATE47_RS09640	COG0142	geranyltranstransferase activity
ATE47_RS09655	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ATE47_RS09660	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ATE47_RS09680	COG0823	Involved in the tonB-independent uptake of proteins
ATE47_RS09680	COG1506	peptidase
ATE47_RS09685	COG1950	PFAM Membrane protein of
ATE47_RS09705	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ATE47_RS09710	COG2011	ABC-type metal ion transport system permease component
ATE47_RS09715	COG1464	Belongs to the NlpA lipoprotein family
ATE47_RS09720	COG1472	Belongs to the glycosyl hydrolase 3 family
ATE47_RS09745	COG1522	sequence-specific DNA binding
ATE47_RS09750	COG4106	trans-aconitate 2-methyltransferase activity
ATE47_RS09755	COG1278	Cold shock
ATE47_RS09760	COG0513	Belongs to the DEAD box helicase family
ATE47_RS09775	COG3708	Transcriptional regulator
ATE47_RS09775	COG2207	Transcriptional regulator
ATE47_RS09810	COG2972	Histidine kinase
ATE47_RS09815	COG3279	Response regulator of the LytR AlgR family
ATE47_RS09845	COG4221	oxidoreductase activity
ATE47_RS09890	COG4974	Belongs to the 'phage' integrase family
ATE47_RS09910	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ATE47_RS09915	COG0006	proline dipeptidase activity
ATE47_RS09935	COG1012	belongs to the aldehyde dehydrogenase family
ATE47_RS09970	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATE47_RS09975	COG0598	Magnesium transport protein CorA
ATE47_RS09985	COG0519	Catalyzes the synthesis of GMP from XMP
ATE47_RS10015	COG2814	Major facilitator Superfamily
ATE47_RS10030	COG1309	transcriptional regulator
ATE47_RS10075	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ATE47_RS10095	COG1289	transmembrane transporter activity
ATE47_RS10105	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ATE47_RS10115	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ATE47_RS10120	COG0697	spore germination
ATE47_RS10125	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ATE47_RS10135	COG0730	response to heat
ATE47_RS10145	COG0346	lactoylglutathione lyase activity
ATE47_RS10165	COG1022	Amp-dependent synthetase and ligase
ATE47_RS10170	COG1086	Polysaccharide biosynthesis protein
ATE47_RS10200	COG2267	carboxylic ester hydrolase activity
ATE47_RS10205	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ATE47_RS10210	COG4771	TonB-dependent receptor
ATE47_RS10220	COG0668	transmembrane transport
ATE47_RS10240	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ATE47_RS10250	COG1193	negative regulation of DNA recombination
ATE47_RS10270	COG1607	acyl-coa hydrolase
ATE47_RS10310	COG1169	isochorismate synthase
ATE47_RS10320	COG2095	MarC family integral membrane protein
ATE47_RS10340	COG2304	oxidoreductase activity
ATE47_RS10360	COG0714	Associated with various cellular activities
ATE47_RS10370	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATE47_RS10405	COG0492	ferredoxin-NADP+ reductase activity
ATE47_RS10420	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATE47_RS10430	COG4948	Mandelate Racemase Muconate Lactonizing
ATE47_RS10435	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ATE47_RS10440	COG0527	aspartate kinase activity
ATE47_RS10465	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS10475	COG3254	rhamnose metabolic process
ATE47_RS10480	COG0179	Fumarylacetoacetate (FAA) hydrolase
ATE47_RS10485	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS10490	COG2721	sulfolactate sulfo-lyase activity
ATE47_RS10495	COG0738	Major facilitator superfamily
ATE47_RS10525	COG3876	Protein conserved in bacteria
ATE47_RS10560	COG1301	dicarboxylic acid transport
ATE47_RS10570	COG4771	TonB-dependent receptor
ATE47_RS10575	COG3425	synthase
ATE47_RS10625	COG5002	protein histidine kinase activity
ATE47_RS10630	COG0745	RESPONSE REGULATOR receiver
ATE47_RS10650	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ATE47_RS10660	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ATE47_RS10690	COG2356	endonuclease I
ATE47_RS10710	COG0295	cytidine deaminase activity
ATE47_RS10725	COG0517	IMP dehydrogenase activity
ATE47_RS10725	COG0617	tRNA 3'-terminal CCA addition
ATE47_RS10725	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ATE47_RS10730	COG0009	L-threonylcarbamoyladenylate synthase
ATE47_RS10755	COG0626	cystathionine gamma-synthase activity
ATE47_RS10775	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ATE47_RS10780	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ATE47_RS10790	COG2732	(Barnase) inhibitor
ATE47_RS10810	COG1524	type I phosphodiesterase nucleotide pyrophosphatase
ATE47_RS10835	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
ATE47_RS10850	COG0596	Alpha beta hydrolase
ATE47_RS10865	COG4251	negative regulation of phosphorylation
ATE47_RS10885	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ATE47_RS10905	COG4191	Histidine kinase
ATE47_RS10915	COG2989	Protein conserved in bacteria
ATE47_RS10935	COG1127	ABC transporter
ATE47_RS10945	COG0471	metal ion transport
ATE47_RS10965	COG2010	Cytochrome c
ATE47_RS10975	COG3620	sequence-specific DNA binding
ATE47_RS10980	COG0443	Heat shock 70 kDa protein
ATE47_RS10985	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ATE47_RS10990	COG0248	Ppx GppA phosphatase
ATE47_RS11015	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ATE47_RS11020	COG0489	protein tyrosine kinase activity
ATE47_RS11025	COG3537	Alpha-1,2-mannosidase
ATE47_RS11035	COG1301	dicarboxylic acid transport
ATE47_RS11070	COG0010	Belongs to the arginase family
ATE47_RS11075	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ATE47_RS11085	COG2365	Tyrosine phosphatase family
ATE47_RS11105	COG2378	regulation of single-species biofilm formation
ATE47_RS11110	COG1132	(ABC) transporter
ATE47_RS11115	COG1137	ATPase activity
ATE47_RS11130	COG1078	dGTPase activity
ATE47_RS11135	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATE47_RS11140	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ATE47_RS11140	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATE47_RS11155	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ATE47_RS11160	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATE47_RS11165	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ATE47_RS11175	COG1668	transmembrane transport
ATE47_RS11180	COG4152	abc transporter atp-binding protein
ATE47_RS11190	COG0113	porphobilinogen synthase activity
ATE47_RS11215	COG0708	Exodeoxyribonuclease III
ATE47_RS11220	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ATE47_RS11235	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ATE47_RS11250	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATE47_RS11280	COG1086	Polysaccharide biosynthesis protein
ATE47_RS11285	COG0367	asparagine synthase
ATE47_RS11295	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ATE47_RS11300	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ATE47_RS11330	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS11350	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATE47_RS11365	COG0673	inositol 2-dehydrogenase activity
ATE47_RS11380	COG0579	oxidoreductase
ATE47_RS11385	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ATE47_RS11405	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ATE47_RS11410	COG2137	regulation of response to DNA damage stimulus
ATE47_RS11415	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ATE47_RS11420	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ATE47_RS11430	COG0640	Transcriptional regulator
ATE47_RS11435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ATE47_RS11445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ATE47_RS11450	COG1136	(ABC) transporter
ATE47_RS11450	COG0577	efflux transmembrane transporter activity
ATE47_RS11455	COG0577	efflux transmembrane transporter activity
ATE47_RS11455	COG1136	(ABC) transporter
ATE47_RS11460	COG1136	(ABC) transporter
ATE47_RS11500	COG1418	mRNA catabolic process
ATE47_RS11510	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ATE47_RS11520	COG0525	valine-tRNA ligase activity
ATE47_RS11530	COG2326	polyphosphate kinase activity
ATE47_RS11555	COG0017	Asparaginyl-tRNA synthetase
ATE47_RS11560	COG4977	sequence-specific DNA binding
ATE47_RS11570	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ATE47_RS11575	COG0228	four-way junction DNA binding
ATE47_RS11595	COG0339	signal peptide processing
ATE47_RS11620	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ATE47_RS11630	COG0259	pyridoxamine-phosphate oxidase activity
ATE47_RS11635	COG1678	Uncharacterized ACR, COG1678
ATE47_RS11640	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATE47_RS11655	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATE47_RS11670	COG3158	transport of potassium into the cell
ATE47_RS11675	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATE47_RS11675	COG0022	dehydrogenase e1 component
ATE47_RS11700	COG1183	phosphatidylcholine synthase activity
ATE47_RS11745	COG0544	peptidyl-prolyl cis-trans isomerase activity
ATE47_RS11775	COG0488	(ABC) transporter
ATE47_RS11795	COG4585	Histidine kinase
ATE47_RS11815	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ATE47_RS11830	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATE47_RS11835	COG0720	synthase
ATE47_RS11845	COG1040	competence protein
ATE47_RS11855	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ATE47_RS11860	COG1160	GTP binding
ATE47_RS11945	COG1278	Cold shock
ATE47_RS11970	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
ATE47_RS11995	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ATE47_RS12020	COG0436	Aminotransferase
ATE47_RS12030	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ATE47_RS12040	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ATE47_RS12045	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ATE47_RS12050	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ATE47_RS12055	COG0552	protein localization to endoplasmic reticulum
ATE47_RS12060	COG2261	transglycosylase associated protein
ATE47_RS12065	COG0616	signal peptide processing
ATE47_RS12090	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ATE47_RS12095	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ATE47_RS12095	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ATE47_RS12100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ATE47_RS12110	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ATE47_RS12120	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ATE47_RS12140	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ATE47_RS12160	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATE47_RS12220	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ATE47_RS12225	COG1561	YicC-like family, N-terminal region
ATE47_RS12230	COG0194	GDP metabolic process
ATE47_RS12235	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ATE47_RS12245	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ATE47_RS12495	COG1215	transferase activity, transferring glycosyl groups
ATE47_RS12520	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ATE47_RS12540	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ATE47_RS12540	COG0284	orotidine-5'-phosphate decarboxylase activity
ATE47_RS12575	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ATE47_RS12580	COG1522	sequence-specific DNA binding
ATE47_RS12590	COG0336	Belongs to the RNA methyltransferase TrmD family
ATE47_RS12595	COG1252	NADH dehydrogenase
ATE47_RS12615	COG0488	(ABC) transporter
ATE47_RS12620	COG0673	inositol 2-dehydrogenase activity
ATE47_RS12625	COG4774	siderophore transport
ATE47_RS12640	COG0450	alkyl hydroperoxide reductase
ATE47_RS12655	COG0045	succinate-CoA ligase (ADP-forming) activity
ATE47_RS12660	COG0038	chloride channel
ATE47_RS12665	COG2363	Small membrane protein
ATE47_RS12680	COG0632	four-way junction helicase activity
ATE47_RS12690	COG0205	6-phosphofructokinase activity
ATE47_RS12695	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ATE47_RS12720	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ATE47_RS12725	COG0326	Molecular chaperone. Has ATPase activity
ATE47_RS12745	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATE47_RS12750	COG0318	PFAM AMP-dependent synthetase and ligase
ATE47_RS12780	COG0018	arginyl-trna synthetase
ATE47_RS12790	COG4771	TonB-dependent receptor
ATE47_RS12800	COG1629	transport
ATE47_RS12800	COG4206	TonB-dependent receptor
ATE47_RS12805	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ATE47_RS12810	COG0706	membrane insertase activity
ATE47_RS12815	COG0504	CTP synthase activity
ATE47_RS12825	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ATE47_RS12885	COG2851	Citrate transporter
ATE47_RS12890	COG1301	dicarboxylic acid transport
ATE47_RS12895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ATE47_RS12900	COG0459	protein refolding
ATE47_RS12915	COG2318	DinB family
ATE47_RS12930	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ATE47_RS12950	COG4941	Belongs to the sigma-70 factor family
ATE47_RS12960	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ATE47_RS12980	COG0477	Major facilitator Superfamily
ATE47_RS12995	COG1132	(ABC) transporter
ATE47_RS13015	COG0101	tRNA pseudouridine synthase activity
ATE47_RS13020	COG1663	tetraacyldisaccharide 4'-kinase activity
ATE47_RS13030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ATE47_RS13035	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ATE47_RS13040	COG0366	Alpha amylase catalytic
ATE47_RS13045	COG2272	Belongs to the type-B carboxylesterase lipase family
ATE47_RS13050	COG1733	regulation of RNA biosynthetic process
ATE47_RS13120	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ATE47_RS13125	COG0085	RNA polymerase activity
ATE47_RS13130	COG0222	ribosome binding
ATE47_RS13135	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ATE47_RS13140	COG0081	regulation of translation
ATE47_RS13145	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ATE47_RS13170	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ATE47_RS13250	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ATE47_RS13275	COG4221	oxidoreductase activity
ATE47_RS13280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATE47_RS13285	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATE47_RS13290	COG0571	ribonuclease III activity
ATE47_RS13300	COG0469	pyruvate kinase activity
ATE47_RS13305	COG1012	belongs to the aldehyde dehydrogenase family
ATE47_RS13310	COG0010	Belongs to the arginase family
ATE47_RS13320	COG1228	amidohydrolase
ATE47_RS13325	COG2255	four-way junction helicase activity
ATE47_RS13330	COG2808	Putative FMN-binding domain
ATE47_RS13335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATE47_RS13340	COG0237	dephospho-CoA kinase activity
ATE47_RS13380	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ATE47_RS13390	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ATE47_RS13395	COG1053	succinate dehydrogenase
ATE47_RS13405	COG2333	competence protein COMEC
ATE47_RS13405	COG0658	competence protein
ATE47_RS13410	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ATE47_RS13425	COG0534	Mate efflux family protein
ATE47_RS13435	COG1595	DNA-templated transcription, initiation
ATE47_RS13445	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ATE47_RS13460	COG0071	Belongs to the small heat shock protein (HSP20) family
ATE47_RS13470	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
ATE47_RS13480	COG3285	dna ligase
ATE47_RS13480	COG1793	dna ligase
ATE47_RS13490	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS13495	COG1862	Preprotein translocase
ATE47_RS13505	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ATE47_RS13510	COG1132	(ABC) transporter
ATE47_RS13525	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ATE47_RS13565	COG0495	leucyl-tRNA aminoacylation
ATE47_RS13580	COG1215	transferase activity, transferring glycosyl groups
ATE47_RS13590	COG1519	Transferase
ATE47_RS13615	COG0037	tRNA processing
ATE47_RS13635	COG0508	dehydrogenase complex catalyzes the overall conversion of
ATE47_RS13635	COG0596	Alpha beta hydrolase
ATE47_RS13645	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ATE47_RS13650	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ATE47_RS13655	COG2884	Cell division ATP-binding protein ftsE
ATE47_RS13660	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ATE47_RS13665	COG5000	phosphorelay sensor kinase activity
ATE47_RS13675	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ATE47_RS13685	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ATE47_RS13690	COG0511	ligase activity, forming carbon-carbon bonds
ATE47_RS13695	COG0439	Biotin carboxylase
ATE47_RS13700	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ATE47_RS13705	COG0463	Glycosyl transferase, family 2
ATE47_RS13755	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ATE47_RS13760	COG0825	malonyl-CoA metabolic process
ATE47_RS13770	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ATE47_RS13820	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ATE47_RS13835	COG0052	Belongs to the universal ribosomal protein uS2 family
ATE47_RS13840	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ATE47_RS13845	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ATE47_RS13860	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS13860	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS13860	COG1703	isobutyryl-CoA mutase activity
ATE47_RS13895	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ATE47_RS13930	COG4249	Peptidase C14 caspase catalytic subunit p20
ATE47_RS13940	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ATE47_RS13940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ATE47_RS13945	COG0516	GMP reductase activity
ATE47_RS13945	COG0517	IMP dehydrogenase activity
ATE47_RS13965	COG1595	DNA-templated transcription, initiation
ATE47_RS13975	COG0254	rRNA binding
ATE47_RS13990	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ATE47_RS13995	COG0300	oxidoreductase activity
ATE47_RS14010	COG1629	transport
ATE47_RS14075	COG0509	glycine decarboxylation via glycine cleavage system
ATE47_RS14085	COG0632	four-way junction helicase activity
ATE47_RS14095	COG0281	malic enzyme
ATE47_RS14095	COG0280	phosphate acetyltransferase
ATE47_RS14140	COG1505	serine-type exopeptidase activity
ATE47_RS14230	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ATE47_RS14240	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ATE47_RS14250	COG1490	D-aminoacyl-tRNA deacylase activity
ATE47_RS14340	COG2030	dehydratase
ATE47_RS14340	COG1012	belongs to the aldehyde dehydrogenase family
ATE47_RS14355	COG0183	Belongs to the thiolase family
ATE47_RS14370	COG1250	3-hydroxyacyl-CoA dehydrogenase
ATE47_RS14375	COG1024	Enoyl-CoA hydratase
ATE47_RS14380	COG2151	metal-sulfur cluster biosynthetic enzyme
ATE47_RS14390	COG3460	Phenylacetate-CoA oxygenase
ATE47_RS14400	COG3396	Phenylacetate-CoA oxygenase
ATE47_RS14405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ATE47_RS14410	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ATE47_RS14415	COG1309	transcriptional regulator
ATE47_RS14420	COG0542	response to heat
ATE47_RS14435	COG4585	Histidine kinase
ATE47_RS14485	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS14505	COG3537	Alpha-1,2-mannosidase
ATE47_RS14510	COG0667	Aldo Keto reductase
ATE47_RS14520	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ATE47_RS14545	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ATE47_RS14565	COG0194	GDP metabolic process
ATE47_RS14570	COG1472	Belongs to the glycosyl hydrolase 3 family
ATE47_RS14575	COG0438	transferase activity, transferring glycosyl groups
ATE47_RS14610	COG1074	ATP-dependent DNA helicase activity
ATE47_RS14620	COG1528	Iron-storage protein
ATE47_RS14635	COG1640	4-alpha-glucanotransferase
ATE47_RS14645	COG0215	cysteine-tRNA ligase activity
ATE47_RS14655	COG0302	gtp cyclohydrolase
ATE47_RS14665	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ATE47_RS14670	COG0646	methionine synthase
ATE47_RS14670	COG1410	methionine synthase
ATE47_RS14680	COG0646	methionine synthase
ATE47_RS14680	COG1410	methionine synthase
ATE47_RS14690	COG0460	homoserine dehydrogenase
ATE47_RS14690	COG0527	aspartate kinase activity
ATE47_RS14695	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ATE47_RS14725	COG0714	Associated with various cellular activities
ATE47_RS14770	COG0217	transcriptional regulatory protein
ATE47_RS14775	COG2885	chlorophyll binding
ATE47_RS14780	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ATE47_RS14785	COG0488	(ABC) transporter
ATE47_RS14790	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ATE47_RS14790	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ATE47_RS14795	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ATE47_RS14860	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ATE47_RS14875	COG1834	amidinotransferase
ATE47_RS14900	COG0148	phosphopyruvate hydratase activity
ATE47_RS14915	COG4585	Histidine kinase
ATE47_RS14930	COG2197	response regulator
ATE47_RS14945	COG0203	ribosomal protein L17
ATE47_RS14950	COG0202	RNA polymerase activity
ATE47_RS14955	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ATE47_RS14960	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ATE47_RS14965	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ATE47_RS14970	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ATE47_RS14980	COG0200	Binds to the 23S rRNA
ATE47_RS14985	COG1841	ribosomal large subunit assembly
ATE47_RS14990	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ATE47_RS14995	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ATE47_RS15000	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ATE47_RS15005	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ATE47_RS15010	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ATE47_RS15015	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ATE47_RS15025	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ATE47_RS15030	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ATE47_RS15035	COG0255	Belongs to the universal ribosomal protein uL29 family
ATE47_RS15040	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ATE47_RS15045	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ATE47_RS15050	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ATE47_RS15055	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ATE47_RS15060	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ATE47_RS15070	COG0088	Forms part of the polypeptide exit tunnel
ATE47_RS15075	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ATE47_RS15080	COG1349	DNA-binding transcription factor activity
ATE47_RS15085	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ATE47_RS15090	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ATE47_RS15095	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ATE47_RS15140	COG0051	transcription antitermination factor activity, RNA binding
ATE47_RS15145	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ATE47_RS15150	COG0049	tRNA binding
ATE47_RS15155	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ATE47_RS15165	COG0783	Belongs to the Dps family
ATE47_RS15170	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ATE47_RS15195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ATE47_RS15220	COG1054	Belongs to the UPF0176 family
ATE47_RS15225	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ATE47_RS15255	COG0251	oxidation-reduction process
ATE47_RS15265	COG0860	N-Acetylmuramoyl-L-alanine amidase
ATE47_RS15280	COG0268	Binds directly to 16S ribosomal RNA
ATE47_RS15340	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ATE47_RS15345	COG1999	signal sequence binding
ATE47_RS15360	COG2217	Heavy metal translocating P-type atpase
ATE47_RS15400	COG4771	TonB-dependent receptor
ATE47_RS15405	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ATE47_RS15410	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ATE47_RS15430	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
ATE47_RS15450	COG4771	TonB-dependent receptor
ATE47_RS15460	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ATE47_RS15465	COG0195	Participates in both transcription termination and antitermination
ATE47_RS15470	COG0779	Required for maturation of 30S ribosomal subunits
ATE47_RS15475	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ATE47_RS15530	COG1215	transferase activity, transferring glycosyl groups
ATE47_RS15550	COG0463	Glycosyl transferase, family 2
ATE47_RS15560	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ATE47_RS15565	COG2226	methyltransferase
ATE47_RS15575	COG0367	asparagine synthase
ATE47_RS15580	COG0463	Glycosyl transferase, family 2
ATE47_RS15585	COG0463	Glycosyl transferase, family 2
ATE47_RS15590	COG0463	Glycosyl transferase, family 2
ATE47_RS15605	COG0463	Glycosyl transferase, family 2
ATE47_RS15615	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ATE47_RS15640	COG0110	maltose O-acetyltransferase activity
ATE47_RS15645	COG0288	reversible hydration of carbon dioxide
ATE47_RS15655	COG0659	secondary active sulfate transmembrane transporter activity
ATE47_RS15670	COG0193	aminoacyl-tRNA hydrolase activity
ATE47_RS15700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ATE47_RS15740	COG0305	Participates in initiation and elongation during chromosome replication
ATE47_RS15745	COG0328	RNA-DNA hybrid ribonuclease activity
ATE47_RS15765	COG0778	Nitroreductase
ATE47_RS15775	COG0157	Belongs to the NadC ModD family
ATE47_RS15790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ATE47_RS15835	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ATE47_RS15840	COG1611	Belongs to the LOG family
ATE47_RS15895	COG1132	(ABC) transporter
ATE47_RS15905	COG0688	phosphatidylethanolamine metabolic process
ATE47_RS15920	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ATE47_RS15925	COG0799	negative regulation of ribosome biogenesis
ATE47_RS15930	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ATE47_RS15930	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ATE47_RS15940	COG0343	queuine tRNA-ribosyltransferase activity
ATE47_RS15950	COG0463	Glycosyl transferase, family 2
ATE47_RS15965	COG1770	oligopeptidase
ATE47_RS16005	COG2207	Transcriptional regulator
ATE47_RS16005	COG0662	Cupin 2, conserved barrel domain protein
ATE47_RS16010	COG1764	response to oxidative stress
ATE47_RS16020	COG0183	Belongs to the thiolase family
ATE47_RS16030	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATE47_RS16040	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ATE47_RS16045	COG2733	membrane
ATE47_RS16055	COG0167	dihydroorotate dehydrogenase activity
ATE47_RS16060	COG0564	pseudouridine synthase activity
ATE47_RS16065	COG0423	glycine-tRNA ligase activity
ATE47_RS16080	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ATE47_RS16085	COG1876	peptidase activity
ATE47_RS16090	COG3621	Patatin-like phospholipase
ATE47_RS16160	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ATE47_RS16210	COG0791	NLP P60 protein
ATE47_RS16220	COG0772	Belongs to the SEDS family
ATE47_RS16225	COG0768	penicillin binding
ATE47_RS16245	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ATE47_RS16250	COG0181	hydroxymethylbilane synthase activity
ATE47_RS16265	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ATE47_RS16275	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ATE47_RS16280	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ATE47_RS16295	COG1774	PSP1 C-terminal conserved region
ATE47_RS16310	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ATE47_RS16335	COG0437	4 iron, 4 sulfur cluster binding
ATE47_RS16375	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ATE47_RS16385	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ATE47_RS16390	COG1368	sulfuric ester hydrolase activity
ATE47_RS16395	COG2321	neutral zinc metallopeptidase
ATE47_RS16405	COG0316	Belongs to the HesB IscA family
ATE47_RS16410	COG0719	Fe-S assembly protein
ATE47_RS16420	COG0396	ATPase activity
ATE47_RS16425	COG0719	Fe-S assembly protein
ATE47_RS16450	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ATE47_RS16490	COG0387	Pfam Sodium calcium exchanger
ATE47_RS16535	COG0758	DNA mediated transformation
ATE47_RS16555	COG3591	Belongs to the peptidase S1B family
ATE47_RS16565	COG0606	chelatase, subunit chli
ATE47_RS16570	COG3227	Zinc metalloprotease (Elastase)
ATE47_RS16585	COG1595	DNA-templated transcription, initiation
ATE47_RS16600	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ATE47_RS16615	COG2151	metal-sulfur cluster biosynthetic enzyme
ATE47_RS16640	COG2195	Cleaves the N-terminal amino acid of tripeptides
ATE47_RS16660	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ATE47_RS16670	COG2081	HI0933 family
ATE47_RS16710	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ATE47_RS16725	COG3781	membrane
ATE47_RS16730	COG3397	chitin binding
ATE47_RS16750	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ATE47_RS16760	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ATE47_RS16770	COG2715	membrane protein required for spore maturation
ATE47_RS16795	COG0811	peptide transport
ATE47_RS16825	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ATE47_RS16830	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ATE47_RS16835	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ATE47_RS16880	COG2166	iron-sulfur cluster assembly
ATE47_RS16905	COG0482	sulfurtransferase activity
ATE47_RS16935	COG3279	Response regulator of the LytR AlgR family
ATE47_RS16960	COG3275	phosphorelay sensor kinase activity
ATE47_RS16975	COG2032	superoxide dismutase activity
ATE47_RS16980	COG0793	Belongs to the peptidase S41A family
ATE47_RS16985	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ATE47_RS17005	COG0516	GMP reductase activity
ATE47_RS17020	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS17030	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ATE47_RS17040	COG1435	thymidine kinase activity
ATE47_RS17045	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ATE47_RS17055	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ATE47_RS17060	COG0445	tRNA wobble uridine modification
ATE47_RS17070	COG0126	phosphoglycerate kinase activity
ATE47_RS17075	COG0698	ribose 5-phosphate isomerase
ATE47_RS17080	COG0557	exoribonuclease II activity
ATE47_RS17090	COG1619	proteins homologs of microcin C7 resistance protein MccF
ATE47_RS17095	COG0792	nuclease activity
ATE47_RS17100	COG4221	oxidoreductase activity
ATE47_RS17105	COG1214	PFAM Peptidase M22, glycoprotease
ATE47_RS17115	COG0424	maF-like protein
ATE47_RS17120	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ATE47_RS17130	COG1595	DNA-templated transcription, initiation
ATE47_RS17155	COG3537	Alpha-1,2-mannosidase
ATE47_RS17160	COG0481	GTPase activity
ATE47_RS17190	COG1629	transport
ATE47_RS17190	COG4771	TonB-dependent receptor
ATE47_RS17195	COG3172	ATPase kinase involved in NAD metabolism
ATE47_RS17200	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ATE47_RS17205	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
ATE47_RS17260	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ATE47_RS17275	COG0697	spore germination
ATE47_RS17280	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ATE47_RS17305	COG0745	RESPONSE REGULATOR receiver
ATE47_RS17330	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ATE47_RS17370	COG1610	YqeY-like protein
ATE47_RS17375	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ATE47_RS17390	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ATE47_RS17400	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ATE47_RS17410	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ATE47_RS17415	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATE47_RS17420	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ATE47_RS17425	COG0768	penicillin binding
ATE47_RS17435	COG0275	rRNA processing
ATE47_RS17440	COG2001	Belongs to the MraZ family
ATE47_RS17445	COG2267	carboxylic ester hydrolase activity
ATE47_RS17450	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ATE47_RS17455	COG2153	protein acetylation
ATE47_RS17480	COG2314	TM2 domain
ATE47_RS17535	COG1629	transport
ATE47_RS17535	COG4206	TonB-dependent receptor
ATE47_RS17545	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ATE47_RS17550	COG1940	carbohydrate kinase activity
ATE47_RS17580	COG0653	protein targeting
ATE47_RS17590	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ATE47_RS17625	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ATE47_RS17655	COG3530	Putative quorum-sensing-regulated virulence factor
ATE47_RS17660	COG0556	nucleotide-excision repair
ATE47_RS17670	COG2133	pyrroloquinoline quinone binding
ATE47_RS17685	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ATE47_RS17715	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ATE47_RS17720	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ATE47_RS17760	COG3118	belongs to the thioredoxin family
ATE47_RS17770	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ATE47_RS17770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ATE47_RS17780	COG0433	COG0433 Predicted ATPase
ATE47_RS17785	COG2176	DNA-directed DNA polymerase activity
ATE47_RS17800	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ATE47_RS17805	COG4804	nuclease activity
ATE47_RS17815	COG3829	transcription factor binding
ATE47_RS17845	COG0594	ribonuclease P activity
ATE47_RS17850	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ATE47_RS17885	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ATE47_RS17895	COG0497	DNA recombination
ATE47_RS17930	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ATE47_RS17930	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ATE47_RS17945	COG2207	Transcriptional regulator
ATE47_RS17955	COG1764	response to oxidative stress
ATE47_RS17980	COG1960	acyl-CoA dehydrogenase activity
ATE47_RS17995	COG0166	Belongs to the GPI family
ATE47_RS18010	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ATE47_RS18015	COG0602	queuosine metabolic process
ATE47_RS18020	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ATE47_RS18025	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ATE47_RS18055	COG1703	isobutyryl-CoA mutase activity
ATE47_RS18065	COG3005	denitrification pathway
ATE47_RS18070	COG4948	Mandelate Racemase Muconate Lactonizing
ATE47_RS18080	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ATE47_RS18090	COG1690	Belongs to the RtcB family
ATE47_RS18100	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS18100	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ATE47_RS18105	COG1505	serine-type exopeptidase activity
ATE47_RS18110	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ATE47_RS18115	COG0531	amino acid
ATE47_RS18125	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ATE47_RS18140	COG2181	nitrate reductase activity
ATE47_RS18140	COG0247	lactate metabolic process
ATE47_RS18150	COG2181	nitrate reductase activity
ATE47_RS18150	COG0247	lactate metabolic process
ATE47_RS18175	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ATE47_RS18190	COG0348	domain, Protein
ATE47_RS18215	COG2217	Heavy metal translocating P-type atpase
ATE47_RS18220	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ATE47_RS18225	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ATE47_RS18235	COG0564	pseudouridine synthase activity
ATE47_RS18255	COG0351	phosphomethylpyrimidine kinase
ATE47_RS18260	COG0352	thiamine-phosphate diphosphorylase activity
ATE47_RS18265	COG2022	thiamine diphosphate biosynthetic process
ATE47_RS18290	COG1755	Isoprenylcysteine carboxyl methyltransferase
ATE47_RS18295	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ATE47_RS18315	COG1607	acyl-coa hydrolase
ATE47_RS18325	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ATE47_RS18330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ATE47_RS18350	COG4974	Belongs to the 'phage' integrase family
ATE47_RS18360	COG1024	Enoyl-CoA hydratase
ATE47_RS18375	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ATE47_RS18395	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ATE47_RS18400	COG1335	isochorismatase
ATE47_RS18405	COG1733	regulation of RNA biosynthetic process
ATE47_RS18410	COG0180	Tryptophanyl-tRNA synthetase
ATE47_RS18415	COG2949	membrane
ATE47_RS18420	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ATE47_RS18435	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ATE47_RS18440	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ATE47_RS18445	COG0739	heme binding
ATE47_RS18450	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ATE47_RS18465	COG2986	histidine ammonia-lyase
ATE47_RS18470	COG1028	Short-chain dehydrogenase reductase Sdr
ATE47_RS18475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATE47_RS18480	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATE47_RS18490	COG0644	oxidoreductase
ATE47_RS18515	COG1216	Glycosyl transferase, family 2
ATE47_RS18525	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATE47_RS18550	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATE47_RS18555	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ATE47_RS18565	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ATE47_RS18580	COG1131	(ABC) transporter
ATE47_RS18600	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ATE47_RS18605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ATE47_RS18615	COG2409	Drug exporters of the RND superfamily
ATE47_RS18655	COG1216	Glycosyl transferase, family 2
ATE47_RS18655	COG1442	glycosyl transferase family 8
ATE47_RS18660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ATE47_RS18680	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ATE47_RS18705	COG1091	dTDP-4-dehydrorhamnose reductase activity